NAU1071, NAU1071 (genetic_marker) Gossypium arboreum

Marker Overview
NameNAU1071
Genbank IDBQ402528
TypeSSR
SpeciesGossypium arboreum
GermplasmAKA 8400
AKA 8400
Source TypeEST
Repeat Motif(TTC)10
PCR ConditionAnnealing temperature: 57
Primer 1NAU1071_F: ACCAACAATGGTGACCTCTT
Primer 2NAU1071_R: CCCTCCATAACCAAAAGTTG
Product Length173
Restriction EnzymeEcoRI; XhoI
ContactZhang, Tian-Zhen
CommentPrimer data obtained in 2007-05
Contact
NameDetails
Zhang, Tian-Zhen
First name:Tian-Zhen
Last name:Zhang
Title:Professor
Institution:Zhejiang University
Address:College of Agriculture and Biotechnology, Zhejiang University, Hangzhou , 310058 , Zhejiang , China
Country:China
Email:cotton@zju.edu.cn
Phone:+86 571 88982971
Fax:+86 571 88982971
Keywords:cotton genetics and genomics, and breeding
Last update:18-Mar-2022
Cross References
External references for this genetic_marker
DatabaseAccession
DB:genbankBQ402528
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Chr05chromosomeNAU1071:1..656 .
Chr05:58987191..58987839 +
Chr5chromosomeNAU1071:1..656 .
Chr5:38609350..38609998 -
Germplasm
Stock NameType
AKA 8400accession
AKA 8400accession
Map Positions
#Map NameLinkage GroupBinPositionLocusMapViewer
17235 x TM-1, RIL (2007)AD_ch03_At.03N/A35.1NAU1071View
2AD-genome wide Reference Map (2009)AD_ch03_At.03N/A161NAU1071View
37235 x TM-1, F2:3 (2005)AD_ch03_At.03N/A66.5NAU1071View
4HS427-10 x TM-1, F2:3 (2005)AD_ch03_At.03N/A40.2NAU1071View
5PD6992 x SM3, F2:3 (2005)AD_ch03_At.03N/A21.4NAU1071View
60-153 x sGK9708, RIL (2016)AD_ch03_At.03N/A64.5NAU1071View
7CCRI 12-4 x (AD)5-7, F2 (2015)AD_ch03_At.03N/A74.1NAU1071View
80-153 x sGK9708, RIL (2017)AD_ch03_At.03N/A1.95NAU1071View
9TM-1 x (TX-0256 + TX-1046), CSIL (2016)AD_ch03_At.03N/A101.6NAU1071aView
10TM-1 x (TX-0256 + TX-1046), CSIL (2016)AD_ch14_Dt.02N/A17.8NAU1071bView