BNL1061, BNL1061 (genetic_marker) Gossypium hirsutum

Marker Overview
NameBNL1061
Genbank IDN/A
TypeSSR
SpeciesGossypium hirsutum
GermplasmDeltapine 90
Source Typegenomic
Repeat Motif(CA)12, (GT)11
PCR ConditionAnnealing temperature: 55
Primer 1BNL1061_F: GCTTGTCATCTCCATTGCTG
Primer 2BNL1061_R: TAGCCCGGTTCATGTTCTTC
PolymorphismP_ BNL1061
CommentPrimer data obtained in 2000
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Chr10chromosomeBNL1061:1..228 .
Chr10:3104164..3104390 +
scaffold131supercontigBNL1061:1..228 .
scaffold131:919634..919860 -
Germplasm
Stock NameType
Deltapine 90accession
Map Positions
#Map NameLinkage GroupBinPositionLocusMapViewer
1CCRI-36 x Hai-7124, F2 (2007)AD_ch25_Dt.06N/A39.3BNL1061View
2Guazuncho-2 x VH8-4602, consensus (2009)AD_ch22_Dt.04N/A39.98BNL1061View
3Guazuncho-2 x VH8-4602, consensus (2009)AD_ch25_Dt.06N/A33.2BNL1061View
4Guazuncho-2 x VH8-4602, RIL (2009)AD_ch22_Dt.04N/A38.36BNL1061View
5Guazuncho-2 x VH8-4602, RIL (2009)AD_ch25_Dt.06N/A11.64BNL1061View
6Handan-208 x Pima-90, F2:3 (2007)AD_ch22_Dt.04N/A186.5BNL1061View
7AD-genome wide Reference Map (2009)AD_ch25_Dt.06N/A36BNL1061View
8TM-1 x 3-79, RIL (2012)AD_ch25_Dt.06N/A104.28BNL1061View
9Emian-22 x 3-79, BC1 (2011)AD_ch25_Dt.06N/A108.13BNL1061View
10AD-genome wide Reference Map (2009)AD_ch22_Dt.04N/A83BNL1061View
11TM-1 x 3-79, RIL (2014)AD_ch25_Dt.06N/A100.8BNL1061View
12PD 94042 x (AD)4-08, F2 (2016)AD_ch06_At.06N/A0BNL1061View
13Monsanto SSR Bin Map, (2009)AD_ch25_Dt.06N/A101BNL1061View
14Guazuncho-2 x VH8-4602, BC1 (2005)AD_ch22_Dt.04N/A47.5BNL1061aView
15Guazuncho-2 x VH8-4602, BC2 (2005)AD_ch22_Dt.04N/A33.8BNL1061aView
16Palmeri x K-101, F2 (2007)AD_ch22_Dt.04N/A33.2BNL1061aView
170-153 x sGK9708, RIL (2015)AD_ch25_Dt.06N/A96.88BNL1061aView
180-153 x sGK9708, RIL (2016)AD_ch25_Dt.06N/A72.6BNL1061aView
19Guazuncho-2 x VH8-4602, BC2 (2005)AD_ch25_Dt.06N/A25.7BNL1061bView
20Guazuncho-2 x VH8-4602, BC1 (2005)AD_ch25_Dt.06N/A39BNL1061bView
21Palmeri x K-101, F2 (2007)AD_ch25_Dt.06N/A55.3BNL1061bView
220-153 x sGK9708, RIL (2015)AD_ch25_Dt.06N/A93.6BNL1061bView
230-153 x sGK9708, RIL (2016)AD_ch25_Dt.06N/A79.3BNL1061bView
24TM-1 x Hai-7124, BC1 (2007)AD_ch25_Dt.06N/A50.7BNL1061-165View
25TM-1 x Hai-7124, BC1 (2008)AD_ch25_Dt.06N/A87.71BNL1061-165View
26Vsg x (TM-1 x Hai-7124), DH (2005)AD_ch25_Dt.06N/A34.4BNL1061-165View
27TM-1 x Hai-7124, BC1 (2012)AD_ch25_Dt.06N/A97.4BNL1061-165View
28TM-1 x 3-79, RIL (2012.v3)AD_ch25_Dt.06N/A100.82BNL1061View