NAU3995, NAU3995 (genetic_marker) Gossypium raimondii

Marker Overview
NameNAU3995
AliasNAU1167=NAU3995
Genbank IDCO128067
TypeSSR
SpeciesGossypium raimondii
Source TypeEST
Repeat Motif(gatagg)5
PCR ConditionAnnealing temperature: 57
Primer 1NAU3995_F: CTGACTTGGACCGAGAACTT
Primer 2NAU3995_R: AAGAGCCCTGGACAATGATA
Restriction EnzymeNotI; EcoRV
Publication[view all]
ContactZhang, Tian-Zhen
CommentPrimer data obtained in 2007-05
Contact
NameDetails
Zhang, Tian-Zhen
First name:Tian-Zhen
Last name:Zhang
Title:Professor
Institution:Zhejiang University
Address:College of Agriculture and Biotechnology, Zhejiang University, Hangzhou , 310058 , Zhejiang , China
Country:China
Email:cotton@zju.edu.cn
Phone:+86 571 88982971
Fax:+86 571 88982971
Keywords:cotton genetics and genomics, and breeding
Last update:18-Mar-2022
Cross References
External references for this genetic_marker
DatabaseAccession
DB:genbankCO128067
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Chr03chromosomeNAU3995:14..838 .
Chr03:42318781..42319605 -
Chr3chromosomeNAU3995:14..838 .
Chr3:2570109..2570933 +
Map Positions
#Map NameLinkage GroupBinPositionLocusMapViewer
1AD-genome wide Reference Map (2009)AD_ch03_At.03N/A12nau3995View
2Zhongmiansuo-12 x 8891, RIL (2007)AD_chUN/A0.3nau3995View
3Yumian-1 x 7235, RIL (2015)AD_ch17_Dt.03N/A82.8nau3995View
4W10 x TM-1, F2:3 (2015)AD_ch17_Dt.03N/A0nau3995View
5GX1135 x VGX100-2, RIL (2016)AD_ch17_Dt.03N/A0nau3995View
6CCRI 12-4 x (AD)5-7, F2 (2015)AD_ch17_Dt.03N/A30.9nau3995View
7SG 747 x Giza 75, BIL (2013)AD_ch05_At.05N/A49.4nau3995View
8CCRI-35 x Yumian-1, RIL (2015)AD_ch17_Dt.03N/A55.1nau3995View
9LMY22 x LY343, RIL (2016)chr.17N/A0.6nau3995View
10LMY22 x LY343, RIL (2020)D03N/A71.65nau3995View
11TM-1 x Hai-7124, BC1 (2008)AD_ch03_At.03N/A104.82NAU3995-200View
12TM-1 x Hai-7124, BC1 (2007)AD_ch03_At.03N/A107NAU3995-200View
13TM-1 x Hai-7124, BC1 (2012)AD_ch03_At.03N/A102NAU3995-200View
14TM-1 x (TX-0256 + TX-1046), CSIL (2016)AD_ch03_At.03N/A83.7NAU3995aView
15GX1135 x GX100-2, F2 (2013)AD_ch03_At.03N/A59.6NAU3995aView
16GX1135 x GX100-2, RIL (2016)AD_ch17_Dt.03N/A12.2NAU3995aView
17SG 747 x Giza 75, BIL (2013)AD_ch03_At.03N/A99.6NAU3995aView
18TM-1 x (TX-0256 + TX-1046), CSIL (2016)AD_ch17_Dt.03N/A87.5NAU3995bView
19GX1135 x GX100-2, F2 (2013)AD_ch17_Dt.03N/A20.5NAU3995bView
20GX1135 x GX100-2, RIL (2016)AD_ch03_At.03N/A119.5NAU3995bView
21TM-1 x (TX-0256 + TX-1046), CSIL (2016)AD_ch17_Dt.03N/A91.2NAU3995cView
22CCRI 12-4 x (AD)5-7, F2 (2015)AD_ch17_Dt.03N/A82NAU3995View
23CCRI-35 x Yumian-1, RIL (2017)AD_ch17_Dt.03N/A87.47NAU3995View