g.arboreum_cottongen_reftransV1_0008254, g.arboreum_cottongen_reftransV1_0008254 (contig) Gossypium arboreum

Overview
Nameg.arboreum_cottongen_reftransV1_0008254
Unique Nameg.arboreum_cottongen_reftransV1_0008254
Typecontig
OrganismGossypium arboreum (Tree cotton)
Sequence length1379
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Chr13chromosomeg.arboreum_cottongen_reftransV1_0008254:1..1379 .
Chr13:49840680..49843165 -
Homology
BLAST of g.arboreum_cottongen_reftransV1_0008254 vs. ExPASy TrEMBL
Match: A0A0B0MZ94_GOSAR (tRNA (Ile)-lysidine synthase OS=Gossypium arboreum GN=F383_34300 PE=4 SV=1)

HSP 1 Score: 577.4 bits (1487), Expect = 0.000e+0
Identity = 343/343 (100.00%), Postives = 343/343 (100.00%), Query Frame = -2
Query:  242 MVAISLYRGNLHRAPEVSWRWLMPTPKISLKDFKXXXXXXXXXXXXXXXXXXXXXXXXXXLKHQIQSPVSCEPPIEPKLKAKLEPEPSEGLKTGPPLQEVKVDIVGGSDGGGCLVKSEDEQTEKDINLQVDEKPPEEAKTNVEVSDKINDFNGKEKRKRDVEEKLQVLNAKKHSLVQVLKQILNAEEELKRRNGTQGTVNRPAVPLQVETTNDSGSMTRLVTPRMGLDANLAGENDGVEADDVSNHNVHSRHVFXXXXXXXXXXXXXXXPTYIQHNVVSHPSRTSMGVTGSPSRFAPTGNQGHPGNPPTVSVSGTNFVXXXXXXXXSGGTSVLREAWQPSPWN 1270
            MVAISLYRGNLHRAPEVSWRWLMPTPKISLKDFKSLLHRRDRALSRLRSSSSSNPSPNSVLKHQIQSPVSCEPPIEPKLKAKLEPEPSEGLKTGPPLQEVKVDIVGGSDGGGCLVKSEDEQTEKDINLQVDEKPPEEAKTNVEVSDKINDFNGKEKRKRDVEEKLQVLNAKKHSLVQVLKQILNAEEELKRRNGTQGTVNRPAVPLQVETTNDSGSMTRLVTPRMGLDANLAGENDGVEADDVSNHNVHSRHVFRMSSTSPSSESPLRRPTYIQHNVVSHPSRTSMGVTGSPSRFAPTGNQGHPGNPPTVSVSGTNFVASSPSPAASGGTSVLREAWQPSPWN
Sbjct:    1 MVAISLYRGNLHRAPEVSWRWLMPTPKISLKDFKSLLHRRDRALSRLRSSSSSNPSPNSVLKHQIQSPVSCEPPIEPKLKAKLEPEPSEGLKTGPPLQEVKVDIVGGSDGGGCLVKSEDEQTEKDINLQVDEKPPEEAKTNVEVSDKINDFNGKEKRKRDVEEKLQVLNAKKHSLVQVLKQILNAEEELKRRNGTQGTVNRPAVPLQVETTNDSGSMTRLVTPRMGLDANLAGENDGVEADDVSNHNVHSRHVFRMSSTSPSSESPLRRPTYIQHNVVSHPSRTSMGVTGSPSRFAPTGNQGHPGNPPTVSVSGTNFVASSPSPAASGGTSVLREAWQPSPWN 343          
BLAST of g.arboreum_cottongen_reftransV1_0008254 vs. ExPASy TrEMBL
Match: A0A0D2R7Q7_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_010G139000 PE=4 SV=1)

HSP 1 Score: 551.592 bits (1420), Expect = 0.000e+0
Identity = 327/343 (95.34%), Postives = 332/343 (96.79%), Query Frame = -2
Query:  242 MVAISLYRGNLHRAPEVSWRWLMPTPKISLKDFKXXXXXXXXXXXXXXXXXXXXXXXXXXLKHQIQSPVSCEPPIEPKLKAKLEPEPSEGLKTGPPLQEVKVDIVGGSDGGGCLVKSEDEQTEKDINLQVDEKPPEEAKTNVEVSDKINDFNGKEKRKRDVEEKLQVLNAKKHSLVQVLKQILNAEEELKRRNGTQGTVNRPAVPLQVETTNDSGSMTRLVTPRMGLDANLAGENDGVEADDVSNHNVHSRHVFXXXXXXXXXXXXXXXPTYIQHNVVSHPSRTSMGVTGSPSRFAPTGNQGHPGNPPTVSVSGTNFVXXXXXXXXSGGTSVLREAWQPSPWN 1270
            MVAISLYRGNLHR PEVS RWLMPTPKISL+DFKSLLHRRDRALSRLRSSSSSNP+ NS LK+QIQSPVSCEPPIEPKLKAKLEPEPSEGLKTGPPLQEVKVDIVGGSDG  CLVKSEDEQTEKD+NLQVDEK PEEAKTN+EVSDKINDFNGKE RKRDVEEKLQVLNAKKHSLVQVLKQILNAEEELKRRN TQGTVNRPAVP QVETTNDSGSMTRLVTPRMGLDANLAGENDGVEADDVSNHNVHSRHVFRMSSTSPSSESPLRRPTYIQHNV SHPSRTSMGVTGSPSRFAPTGNQGHPGNPPTVSVSGTNFVASSPSPAASGGTSVLREAWQPSPWN
Sbjct:    1 MVAISLYRGNLHRTPEVSRRWLMPTPKISLRDFKSLLHRRDRALSRLRSSSSSNPNSNSALKYQIQSPVSCEPPIEPKLKAKLEPEPSEGLKTGPPLQEVKVDIVGGSDGRDCLVKSEDEQTEKDVNLQVDEKLPEEAKTNLEVSDKINDFNGKETRKRDVEEKLQVLNAKKHSLVQVLKQILNAEEELKRRNSTQGTVNRPAVPFQVETTNDSGSMTRLVTPRMGLDANLAGENDGVEADDVSNHNVHSRHVFRMSSTSPSSESPLRRPTYIQHNVASHPSRTSMGVTGSPSRFAPTGNQGHPGNPPTVSVSGTNFVASSPSPAASGGTSVLREAWQPSPWN 343          
BLAST of g.arboreum_cottongen_reftransV1_0008254 vs. ExPASy TrEMBL
Match: S1RW18_THECC (Uncharacterized protein isoform 1 OS=Theobroma cacao GN=TCM_045716 PE=4 SV=1)

HSP 1 Score: 426.017 bits (1094), Expect = 2.520e-143
Identity = 258/346 (74.57%), Postives = 283/346 (81.79%), Query Frame = -2
Query:  242 MVAISLYRGNLHRAPEVSWRWLMPTPKISLKDFKX---XXXXXXXXXXXXXXXXXXXXXXXXXLKHQIQSPVSCEPPIEPKLKAKLEPEPSEGLKTGPPLQEVKVDIVGGSDGGGCLVKSEDEQTEKDINLQVDEKPPEEAKTNVEVSDKINDFNGKEKRKRDVEEKLQVLNAKKHSLVQVLKQILNAEEELKRRNGTQGTVNRPAVPLQVETTNDSGSMTRLVTPRMGLDANLAGENDGVEADDVSNHNVHSRHVFXXXXXXXXXXXXXXXPTYIQHNVVSHPSRTSMGVTGSPSRFAPTGNQGHPGNPPTVSVSGTNFVXXXXXXXXSGGTSVLREAWQPSPWN 1270
            MVAISLYRGNLHRAP +  RWLMPTPKISL+DFKS     ++    L    SS + NP+P S LK  IQSP     PIEPKL A+++PEP + L  GP    VKV+++GGSDGG C VK EDEQ EKD  LQVDEK PEE K NVEVS+K+N+ N KEKRKRDVEEKLQ+LNAKKH+LVQVLKQILNAEEELKRRN   G   RPAVPLQVET NDSGS+TR+VTPRMG +ANLAGEN+  EADDVSN NVH+RHVFRMSSTSPSSESPLRRPTYIQHNVV HPSR SMGVTGSPSRFAPTGNQGHPGNPP VSVSGTN+VASSPSPAASGG+SV REA QPSPWN
Sbjct:    1 MVAISLYRGNLHRAPAIPRRWLMPTPKISLEDFKSLLHRRNKALSRLRSSSSSCNPNPNPASNLKPHIQSPKPNGLPIEPKLGAQVDPEPPQDLTAGPTSAVVKVEVLGGSDGGDCSVKQEDEQPEKDETLQVDEKLPEETKANVEVSEKVNELNEKEKRKRDVEEKLQILNAKKHNLVQVLKQILNAEEELKRRNSPPGMAIRPAVPLQVETMNDSGSITRIVTPRMGSEANLAGENEVGEADDVSNANVHNRHVFRMSSTSPSSESPLRRPTYIQHNVVPHPSRASMGVTGSPSRFAPTGNQGHPGNPPAVSVSGTNYVASSPSPAASGGSSVFREARQPSPWN 346          
BLAST of g.arboreum_cottongen_reftransV1_0008254 vs. ExPASy TrEMBL
Match: S1SI09_THECC (Uncharacterized protein isoform 2 OS=Theobroma cacao GN=TCM_045716 PE=4 SV=1)

HSP 1 Score: 319.316 bits (817), Expect = 5.036e-102
Identity = 199/281 (70.82%), Postives = 222/281 (79.00%), Query Frame = -2
Query:  437 MVAISLYRGNLHRAPEVSWRWLMPTPKISLKDFKX---XXXXXXXXXXXXXXXXXXXXXXXXXLKHQIQSPVSCEPPIEPKLKAKLEPEPSEGLKTGPPLQEVKVDIVGGSDGGGCLVKSEDEQTEKDINLQVDEKPPEEAKTNVEVSDKINDFNGKEKRKRDVEEKLQVLNAKKHSLVQVLKQILNAEEELKRRNGTQGTVNRPAVPLQVETTNDSGSMTRLVTPRMGLDANLAGENDGVEADDVSNHNVHSRHVFXXXXXXXXXXXXXXXPTYIQHNVV 1270
            MVAISLYRGNLHRAP +  RWLMPTPKISL+DFKS     ++    L    SS + NP+P S LK  IQSP     PIEPKL A+++PEP + L  GP    VKV+++GGSDGG C VK EDEQ EKD  LQVDEK PEE K NVEVS+K+N+ N KEKRKRDVEEKLQ+LNAKKH+LVQVLKQILNAEEELKRRN   G   RPAVPLQVET NDSGS+TR+VTPRMG +ANLAGEN+  EADDVSN NVH+RHVFRMSSTSPSSESPLRRPTYIQHNV 
Sbjct:    1 MVAISLYRGNLHRAPAIPRRWLMPTPKISLEDFKSLLHRRNKALSRLRSSSSSCNPNPNPASNLKPHIQSPKPNGLPIEPKLGAQVDPEPPQDLTAGPTSAVVKVEVLGGSDGGDCSVKQEDEQPEKDETLQVDEKLPEETKANVEVSEKVNELNEKEKRKRDVEEKLQILNAKKHNLVQVLKQILNAEEELKRRNSPPGMAIRPAVPLQVETMNDSGSITRIVTPRMGSEANLAGENEVGEADDVSNANVHNRHVFRMSSTSPSSESPLRRPTYIQHNVC 281          
BLAST of g.arboreum_cottongen_reftransV1_0008254 vs. ExPASy TrEMBL
Match: M5WUN6_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa007601mg PE=4 SV=1)

HSP 1 Score: 276.944 bits (707), Expect = 6.793e-85
Identity = 201/364 (55.22%), Postives = 245/364 (67.31%), Query Frame = -2
Query:  242 MVAISLYRGNLHRAPEVSWRWLMPTPKISLKDFKXXXXXXXXXXXXXXXXXXXXXXXXXXLKHQIQSPVSCEPPI----EPKLKAKLEPEPSEGLKTGPPL----------QEVKVDIVGGSDGGGCLVKSEDEQTEKDINLQVD------EKPPEEAKTNVEVSDKINDFNGKEKRKRDVEEKLQVLNAKKHSLVQVLKQILNAEEELKRRNGTQGTVNRPAVPLQVETTNDSGSMTRLVTPRMGLDANLAGENDGVEADDVSNHNVHSRHVFXXXXXXXXXXXXXXXPTYIQHNVVSHPSRTSMGVTG-SPSRFAPTGNQGHPGNPPTVSVSGTNFVXXXXXXXXSGGTSVLREAWQPSPWN 1270
            MVAISLYRGNLHR P+V  RWLMPTPKISLKDFKSLL RR  ALSR+RS+  +  S  +     +   ++  P +     PK+K +         + GP             +  V  V GSD          E+    +++ V+      EK  EE K N E  +K +  + K+KRKR+VEEKLQVLN +KH++VQVLKQ+LNAEEELKRR+G QG V RP+V LQV+ TNDSGSMTR    R+G +ANL  E +G E D+ SNHN HSRH+FRM+STSPSSESPLRRPT+IQHNVVSHPSR  +G TG SPSRFAP G+QG+P   PT+SVSGTN++ASSPSPAASGGTS  R+A  PSPWN
Sbjct:    1 MVAISLYRGNLHRVPDVPRRWLMPTPKISLKDFKSLLTRRSIALSRVRSTLPATSSNPNPNPSFVSEQLNEAPKMNTLTHPKIKFEAPENVVADCEAGPSGVDKDEKQSDGADFTVKPVDGSDASPAFKPDLPEKGSDAVDVGVNSPAVKVEKVDEEGKPNSEAHNKEDVLDEKQKRKREVEEKLQVLNQRKHTIVQVLKQMLNAEEELKRRSGMQGMVVRPSVSLQVDVTNDSGSMTRHAAARLGSEANL--EMEGCEGDEHSNHNFHSRHIFRMNSTSPSSESPLRRPTHIQHNVVSHPSRAILGATGSSPSRFAPAGHQGNPATLPTLSVSGTNYMASSPSPAASGGTSAFRDARLPSPWN 362          
BLAST of g.arboreum_cottongen_reftransV1_0008254 vs. ExPASy TrEMBL
Match: A5C7N2_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_17s0000g05390 PE=4 SV=1)

HSP 1 Score: 273.478 bits (698), Expect = 1.098e-83
Identity = 194/390 (49.74%), Postives = 232/390 (59.49%), Query Frame = -2
Query:  242 MVAISLYRGNLHRAPEVSWRWLMPTPKISLKDFKXXXXXXXXXXXXXXXXXXXXXXXXXXLKHQIQSPVSCEP-PIEPKLKAKLEPEPSEGLKT-GPPLQEVKVDIVG--------------------GSDGGGCLVKS-------------------------EDEQTEKDINLQVDEKPPEEAKTNVEVSDKINDFNGKEKRKRDVEEKLQVLNAKKHSLVQVLKQILNAEEELKRRNGTQGTVNRPAVPLQVETTNDSGSMTRLVTPRMGLDANLAGENDGVEADDVSNHNVHSRHVFXXXXXXXXXXXXXXXPTYIQHNVVSHPSRTSMGVTGSPSRFAPTGNQGHPGNPPTVSVSGTNFVXXXXXXXXSGGTSVLREAWQPSPWN 1270
            MVAISLYRGNLHR P+V+ RWLMPT  ISLKDF+SLL RR  ALS                + +  +  S  P PI  K+K + E EP+  +     P +E    ++                     GSDG  C+ KS                          + Q EK +   V + P  EA  NV   D +ND   +EKRKR++EEKLQ+LNAKKH+LVQVLKQILNAEEELKRRN  QG   RP+ PL ++TTNDSGS+TR VTPR+G DANL GE +G E DD+SNHN+HSRH+    S++  S     R  YIQHN V HPSR     TGSPSRFAP  +Q HP N PTVSVSGTN++ASSPSPAASGGTSV R+A  PSPWN
Sbjct:    1 MVAISLYRGNLHRVPDVTRRWLMPTNGISLKDFRSLLSRRSAALS----------------RLRSAAGTSSNPNPILHKVKLEKEEEPTNAIGCPARPQEEQPPKVINPEEEEEEEKPALNGKGKEGKGSDGDDCVAKSVGVSGSSPGSNPIVPGNASDPADGHGNSQGEKAV--AVSQNPNLEANKNV---DAVND---QEKRKREIEEKLQILNAKKHNLVQVLKQILNAEEELKRRNNMQGMTIRPSGPLHIDTTNDSGSLTRQVTPRLGSDANLGGEMEGGEPDDISNHNMHSRHLL-RMSSTSPSSDSPLRRPYIQHNAVPHPSR----ATGSPSRFAPIVHQSHPANLPTVSVSGTNYIASSPSPAASGGTSVFRDARLPSPWN 361          
BLAST of g.arboreum_cottongen_reftransV1_0008254 vs. ExPASy TrEMBL
Match: A0A067KH81_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_11555 PE=4 SV=1)

HSP 1 Score: 265.774 bits (678), Expect = 1.168e-80
Identity = 203/367 (55.31%), Postives = 249/367 (67.85%), Query Frame = -2
Query:  242 MVAISLYRGNLHRAPEVSWRWLMPTPKISLKDFKXXXXXXXXXXXXXXXXXXXXXXXXXXLKHQIQSPVSCEP--PIEPKLKA-KLEPEPSEGLKTGPPLQEVKVDIVGGSDGGGCLVKSED--------------EQTEKDINLQVDEKPPEE-------AKTNVEVSDKINDFNGKEKRKRDVEEKLQVLNAKKHSLVQVLKQILNAEEELKRRNGTQGTVNRPAVPLQVETTNDSGSMTRLVTPRMGLDANLAGENDGVEADDVSNHNVHSRHVFXXXXXXXXXXXXXXXPTYIQHNVVSHPSRTSMGVTGSPSRFAPTGNQGHPGNPPTVSVSGTNFVXXXXXXXXSGGTSVLREAWQPSPWN 1270
            MVAISLYRGNLHR P+V  RWLMP  +ISLKDFKSLL RR +ALSRLR S+++  + ++        P + E   PI P+LK  K+     EG   G   +EVK  +  G + G C V+  D              E++++ +    + +P +E        +T +  +D IN  + KE RK++VEEKL VLN KKHSLVQVLKQILN EEELKRRN  QG   RP+VPLQV+ TNDSGS++R  TPRMG +ANL G+ +G E +DVS  +  SRH+ RMSSTSPSSESPLR+P YIQHNVV HPSR S+G T SPSRFA TG+QG P + PTVSVSGTN+VASSPSPAASGGTS  R+A QPSPWN
Sbjct:    1 MVAISLYRGNLHRVPDVPRRWLMPARQISLKDFKSLLDRRSKALSRLRPSTNAVATTSNHNPKPNPDPNTKENGIPITPELKVDKVNNNEEEGTSNGLVSEEVKDQV--GLEYGECSVRPADVSNSLLPPEKPEVAEKSDEAVTGDGNLRPRKEDLSVNPNTETEMCKTDVIN--HDKENRKKEVEEKLLVLNEKKHSLVQVLKQILNVEEELKRRNSVQGMAIRPSVPLQVDVTNDSGSLSRHATPRMGSEANLGGDMEGAETEDVSKPSNQSRHIHRMSSTSPSSESPLRKPPYIQHNVVPHPSRPSLGATSSPSRFALTGHQGPPASVPTVSVSGTNYVASSPSPAASGGTSAFRDARQPSPWN 363          
BLAST of g.arboreum_cottongen_reftransV1_0008254 vs. ExPASy TrEMBL
Match: B9I329_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0012s07460g PE=4 SV=1)

HSP 1 Score: 255.758 bits (652), Expect = 7.528e-77
Identity = 196/365 (53.70%), Postives = 239/365 (65.48%), Query Frame = -2
Query:  242 MVAISLYRGNLHRAPEVSWRWLMPTPKISLKDFKXXXXXXXXXXXXXXXXXXXXXXXXXXLKHQIQSPVSCEPPIEPKLKA----------KLEPEPSEGLKTGPPL------QEVKVDIVGGSDGGGCLVKSEDEQTEKDINLQVDEKPPEEAKT-NVEVSDKINDFN-GKEKRKRDVEEKLQVLNAKKHSLVQVLKQILNAEEELKRRNGTQGTVNRPAVPLQVETTNDSGSMTRLVTPRMGLDANLAGENDGVEADDVSNHNVHSRHVFXXXXXXXXXXXXXXXPT--YIQHNVVSHPSRTSMGVTGSPSRFAPTGNQGHPGNPPTVSVSGTNF--VXXXXXXXXSGGTSVLREAWQPSPWN 1270
            MVAISLYRGNLH   +V  RWLMPTPKIS +DFK+L HRR +AL RLRS+++SNP+ N + K           PIEPKL+A            E E +E  K G         ++ K D+  G DG    +K  D+    D N    +KP + A   +VE     N+ +  KEKRKR++E+KLQVLNAKKH+LV+ LKQILN EEELKRRN TQG   RP+V LQV+ +NDSGSMTR  TPRMG +AN  G+ +G EA+D+SNHN HSRHV RMSSTSPS  S        YIQ NVV HPSR+ +G +GSPSRFAP G+ GHP N PT+SVSGT +   + SPSPAASGGTS  ++A  PSPWN
Sbjct:    1 MVAISLYRGNLHSVADVPRRWLMPTPKISPRDFKTLCHRRSKALCRLRSTTTSNPNSNHIEK----------APIEPKLEAVEEEIVANNNGKEAEQAEDCKGGGDGGASSSREDEKDDV--GLDGADFSMKPADDAVNGDPNPNNLQKPDDVANNPSVETKSNANELDEEKEKRKREIEDKLQVLNAKKHNLVKALKQILNVEEELKRRNSTQGMPVRPSVQLQVDVSNDSGSMTRHPTPRMGSEANPGGDIEGGEAEDISNHNTHSRHVHRMSSTSPSPSSESPLRRPPYIQPNVVPHPSRSGLGTSGSPSRFAPMGHHGHPLNLPTLSVSGTYYAASSPSPSPAASGGTSAFKDARHPSPWN 353          
BLAST of g.arboreum_cottongen_reftransV1_0008254 vs. ExPASy TrEMBL
Match: A0A0A0LRK8_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G008420 PE=4 SV=1)

HSP 1 Score: 232.261 bits (591), Expect = 1.764e-67
Identity = 191/394 (48.48%), Postives = 233/394 (59.14%), Query Frame = -2
Query:  242 MVAISLYRGNLHRAPEVSWRWLMPTPKISLKDFKXXXXXXXXXXXXXXXXXXXXXXXXXXLKHQIQSPVSCEPPIEPKLKAKLEPEP-------SEGLKTGP---------PLQEVKVDIVG-----------GSD-GGGCLVKSED-------------EQTE----------KDINLQVDEKPPEEAKTNVEVSDKINDFNGKEKRKRDVEEKLQVLNAKKHSLVQVLKQILNAEEELKRRNGTQGTVNRPAVPLQVETTNDSGSMTRLVTPRMGLDANLAGENDGVEADDVSNHNVHSRHVFXXXXXXXXXXXXXXXPTYIQHNVVSHPSRTSMGVTGSPSRFAPTGNQGHPGNPPTVSVSGTNFVXXXXXXXXSGGTSVLREAWQPSPWN 1270
            MVAISLYRGNLHR P++  RWLMPT  IS+KDFKSLLHRR +ALS                  ++++P S  P    KL     P P       S+G   GP         PL+  +V + G            SD G  C+ KS D             EQ            KD N  V E P      N E + + +  + KE RKR+VEEKL+VLN KKH+LVQVLKQIL+ EEELKRR+  QGT  RP+ PLQV+ + D+GSMTR +  R+G + N +G  +G EADD+ N N  +R + R SS SPSSESPLRRP +IQ N+ SHPSRT++ +TGSPS   P G  G P N PTVSVSGTN+VASSPSPAASGG+SVLR+A QPSPWN
Sbjct:   24 MVAISLYRGNLHRVPDIPRRWLMPTHNISIKDFKSLLHRRSKALS------------------RLRAPASSSPA---KLSTSPNPNPITNSLVKSDG--DGPRNNGSAPEVPLESHRVSVGGERPSALVKERKKSDIGDNCIGKSGDGFDSFNGSKPCFAEQGSNPVENGGAHAKDKNPAVSENP------NTEANKEEDLLDDKEDRKREVEEKLKVLNEKKHNLVQVLKQILHVEEELKRRSTVQGTAIRPSAPLQVDASADTGSMTRQLASRVGSEVNASGYIEGGEADDLLNQNFLARQMLRNSSMSPSSESPLRRPVHIQPNMGSHPSRTNLSITGSPSCLPPAGQSGLPPNLPTVSVSGTNYVASSPSPAASGGSSVLRDARQPSPWN 388          
BLAST of g.arboreum_cottongen_reftransV1_0008254 vs. ExPASy TrEMBL
Match: A0A067FR52_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g017821mg PE=4 SV=1)

HSP 1 Score: 230.335 bits (586), Expect = 4.880e-67
Identity = 189/368 (51.36%), Postives = 232/368 (63.04%), Query Frame = -2
Query:  242 MVAISLYRGNLHRAPEVSWRWLMPTPKISLKDFKXXXXXXXXXXXXXXXXXXXXXXXXXXLKHQIQSPVSCEPPIEPKLKAKLEPEPSEGLKTGPPLQEVKV---DIV--GGSDGGGCLVKSE---DEQT---------EKDINLQVDEKPPEEAKT-------NVEVSDKINDFNGKEKRKRDVEEKLQVLNAKKHSLVQVLKQILNAEEELKRRNGTQGTVNRPAVPLQVETTNDSGSMTRLVTPRMGLDANLAGENDGVEADDVSNHNVHSRHVFXXXXXXXXXXXXXXXPTYIQHNVVSHPSRTSMGVTGSPSRFAPTG-NQGHPGNPPTVSVSGTNFVXXXXXXXXSGGTSVLREAWQPSPWN 1270
            MVA+SLYRGNLHR P+V  RWLMP  +IS   FK      +R    L      + +  + +     S    E        + L+ +  EG +     +E  V   +I+  G  D G C  K E   D +          EK  +L V EK  E  ++       NV+ S+K +   GKEKRK+++EEKL+ LNAKKH+LVQ LKQ+L+AEEELKRRN TQG V RP  PLQV+ T++SG M R  TPR G +ANL G+ +G EA+D SN N HSRH+ RMSS SPSSESPLRRPT +QHNVV HPSR S+ VTGSPSRFAP G +QG+ GN PTV VSGTN+VASSPSPAASGGTSV R+A QPSPWN
Sbjct:    1 MVALSLYRGNLHRVPDVPRRWLMPAARIS---FKDFKTLLNRRNRALSRLRQHSLAAGNAITSNPNSNCKQEDEAVKPNGSSLQVQLDEGKEGNCREEERNVKNEEIMDRGKLDDGDCSEKPEPVDDAEVAAVFKVDGDEKLQSLDVVEKAAEPVESADPASNPNVQTSNKPDVLYGKEKRKKEIEEKLETLNAKKHNLVQALKQLLSAEEELKRRNCTQGMVIRPTGPLQVDVTSESGLMARQTTPRTGSEANLVGDTEGAEAEDASNQNAHSRHMLRMSSMSPSSESPLRRPTILQHNVVPHPSRASLAVTGSPSRFAPPGHHQGNSGNLPTVCVSGTNYVASSPSPAASGGTSVFRDARQPSPWN 365          
The following BLAST results are available for this feature:
BLAST of g.arboreum_cottongen_reftransV1_0008254 vs. ExPASy TrEMBL
Analysis Date: 2016-11-15 (Homology Analysis for Gossypium arboreum CottonGen RefTrans V1 vs TrEMBL)
Total hits: 25
Match NameE-valueIdentityDescription
A0A0B0MZ94_GOSAR0.000e+0100.00tRNA (Ile)-lysidine synthase OS=Gossypium arboreum... [more]
A0A0D2R7Q7_GOSRA0.000e+095.34Uncharacterized protein OS=Gossypium raimondii GN=... [more]
S1RW18_THECC2.520e-14374.57Uncharacterized protein isoform 1 OS=Theobroma cac... [more]
S1SI09_THECC5.036e-10270.82Uncharacterized protein isoform 2 OS=Theobroma cac... [more]
M5WUN6_PRUPE6.793e-8555.22Uncharacterized protein OS=Prunus persica GN=PRUPE... [more]
A5C7N2_VITVI1.098e-8349.74Putative uncharacterized protein OS=Vitis vinifera... [more]
A0A067KH81_JATCU1.168e-8055.31Uncharacterized protein OS=Jatropha curcas GN=JCGZ... [more]
B9I329_POPTR7.528e-7753.70Uncharacterized protein OS=Populus trichocarpa GN=... [more]
A0A0A0LRK8_CUCSA1.764e-6748.48Uncharacterized protein OS=Cucumis sativus GN=Csa_... [more]
A0A067FR52_CITSI4.880e-6751.36Uncharacterized protein OS=Citrus sinensis GN=CISI... [more]

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BLAST of g.arboreum_cottongen_reftransV1_0008254 vs. ExPASy Swiss-Prot
Analysis Date: 2016-11-15 (Homology Analysis for Gossypium arboreum CottonGen RefTrans V1 vs SwissProt)
Total hits: 0
Match NameE-valueIdentityDescription
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InterPro
Analysis Name: InterProScan analysis for Gossypium arboreum CottonGen RefTrans V1
Date Performed: 2016-11-14
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 151..171
NoneNo IPR availablePANTHERPTHR36764FAMILY NOT NAMEDcoord: 2..343
NoneNo IPR availablePANTHERPTHR36764:SF1SUBFAMILY NOT NAMEDcoord: 2..343

Sequences
The following sequences are available for this feature:

contig sequence

>g.arboreum_cottongen_reftransV1_0008254 ID=g.arboreum_cottongen_reftransV1_0008254; Name=g.arboreum_cottongen_reftransV1_0008254; organism=Gossypium arboreum; type=contig; length=1379bp
AGAGAATGGAAGAAATCCAAAAGAAAAATGAAAAAAAAGAAGAAGCTTCA
ACTTCAATAAATGGCTAACAAGTAAAAGGCGGCATCTCCACAGACCTGAT
AATATTATATGAAATTGAGAACCGATGTTCTCGCTTTGATTAAGCAGGAA
GAACTAGAAAGGGCTTACAATGTTGCCAAGCTCGCAATACACATCTTAGA
GGCTCAAGTCACAAGAAAAGTTCAATTTGCTACAGATTCTAATTCCATGG
GCTTGGCTGCCAAGCCTCTCGTAAGACTGAAGTGCCACCAGATGCTGCAG
GGGAAGGAGATGATGCAACGAAATTTGTTCCTGACACAGATACGGTGGGA
GGATTCCCAGGATGACCTTGATTTCCAGTAGGAGCAAAACGTGAAGGACT
ACCTGTGACCCCCATGCTTGTTCGAGAAGGGTGGGAAACCACATTATGTT
GAATGTAGGTAGGCCTTCTAAGAGGAGATTCTGAAGATGGAGATGTACTG
CTCATCCGAAACACATGACGAGAATGAACGTTATGGTTTGAAACATCATC
AGCTTCAACTCCATCATTTTCACCAGCAAGATTAGCATCCAAGCCCATCC
GAGGAGTGACAAGCCTCGTCATTGACCCTGAGTCATTTGTGGTTTCCACT
TGAAGTGGAACGGCTGGACGATTCACTGTACCTTGTGTGCCATTTCTTCT
CTTCAACTCCTCCTCTGCATTCAAGATCTGCTTTAGTACTTGTACTAAAC
TATGCTTTTTTGCATTCAAAACCTGTAATTTCTCCTCAACATCCCTTTTC
CTTTTTTCTTTTCCATTGAAATCATTTATTTTATCGCTTACCTCTACATT
TGTTTTAGCCTCCTCAGGCGGCTTCTCATCCACTTGCAAATTGATATCTT
TCTCGGTCTGCTCATCTTCCGACTTCACCAAACAACCTCCACCGTCGGAT
CCTCCAACTATGTCCACCTTGACCTCCTGGAGAGGTGGTCCAGTTTTCAA
ACCCTCGGACGGTTCAGGTTCCAGTTTGGCTTTCAATTTCGGCTCAATAG
GAGGCTCACAGGACACGGGAGATTGAATTTGATGCTTTAAAACAGAGTTA
GGGCTAGGGTTAGAAGAAGAAGAGGAACGGAGACGAGAGAGAGCTCTGTC
GCGGCGGTGCAAGAGAGATTTGAAGTCTTTGAGAGAGATTTTGGGAGTCG
GCATTAGCCAGCGCCAAGATACCTCCGGTGCTCTGTGGAGGTTCCCTCTG
TACAAAGAAATCGCCACCATTTTTGTGGCATAATCGAAAATAAAATTTTA
CGGTTATGGATATTATCTCAGGCTTTTCCGTAATAACCGCATTCAACAAA
CGACTGTTGCACGGCTTGCGAGAGCAAAT
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