g.arboreum_cottongen_reftransV1_0009519, g.arboreum_cottongen_reftransV1_0009519 (contig) Gossypium arboreum
Overview
Alignments
The following features are aligned
Analyses
This contig is derived from or has results from the following analyses
Homology
BLAST of g.arboreum_cottongen_reftransV1_0009519 vs. ExPASy TrEMBL
Match: A0A0D2S2C1_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_012G130800 PE=4 SV=1) HSP 1 Score: 201.06 bits (510), Expect = 3.453e-59 Identity = 108/110 (98.18%), Postives = 109/110 (99.09%), Query Frame = -2 Query: 3 MGGCIXXXXXXXXXXXXXREEVSPTCCDIGFCGQKRTKRTFSDHVIALHHLPSVPNRVFTNGKSRSSCIFTQQGRKGINQDAMIVWEDFMPEDVTFCGVFDGHGPHGHLV 332 MGGC+STSSR TSGSMGRREEVSPTCCDIGFCGQKRTKRTFSDHVIALHHLPSVPNRVFTNGKSRSSCIFTQQGRKGINQDAMIVWEDFMPEDVTFCGVFDGHGPHGHLV Sbjct: 1 MGGCVSTSSRSTSGSMGRREEVSPTCCDIGFCGQKRTKRTFSDHVIALHHLPSVPNRVFTNGKSRSSCIFTQQGRKGINQDAMIVWEDFMPEDVTFCGVFDGHGPHGHLV 110
BLAST of g.arboreum_cottongen_reftransV1_0009519 vs. ExPASy TrEMBL
Match: A0A0B0NCI5_GOSAR (Uncharacterized protein OS=Gossypium arboreum GN=F383_11203 PE=4 SV=1) HSP 1 Score: 202.986 bits (515), Expect = 1.339e-58 Identity = 110/110 (100.00%), Postives = 110/110 (100.00%), Query Frame = -2 Query: 3 MGGCIXXXXXXXXXXXXXREEVSPTCCDIGFCGQKRTKRTFSDHVIALHHLPSVPNRVFTNGKSRSSCIFTQQGRKGINQDAMIVWEDFMPEDVTFCGVFDGHGPHGHLV 332 MGGCISTSSRRTSGSMGRREEVSPTCCDIGFCGQKRTKRTFSDHVIALHHLPSVPNRVFTNGKSRSSCIFTQQGRKGINQDAMIVWEDFMPEDVTFCGVFDGHGPHGHLV Sbjct: 1 MGGCISTSSRRTSGSMGRREEVSPTCCDIGFCGQKRTKRTFSDHVIALHHLPSVPNRVFTNGKSRSSCIFTQQGRKGINQDAMIVWEDFMPEDVTFCGVFDGHGPHGHLV 110
BLAST of g.arboreum_cottongen_reftransV1_0009519 vs. ExPASy TrEMBL
Match: A0A0D2VYW5_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_012G130800 PE=4 SV=1) HSP 1 Score: 202.216 bits (513), Expect = 2.520e-58 Identity = 108/110 (98.18%), Postives = 109/110 (99.09%), Query Frame = -2 Query: 3 MGGCIXXXXXXXXXXXXXREEVSPTCCDIGFCGQKRTKRTFSDHVIALHHLPSVPNRVFTNGKSRSSCIFTQQGRKGINQDAMIVWEDFMPEDVTFCGVFDGHGPHGHLV 332 MGGC+STSSR TSGSMGRREEVSPTCCDIGFCGQKRTKRTFSDHVIALHHLPSVPNRVFTNGKSRSSCIFTQQGRKGINQDAMIVWEDFMPEDVTFCGVFDGHGPHGHLV Sbjct: 1 MGGCVSTSSRSTSGSMGRREEVSPTCCDIGFCGQKRTKRTFSDHVIALHHLPSVPNRVFTNGKSRSSCIFTQQGRKGINQDAMIVWEDFMPEDVTFCGVFDGHGPHGHLV 110
BLAST of g.arboreum_cottongen_reftransV1_0009519 vs. ExPASy TrEMBL
Match: A0A0D2V5Y4_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_012G130800 PE=4 SV=1) HSP 1 Score: 201.83 bits (512), Expect = 2.775e-58 Identity = 108/110 (98.18%), Postives = 109/110 (99.09%), Query Frame = -2 Query: 3 MGGCIXXXXXXXXXXXXXREEVSPTCCDIGFCGQKRTKRTFSDHVIALHHLPSVPNRVFTNGKSRSSCIFTQQGRKGINQDAMIVWEDFMPEDVTFCGVFDGHGPHGHLV 332 MGGC+STSSR TSGSMGRREEVSPTCCDIGFCGQKRTKRTFSDHVIALHHLPSVPNRVFTNGKSRSSCIFTQQGRKGINQDAMIVWEDFMPEDVTFCGVFDGHGPHGHLV Sbjct: 1 MGGCVSTSSRSTSGSMGRREEVSPTCCDIGFCGQKRTKRTFSDHVIALHHLPSVPNRVFTNGKSRSSCIFTQQGRKGINQDAMIVWEDFMPEDVTFCGVFDGHGPHGHLV 110
BLAST of g.arboreum_cottongen_reftransV1_0009519 vs. ExPASy TrEMBL
Match: A0A0D2TNT9_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_012G130800 PE=4 SV=1) HSP 1 Score: 201.83 bits (512), Expect = 4.497e-58 Identity = 108/110 (98.18%), Postives = 109/110 (99.09%), Query Frame = -2 Query: 3 MGGCIXXXXXXXXXXXXXREEVSPTCCDIGFCGQKRTKRTFSDHVIALHHLPSVPNRVFTNGKSRSSCIFTQQGRKGINQDAMIVWEDFMPEDVTFCGVFDGHGPHGHLV 332 MGGC+STSSR TSGSMGRREEVSPTCCDIGFCGQKRTKRTFSDHVIALHHLPSVPNRVFTNGKSRSSCIFTQQGRKGINQDAMIVWEDFMPEDVTFCGVFDGHGPHGHLV Sbjct: 1 MGGCVSTSSRSTSGSMGRREEVSPTCCDIGFCGQKRTKRTFSDHVIALHHLPSVPNRVFTNGKSRSSCIFTQQGRKGINQDAMIVWEDFMPEDVTFCGVFDGHGPHGHLV 110
BLAST of g.arboreum_cottongen_reftransV1_0009519 vs. ExPASy TrEMBL
Match: A0A061E4T8_THECC (Phosphatase 2C 52 isoform 1 OS=Theobroma cacao GN=TCM_008018 PE=4 SV=1) HSP 1 Score: 180.644 bits (457), Expect = 3.389e-50 Identity = 81/89 (91.01%), Postives = 86/89 (96.63%), Query Frame = -2 Query: 3 VSPTCCDIGFCGQKRTKRTFSDHVIALHHLPSVPNRVFTNGKSRSSCIFTQQGRKGINQDAMIVWEDFMPEDVTFCGVFDGHGPHGHLV 269 VSP+C ++GFCGQKRTKRTFSDHVIAL HLPSVPNR+FTNGKSR+SCIFTQQGRKGINQDAMIVWEDFM EDVTFCGVFDGHGPHGHLV Sbjct: 22 VSPSCFEVGFCGQKRTKRTFSDHVIALQHLPSVPNRIFTNGKSRTSCIFTQQGRKGINQDAMIVWEDFMSEDVTFCGVFDGHGPHGHLV 110
BLAST of g.arboreum_cottongen_reftransV1_0009519 vs. ExPASy TrEMBL
Match: W9RAI5_9ROSA (Uncharacterized protein OS=Morus notabilis GN=L484_022157 PE=4 SV=1) HSP 1 Score: 177.178 bits (448), Expect = 6.268e-49 Identity = 87/110 (79.09%), Postives = 94/110 (85.45%), Query Frame = -2 Query: 3 MGGCIXXXXXXXXXXXXXREEVSPTCCDIGFCGQKRTKRTFSDHVIALHHLPSVPNRVFTNGKSRSSCIFTQQGRKGINQDAMIVWEDFMPEDVTFCGVFDGHGPHGHLV 332 MGGC+STSS+ T S + SP+C DIGF GQKRTKRTFSDHVIAL HLPS+PNR+F NGKSR+SCIFTQQGRKGINQDAMIVWEDFM ED FCGVFDGHGPHGHLV Sbjct: 1 MGGCVSTSSKSTCSSKSNGDTFSPSCWDIGFLGQKRTKRTFSDHVIALQHLPSIPNRIFMNGKSRTSCIFTQQGRKGINQDAMIVWEDFMSEDAIFCGVFDGHGPHGHLV 110
BLAST of g.arboreum_cottongen_reftransV1_0009519 vs. ExPASy TrEMBL
Match: I1M3V2_SOYBN (Uncharacterized protein OS=Glycine max PE=4 SV=1) HSP 1 Score: 176.022 bits (445), Expect = 1.805e-48 Identity = 85/110 (77.27%), Postives = 96/110 (87.27%), Query Frame = -2 Query: 3 MGGCIXXXXXXXXXXXXXREEVSPTCCDIGFCGQKRTKRTFSDHVIALHHLPSVPNRVFTNGKSRSSCIFTQQGRKGINQDAMIVWEDFMPEDVTFCGVFDGHGPHGHLV 332 MG C+STSS+ T S + ++PTC +IGFCGQK +RTFSDHV++LH LPS+PNR+FTNGKSRSSCIFTQQGRKGINQDAMIVWEDFM EDVTFCGVFDGHGPHGHLV Sbjct: 1 MGCCVSTSSQSTCSSGSNGDTIAPTCLEIGFCGQKSARRTFSDHVVSLHQLPSLPNRIFTNGKSRSSCIFTQQGRKGINQDAMIVWEDFMSEDVTFCGVFDGHGPHGHLV 110
BLAST of g.arboreum_cottongen_reftransV1_0009519 vs. ExPASy TrEMBL
Match: K7LW17_SOYBN (Uncharacterized protein OS=Glycine max PE=4 SV=1) HSP 1 Score: 175.637 bits (444), Expect = 2.802e-48 Identity = 85/110 (77.27%), Postives = 96/110 (87.27%), Query Frame = -2 Query: 3 MGGCIXXXXXXXXXXXXXREEVSPTCCDIGFCGQKRTKRTFSDHVIALHHLPSVPNRVFTNGKSRSSCIFTQQGRKGINQDAMIVWEDFMPEDVTFCGVFDGHGPHGHLV 332 MG C+STSS+ T S + ++PTC +IGFCGQK +RT SDHV++LH LPS+PNR+FTNGKSRSSCIFTQQGRKGINQDAMIVWEDFMPEDVTFCGVFDGHGPHGHLV Sbjct: 1 MGCCVSTSSQSTCSSRSNGDTIAPTCLEIGFCGQKSARRTSSDHVVSLHQLPSLPNRIFTNGKSRSSCIFTQQGRKGINQDAMIVWEDFMPEDVTFCGVFDGHGPHGHLV 110
BLAST of g.arboreum_cottongen_reftransV1_0009519 vs. ExPASy TrEMBL
Match: B9RW41_RICCO (Protein phosphatase-2c, putative OS=Ricinus communis GN=RCOM_1175970 PE=4 SV=1) HSP 1 Score: 175.252 bits (443), Expect = 3.155e-48 Identity = 85/110 (77.27%), Postives = 94/110 (85.45%), Query Frame = -2 Query: 3 MGGCIXXXXXXXXXXXXXREEVSPTCCDIGFCGQKRTKRTFSDHVIALHHLPSVPNRVFTNGKSRSSCIFTQQGRKGINQDAMIVWEDFMPEDVTFCGVFDGHGPHGHLV 332 MG C+STSSR T S E V P C IGFCGQK+TKRTFSDHV+ L HLPS+PNR+FTNGKSR+SCIFTQQGRKGINQDAMI+WEDF+ ED+TFCGVFDGHGPHGHLV Sbjct: 1 MGACVSTSSRSTCSSRSNGERVPPPCLGIGFCGQKKTKRTFSDHVVTLQHLPSIPNRIFTNGKSRTSCIFTQQGRKGINQDAMIIWEDFLSEDMTFCGVFDGHGPHGHLV 110
BLAST of g.arboreum_cottongen_reftransV1_0009519 vs. ExPASy Swiss-Prot
Match: P2C01_ARATH (Probable protein phosphatase 2C 1 OS=Arabidopsis thaliana GN=PPC6-6 PE=1 SV=1) HSP 1 Score: 146.362 bits (368), Expect = 1.801e-39 Identity = 73/110 (66.36%), Postives = 83/110 (75.45%), Query Frame = -2 Query: 3 MGGCIXXXXXXXXXXXXXREEVSPTCCDIGFCGQKRTKRTFSDHVIALHHLPSVPNRVFTNGKSRSSCIFTQQGRKGINQDAMIVWEDFMPEDVTFCGVFDGHGPHGHLV 332 MGGCIS +S E + C +G CG K KR FSD +++LH+L S+PNR+ NGKSRSSCIFTQQGRKGINQDAMIVWEDFM +DVTFCGVFDGHGPHGHLV Sbjct: 1 MGGCISKTSWSNE------EPMHRPCLGMGCCGSKMGKRGFSDRMVSLHNLVSIPNRIIGNGKSRSSCIFTQQGRKGINQDAMIVWEDFMSKDVTFCGVFDGHGPHGHLV 104
BLAST of g.arboreum_cottongen_reftransV1_0009519 vs. ExPASy Swiss-Prot
Match: P2C52_ARATH (Probable protein phosphatase 2C 52 OS=Arabidopsis thaliana GN=At4g03415 PE=2 SV=1) HSP 1 Score: 133.65 bits (335), Expect = 6.675e-35 Identity = 76/111 (68.47%), Postives = 88/111 (79.28%), Query Frame = -2 Query: 3 MGGCIXXXXXXXXXXXXXREE-VSPTCCDIGFCGQKRTKRTFSDHVIALHHLPSVPNRVFTNGKSRSSCIFTQQGRKGINQDAMIVWEDFMPEDVTFCGVFDGHGPHGHLV 332 MGGC+STSS+ T S E+ V IG C KR KRTFSDH+++L +L S+PNR+ ++ KSRSSCIFTQQGRKGINQDAMIVWEDFM EDVTFCGVFDGHGP+GHLV Sbjct: 1 MGGCVSTSSKSTCSSWSNGEKPVRRPYLGIGCCVSKRAKRTFSDHIVSLQNLTSIPNRITSSSKSRSSCIFTQQGRKGINQDAMIVWEDFMSEDVTFCGVFDGHGPYGHLV 111
BLAST of g.arboreum_cottongen_reftransV1_0009519 vs. ExPASy Swiss-Prot
Match: P2C64_ORYSJ (Probable protein phosphatase 2C 64 OS=Oryza sativa subsp. japonica GN=Os07g0566200 PE=2 SV=2) HSP 1 Score: 86.6557 bits (213), Expect = 1.921e-18 Identity = 40/63 (63.49%), Postives = 50/63 (79.37%), Query Frame = -2 Query: 3 HLPSVPNRVFTN-GKSRSSCIFTQQGRKGINQDAMIVWEDFMPEDV-TFCGVFDGHGPHGHLV 185 L VP R+F+N G+SR++ ++TQQGRKGINQDAM+VW+ F ED CGVFDGHGPHGH+V Sbjct: 36 QLGMVPGRIFSNDGRSRTATVYTQQGRKGINQDAMLVWDGFGGEDDGVLCGVFDGHGPHGHVV 98
BLAST of g.arboreum_cottongen_reftransV1_0009519 vs. ExPASy Swiss-Prot
Match: P2C33_ARATH (Probable protein phosphatase 2C 33 OS=Arabidopsis thaliana GN=PPC6-1 PE=1 SV=1) HSP 1 Score: 87.0409 bits (214), Expect = 2.025e-18 Identity = 38/61 (62.30%), Postives = 47/61 (77.05%), Query Frame = -2 Query: 3 LPSVPNRVFTNGKSRSSCIFTQQGRKGINQDAMIVWEDFMPE-DVTFCGVFDGHGPHGHLV 182 L VP R+F NG + +CI+TQQG+KG NQDAM+VWE+F D FCGVFDGHGP+GH+V Sbjct: 49 LNQVPGRMFLNGSTEVACIYTQQGKKGPNQDAMVVWENFGSRTDTIFCGVFDGHGPYGHMV 109
BLAST of g.arboreum_cottongen_reftransV1_0009519 vs. ExPASy Swiss-Prot
Match: P2C66_ORYSJ (Probable protein phosphatase 2C 66 OS=Oryza sativa subsp. japonica GN=Os08g0500300 PE=2 SV=1) HSP 1 Score: 87.0409 bits (214), Expect = 2.350e-18 Identity = 38/62 (61.29%), Postives = 44/62 (70.97%), Query Frame = -2 Query: 3 HHLPSVPNRVFTNGKSRSSCIFTQQGRKGINQDAMIVWEDFMPEDVTFCGVFDGHGPHGHLV 188 L V RV NG S ++C+ TQQGRKG NQDAM+VWE+F D FCGVFDGHGP+GH V Sbjct: 71 EELAKVEGRVCVNGASAAACLHTQQGRKGTNQDAMVVWENFNTSDSVFCGVFDGHGPYGHFV 132
BLAST of g.arboreum_cottongen_reftransV1_0009519 vs. ExPASy Swiss-Prot
Match: P2C74_ARATH (Probable protein phosphatase 2C 74 OS=Arabidopsis thaliana GN=At5g36250 PE=1 SV=1) HSP 1 Score: 83.1889 bits (204), Expect = 3.980e-17 Identity = 37/61 (60.66%), Postives = 47/61 (77.05%), Query Frame = -2 Query: 3 LPSVPNRVFTNGKSRSSCIFTQQGRKGINQDAMIVWEDF-MPEDVTFCGVFDGHGPHGHLV 182 L +P R+F NG + + +F+QQG+KG NQDAMIVWE+F ED FCGVFDGHGP+GH+V Sbjct: 52 LHRIPGRMFLNGSTDTVSLFSQQGKKGPNQDAMIVWENFGSMEDTVFCGVFDGHGPYGHIV 112
BLAST of g.arboreum_cottongen_reftransV1_0009519 vs. ExPASy Swiss-Prot
Match: P2C14_ORYSJ (Probable protein phosphatase 2C 14 OS=Oryza sativa subsp. japonica GN=Os02g0471500 PE=2 SV=1) HSP 1 Score: 82.4185 bits (202), Expect = 9.587e-17 Identity = 38/70 (54.29%), Postives = 48/70 (68.57%), Query Frame = -2 Query: 3 SDHVIALHHLPSVPNRVFTNGKSRSSCIFTQQGRKGINQDAMIVWEDF-MPEDVTFCGVFDGHGPHGHLV 209 +D A L +P R+ NG + ++T QG+KG+NQDAMIVWE+F ED FCGVFDGHGP+GHLV Sbjct: 105 ADGRRAAAELRGIPGRIAGNGACAVASLYTLQGKKGVNQDAMIVWENFCSREDTIFCGVFDGHGPNGHLV 174
BLAST of g.arboreum_cottongen_reftransV1_0009519 vs. ExPASy Swiss-Prot
Match: P2C18_ARATH (Probable protein phosphatase 2C 18 OS=Arabidopsis thaliana GN=At1g79630 PE=2 SV=1) HSP 1 Score: 81.6481 bits (200), Expect = 1.489e-16 Identity = 35/64 (54.69%), Postives = 49/64 (76.56%), Query Frame = -2 Query: 3 LHHLPSVPNRVFTNGKSRSSCIFTQQGRKGINQDAMIVWEDF-MPEDVTFCGVFDGHGPHGHLV 191 + +P V R+ +NG S+ +C++TQQG+KG NQDAM+V+E+F +D FCGVFDGHGP GH+V Sbjct: 49 IEGIPQVLGRLVSNGSSKIACLYTQQGKKGTNQDAMLVFENFCSRDDTVFCGVFDGHGPFGHMV 112
BLAST of g.arboreum_cottongen_reftransV1_0009519 vs. ExPASy Swiss-Prot
Match: P2C75_ORYSJ (Probable protein phosphatase 2C 75 OS=Oryza sativa subsp. japonica GN=Os11g0417400 PE=2 SV=1) HSP 1 Score: 79.7221 bits (195), Expect = 4.842e-16 Identity = 33/58 (56.90%), Postives = 42/58 (72.41%), Query Frame = -2 Query: 3 VPNRVFTNGKSRSSCIFTQQGRKGINQDAMIVWEDFM-PEDVTFCGVFDGHGPHGHLV 173 P R+ NG +C+FT+QG+KG NQDAM+ WE++ D FCGVFDGHGPHGHL+ Sbjct: 32 APGRIAGNGAGNVACLFTRQGKKGTNQDAMVAWENYNGRSDTVFCGVFDGHGPHGHLI 89
BLAST of g.arboreum_cottongen_reftransV1_0009519 vs. ExPASy Swiss-Prot
Match: P2C06_ARATH (Probable protein phosphatase 2C 6 OS=Arabidopsis thaliana GN=At1g16220 PE=2 SV=1) HSP 1 Score: 78.5666 bits (192), Expect = 1.492e-15 Identity = 34/64 (53.12%), Postives = 44/64 (68.75%), Query Frame = -2 Query: 3 LHHLPSVPNRVFTNGKSRSSCIFTQQGRKGINQDAMIVWEDFMPE-DVTFCGVFDGHGPHGHLV 191 + + V R+ NG S +C++TQQG+KG NQDAM+VWE+F D CGVFDGHGP GH+V Sbjct: 46 ISEIQQVVGRLVGNGSSEIACLYTQQGKKGTNQDAMLVWENFCSRSDTVLCGVFDGHGPFGHMV 109 The following BLAST results are available for this feature:
BLAST of g.arboreum_cottongen_reftransV1_0009519 vs. ExPASy TrEMBL
Analysis Date: 2016-11-15 (Homology Analysis for Gossypium arboreum CottonGen RefTrans V1 vs TrEMBL) Total hits: 25
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BLAST of g.arboreum_cottongen_reftransV1_0009519 vs. ExPASy Swiss-Prot
Analysis Date: 2016-11-15 (Homology Analysis for Gossypium arboreum CottonGen RefTrans V1 vs SwissProt) Total hits: 16
Pagesback to topSequences
The
following sequences are available for this feature:
contig sequence >g.arboreum_cottongen_reftransV1_0009519 ID=g.arboreum_cottongen_reftransV1_0009519; Name=g.arboreum_cottongen_reftransV1_0009519; organism=Gossypium arboreum; type=contig; length=648bpback to top |