g.arboreum_cottongen_reftransV1_0019448, g.arboreum_cottongen_reftransV1_0019448 (contig) Gossypium arboreum

Overview
Nameg.arboreum_cottongen_reftransV1_0019448
Unique Nameg.arboreum_cottongen_reftransV1_0019448
Typecontig
OrganismGossypium arboreum (Tree cotton)
Sequence length1043
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Chr12chromosomeg.arboreum_cottongen_reftransV1_0019448:1..1043 .
Chr12:138718000..138721119 -
Homology
BLAST of g.arboreum_cottongen_reftransV1_0019448 vs. ExPASy TrEMBL
Match: A0A0D2VUK3_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_012G023700 PE=4 SV=1)

HSP 1 Score: 285.804 bits (730), Expect = 2.499e-84
Identity = 131/135 (97.04%), Postives = 135/135 (100.00%), Query Frame = -2
Query:  638 RKLNLNQSARRRYKEQGNAGSLFCIVCGRSYSKEFMDTQRLVTHAFMSHRVGLRAEHLGLHKAICVLLGWDSIAPPDTITWVPQVLPEAEALAQKEDLVLWPPIVVIHNISMANNNPQEQKVVPIEGVQAFLRGE 1042
            RKLNLNQSARRRYKEQGNAGSLFCIVCG+SYSKEFMDTQRLVTHAFMSH+VGLRAEHLGLHKA+CVLLGWDSIAPPDTITWVPQVLPEAEALAQKEDLVLWPPIVVIHNISMANNNPQEQKVVPIEGVQAFLRG+
Sbjct:  723 RKLNLNQSARRRYKEQGNAGSLFCIVCGKSYSKEFMDTQRLVTHAFMSHKVGLRAEHLGLHKAVCVLLGWDSIAPPDTITWVPQVLPEAEALAQKEDLVLWPPIVVIHNISMANNNPQEQKVVPIEGVQAFLRGK 857          

HSP 2 Score: 237.654 bits (605), Expect = 4.785e-67
Identity = 114/115 (99.13%), Postives = 114/115 (99.13%), Query Frame = -3
Query:  118 KGFVGGKITVCLGRPADQSVMVVKFLGTFTGLAMAERLHKYFVENKRGRKEFTSKNKGDEEMGKPGEGEEQLLYGYMGVSEDLDKLDFHNRKWSVVKSKKEILDLANDPVKTDER 462
            KGFVGGKITVCLGRPADQSVMVVKFLGTFTGLAMAERLHKYFVENKRGRKEFTSKNKGDEEMGKP EGEEQLLYGYMGVSEDLDKLDFHNRKWSVVKSKKEILDLANDPVKTDER
Sbjct:  857 KGFVGGKITVCLGRPADQSVMVVKFLGTFTGLAMAERLHKYFVENKRGRKEFTSKNKGDEEMGKPDEGEEQLLYGYMGVSEDLDKLDFHNRKWSVVKSKKEILDLANDPVKTDER 971          
BLAST of g.arboreum_cottongen_reftransV1_0019448 vs. ExPASy TrEMBL
Match: A0A061FQZ7_THECC (Suppressor of gene silencing 3, putative OS=Theobroma cacao GN=TCM_043762 PE=4 SV=1)

HSP 1 Score: 273.478 bits (698), Expect = 1.056e-79
Identity = 124/133 (93.23%), Postives = 131/133 (98.50%), Query Frame = -2
Query:  644 RKLNLNQSARRRYKEQGNAGSLFCIVCGRSYSKEFMDTQRLVTHAFMSHRVGLRAEHLGLHKAICVLLGWDSIAPPDTITWVPQVLPEAEALAQKEDLVLWPPIVVIHNISMANNNPQEQKVVPIEGVQAFLR 1042
            +KLNLNQS RRRYKEQG+AGSLFCIVCGRSYSKEFMDTQRLVTHAFMSH+VGLRA+HLGLHKAICVLLGWDSIAPPDT+TWVP +LPEAEALAQKEDLVLWPPIVVIHNISMANN+PQEQKVVPIEGVQAFLR
Sbjct:  724 KKLNLNQSVRRRYKEQGHAGSLFCIVCGRSYSKEFMDTQRLVTHAFMSHKVGLRAQHLGLHKAICVLLGWDSIAPPDTVTWVPHILPEAEALAQKEDLVLWPPIVVIHNISMANNDPQEQKVVPIEGVQAFLR 856          

HSP 2 Score: 182.185 bits (461), Expect = 2.564e-47
Identity = 89/124 (71.77%), Postives = 101/124 (81.45%), Query Frame = -3
Query:  118 MTDKGFVGGKITVCLGRPADQSVMVVKFLGTFTGLAMAERLHKYFVENKRGRKEF--TSKNKGDEEMG----KPGEGEEQLLYGYMGVSEDLDKLDFHNRKWSVVKSKKEILDLANDPVKTDER 471
            + DKGF+GGKITVCLGRPADQS+MVVKFLGTFTGLAMAERLHKYFV   RGR +F   + N G   +G    +  + EEQLLYGYM ++EDLDKLDFHNRKWS++KSKKEI DLANDPVK DER
Sbjct:  855 LRDKGFIGGKITVCLGRPADQSIMVVKFLGTFTGLAMAERLHKYFVGQDRGRVDFQQITSNNGKSSVGEMQIQVDKLEEQLLYGYMAIAEDLDKLDFHNRKWSLIKSKKEIQDLANDPVKIDER 978          
BLAST of g.arboreum_cottongen_reftransV1_0019448 vs. ExPASy TrEMBL
Match: D7UBX2_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_13s0074g00650 PE=4 SV=1)

HSP 1 Score: 224.172 bits (570), Expect = 2.441e-67
Identity = 102/133 (76.69%), Postives = 118/133 (88.72%), Query Frame = -2
Query:  644 RKLNLNQSARRRYKEQGNAGSLFCIVCGRSYSKEFMDTQRLVTHAFMSHRVGLRAEHLGLHKAICVLLGWDSIAPPDTITWVPQVLPEAEALAQKEDLVLWPPIVVIHNISMANNNPQEQKVVPIEGVQAFLR 1042
            +KLN + S RRRYKEQG AGSLFCIVCGRS SKEFMDTQRLVTHA+MSH+ GLRA+HLGLHKAICVLLGW+SI PPDTITWVP VLP  EAL QKEDL+LWPP+V+IHNIS++N++P+E K+V IE + AFLR
Sbjct:   11 KKLNEHPSVRRRYKEQGQAGSLFCIVCGRSNSKEFMDTQRLVTHAYMSHKFGLRADHLGLHKAICVLLGWNSIVPPDTITWVPHVLPGDEALTQKEDLILWPPLVIIHNISISNSDPEEWKLVTIEALGAFLR 143          

HSP 2 Score: 113.62 bits (283), Expect = 1.405e-25
Identity = 57/111 (51.35%), Postives = 78/111 (70.27%), Query Frame = -3
Query:  124 VCLGRPADQSVMVVKFLGTFTGLAMAERLHKYFVENKRGRKEF------TSKNKGDEEMG-KPGEGEEQLLYGYMGVSEDLDKLDFHNRKWSVVKSKKEILDLANDPVKTD 435
            +CLG+PAD SVMVVKFLGTF+GL  A +LHKY+  N  GR +         K+    E G +P + EE +LYGYMG++EDLDKLDF +++  +++SK+EI +LA+ PVK D
Sbjct:  154 MCLGKPADHSVMVVKFLGTFSGLEDAVKLHKYYAGNNHGRADLEKINYNNGKSSSSTEAGMQPDKPEEVVLYGYMGIAEDLDKLDFDSKRRCLIQSKQEIRELADAPVKPD 264          
BLAST of g.arboreum_cottongen_reftransV1_0019448 vs. ExPASy TrEMBL
Match: A0A067L967_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_01506 PE=4 SV=1)

HSP 1 Score: 235.728 bits (600), Expect = 2.566e-66
Identity = 100/135 (74.07%), Postives = 124/135 (91.85%), Query Frame = -2
Query:  638 RKLNLNQSARRRYKEQGNAGSLFCIVCGRSYSKEFMDTQRLVTHAFMSHRVGLRAEHLGLHKAICVLLGWDSIAPPDTITWVPQVLPEAEALAQKEDLVLWPPIVVIHNISMANNNPQEQKVVPIEGVQAFLRGE 1042
            +KLNLN + RRRYKEQG AGSLFCIVCGRS SK+F+DTQRLVTHAFMSH+VGLRA+HLGLHKAIC+L+GW++  P DT TW+P +LP+ EA AQKEDL+LWPP+V+IHNISM+N+NP++QKV+PIEGV+AF+RG+
Sbjct:  721 KKLNLNSAVRRRYKEQGKAGSLFCIVCGRSASKDFLDTQRLVTHAFMSHKVGLRAQHLGLHKAICILMGWNTYVPCDTQTWIPDILPDTEAWAQKEDLMLWPPLVIIHNISMSNDNPEQQKVIPIEGVEAFIRGK 855          

HSP 2 Score: 158.688 bits (400), Expect = 4.440e-39
Identity = 78/119 (65.55%), Postives = 93/119 (78.15%), Query Frame = -3
Query:  118 KGFVGGKITVCLGRPADQSVMVVKFLGTFTGLAMAERLHKYFVENKRGRKEFTSKNKGDEEMGKPG-EG---EEQLLYGYMGVSEDLDKLDFHNRKWSVVKSKKEILDLANDPVKTDER 462
            KGF GGKI VCLG+PADQSV++VKFLGTFTGL  AERLHKYF EN+ GR+EF  K      + + G EG   EEQLLYGYMG+++DLD+LDF+ +KW  VKSKK+I DL N PVKTD+R
Sbjct:  855 KGFAGGKIKVCLGKPADQSVILVKFLGTFTGLGNAERLHKYFAENEHGREEFERKTSNSSNVSEAGIEGDKLEEQLLYGYMGIADDLDRLDFNTKKWITVKSKKDIEDLENAPVKTDDR 973          
BLAST of g.arboreum_cottongen_reftransV1_0019448 vs. ExPASy TrEMBL
Match: V4SQ13_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10030758mg PE=4 SV=1)

HSP 1 Score: 232.646 bits (592), Expect = 7.912e-66
Identity = 104/135 (77.04%), Postives = 119/135 (88.15%), Query Frame = -2
Query:  638 RKLNLNQSARRRYKEQGNAGSLFCIVCGRSYSKEFMDTQRLVTHAFMSHRVGLRAEHLGLHKAICVLLGWDSIAPPDTITWVPQVLPEAEALAQKEDLVLWPPIVVIHNISMANNNPQEQKVVPIEGVQAFLRGE 1042
            +KLN+N S RRRYKEQG AGSLFCI CGRS SKEFM+TQ LV HAFMSH+VGLRA HLGL KAICVL+GW+S+ P D ITWVP VL + EA+AQKEDL+LWPP+V+I NISM+NNNP+EQKVVPIEGV+AFLRGE
Sbjct:  525 KKLNVNPSVRRRYKEQGKAGSLFCIACGRSMSKEFMNTQSLVRHAFMSHKVGLRAMHLGLQKAICVLMGWNSVVPHDMITWVPDVLHDEEAMAQKEDLILWPPVVIIRNISMSNNNPKEQKVVPIEGVEAFLRGE 659          

HSP 2 Score: 157.918 bits (398), Expect = 2.870e-39
Identity = 81/120 (67.50%), Postives = 94/120 (78.33%), Query Frame = -3
Query:  124 KGFVGGKITVCLGRPADQSVMVVKFLGTFTGLAMAERLHKYFVENKRGRKEF------TSKNKGDEEMGKPGEG-EEQLLYGYMGVSEDLDKLDFHNRKWSVVKSKKEILDLANDPVKTD 462
            +GF+GGKITVCLGRPADQSVMVVKFLGTFTGL  AE+LHKYFVE+K GR EF       S++  + E    G+  EEQLLYGYMGVSEDLD +DF+ +K+  +KSKKEILDLAN PVK D
Sbjct:  659 EGFIGGKITVCLGRPADQSVMVVKFLGTFTGLGNAEKLHKYFVEHKHGRAEFVQLTSSNSRSSINVEAQMHGDKLEEQLLYGYMGVSEDLDSVDFNTKKYCFIKSKKEILDLANAPVKPD 778          
BLAST of g.arboreum_cottongen_reftransV1_0019448 vs. ExPASy TrEMBL
Match: A0A067DV99_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g001084mg PE=4 SV=1)

HSP 1 Score: 234.958 bits (598), Expect = 1.318e-65
Identity = 104/135 (77.04%), Postives = 119/135 (88.15%), Query Frame = -2
Query:  638 RKLNLNQSARRRYKEQGNAGSLFCIVCGRSYSKEFMDTQRLVTHAFMSHRVGLRAEHLGLHKAICVLLGWDSIAPPDTITWVPQVLPEAEALAQKEDLVLWPPIVVIHNISMANNNPQEQKVVPIEGVQAFLRGE 1042
            +KLN+N S RRRYKEQG AGSLFCI CGRS SKEFM+TQ LV HAFMSH+VGLRA HLGL KAICVL+GW+S+ P D ITWVP VL + EA+AQKEDL+LWPP+V+I NISM+NNNP+EQKVVPIEGV+AFLRGE
Sbjct:  907 KKLNVNPSVRRRYKEQGKAGSLFCIACGRSMSKEFMNTQSLVRHAFMSHKVGLRAMHLGLQKAICVLMGWNSVVPHDMITWVPDVLHDEEAMAQKEDLILWPPVVIIRNISMSNNNPKEQKVVPIEGVEAFLRGE 1041          

HSP 2 Score: 153.68 bits (387), Expect = 3.044e-37
Identity = 81/120 (67.50%), Postives = 94/120 (78.33%), Query Frame = -3
Query:  124 KGFVGGKITVCLGRPADQSVMVVKFLGTFTGLAMAERLHKYFVENKRGRKEF------TSKNKGDEEMGKPGEG-EEQLLYGYMGVSEDLDKLDFHNRKWSVVKSKKEILDLANDPVKTD 462
            +GF+GGKITVCLGRPADQSVMVVKFLGTFTGL  AE+LHKYFVE+K GR EF       S++  + E    G+  EEQLLYGYMGVSEDLD +DF+ +K+  +KSKKEILDLAN PVK D
Sbjct: 1041 EGFIGGKITVCLGRPADQSVMVVKFLGTFTGLGNAEKLHKYFVEHKHGRAEFVQLTSSNSRSSINVEAQMHGDKLEEQLLYGYMGVSEDLDSVDFNTKKYCFIKSKKEILDLANAPVKPD 1160          
BLAST of g.arboreum_cottongen_reftransV1_0019448 vs. ExPASy TrEMBL
Match: K7LKH7_SOYBN (Uncharacterized protein OS=Glycine max PE=4 SV=1)

HSP 1 Score: 231.491 bits (589), Expect = 6.583e-65
Identity = 102/135 (75.56%), Postives = 123/135 (91.11%), Query Frame = -2
Query:  638 RKLNLNQSARRRYKEQGNAGSLFCIVCGRSYSKEFMDTQRLVTHAFMSHRVGLRAEHLGLHKAICVLLGWDSIAPPDTITWVPQVLPEAEALAQKEDLVLWPPIVVIHNISMANNNPQEQKVVPIEGVQAFLRGE 1042
            +KLNLN   +RRY++QG AGSL+CIVCGRS SKEFMDTQRLVTHAFMSH+ GLRA+HLGLHKAICVL+GWD++ P DT+TWVPQVLP+AEALAQKEDL+LWPPIV+IHNISM+++NPQ  KVV +E ++AFLRG+
Sbjct:  724 KKLNLNLYVQRRYQDQGKAGSLYCIVCGRSSSKEFMDTQRLVTHAFMSHKTGLRAKHLGLHKAICVLMGWDTVVPQDTVTWVPQVLPQAEALAQKEDLILWPPIVIIHNISMSDDNPQNWKVVSMETIEAFLRGK 858          

HSP 2 Score: 132.88 bits (333), Expect = 2.548e-30
Identity = 69/120 (57.50%), Postives = 92/120 (76.67%), Query Frame = -3
Query:  118 KGFVGGKITVCLGRPADQSVMVVKFLGTFTGLAMAERLHKYFVENKRGRKEFTS-KNKGDEE--MGKPGEGE--EQLLYGYMGVSEDLDKLDFHNRKWSVVKSKKEILDLANDPVKTDER 462
            KGFV G+I +CLG+PADQS+++VKFLGTF GL  AERLHKY  +N   R E+   K++G +    G+  EG+  E +LYGY+G++EDLDKLDF+++KWS+VKS+KEI DL   PVKTDE+
Sbjct:  858 KGFVRGRIKLCLGKPADQSIVLVKFLGTFGGLGDAERLHKYLSDNNCSRAEYERVKSEGIKSCNTGETDEGDKVENILYGYVGIAEDLDKLDFNSKKWSMVKSRKEIDDLDKAPVKTDEK 977          
BLAST of g.arboreum_cottongen_reftransV1_0019448 vs. ExPASy TrEMBL
Match: A0A0B2RXW3_GLYSO (Protein SUPPRESSOR OF GENE SILENCING 3 OS=Glycine soja GN=glysoja_016964 PE=4 SV=1)

HSP 1 Score: 231.491 bits (589), Expect = 6.583e-65
Identity = 102/135 (75.56%), Postives = 123/135 (91.11%), Query Frame = -2
Query:  638 RKLNLNQSARRRYKEQGNAGSLFCIVCGRSYSKEFMDTQRLVTHAFMSHRVGLRAEHLGLHKAICVLLGWDSIAPPDTITWVPQVLPEAEALAQKEDLVLWPPIVVIHNISMANNNPQEQKVVPIEGVQAFLRGE 1042
            +KLNLN   +RRY++QG AGSL+CIVCGRS SKEFMDTQRLVTHAFMSH+ GLRA+HLGLHKAICVL+GWD++ P DT+TWVPQVLP+AEALAQKEDL+LWPPIV+IHNISM+++NPQ  KVV +E ++AFLRG+
Sbjct:  724 KKLNLNLYVQRRYQDQGKAGSLYCIVCGRSSSKEFMDTQRLVTHAFMSHKTGLRAKHLGLHKAICVLMGWDTVVPQDTVTWVPQVLPQAEALAQKEDLILWPPIVIIHNISMSDDNPQNWKVVSMETIEAFLRGK 858          

HSP 2 Score: 132.88 bits (333), Expect = 2.548e-30
Identity = 69/120 (57.50%), Postives = 92/120 (76.67%), Query Frame = -3
Query:  118 KGFVGGKITVCLGRPADQSVMVVKFLGTFTGLAMAERLHKYFVENKRGRKEFTS-KNKGDEE--MGKPGEGE--EQLLYGYMGVSEDLDKLDFHNRKWSVVKSKKEILDLANDPVKTDER 462
            KGFV G+I +CLG+PADQS+++VKFLGTF GL  AERLHKY  +N   R E+   K++G +    G+  EG+  E +LYGY+G++EDLDKLDF+++KWS+VKS+KEI DL   PVKTDE+
Sbjct:  858 KGFVRGRIKLCLGKPADQSIVLVKFLGTFGGLGDAERLHKYLSDNNCSRAEYERVKSEGIKSCNTGETDEGDKVENILYGYVGIAEDLDKLDFNSKKWSMVKSRKEIDDLDKAPVKTDEK 977          
BLAST of g.arboreum_cottongen_reftransV1_0019448 vs. ExPASy TrEMBL
Match: B9T197_RICCO (Putative uncharacterized protein OS=Ricinus communis GN=RCOM_0760530 PE=4 SV=1)

HSP 1 Score: 229.95 bits (585), Expect = 2.415e-64
Identity = 102/135 (75.56%), Postives = 119/135 (88.15%), Query Frame = -2
Query:  638 RKLNLNQSARRRYKEQGNAGSLFCIVCGRSYSKEFMDTQRLVTHAFMSHRVGLRAEHLGLHKAICVLLGWDSIAPPDTITWVPQVLPEAEALAQKEDLVLWPPIVVIHNISMANNNPQEQKVVPIEGVQAFLRGE 1042
            +KLNLN + RRRYKEQG AGSLFCIVC RS SK+F+DTQRLVTHAFMSH+VGLRA HLGLHKAICVL+GW++  P DT TWVP VL + EA AQKEDL+LWPP+V+IHNISM+NNNP++Q VVPIEGV+ FLRG+
Sbjct:  710 KKLNLNSAVRRRYKEQGKAGSLFCIVCRRSASKDFLDTQRLVTHAFMSHKVGLRARHLGLHKAICVLMGWNTYVPCDTTTWVPDVLSDEEAWAQKEDLMLWPPLVIIHNISMSNNNPEQQTVVPIEGVEGFLRGK 844          

HSP 2 Score: 154.451 bits (389), Expect = 1.298e-37
Identity = 76/119 (63.87%), Postives = 92/119 (77.31%), Query Frame = -3
Query:  118 KGFVGGKITVCLGRPADQSVMVVKFLGTFTGLAMAERLHKYFVENKRGRKEFTSKNKGDEEMGKPGEG----EEQLLYGYMGVSEDLDKLDFHNRKWSVVKSKKEILDLANDPVKTDER 462
            KGFVGGKI VCLG+PADQSVM+VKFLGTFTGL +AERL KYF EN+RGR+EF  K        + GE     EE+LL+GY+G++EDLDKLDF+ +KW  +KSKK+I DL N PVK D+R
Sbjct:  844 KGFVGGKIKVCLGKPADQSVMLVKFLGTFTGLGIAERLAKYFAENQRGREEFEQKTSNSSNSLEEGEHGGKLEERLLHGYIGIAEDLDKLDFNTKKWISLKSKKDIQDLENAPVKADDR 962          
BLAST of g.arboreum_cottongen_reftransV1_0019448 vs. ExPASy TrEMBL
Match: A0A0B2NZM0_GLYSO (Uncharacterized protein OS=Glycine soja GN=glysoja_000580 PE=4 SV=1)

HSP 1 Score: 229.565 bits (584), Expect = 3.166e-64
Identity = 100/135 (74.07%), Postives = 122/135 (90.37%), Query Frame = -2
Query:  638 RKLNLNQSARRRYKEQGNAGSLFCIVCGRSYSKEFMDTQRLVTHAFMSHRVGLRAEHLGLHKAICVLLGWDSIAPPDTITWVPQVLPEAEALAQKEDLVLWPPIVVIHNISMANNNPQEQKVVPIEGVQAFLRGE 1042
            +KLNLN   +RRY++QG AGSL+CIVCGRS SKEFMDTQRLVTHAFMSH+ GLRA+HLGLHKA+CVL+GWD++ P DT+TWVPQVLP+AEALAQKEDL+LWPPIV+IHNISM+++NPQ  KVV +E ++ FLRG+
Sbjct:  725 KKLNLNLYVQRRYEDQGKAGSLYCIVCGRSSSKEFMDTQRLVTHAFMSHKAGLRAKHLGLHKAVCVLMGWDTVVPQDTVTWVPQVLPQAEALAQKEDLILWPPIVIIHNISMSDDNPQNWKVVSMETIEGFLRGK 859          

HSP 2 Score: 135.191 bits (339), Expect = 4.501e-31
Identity = 70/120 (58.33%), Postives = 93/120 (77.50%), Query Frame = -3
Query:  118 KGFVGGKITVCLGRPADQSVMVVKFLGTFTGLAMAERLHKYFVENKRGRKEFTS-KNKGDEE--MGKPGEGE--EQLLYGYMGVSEDLDKLDFHNRKWSVVKSKKEILDLANDPVKTDER 462
            KGFV G+I +CLG+PADQSV++VKFLGTF GL  AERLHKY  +N  GR E+   K++G +   + +  EG+  E +LYGY+G++EDLDKLDF+++KWS+VKS+KEI DL   PVKTDE+
Sbjct:  859 KGFVRGRIKLCLGKPADQSVVLVKFLGTFGGLGDAERLHKYLSDNNHGRAEYERVKSEGIKSCNISETDEGDKVENILYGYVGIAEDLDKLDFNSKKWSMVKSRKEIDDLDKAPVKTDEK 978          
The following BLAST results are available for this feature:
BLAST of g.arboreum_cottongen_reftransV1_0019448 vs. ExPASy TrEMBL
Analysis Date: 2016-11-15 (Homology Analysis for Gossypium arboreum CottonGen RefTrans V1 vs TrEMBL)
Total hits: 25
Match NameE-valueIdentityDescription
A0A0D2VUK3_GOSRA2.499e-8497.04Uncharacterized protein OS=Gossypium raimondii GN=... [more]
A0A061FQZ7_THECC1.056e-7993.23Suppressor of gene silencing 3, putative OS=Theobr... [more]
D7UBX2_VITVI2.441e-6776.69Putative uncharacterized protein OS=Vitis vinifera... [more]
A0A067L967_JATCU2.566e-6674.07Uncharacterized protein OS=Jatropha curcas GN=JCGZ... [more]
V4SQ13_9ROSI7.912e-6677.04Uncharacterized protein OS=Citrus clementina GN=CI... [more]
A0A067DV99_CITSI1.318e-6577.04Uncharacterized protein OS=Citrus sinensis GN=CISI... [more]
K7LKH7_SOYBN6.583e-6575.56Uncharacterized protein OS=Glycine max PE=4 SV=1[more]
A0A0B2RXW3_GLYSO6.583e-6575.56Protein SUPPRESSOR OF GENE SILENCING 3 OS=Glycine ... [more]
B9T197_RICCO2.415e-6475.56Putative uncharacterized protein OS=Ricinus commun... [more]
A0A0B2NZM0_GLYSO3.166e-6474.07Uncharacterized protein OS=Glycine soja GN=glysoja... [more]

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BLAST of g.arboreum_cottongen_reftransV1_0019448 vs. ExPASy Swiss-Prot
Analysis Date: 2016-11-15 (Homology Analysis for Gossypium arboreum CottonGen RefTrans V1 vs SwissProt)
Total hits: 0
Match NameE-valueIdentityDescription
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InterPro
Analysis Name: InterProScan analysis for Gossypium arboreum CottonGen RefTrans V1
Date Performed: 2016-11-14
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR21596:SF14SUBFAMILY NOT NAMEDcoord: 1..130
NoneNo IPR availablePANTHERPTHR21596RIBONUCLEASE P SUBUNIT P38coord: 1..130

Sequences
The following sequences are available for this feature:

contig sequence

>g.arboreum_cottongen_reftransV1_0019448 ID=g.arboreum_cottongen_reftransV1_0019448; Name=g.arboreum_cottongen_reftransV1_0019448; organism=Gossypium arboreum; type=contig; length=1043bp
GGGATACAATACAAAACTAGCAGAAAATAAGGTTTAATGAAATGGCTTTG
TTTTAGAAGAGATATTAACTAAAATATTCCTTCAGAGAGATATATGTATG
TATATTATGAAAAGCTACCTTTCATCAGTTTTGACAGGATCATTAGCCAA
GTCCAGGATCTCCTTCTTGCTCTTTACCACACTCCATTTCCTGTTATGAA
AATCAAGTTTGTCCAAGTCCTCTGATACTCCCATATATCCATACAGCAGT
TGTTCCTCCCCCTCACCGGGTTTTCCCATTTCCTCATCCCCCTTATTTTT
TGATGTAAATTCCTTTCTCCCTCGCTTATTCTCCACGAAATACTTGTGAA
GTCTCTCTGCCATCGCCAGTCCAGTAAATGTGCCTAAGAATTTCACCACC
ATAACACTTTGGTCTGCAGGCCTCCCTAGGCACACCGTGATTTTCCCCCC
AACAAACCCTTTATCTGTCATCATTCAATAACCAACATGGGGAAGAACAA
GAAAAACAACAAAACCACAATCCATGAAAACAAATAAATACACATCAGTC
TTCATATTCACCAGTAAGTATAAAAGCTTACTAAATACATTAAGGCGTTT
ACTAAATAAATCATCATGCAAATTTATCAGTCAAGTGCTCACCTCTTAGG
AAAGCCTGCACCCCTTCAATTGGAACAACCTTCTGTTCTTGAGGGTTGTT
ATTTGCCATGGAAATGTTGTGGATGACCACAATTGGAGGCCAGAGAACCA
AATCCTCCTTCTGAGCCAAGGCTTCAGCTTCAGGCAAGACCTGGGGAACC
CATGTTATAGTGTCAGGAGGTGCTATGCTGTCCCACCCCAGCAACACACA
TATTGCTTTGTGAAGACCCAAGTGCTCTGCCCTCAACCCAACCCTGTGAG
ACATGAAAGCATGCGTCACCAGGCGTTGGGTGTCCATGAATTCCTTTGAG
TAGCTTCTTCCACATACAATGCAGAACAAACTACCAGCATTTCCTTGCTC
CTTGTATCTTCTACGAGCAGACTGGTTCAAATTTAACTTTCTA
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