HAU0423, HAU0423 (genetic_marker) gossypium spp

Marker Overview
NameHAU0423
Genbank IDBG442112
TypeSSR
SpeciesGossypium spp.
Source SequenceBG442112
Source TypeEST
Repeat Motif(TCC)8
PCR ConditionAnnealing temperature: 57.3
Primer 1HAU0423_F: CGATGGAAGAAAAATCGAAA
Primer 2HAU0423_R: ATATTTCGACCAAGGAGTCG
Product Length198
PolymorphismP_ HAU0423
Publication[view all]
CommentPrimer data obtained in 2012
Cross References
External references for this genetic_marker
DatabaseAccession
DB:genbankBG442112
Relationships

The following sequence_feature feature(s) derives from this genetic_marker:

Feature NameUnique NameSpeciesType
BG442112BG442112Gossypium spp.sequence_feature


Map Positions
#Map NameLinkage GroupBinPositionLocusMapViewer
1GX1135 x GX100-2, F2 (2013)AD_ch11_At.11N/A87.3HAU423View
2GX1135 x GX100-2, RIL (2015)AD_ch21_Dt.11N/A187.8HAU0423View
3GX1135 x GX100-2, RIL (2016)AD_ch21_Dt.11N/A187.8HAU0423View
4GX1135 x VGX100-2, RIL (2016)AD_ch21_Dt.11N/A21.5HAU0423View
5CCRI 12-4 x (AD)5-7, F2 (2015)AD_ch11_At.11N/A35.9HAU0423View
Sequence
>HAU0423 ID=HAU0423; Name=HAU0423; organism=Gossypium spp.; type=genetic_marker; length=198bp
CGATGGAAGAAAAATCGAAAATCAGTCTGCTCTTTTCCTCCTCCGTCCTC
CTCCTCCTCTTTTCTCTCTCCGCGGCTGTTTCCAACCCTTTACAGCTGCA
AACCTTACTTCTCCGCCCTCTTCCTTCTGCGCCCACTCTTTCATGGACAG
ATGCCGAACCCGAACCCGAACCCGAATCCGACTCCTTGGTCGAAATAT