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Marker Overview
| Name | NAU2580 |
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| Alias | NAU2580=HAU0862
HAU0862
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| Genbank ID | CO070974 |
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| Type | SSR |
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| Species | Gossypium raimondii |
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| Source Type | EST |
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| Repeat Motif | (tca)5(tct)5 |
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| PCR Condition | Annealing temperature: 57 |
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| Primer 1 | NAU2580_F: CCTTCTCCTTCTCCTCCTTC |
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| Primer 2 | NAU2580_R: CACAGACGCTTACCTCACAC |
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| Restriction Enzyme | NotI; EcoRV |
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| Publication | [view all] |
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| Contact | Zhang, Tian-Zhen
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| Comment | Primer data obtained in 2007-05 |
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Cross References
External references for this genetic_marker
Publications
| Year | Publication |
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| 2007 | Guo W, Cai C, Wang C, Han Z, Song X, Wang K, Niu X, Wang C, Lu K, Shi B. A microsatellite-based, gene-rich linkage map reveals genome structure, function and evolution in Gossypium. Genetics. 2007; 176(1):527-541. |
Map Positions
| # | Map Name | Linkage Group | Bin | Position | Locus | MapViewer |
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| 1 | JLZM x ZJXSLS, F2 (2008) | A_JZ_A06 | N/A | 96.6 | NAU2580 | View |
| 2 | AD-genome wide Reference Map (2009) | AD_ch25_Dt.06 | N/A | 152 | NAU2580 | View |
| 3 | AD-genome wide Reference Map (2009) | AD_ch06_At.06 | N/A | 171 | NAU2580 | View |
| 4 | 60182 x Jun Mian 1, F2:3 (2007) | AD_ch23_Dt.09 | N/A | 15.4 | NAU2580 | View |
| 5 | Yumian-1 x 7235, RIL (2015) | AD_ch25_Dt.06 | N/A | 25.1 | NAU2580 | View |
| 6 | TM-1 x (TX-0256 + TX-1046), CSIL (2016) | AD_ch15_Dt.01 | N/A | 9.7 | NAU2580 | View |
| 7 | TM-1 x Hai-7124, BC1 (2007) | AD_ch06_At.06 | N/A | 105 | NAU2580-650 | View |
| 8 | TM-1 x Hai-7124, BC1 (2008) | AD_ch06_At.06 | N/A | 52.12 | NAU2580-650 | View |
| 9 | TM-1 x Hai-7124, BC1 (2012) | AD_ch06_At.06 | N/A | 65.1 | NAU2580-650 | View |
| 10 | TM-1 x Hai-7124, BC1 (2007) | AD_ch25_Dt.06 | N/A | 92.6 | NAU2580-870 | View |
| 11 | TM-1 x Hai-7124, BC1 (2008) | AD_ch25_Dt.06 | N/A | 48.92 | NAU2580-870 | View |
| 12 | TM-1 x Hai-7124, BC1 (2012) | AD_ch25_Dt.06 | N/A | 61.4 | NAU2580-870 | View |
| 13 | PD 94042 x (AD)4-08, F2 (2016) | AD_ch06_At.06 | N/A | 167.3 | NAU2580 | View |
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