HAU3071, HAU3071 (genetic_marker) gossypium spp

Marker Overview
NameHAU3071
Genbank IDES806641
TypeSSR
SpeciesGossypium spp.
Source SequenceES806641.1
Source TypeEST
Repeat Motif(GTAT)5
PCR ConditionAnnealing temperature: 56.0
Primer 1HAU3071_F: TCCTCGGAATCTTCGAGTAGCGA
Primer 2HAU3071_R: ACGACAAACGTCAACCATAAGACA
Product Length339
Publication[view all]
CommentPrimer data obtained in 2012
Cross References
External references for this genetic_marker
DatabaseAccession
DB:genbankES806641
Relationships

The following sequence_feature feature(s) derives from this genetic_marker:

Feature NameUnique NameSpeciesType
ES806641.1ES806641.1Gossypium spp.sequence_feature


Map Positions
#Map NameLinkage GroupBinPositionLocusMapViewer
1(YM1 x CCRI35) x (YM1 x 7235), 4WC (2012)AD_ch14_Dt.02N/A102.2HAU3071View
2Yumian-1 x T586, RIL (2015)AD_ch14_Dt.02N/A4.9HAU3071View
3DH962 X Ji Mian 5, F2 (2015)AD_ch02_At.02N/A11.12HAU3071View
4GX1135 x GX100-2, RIL (2015)AD_ch02_At.02N/A2.5HAU3071View
5GX1135 x GX100-2, RIL (2016)AD_ch02_At.02N/A2.5HAU3071View
6GX1135 x VGX100-2, RIL (2016)AD_ch02_At.02N/A2.7HAU3071View
7DH962 x Ji Mian 5, RIL (2015)AD_ch02_At.02N/A5.7HAU3071View
8CCRI 12-4 x (AD)5-7, F2 (2015)AD_ch14_Dt.02N/A11.7HAU3071View
9CCRI-35 x Yumian-1, RIL (2015)AD_ch14_Dt.02N/A75.1HAU3071View
10CCRI-35 x Yumian-1, RIL (2017)AD_ch14_Dt.02N/A3.2HAU3071View
Sequence
>HAU3071 ID=HAU3071; Name=HAU3071; organism=Gossypium spp.; type=genetic_marker; length=339bp
TCCTCGGAATCTTCGAGTAGCGATGATGAAGAGAAAGGATCAAGAATATT
GAAGTCAAAATCTAGAAGAAAGAAGAAAAAGAAGAGCAAATCAACAAAAA
ATAAGAGCTCAACAAGCTGATGAGGTCTTGGCTGAAGACTTAATGGTATG
TATGTATGTATGTATGTGTATTGAGTGGTCGTAAGTCTGAGTTTATATTG
GCTTATGCTAAGAAAAAGAAGAGCTCAACAAGCTGATGAGGTCCTGTCTG
AAGACTTAAATGGTATGCATGTATGTGTGTATGTGTATTGAGTGTTCGTA
AGTCCGAGTTTATATTGTCTTATGGTTGACGTTTGTCGT