g.arboreum_cottongen_reftransV1_0008171, g.arboreum_cottongen_reftransV1_0008171 (contig) Gossypium arboreum
Overview
Alignments
The following features are aligned
Analyses
This contig is derived from or has results from the following analyses
Homology
BLAST of g.arboreum_cottongen_reftransV1_0008171 vs. ExPASy TrEMBL
Match: A0A0B0NS35_GOSAR (Serine/threonine-protein kinase HT1 OS=Gossypium arboreum GN=F383_08472 PE=4 SV=1) HSP 1 Score: 281.952 bits (720), Expect = 2.937e-89 Identity = 153/153 (100.00%), Postives = 153/153 (100.00%), Query Frame = -3 Query: 2 STVDKPKXXXXXXXXXXXXXLNIQEAHAFSTVDGYSLDVFVVDGWPFEETKELKDALEKEILKSKEQSCVRKSSISAMTGLVKEEAVSLPNCVEIPTDGTDVWEIDSRQLKIEHKIASGSYGDLYRGTYYSQEVAIKVLKPERVTGELLREFS 460 STVDKPKLLSQLTSLLAELGLNIQEAHAFSTVDGYSLDVFVVDGWPFEETKELKDALEKEILKSKEQSCVRKSSISAMTGLVKEEAVSLPNCVEIPTDGTDVWEIDSRQLKIEHKIASGSYGDLYRGTYYSQEVAIKVLKPERVTGELLREFS Sbjct: 181 STVDKPKLLSQLTSLLAELGLNIQEAHAFSTVDGYSLDVFVVDGWPFEETKELKDALEKEILKSKEQSCVRKSSISAMTGLVKEEAVSLPNCVEIPTDGTDVWEIDSRQLKIEHKIASGSYGDLYRGTYYSQEVAIKVLKPERVTGELLREFS 333
BLAST of g.arboreum_cottongen_reftransV1_0008171 vs. ExPASy TrEMBL
Match: A0A0D2REG1_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_003G005100 PE=4 SV=1) HSP 1 Score: 280.026 bits (715), Expect = 2.834e-88 Identity = 152/153 (99.35%), Postives = 153/153 (100.00%), Query Frame = -3 Query: 2 STVDKPKXXXXXXXXXXXXXLNIQEAHAFSTVDGYSLDVFVVDGWPFEETKELKDALEKEILKSKEQSCVRKSSISAMTGLVKEEAVSLPNCVEIPTDGTDVWEIDSRQLKIEHKIASGSYGDLYRGTYYSQEVAIKVLKPERVTGELLREFS 460 STVDKPKLLSQLTSLLAELGLNIQEAHAFSTVDGYSLDVFVVDGWPFEETKELKDALEKEILKS+EQSCVRKSSISAMTGLVKEEAVSLPNCVEIPTDGTDVWEIDSRQLKIEHKIASGSYGDLYRGTYYSQEVAIKVLKPERVTGELLREFS Sbjct: 181 STVDKPKLLSQLTSLLAELGLNIQEAHAFSTVDGYSLDVFVVDGWPFEETKELKDALEKEILKSQEQSCVRKSSISAMTGLVKEEAVSLPNCVEIPTDGTDVWEIDSRQLKIEHKIASGSYGDLYRGTYYSQEVAIKVLKPERVTGELLREFS 333
BLAST of g.arboreum_cottongen_reftransV1_0008171 vs. ExPASy TrEMBL
Match: A0A061DGE3_THECC (ACT-like protein tyrosine kinase family protein OS=Theobroma cacao GN=TCM_000116 PE=4 SV=1) HSP 1 Score: 234.572 bits (597), Expect = 7.237e-71 Identity = 129/153 (84.31%), Postives = 141/153 (92.16%), Query Frame = -3 Query: 2 STVDKPKXXXXXXXXXXXXXLNIQEAHAFSTVDGYSLDVFVVDGWPFEETKELKDALEKEILKSKEQSCVRKSSISAMTGLVKEEAVSLPNCVEIPTDGTDVWEIDSRQLKIEHKIASGSYGDLYRGTYYSQEVAIKVLKPERVTGELLREFS 460 STVD+PKLLSQLTS LAE+GLNIQEAHAFSTVDGYSLDVFVVDGWPFEET+EL++ALEKEILKSKE+ RKSSISAMT +KE +SLP+CVEIPTDGTDVWEID+RQLK E+KIASGSYGDLYRGTY SQEVAIKVLKPE VT E+LREFS Sbjct: 186 STVDRPKLLSQLTSFLAEIGLNIQEAHAFSTVDGYSLDVFVVDGWPFEETEELRNALEKEILKSKEKCYSRKSSISAMTEHIKEGVISLPDCVEIPTDGTDVWEIDTRQLKFENKIASGSYGDLYRGTYCSQEVAIKVLKPECVTEEMLREFS 338
BLAST of g.arboreum_cottongen_reftransV1_0008171 vs. ExPASy TrEMBL
Match: A0A0D2THR8_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_007G190200 PE=4 SV=1) HSP 1 Score: 224.557 bits (571), Expect = 4.696e-67 Identity = 127/153 (83.01%), Postives = 139/153 (90.85%), Query Frame = -3 Query: 2 STVDKPKXXXXXXXXXXXXXLNIQEAHAFSTVDGYSLDVFVVDGWPFEETKELKDALEKEILKSKEQSCVRKSSISAMTGLVKEEAVSLPNCVEIPTDGTDVWEIDSRQLKIEHKIASGSYGDLYRGTYYSQEVAIKVLKPERVTGELLREFS 460 STVD+PKLLSQLTSLLAE+GLNIQEAHAFST DGYSLDVFVVDGWP EE +ELK+ALEKEILKSKEQS RKSS+ MT VKE VSLP+CVEIPTDGTDVWEID+RQLKIE++IASGSY DLYRGTY SQEVAIKVLKPE++T E+LREFS Sbjct: 186 STVDRPKLLSQLTSLLAEIGLNIQEAHAFSTTDGYSLDVFVVDGWPSEEIEELKNALEKEILKSKEQSYSRKSSV--MTEHVKERVVSLPSCVEIPTDGTDVWEIDARQLKIENRIASGSYADLYRGTYCSQEVAIKVLKPEQITREMLREFS 336
BLAST of g.arboreum_cottongen_reftransV1_0008171 vs. ExPASy TrEMBL
Match: A0A0D2SMR5_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_007G190200 PE=4 SV=1) HSP 1 Score: 220.32 bits (560), Expect = 1.784e-65 Identity = 127/155 (81.94%), Postives = 139/155 (89.68%), Query Frame = -3 Query: 2 STVDKPKXXXXXXXXXXXXXLNIQEAHAFSTVDGYSLDVFVVDGWPFEETKELKDALEKEILKSK--EQSCVRKSSISAMTGLVKEEAVSLPNCVEIPTDGTDVWEIDSRQLKIEHKIASGSYGDLYRGTYYSQEVAIKVLKPERVTGELLREFS 460 STVD+PKLLSQLTSLLAE+GLNIQEAHAFST DGYSLDVFVVDGWP EE +ELK+ALEKEILKSK EQS RKSS+ MT VKE VSLP+CVEIPTDGTDVWEID+RQLKIE++IASGSY DLYRGTY SQEVAIKVLKPE++T E+LREFS Sbjct: 186 STVDRPKLLSQLTSLLAEIGLNIQEAHAFSTTDGYSLDVFVVDGWPSEEIEELKNALEKEILKSKLQEQSYSRKSSV--MTEHVKERVVSLPSCVEIPTDGTDVWEIDARQLKIENRIASGSYADLYRGTYCSQEVAIKVLKPEQITREMLREFS 338
BLAST of g.arboreum_cottongen_reftransV1_0008171 vs. ExPASy TrEMBL
Match: A0A0D2SG68_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_007G190200 PE=4 SV=1) HSP 1 Score: 219.935 bits (559), Expect = 3.234e-65 Identity = 127/155 (81.94%), Postives = 139/155 (89.68%), Query Frame = -3 Query: 2 STVDKPKXXXXXXXXXXXXXLNIQEAHAFSTVDGYSLDVFVVDGWPFEETKELKDALEKEILKSK--EQSCVRKSSISAMTGLVKEEAVSLPNCVEIPTDGTDVWEIDSRQLKIEHKIASGSYGDLYRGTYYSQEVAIKVLKPERVTGELLREFS 460 STVD+PKLLSQLTSLLAE+GLNIQEAHAFST DGYSLDVFVVDGWP EE +ELK+ALEKEILKSK EQS RKSS+ MT VKE VSLP+CVEIPTDGTDVWEID+RQLKIE++IASGSY DLYRGTY SQEVAIKVLKPE++T E+LREFS Sbjct: 186 STVDRPKLLSQLTSLLAEIGLNIQEAHAFSTTDGYSLDVFVVDGWPSEEIEELKNALEKEILKSKLQEQSYSRKSSV--MTEHVKERVVSLPSCVEIPTDGTDVWEIDARQLKIENRIASGSYADLYRGTYCSQEVAIKVLKPEQITREMLREFS 338
BLAST of g.arboreum_cottongen_reftransV1_0008171 vs. ExPASy TrEMBL
Match: A0A0B0MHN9_GOSAR (Serine/threonine-protein kinase HT1 OS=Gossypium arboreum GN=F383_23334 PE=4 SV=1) HSP 1 Score: 216.468 bits (550), Expect = 3.422e-64 Identity = 125/155 (80.65%), Postives = 138/155 (89.03%), Query Frame = -3 Query: 2 STVDKPKXXXXXXXXXXXXXLNIQEAHAFSTVDGYSLDVFVVDGWPFEETKELKDALEKEILKSK--EQSCVRKSSISAMTGLVKEEAVSLPNCVEIPTDGTDVWEIDSRQLKIEHKIASGSYGDLYRGTYYSQEVAIKVLKPERVTGELLREFS 460 STVD+PKLLSQLTSLLAE+GLNIQEAHAFST DGYSLDVFVVDGWP EE +ELK+ALEKEI KSK EQS RKSS+ MT VKE VSLP+CVEIPTDGTD+WEID+RQLKIE++IASGSY DLYRGTY SQEVAIKVLKPE++T E+LREFS Sbjct: 186 STVDRPKLLSQLTSLLAEIGLNIQEAHAFSTTDGYSLDVFVVDGWPSEEIEELKNALEKEISKSKLQEQSYSRKSSV--MTEHVKERVVSLPSCVEIPTDGTDLWEIDARQLKIENRIASGSYADLYRGTYCSQEVAIKVLKPEQITREMLREFS 338
BLAST of g.arboreum_cottongen_reftransV1_0008171 vs. ExPASy TrEMBL
Match: B9N912_POPTR (Kinase family protein OS=Populus trichocarpa GN=POPTR_0007s09290g PE=4 SV=1) HSP 1 Score: 206.838 bits (525), Expect = 3.336e-60 Identity = 117/153 (76.47%), Postives = 135/153 (88.24%), Query Frame = -3 Query: 2 STVDKPKXXXXXXXXXXXXXLNIQEAHAFSTVDGYSLDVFVVDGWPFEETKELKDALEKEILKSKEQSCVRKSSISAMTGLVKEEAVSLPNCVEIPTDGTDVWEIDSRQLKIEHKIASGSYGDLYRGTYYSQEVAIKVLKPERVTGELLREFS 460 STVD+PKLLSQLTSLLAE+GLNIQEAHAFSTVDG+SLDVFVVDGW EET+EL++ALEKEILKSKEQ ++ S+S + K SLP+CVEIP+DGTDVWEID+ LK+E+K+ASGSYGDLYRGTY SQEVAIKVLKPERV+GE+LREFS Sbjct: 197 STVDRPKLLSQLTSLLAEIGLNIQEAHAFSTVDGFSLDVFVVDGWLREETEELRNALEKEILKSKEQCFSKQLSVSLVGEQNKTGVESLPDCVEIPSDGTDVWEIDTSLLKVENKVASGSYGDLYRGTYCSQEVAIKVLKPERVSGEMLREFS 349
BLAST of g.arboreum_cottongen_reftransV1_0008171 vs. ExPASy TrEMBL
Match: V4UGW7_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10025256mg PE=4 SV=1) HSP 1 Score: 204.912 bits (520), Expect = 3.941e-60 Identity = 111/153 (72.55%), Postives = 131/153 (85.62%), Query Frame = -3 Query: 2 STVDKPKXXXXXXXXXXXXXLNIQEAHAFSTVDGYSLDVFVVDGWPFEETKELKDALEKEILKSKEQSCVRKSSISAMTGLVKEEAVSLPNCVEIPTDGTDVWEIDSRQLKIEHKIASGSYGDLYRGTYYSQEVAIKVLKPERVTGELLREFS 460 ST+DKPKLL+QLTSLL E+GLNIQEAHAFSTVDG+SLDVFVVDGWP++ET++LK+ L KEILKSK+QSC ++ + K S PNC+EIPTDGTDVWEID++QLKIE K+ASGSYGDLY+GTY SQEVAIKVLKPERV E+L+EFS Sbjct: 122 STIDKPKLLTQLTSLLGEIGLNIQEAHAFSTVDGFSLDVFVVDGWPYDETEDLKNVLAKEILKSKDQSCSKRQPTLGVPMHSKLLIESSPNCIEIPTDGTDVWEIDAKQLKIECKVASGSYGDLYKGTYCSQEVAIKVLKPERVNTEMLKEFS 274
BLAST of g.arboreum_cottongen_reftransV1_0008171 vs. ExPASy TrEMBL
Match: V4SIA7_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10025256mg PE=4 SV=1) HSP 1 Score: 204.912 bits (520), Expect = 1.618e-59 Identity = 111/153 (72.55%), Postives = 131/153 (85.62%), Query Frame = -3 Query: 2 STVDKPKXXXXXXXXXXXXXLNIQEAHAFSTVDGYSLDVFVVDGWPFEETKELKDALEKEILKSKEQSCVRKSSISAMTGLVKEEAVSLPNCVEIPTDGTDVWEIDSRQLKIEHKIASGSYGDLYRGTYYSQEVAIKVLKPERVTGELLREFS 460 ST+DKPKLL+QLTSLL E+GLNIQEAHAFSTVDG+SLDVFVVDGWP++ET++LK+ L KEILKSK+QSC ++ + K S PNC+EIPTDGTDVWEID++QLKIE K+ASGSYGDLY+GTY SQEVAIKVLKPERV E+L+EFS Sbjct: 185 STIDKPKLLTQLTSLLGEIGLNIQEAHAFSTVDGFSLDVFVVDGWPYDETEDLKNVLAKEILKSKDQSCSKRQPTLGVPMHSKLLIESSPNCIEIPTDGTDVWEIDAKQLKIECKVASGSYGDLYKGTYCSQEVAIKVLKPERVNTEMLKEFS 337 The following BLAST results are available for this feature:
BLAST of g.arboreum_cottongen_reftransV1_0008171 vs. ExPASy TrEMBL
Analysis Date: 2016-11-15 (Homology Analysis for Gossypium arboreum CottonGen RefTrans V1 vs TrEMBL) Total hits: 25
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BLAST of g.arboreum_cottongen_reftransV1_0008171 vs. ExPASy Swiss-Prot
Analysis Date: 2016-11-15 (Homology Analysis for Gossypium arboreum CottonGen RefTrans V1 vs SwissProt) Total hits: 0
InterPro
Analysis Name: InterProScan analysis for Gossypium arboreum CottonGen RefTrans V1
Date Performed: 2016-11-14
Sequences
The
following sequences are available for this feature:
contig sequence >g.arboreum_cottongen_reftransV1_0008171 ID=g.arboreum_cottongen_reftransV1_0008171; Name=g.arboreum_cottongen_reftransV1_0008171; organism=Gossypium arboreum; type=contig; length=462bpback to top Annotated Terms
The
following terms have been associated with
this contig:
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