g.arboreum_cottongen_reftransV1_0005590, g.arboreum_cottongen_reftransV1_0005590 (contig) Gossypium arboreum
Overview
Alignments
The following features are aligned
Analyses
This contig is derived from or has results from the following analyses
Homology
BLAST of g.arboreum_cottongen_reftransV1_0005590 vs. ExPASy TrEMBL
Match: A0A0D2Q9T2_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_006G138200 PE=4 SV=1) HSP 1 Score: 1310.82 bits (3391), Expect = 0.000e+0 Identity = 652/700 (93.14%), Postives = 663/700 (94.71%), Query Frame = 2 Query: 104 MFRPYSYGPRAAWLWIIEYVSSFPQLDISIISGLIETAPILPEDLEENTSERVALRCLEELFGPQNSHGSVAPVSRAVLNPSASCDDVLDHILYHILQKVPLSDLKNAGPELLRWDGHSFIEHKRATLPKCALEQLKDVILLDDPYLDGNENGPPSRSDDSNDENGNQEGNLIPQIKKNEELLGRNPIPSKRSRDELVAGNSKGIVSVNHGSMQCDLHLNAKKSKLVAKPACTIQAVAELPIXXXXXXXXXXXXSQRIMKVTEIGTNNLGKVSQIGEGNRDLCVASRTPGLIDAVGRVELLDNQMENVQNDNTDMMVEQKHGDIICPNVVINESSPVENGAPVKESSGDVGGNIDHDFTSSSQNSISADGLQENVDLNGEKADMDHPCVEQICEDEDEIFNISLKKNLFLSSQHMASQDPVQNADWTEQNSCVKCNQNGRLLVCTSSGCLLAVHESCLNCPARFDDKGHFLCPFCACSVSISNYLEAKNKIILARKKLVAFMGLMGKLIQEQGRSWNHSKLNGNENLAGIQESGHLGREHEHKQEELPAKLKTSDDNPTTENTETFPINQVEVEGDDILKEVVGPQITDASQKLVNSDGEESSTSADDKYIISSHSTRSKKSETRQSFSPTRRLRRKKAPWTNDEEEMLRKGVQELANEDGTVPWKRILEFGTNVFLMDRTATDLKNKWRSMCKDSPGCK 2203 MFRPY+YGPRAAWLWIIEYVSSFPQLDISIISGLIETAPILPEDLEENTSERVALRCLEELFGPQNSHGSV+PVSRAVLNPSASCDDVLDHILYHILQKVPLSDLKNAGPELLRWDGHSFIEHKRATLPKCALEQLKDVILLDDPYLDGNENGPPSRSDDSNDENGNQEGNLIPQIKKNEELLGRNPIPSKRSRDELVAGNSKG+VSVNHGSMQCDLHLNAKKSKLVA P CTIQAVAELPIHLH DDE+LEDESQRIMKVTEI TNNLGKVSQIGEG++DLCVASRTPGL MVEQKHGDIICPNVVI+ESSPVENGAPVKESSGD GGNID DFTSSSQNS SADGLQENVDL GEKADMDHPCVEQICEDEDEIFNISLKKNLFLSSQ MASQDPVQNADWTEQNSCVKCNQNG+LLVCTSSGCLLAVHESCLNCPARFDDKGHFLCPFCACSVSISNYLEAKNKIILARKKLVAFMGLMGKLIQEQGRSWNHSKLNGNENLAGIQESGHLGREHEHKQEELPAKLKTSDDNPTTENTETFPINQVEVEG DILKEVVGPQITDA QKLVNSDGEESSTSADDKYIISSHSTRSKKSETRQSFS TRRLRRKKAPWTNDEEEML+KG+QE+ANEDGTVPWKRILEFGTNVFLMDRTATDLKNKWRSMCK SPGCK Sbjct: 1 MFRPYTYGPRAAWLWIIEYVSSFPQLDISIISGLIETAPILPEDLEENTSERVALRCLEELFGPQNSHGSVSPVSRAVLNPSASCDDVLDHILYHILQKVPLSDLKNAGPELLRWDGHSFIEHKRATLPKCALEQLKDVILLDDPYLDGNENGPPSRSDDSNDENGNQEGNLIPQIKKNEELLGRNPIPSKRSRDELVAGNSKGVVSVNHGSMQCDLHLNAKKSKLVANPTCTIQAVAELPIHLHGDDEQLEDESQRIMKVTEIETNNLGKVSQIGEGDQDLCVASRTPGL------------------------MVEQKHGDIICPNVVIDESSPVENGAPVKESSGDAGGNIDQDFTSSSQNSTSADGLQENVDLIGEKADMDHPCVEQICEDEDEIFNISLKKNLFLSSQRMASQDPVQNADWTEQNSCVKCNQNGQLLVCTSSGCLLAVHESCLNCPARFDDKGHFLCPFCACSVSISNYLEAKNKIILARKKLVAFMGLMGKLIQEQGRSWNHSKLNGNENLAGIQESGHLGREHEHKQEELPAKLKTSDDNPTTENTETFPINQVEVEGHDILKEVVGPQITDARQKLVNSDGEESSTSADDKYIISSHSTRSKKSETRQSFSTTRRLRRKKAPWTNDEEEMLKKGLQEIANEDGTVPWKRILEFGTNVFLMDRTATDLKNKWRSMCKGSPGCK 676
BLAST of g.arboreum_cottongen_reftransV1_0005590 vs. ExPASy TrEMBL
Match: A0A0B0N1I3_GOSAR (PHD finger 21B OS=Gossypium arboreum GN=F383_33544 PE=4 SV=1) HSP 1 Score: 1298.49 bits (3359), Expect = 0.000e+0 Identity = 650/667 (97.45%), Postives = 650/667 (97.45%), Query Frame = 2 Query: 203 LIETAPILPEDLEENTSERVALRCLEELFGPQNSHGSVAPVSRAVLNPSASCDDVLDHILYHILQKVPLSDLKNAGPELLRWDGHSFIEHKRATLPKCALEQLKDVILLDDPYLDGNENGPPSRSDDSNDENGNQEGNLIPQIKKNEELLGRNPIPSKRSRDELVAGNSKGIVSVNHGSMQCDLHLNAKKSKLVAKPACTIQAVAELPIXXXXXXXXXXXXSQRIMKVTEIGTNNLGKVSQIGEGNRDLCVASRTPGLIDAVGRVELLDNQMENVQNDNTDMMVEQKHGDIICPNVVINESSPVENGAPVKESSGDVGGNIDHDFTSSSQNSISADGLQENVDLNGEKADMDHPCVEQICEDEDEIFNISLKKNLFLSSQHMASQDPVQNADWTEQNSCVKCNQNGRLLVCTSSGCLLAVHESCLNCPARFDDKGHFLCPFCACSVSISNYLEAKNKIILARKKLVAFMGLMGKLIQEQGRSWNHSKLNGNENLAGIQESGHLGREHEHKQEELPAKLKTSDDNPTTENTETFPINQVEVEGDDILKEVVGPQITDASQKLVNSDGEESSTSADDKYIISSHSTRSKKSETRQSFSPTRRLRRKKAPWTNDEEEMLRKGVQELANEDGTVPWKRILEFGTNVFLMDRTATDLKNKWRSMCKDSPGCK 2203 LIETAPILPEDLEENTSERVALRCLEELFGPQNSHGSVAPVSRAVLNPSASCDDVLDHILYHILQKVPLSDLKNAGPELLRWDGHSFIEHKRATLPKCALEQLKDVILLDDPYLDGNENGPPSRSDDSNDENGNQEGNLIPQIKKNEELLGRNPIPSKRSRDELVAGNSKGIVSVNHGSMQCDLHLNAKKSKLVAKPACTIQAVAELPIHLHDDDERLEDESQRIMKVTEIGTNNLGKVSQIGEGNRDLCVASRTPGLIDAVGRVELLDNQMENVQNDNTDMMVEQKHGDIICPNVVINESSPVENGAPVKESSGDVGGNIDHDFTSSSQNSISADGLQENVDLNGEKADMDHPCVEQICEDEDEIFNISLKKNLFLSSQHMASQDPVQNADWTEQNSCVKCNQNGRLLVCTSSGCLLAVHESCLNCPARFDDKGHFLCPFCACSVSISNYLEAKNKIILARKKLVAFMGLMGKLIQEQGRSWNHSKLNGNENLAGIQESGHLGREHEHKQEELPAKLKTSDDNPTTENTETFPINQVEVEGDDILKEVVGPQITDASQKLVNSDGEESSTSADDK SFSPTRRLRRKKAPWTNDEEEMLRKGVQELANEDGTVPWKRILEFGTNVFLMDRTATDLKNKWRSMCKDSPGCK Sbjct: 36 LIETAPILPEDLEENTSERVALRCLEELFGPQNSHGSVAPVSRAVLNPSASCDDVLDHILYHILQKVPLSDLKNAGPELLRWDGHSFIEHKRATLPKCALEQLKDVILLDDPYLDGNENGPPSRSDDSNDENGNQEGNLIPQIKKNEELLGRNPIPSKRSRDELVAGNSKGIVSVNHGSMQCDLHLNAKKSKLVAKPACTIQAVAELPIHLHDDDERLEDESQRIMKVTEIGTNNLGKVSQIGEGNRDLCVASRTPGLIDAVGRVELLDNQMENVQNDNTDMMVEQKHGDIICPNVVINESSPVENGAPVKESSGDVGGNIDHDFTSSSQNSISADGLQENVDLNGEKADMDHPCVEQICEDEDEIFNISLKKNLFLSSQHMASQDPVQNADWTEQNSCVKCNQNGRLLVCTSSGCLLAVHESCLNCPARFDDKGHFLCPFCACSVSISNYLEAKNKIILARKKLVAFMGLMGKLIQEQGRSWNHSKLNGNENLAGIQESGHLGREHEHKQEELPAKLKTSDDNPTTENTETFPINQVEVEGDDILKEVVGPQITDASQKLVNSDGEESSTSADDK-----------------SFSPTRRLRRKKAPWTNDEEEMLRKGVQELANEDGTVPWKRILEFGTNVFLMDRTATDLKNKWRSMCKDSPGCK 685 HSP 2 Score: 67.781 bits (164), Expect = 2.153e-8 Identity = 34/42 (80.95%), Postives = 35/42 (83.33%), Query Frame = 3 Query: 66 LKVNQVLALDLVRCFALTLMVQELHGFGSLSTYQAFPS*IFP 191 LKVNQVLALDLVRCFALTLMVQELHGFGSLS + P I P Sbjct: 5 LKVNQVLALDLVRCFALTLMVQELHGFGSLSLIETAP--ILP 44
BLAST of g.arboreum_cottongen_reftransV1_0005590 vs. ExPASy TrEMBL
Match: A0A0D2RW48_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_006G138200 PE=4 SV=1) HSP 1 Score: 1209.9 bits (3129), Expect = 0.000e+0 Identity = 605/650 (93.08%), Postives = 614/650 (94.46%), Query Frame = 2 Query: 104 MFRPYSYGPRAAWLWIIEYVSSFPQLDISIISGLIETAPILPEDLEENTSERVALRCLEELFGPQNSHGSVAPVSRAVLNPSASCDDVLDHILYHILQKVPLSDLKNAGPELLRWDGHSFIEHKRATLPKCALEQLKDVILLDDPYLDGNENGPPSRSDDSNDENGNQEGNLIPQIKKNEELLGRNPIPSKRSRDELVAGNSKGIVSVNHGSMQCDLHLNAKKSKLVAKPACTIQAVAELPIXXXXXXXXXXXXSQRIMKVTEIGTNNLGKVSQIGEGNRDLCVASRTPGLIDAVGRVELLDNQMENVQNDNTDMMVEQKHGDIICPNVVINESSPVENGAPVKESSGDVGGNIDHDFTSSSQNSISADGLQENVDLNGEKADMDHPCVEQICEDEDEIFNISLKKNLFLSSQHMASQDPVQNADWTEQNSCVKCNQNGRLLVCTSSGCLLAVHESCLNCPARFDDKGHFLCPFCACSVSISNYLEAKNKIILARKKLVAFMGLMGKLIQEQGRSWNHSKLNGNENLAGIQESGHLGREHEHKQEELPAKLKTSDDNPTTENTETFPINQVEVEGDDILKEVVGPQITDASQKLVNSDGEESSTSADDKYIISSHSTRSKKSETRQSFSPTRRLRRKKAPWTNDEEEMLR 2053 MFRPY+YGPRAAWLWIIEYVSSFPQLDISIISGLIETAPILPEDLEENTSERVALRCLEELFGPQNSHGSV+PVSRAVLNPSASCDDVLDHILYHILQKVPLSDLKNAGPELLRWDGHSFIEHKRATLPKCALEQLKDVILLDDPYLDGNENGPPSRSDDSNDENGNQEGNLIPQIKKNEELLGRNPIPSKRSRDELVAGNSKG+VSVNHGSMQCDLHLNAKKSKLVA P CTIQAVAELPIHLH DDE+LEDESQRIMKVTEI TNNLGKVSQIGEG++DLCVASRTPGL MVEQKHGDIICPNVVI+ESSPVENGAPVKESSGD GGNID DFTSSSQNS SADGLQENVDL GEKADMDHPCVEQICEDEDEIFNISLKKNLFLSSQ MASQDPVQNADWTEQNSCVKCNQNG+LLVCTSSGCLLAVHESCLNCPARFDDKGHFLCPFCACSVSISNYLEAKNKIILARKKLVAFMGLMGKLIQEQGRSWNHSKLNGNENLAGIQESGHLGREHEHKQEELPAKLKTSDDNPTTENTETFPINQVEVEG DILKEVVGPQITDA QKLVNSDGEESSTSADDKYIISSHSTRSKKSETRQSFS TRRLRRKKAPWTNDEEEML+ Sbjct: 1 MFRPYTYGPRAAWLWIIEYVSSFPQLDISIISGLIETAPILPEDLEENTSERVALRCLEELFGPQNSHGSVSPVSRAVLNPSASCDDVLDHILYHILQKVPLSDLKNAGPELLRWDGHSFIEHKRATLPKCALEQLKDVILLDDPYLDGNENGPPSRSDDSNDENGNQEGNLIPQIKKNEELLGRNPIPSKRSRDELVAGNSKGVVSVNHGSMQCDLHLNAKKSKLVANPTCTIQAVAELPIHLHGDDEQLEDESQRIMKVTEIETNNLGKVSQIGEGDQDLCVASRTPGL------------------------MVEQKHGDIICPNVVIDESSPVENGAPVKESSGDAGGNIDQDFTSSSQNSTSADGLQENVDLIGEKADMDHPCVEQICEDEDEIFNISLKKNLFLSSQRMASQDPVQNADWTEQNSCVKCNQNGQLLVCTSSGCLLAVHESCLNCPARFDDKGHFLCPFCACSVSISNYLEAKNKIILARKKLVAFMGLMGKLIQEQGRSWNHSKLNGNENLAGIQESGHLGREHEHKQEELPAKLKTSDDNPTTENTETFPINQVEVEGHDILKEVVGPQITDARQKLVNSDGEESSTSADDKYIISSHSTRSKKSETRQSFSTTRRLRRKKAPWTNDEEEMLK 626
BLAST of g.arboreum_cottongen_reftransV1_0005590 vs. ExPASy TrEMBL
Match: A0A0D2SXL5_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_006G138200 PE=4 SV=1) HSP 1 Score: 1110.13 bits (2870), Expect = 0.000e+0 Identity = 556/605 (91.90%), Postives = 566/605 (93.55%), Query Frame = 2 Query: 389 ILQKVPLSDLKNAGPELLRWDGHSFIEHKRATLPKCALEQLKDVILLDDPYLDGNENGPPSRSDDSNDENGNQEGNLIPQIKKNEELLGRNPIPSKRSRDELVAGNSKGIVSVNHGSMQCDLHLNAKKSKLVAKPACTIQAVAELPIXXXXXXXXXXXXSQRIMKVTEIGTNNLGKVSQIGEGNRDLCVASRTPGLIDAVGRVELLDNQMENVQNDNTDMMVEQKHGDIICPNVVINESSPVENGAPVKESSGDVGGNIDHDFTSSSQNSISADGLQENVDLNGEKADMDHPCVEQICEDEDEIFNISLKKNLFLSSQHMASQDPVQNADWTEQNSCVKCNQNGRLLVCTSSGCLLAVHESCLNCPARFDDKGHFLCPFCACSVSISNYLEAKNKIILARKKLVAFMGLMGKLIQEQGRSWNHSKLNGNENLAGIQESGHLGREHEHKQEELPAKLKTSDDNPTTENTETFPINQVEVEGDDILKEVVGPQITDASQKLVNSDGEESSTSADDKYIISSHSTRSKKSETRQSFSPTRRLRRKKAPWTNDEEEMLRKGVQELANEDGTVPWKRILEFGTNVFLMDRTATDLKNKWRSMCKDSPGCK 2203 L +VPLSDLKNAGPELLRWDGHSFIEHKRATLPKCALEQLKDVILLDDPYLDGNENGPPSRSDDSNDENGNQEGNLIPQIKKNEELLGRNPIPSKRSRDELVAGNSKG+VSVNHGSMQCDLHLNAKKSKLVA P CTIQAVAELPIHLH DDE+LEDESQRIMKVTEI TNNLGKVSQIGEG++DLCVASRTPGL MVEQKHGDIICPNVVI+ESSPVENGAPVKESSGD GGNID DFTSSSQNS SADGLQENVDL GEKADMDHPCVEQICEDEDEIFNISLKKNLFLSSQ MASQDPVQNADWTEQNSCVKCNQNG+LLVCTSSGCLLAVHESCLNCPARFDDKGHFLCPFCACSVSISNYLEAKNKIILARKKLVAFMGLMGKLIQEQGRSWNHSKLNGNENLAGIQESGHLGREHEHKQEELPAKLKTSDDNPTTENTETFPINQVEVEG DILKEVVGPQITDA QKLVNSDGEESSTSADDKYIISSHSTRSKKSETRQSFS TRRLRRKKAPWTNDEEEML+KG+QE+ANEDGTVPWKRILEFGTNVFLMDRTATDLKNKWRSMCK SPGCK Sbjct: 10 FLYQVPLSDLKNAGPELLRWDGHSFIEHKRATLPKCALEQLKDVILLDDPYLDGNENGPPSRSDDSNDENGNQEGNLIPQIKKNEELLGRNPIPSKRSRDELVAGNSKGVVSVNHGSMQCDLHLNAKKSKLVANPTCTIQAVAELPIHLHGDDEQLEDESQRIMKVTEIETNNLGKVSQIGEGDQDLCVASRTPGL------------------------MVEQKHGDIICPNVVIDESSPVENGAPVKESSGDAGGNIDQDFTSSSQNSTSADGLQENVDLIGEKADMDHPCVEQICEDEDEIFNISLKKNLFLSSQRMASQDPVQNADWTEQNSCVKCNQNGQLLVCTSSGCLLAVHESCLNCPARFDDKGHFLCPFCACSVSISNYLEAKNKIILARKKLVAFMGLMGKLIQEQGRSWNHSKLNGNENLAGIQESGHLGREHEHKQEELPAKLKTSDDNPTTENTETFPINQVEVEGHDILKEVVGPQITDARQKLVNSDGEESSTSADDKYIISSHSTRSKKSETRQSFSTTRRLRRKKAPWTNDEEEMLKKGLQEIANEDGTVPWKRILEFGTNVFLMDRTATDLKNKWRSMCKGSPGCK 590
BLAST of g.arboreum_cottongen_reftransV1_0005590 vs. ExPASy TrEMBL
Match: A0A061EX00_THECC (RING/FYVE/PHD zinc finger superfamily protein, putative isoform 1 OS=Theobroma cacao GN=TCM_024753 PE=4 SV=1) HSP 1 Score: 578.556 bits (1490), Expect = 0.000e+0 Identity = 320/554 (57.76%), Postives = 392/554 (70.76%), Query Frame = 2 Query: 95 LGPMFRPYSYGPRAAWLWIIEYVSSFPQLDISIISGLIETAPILPEDLEENTSERVALRCLEELFGPQNSHGSVAPV-SRAVLNPSASCDDVLDHILYHILQKVPLSDLKNAGPELLRWDGHSFIEHKRATLPKCALEQLKDVILLDDPYLDGNENGPPSRSDDSNDENGNQEGNLIPQIKKNEE------LLGRNPIPSKRSRDELVAGNSKGIVSVNHGSMQCDLHLNAKKSKLVAKPACTIQAVAELPIXXXXXXXXXXXXSQRIMKVTEIGTNNLGKVSQIGEGNRDLCVASRTPGLIDAVGRVELLDNQMENVQNDNTDMMVEQKHGDIICPNVVINESSPVENGAPVKESSGDVGGNIDHDFTSSSQNSISADGLQENVDLNGEKADMDHPCVEQICEDEDEIFNISLKKNLFLSSQHMASQDPVQNADWTEQNSCVKCNQNGRLLVCTSSGCLLAVHESCLNCPARFDDKGHFLCPFCACSVSISNYLEAKNKIILARKKLVAFM-GLMGKLIQEQGRSWNHSKLNGNENLAGIQESGHLGREHEHK 1732 +G M +S GP WLWIIEY+SSF Q+D SII GLIE AP+LP+DL +NT E +ALRCLEELFGP N VAP SR V + +ASC+DVL HI+ Q+V LS+L+ AGPELLRWD H FI HKRA+LPKCALEQLKD IL + P LDG+EN P R DDS+DENGN+EGNLIPQ K++ LL RN IP KR + +LVAGN G+VS N M D +NAKK K A CTIQ+V ++PI LH ++ E S +I+KVTEI NNLGK SQ GEG+ D+ V SRT G DAVG VEL DN+MEN QN D+M EQK+G NV+++ES+ VENGA K GD N D F S NS SA GLQ+N++ + KADM+HPC E++CE DE FNI+L K+LFLSSQ + SQDP+ + WTEQ CVKCN+NG++LVC+SSGC L VHESCL PARFDDKG+F CPFC CSVSI+ YLEAK+K LARK+L AF+ KL ++Q + +H +LN +E+L GIQ +GHLG E +HK Sbjct: 82 IGRMLGMFSSGPSLPWLWIIEYLSSFRQIDTSIIRGLIEAAPVLPDDLGKNTREMIALRCLEELFGPTNGLRDVAPPDSRVVFDLAASCEDVLKHIV----QEVSLSNLRKAGPELLRWDVHPFIMHKRASLPKCALEQLKDSILEETPVLDGDENTPTWRLDDSDDENGNREGNLIPQTHKDDNEVLQDGLLERNLIPIKRCKSDLVAGNLVGLVSCNQDGMHNDFPVNAKKFKQDA--TCTIQSVEKIPIPLHGVEQLDE--SGKIIKVTEIEGNNLGKDSQAGEGDEDVFVVSRTLGQSDAVGHVELQDNEMENAQN--ADIMGEQKYGYRPSKNVMMDESNHVENGALEKSPGGDASENFDQGFPLYSLNSTSAVGLQQNIEPDEAKADMEHPCAEKMCEYVDERFNIALNKSLFLSSQCIPSQDPLGKSGWTEQKFCVKCNKNGQVLVCSSSGCPLVVHESCLGSPARFDDKGNFYCPFCVCSVSITKYLEAKDKTSLARKELDAFLEHCSKKLTEQQWKLQSHLRLNVDEDLVGIQMNGHLG-ESKHK 624 HSP 2 Score: 189.889 bits (481), Expect = 4.303e-47 Identity = 95/163 (58.28%), Postives = 121/163 (74.23%), Query Frame = 2 Query: 1715 REHEHKQEELPAKLKTSDDNPTTENTETFPINQVEVEGDDILKEVVGPQITDASQKLV---NSDGEESSTSADDKYIISSHSTRSKKSETRQSFSPTRRLRRKKAPWTNDEEEMLRKGVQELANEDGTVPWKRILEFGTNVFLMDRTATDLKNKWRSMCKDSP 2194 REHEH+Q++LP K SDDNP ENT+T NQVEV G ++ KE V PQIT+ QK V N DGEES T+A+DK+I+SS+S R +K ET+ +F P +LRRKK PWT +EEEMLR+ V++ A+ GTVPWK+IL+ GT+VFL RT DLK+KWR+MCK P Sbjct: 678 REHEHQQDQLPDNRKYSDDNPAGENTKTILENQVEVGGKNV-KEAVQPQITNPPQKPVCAFNGDGEESPTAANDKFIVSSYSIRLRKRETKCTFPPIPQLRRKKLPWTKNEEEMLRREVEKYASHGGTVPWKKILDMGTSVFLSGRTTVDLKDKWRNMCKGGP 839
BLAST of g.arboreum_cottongen_reftransV1_0005590 vs. ExPASy TrEMBL
Match: A0A061EY27_THECC (RING/FYVE/PHD zinc finger superfamily protein, putative isoform 2 OS=Theobroma cacao GN=TCM_024753 PE=4 SV=1) HSP 1 Score: 578.17 bits (1489), Expect = 0.000e+0 Identity = 320/554 (57.76%), Postives = 392/554 (70.76%), Query Frame = 2 Query: 95 LGPMFRPYSYGPRAAWLWIIEYVSSFPQLDISIISGLIETAPILPEDLEENTSERVALRCLEELFGPQNSHGSVAPV-SRAVLNPSASCDDVLDHILYHILQKVPLSDLKNAGPELLRWDGHSFIEHKRATLPKCALEQLKDVILLDDPYLDGNENGPPSRSDDSNDENGNQEGNLIPQIKKNEE------LLGRNPIPSKRSRDELVAGNSKGIVSVNHGSMQCDLHLNAKKSKLVAKPACTIQAVAELPIXXXXXXXXXXXXSQRIMKVTEIGTNNLGKVSQIGEGNRDLCVASRTPGLIDAVGRVELLDNQMENVQNDNTDMMVEQKHGDIICPNVVINESSPVENGAPVKESSGDVGGNIDHDFTSSSQNSISADGLQENVDLNGEKADMDHPCVEQICEDEDEIFNISLKKNLFLSSQHMASQDPVQNADWTEQNSCVKCNQNGRLLVCTSSGCLLAVHESCLNCPARFDDKGHFLCPFCACSVSISNYLEAKNKIILARKKLVAFM-GLMGKLIQEQGRSWNHSKLNGNENLAGIQESGHLGREHEHK 1732 +G M +S GP WLWIIEY+SSF Q+D SII GLIE AP+LP+DL +NT E +ALRCLEELFGP N VAP SR V + +ASC+DVL HI+ Q+V LS+L+ AGPELLRWD H FI HKRA+LPKCALEQLKD IL + P LDG+EN P R DDS+DENGN+EGNLIPQ K++ LL RN IP KR + +LVAGN G+VS N M D +NAKK K A CTIQ+V ++PI LH ++ E S +I+KVTEI NNLGK SQ GEG+ D+ V SRT G DAVG VEL DN+MEN QN D+M EQK+G NV+++ES+ VENGA K GD N D F S NS SA GLQ+N++ + KADM+HPC E++CE DE FNI+L K+LFLSSQ + SQDP+ + WTEQ CVKCN+NG++LVC+SSGC L VHESCL PARFDDKG+F CPFC CSVSI+ YLEAK+K LARK+L AF+ KL ++Q + +H +LN +E+L GIQ +GHLG E +HK Sbjct: 4 IGRMLGMFSSGPSLPWLWIIEYLSSFRQIDTSIIRGLIEAAPVLPDDLGKNTREMIALRCLEELFGPTNGLRDVAPPDSRVVFDLAASCEDVLKHIV----QEVSLSNLRKAGPELLRWDVHPFIMHKRASLPKCALEQLKDSILEETPVLDGDENTPTWRLDDSDDENGNREGNLIPQTHKDDNEVLQDGLLERNLIPIKRCKSDLVAGNLVGLVSCNQDGMHNDFPVNAKKFKQDA--TCTIQSVEKIPIPLHGVEQLDE--SGKIIKVTEIEGNNLGKDSQAGEGDEDVFVVSRTLGQSDAVGHVELQDNEMENAQN--ADIMGEQKYGYRPSKNVMMDESNHVENGALEKSPGGDASENFDQGFPLYSLNSTSAVGLQQNIEPDEAKADMEHPCAEKMCEYVDERFNIALNKSLFLSSQCIPSQDPLGKSGWTEQKFCVKCNKNGQVLVCSSSGCPLVVHESCLGSPARFDDKGNFYCPFCVCSVSITKYLEAKDKTSLARKELDAFLEHCSKKLTEQQWKLQSHLRLNVDEDLVGIQMNGHLG-ESKHK 546 HSP 2 Score: 189.119 bits (479), Expect = 3.422e-47 Identity = 95/163 (58.28%), Postives = 121/163 (74.23%), Query Frame = 2 Query: 1715 REHEHKQEELPAKLKTSDDNPTTENTETFPINQVEVEGDDILKEVVGPQITDASQKLV---NSDGEESSTSADDKYIISSHSTRSKKSETRQSFSPTRRLRRKKAPWTNDEEEMLRKGVQELANEDGTVPWKRILEFGTNVFLMDRTATDLKNKWRSMCKDSP 2194 REHEH+Q++LP K SDDNP ENT+T NQVEV G ++ KE V PQIT+ QK V N DGEES T+A+DK+I+SS+S R +K ET+ +F P +LRRKK PWT +EEEMLR+ V++ A+ GTVPWK+IL+ GT+VFL RT DLK+KWR+MCK P Sbjct: 600 REHEHQQDQLPDNRKYSDDNPAGENTKTILENQVEVGGKNV-KEAVQPQITNPPQKPVCAFNGDGEESPTAANDKFIVSSYSIRLRKRETKCTFPPIPQLRRKKLPWTKNEEEMLRREVEKYASHGGTVPWKKILDMGTSVFLSGRTTVDLKDKWRNMCKGGP 761
BLAST of g.arboreum_cottongen_reftransV1_0005590 vs. ExPASy TrEMBL
Match: A0A061GYX1_THECC (RING/FYVE/PHD zinc finger superfamily protein, putative OS=Theobroma cacao GN=TCM_042306 PE=4 SV=1) HSP 1 Score: 422.55 bits (1085), Expect = 4.342e-134 Identity = 251/540 (46.48%), Postives = 320/540 (59.26%), Query Frame = 2 Query: 95 LGPMFRPYSYGPRAAWLWIIEYVSSFPQLDISIISGLIETAPILPEDLEENTSERVALRCLEELFGPQNSHGSV-APVSRAVLNPSASCDDVLDHILYHILQKVPLSDLKNAGPELLRWDGHSFIEHKRATLPKCALEQLKDVILLDDPYLDGNENGPPSRSDDSNDENGNQEGNLIPQIKKN------EELLGRNPIPSKRSRDELVAGNSKGIVSVNHGSMQCDLHLNAKKSKLVAKPACTIQAVAELPIXXXXXXXXXXXXSQRIMKVTEIGTNNLGKVSQIGEGNRDLCVASRTPGLIDAVGRVELLDNQMENVQNDNTDMMVEQKHGDIICPNVVINESSPVENGAPVKESSGDVGGNIDHDFTSSSQNSISADGLQENVDLNGEKADMDHPCVEQICEDEDEIFNISLKKNLFLSSQHMASQDPVQNADWTEQNSCVKCNQNGRLLVCTSSGCLLAVHESCLNCPARFDDKGHFLCPFCACSVSISNYLEAKNKIILARKKLVAFMGLMGKLIQEQGRS-WNHSKLNGNENLAG 1690 LG M S G WLWIIEY+SSF ++D SII GLIE AP+LP L NT+E V+LRCLEELFGP+N V P SR V + S SC DVL IL Q+V +SDLK AGP+LLRWD H FI HKRA+ CALEQLKD + D P +DG+E+ P DENG+ EGNL+P N + LL N IPSKR ++ A N G+ S N M L K+ K +C+ Q+V ++PI LH G + K SQ E +RD V SRT G D V V+ DNQ+ N QN M+ E+ +GD N+ + E + E+G+ K SGD N+D F SS SAD Q+ +D + D +HPC EQ+ EDE +++LKK+L LSS+ +SQDP+ ADW EQN C KC ++GR+LVC+S+ C + VHESC PARFDDKG+F CP+CA SVSIS YLEAK K+ LAR++L AFM L K++ E+ R H +LNG+E L G Sbjct: 4 LGSMLGFSSPGSSLPWLWIIEYLSSFSKIDTSIIRGLIEAAPVLPHGLGTNTTEMVSLRCLEELFGPENDFKDVDVPDSRVVFDLSESCKDVLKQIL----QEVSVSDLKKAGPKLLRWDVHPFIMHKRASQRTCALEQLKDSMFKDIPVIDGDEDAP-------KDENGDGEGNLVPHGHGNRNDVLQDGLLEGNLIPSKRYITDVDADNLVGLDSGNPNGMFNHNDLQLKEKKFKQDGSCSNQSVGQIPIPLH-------------------GNEQVQKDSQANEVDRDGRVTSRTVGQSDGVFHVKFQDNQIGNAQN--AGMVGEEMYGDTASQNISMIEPNHFESGSLQKVPSGDSHDNVDQVFPLSSPKPASADVFQQKIDSDEANVDFEHPCTEQLYEDER--LDVALKKSLSLSSRCTSSQDPLGAADWIEQNLCFKCTKSGRVLVCSSNDCPIVVHESCFGTPARFDDKGNFRCPYCAYSVSISQYLEAKGKVTLAREELCAFMELFAKILPEEKRKPHGHPRLNGDEGLVG 509
BLAST of g.arboreum_cottongen_reftransV1_0005590 vs. ExPASy TrEMBL
Match: A5B054_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_016915 PE=4 SV=1) HSP 1 Score: 325.865 bits (834), Expect = 4.186e-95 Identity = 257/783 (32.82%), Postives = 384/783 (49.04%), Query Frame = 2 Query: 140 WLWIIEYVSSFPQLDISIISGLIETAPILPEDLEENTSERVALRCLEELF-GPQNSHGSVAPV--SRAVLNPSASCDDVLDHILYHILQKVPLSDLKNAGPELLRWDGHSFIEHKRATLPKCALEQLKDVIL-----------------------LDDPYLDGNENGPPSRSDDSN--DENGNQEGNLIPQIKKNEELL------GRNPIPSKRSRDELVAGNSKG-----IVSVNHGSMQCDLHLNAKKSKLVAKPACTIQAVAELPIXXXXXXXXXXXXSQRIMKVTEIGTNNLGKV---SQIGEGNRDLCVASRTPGLIDAVGRVELLDNQMENVQNDNT---DMMVEQKHGDI-------------ICPNVVI--------------------------NESSPVENGAPVKESSGDVGGNIDHDFTSSSQNSISADGLQENVDLNGEKADMDHPCVEQICED----EDEIFNISLKKNLFLSSQHMASQDPVQNADWTEQNSCVKCNQNGRLLVCTSSGCLLAVHESCLNCPARFDDKGHFLCPFCACSVSISNYLEAKNKIILARKKLVAFMGLMGK---LIQEQGRSWNHSKLNGNENLAGIQESGHLGREHEHKQEELPAKLKTSDDNPTTENTETFP-INQVEVEGDDILKEVVGPQITDASQKLVNSDGEESSTSAD--DKYIISSHSTRSKKSETRQSFSPTRRLRRKKAPWTNDEEEMLRKGVQELANE-DGTVPWKRILEFGTNVFLMDRTATDLKNKWRSMCKDSPGCK 2203 WLW++E ++SF ++DIS++ L+ AP + ++L N E +ALRCLE LF G N V PV S+ +PS SC+DVL IL +KV S L+ PELL+W+ + FI HKRA LPKCAL++LKD IL P DG+ R D+ + +G+LIP +NE L R +P KR D+L A N G + SVN+G D H NAK+ K A C+I ++ P+ LH + I + + LG + + + E + D V S+ I V E NQ + + N +M ++ H DI + PN I N+SS + + K S + + DH + N + V ++ K D +H C E++ D DE I++++ FLSS+ + D + A WTEQN C+KC ++G+LLVC+SSGC L VHE+CL CP FD+ G+F CPFCA S ++S YLE+K K+ LA+K+L +F+ K + ++ + KLN + NL + E+GH+ + + + A++ D N E + + V + +E + QI+D + S TS D DK S++ R ++ + + +F P +LRRKK WT EEE+L+ GVQ+ +N+ D ++PWK+I+EFG VF RT DLK+KWR++CK SP K Sbjct: 13 WLWVMETLASFERVDISLLKDLMIKAPEVSDNLGRNVKEMIALRCLEALFSGITND---VHPVVHSKMGFDPSESCEDVLQCIL----RKVSASKLRMGEPELLKWNVNPFIAHKRACLPKCALQELKDTILEGSHPSAXSLKERSGLRFESQCETRTPNGDGDSGAVAPRVDEGTACGQVEAAKGDLIPLTAENENNLLPEDTTERILLPYKRGLDDLPAKNLMGQFNPNVDSVNYGG---DSHSNAKRRKHDA--FCSITSIEPNPVSLHGKKLLEDSSRPSINECDLAKESQLGDLEGSTMVSEDDHDKYVVSKRVEQITDVEHGEFEHNQTQIPFHSNKMPQNMPRDESHHDISVDEAKDDDVEHWVEPNKSIGAASDGSQQKTAVDEAKDDGDCRVEPNKSSGSSDESQKKNSVDEAKDDGDHSSQPKASNDKLPNEAHHKVFVDEAKDDTEHCCEEEMLSDSTEYHDEEDGIAMERQNFLSSKCTFNHDSLSIAGWTEQNLCMKCTKDGQLLVCSSSGCPLVVHENCLGCPPSFDNMGNFYCPFCAYSRAVSEYLESKKKVSLAKKELASFINAGMKHEPVKPKKKHRKKNEKLNESANLVKVCENGHVKEKRQTRANHGDAQVT---DQLIRRNVEKHDGVEEQGVANLGVQQEALQQQISDPLEDPA------SGTSGDENDKPSSSTYYIRFRRQQQQYTFPPIHQLRRKKLAWTAKEEEILKVGVQKFSNDHDKSIPWKKIMEFGGTVFQRGRTTIDLKDKWRNICKGSPKSK 774
BLAST of g.arboreum_cottongen_reftransV1_0005590 vs. ExPASy TrEMBL
Match: D7THZ7_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_08s0007g08160 PE=4 SV=1) HSP 1 Score: 325.865 bits (834), Expect = 4.545e-95 Identity = 256/783 (32.69%), Postives = 384/783 (49.04%), Query Frame = 2 Query: 140 WLWIIEYVSSFPQLDISIISGLIETAPILPEDLEENTSERVALRCLEELF-GPQNSHGSVAPV--SRAVLNPSASCDDVLDHILYHILQKVPLSDLKNAGPELLRWDGHSFIEHKRATLPKCALEQLKDVIL-----------------------LDDPYLDGNENGPPSRSDDSN--DENGNQEGNLIPQIKKNEELL------GRNPIPSKRSRDELVAGNSKG-----IVSVNHGSMQCDLHLNAKKSKLVAKPACTIQAVAELPIXXXXXXXXXXXXSQRIMKVTEIGTNNLGKV---SQIGEGNRDLCVASRTPGLIDAVGRVELLDNQMENVQNDNT---DMMVEQKHGDI-------------ICPNVVI--------------------------NESSPVENGAPVKESSGDVGGNIDHDFTSSSQNSISADGLQENVDLNGEKADMDHPCVEQICEDEDEIFN----ISLKKNLFLSSQHMASQDPVQNADWTEQNSCVKCNQNGRLLVCTSSGCLLAVHESCLNCPARFDDKGHFLCPFCACSVSISNYLEAKNKIILARKKLVAFMGLMGK---LIQEQGRSWNHSKLNGNENLAGIQESGHLGREHEHKQEELPAKLKTSDDNPTTENTETFP-INQVEVEGDDILKEVVGPQITDASQKLVNSDGEESSTSAD--DKYIISSHSTRSKKSETRQSFSPTRRLRRKKAPWTNDEEEMLRKGVQELANE-DGTVPWKRILEFGTNVFLMDRTATDLKNKWRSMCKDSPGCK 2203 WLW++E ++SF ++DIS++ L+ AP + ++L N E +ALRCLE LF G N V PV S+ +PS SC+DVL IL +KV S L+ PELL+W+ + FI HKRA LPKCAL++LKD IL P DG+ R D+ + +G+LIP +NE L R +P KR D+L A N G + SVN+G D H NAK+ K A C+I ++ P+ LH + I + + LG + + + E + D V S+ I V E NQ + + N +M ++ H DI + PN I N+SS + + K S + + DH + N + V ++ K D +H C E++ D E + I++++ FLSS+ + D + A WTEQN C+KC ++G+LLVC+SSGC L VHE+CL CP FD+ G+F CPFCA S ++S YLE+K K+ LA+K+L +F+ K + ++ + KLN + NL + E+GH+ + + + A++ D N E + + V + +E + QI+D + S TS D DK S++ R ++ + + +F P +LRRKK WT EEE+L+ GVQ+ +N+ D ++PWK+I+EFG VF RT DLK+KWR++CK SP K Sbjct: 13 WLWVMETLASFERVDISLLKDLMIKAPEVSDNLGRNVKEMIALRCLEALFSGITND---VHPVVHSKMGFDPSESCEDVLQCIL----RKVSASKLRMGEPELLKWNVNPFIAHKRACLPKCALQELKDTILEGSHPSAVSLKERSGLRFESQCETRTPNGDGDSGAVAPRVDEGTACGQVEAAKGDLIPLTAENENNLLPEDTTERILLPYKRGLDDLPAKNLMGQFNPNVDSVNYGG---DSHSNAKRRKHDA--FCSITSIEPNPVSLHGKKLLEDSSRPSINECDLAKESQLGDLEGSTMVSEDDHDKYVVSKRVEQITDVEHGEFEHNQTQIPFHSNKMPQNMPRDESHHDISVDEAKDDDVEHWVEPNKSIGAASDGSQQKTAVDEAKDDGDCRVEPNKSSGSSDESQKKNSVDEAKDDGDHSSQPKASNDKLPNEAHHKVFVDEAKDDTEHCCEEEMLSDSTEYHDEEDGIAMERQNFLSSKCTFNHDSLSIAGWTEQNLCMKCTKDGQLLVCSSSGCPLVVHENCLGCPPSFDNMGNFYCPFCAYSRAVSEYLESKKKVSLAKKELASFINAGMKHEPVKPKKKHRKKNEKLNESANLVKVCENGHVKEKRQTRANHGDAQVT---DQLIRRNVEKHDGVEEQGVANLGVQQEALQQQISDPLEDPA------SGTSGDENDKPSSSTYYIRFRRQQQQYTFPPIHQLRRKKLAWTAKEEEILKVGVQKFSNDHDKSIPWKKIMEFGGTVFQRGRTTIDLKDKWRNICKGSPKSK 774
BLAST of g.arboreum_cottongen_reftransV1_0005590 vs. ExPASy TrEMBL
Match: B9II56_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0016s05370g PE=4 SV=1) HSP 1 Score: 301.212 bits (770), Expect = 1.620e-85 Identity = 259/829 (31.24%), Postives = 399/829 (48.13%), Query Frame = 2 Query: 104 MFRPYSYGPRAAWLWIIEYVSSFPQLDISIISGLIETAPILPEDLEENTSERVALRCLEELFGPQNSHGSVAPVS----RAVLNPSASCDDVLDHILYHILQKVPLSDLKNAGPELLRWDGHSFIEHKRATL-----------------PKCALEQLKDVILLDDP----YLDGNENGPPSRSDDSNDENGN---QEGNLIPQIKKNEELL-----GRNPIPSKRSRDELVAGNSKGIVSVNHGSMQC--DLHLNAKKSKLVAKPACTIQAVAELPIXXXXXXXXXXXXSQRIMKVTEIGTNNLGKVSQIG--EGNRDLCVASRTPGLIDAVGRVELLDNQMENVQND---NTDMMVEQKHGDIICPNVVINESSPVE----NGAPVKESSGDV-----GGNIDHDFTSSSQNSISADGLQENVDLNGEKADMDH----PCVEQICEDEDEIFNISLKKNLFLSSQHMASQDPVQNADWTEQNSCVKCNQNGRLLVCTSSGCLLAVHESCLNCPARFDDKGHFLCPFCACSVSISNYLEAKNKIILARKKLVAFMGLMGKLIQEQGRSWNH-----SKLNGN----------------ENLAGIQES-----GHLGREHEHK----------QEELPAKLKTS----DDNPTTENTETFPINQVEVEGDDILKE--------------------------------VVGPQITDASQK----LVNSDGEESSTSADDKYIISSHSTRSKKSETRQSFSPTRRLRRKKAPWTNDEEEMLRKGVQELANEDGTVPWKRILEFGTNVFLMDRTATDLKNKWRSMCKDSPGCK 2203 M P S AWLW+IEY++SF Q++ SI+ LIE AP +P+DL +NT E VALRCLE+LF ++ +G V+ + + S SC+DVL IL Q+ +SDL GPELL+WD H FI HKRA + P +L++ +++ +D D ++G P +D +G E + IP + +NE ++ RN + +R R +G++ ++ +H C HL + + ++ ++ + +ED + +++ +E +L K S G EG+ + ID G DN ++ Q++ N + M GD + ++E + E N AP +S + G DH NS+S++G N D + +A DH + E E E ++ L+K+ FLSSQ+M S D + A+WT+QN C+KC ++G+LLVC + C L +HE+CL FD++G F CPFCA S++IS YLEAK K ARK+L F+ +++ RS H SK +G+ ENL G + G + ++H+ E L + + + ++ P N T I+ VE EG+++++E V G Q TD ++ ++SDG E+S DDK I +++ R +K E RQ + RRKK PWT EEE+L++GVQ+ A+ DG PWK ILE+G++VF RT DLK+KWR+MCK SP K Sbjct: 18 MDDPSSSATTLAWLWVIEYLASFRQIEPSILHELIEAAPEIPDDLGKNTREMVALRCLEDLFC-RSDNGIANDVTSKELKVTFDLSESCEDVLQSIL----QETSVSDLNRGGPELLKWDIHPFIMHKRACMPKCALEKVKDAILEGIHPYASLKEYSELVNANDRGNRITTDYGDDGAPVGRIGGSDTDGQINPPEESSIPLLHENENVVEDNSYNRNLLHFERER----SGSASQNLAGDHEDQGCVDGDHLQPQAKRFKEDALHDNLSMGQISSTPPQHKDMVEDSFEMVVEDSENRDFHLEKESSQGGLEGSIPVENDHDEDVGIDRHGHSLDADNAFQHNQHEIAHNANKMPLS--GDGLHQYSFVDEINRAEPRKSNAAPSVGTSDRLFVNGNKGKSDHSGQQKPSNSVSSNGFHRNTDADEREAGTDHLSEEDESNESDEYEQERVDVGLRKSHFLSSQYMLSHDSLAEANWTDQNLCIKCCKDGQLLVCGAGSCSLVIHENCLVFSPHFDERGDFYCPFCAYSLAISEYLEAKKKAYSARKELKLFIE-----TRQEYRSNKHTQRLLSKRHGSSRQNEDKDLLNKFLDYENLVGEKRKQSNNRGQISEGNDHQFQKGKGKKKQVEPLASCIGVNSLCREEEPDV-NVRTNHISTVEKEGEEVVQENSSGTELDINQHQVSVDPKYSVDNHLCKEKEIVSGSQRTDGRRQKAVCAISSDGGETSGDEDDKSISTNYFIRFRKRE-RQYTPAMPQSRRKKVPWTAHEEEILKEGVQKFAS-DGKYPWKDILEYGSSVFSNGRTTIDLKDKWRNMCKLSPKSK 827 The following BLAST results are available for this feature:
BLAST of g.arboreum_cottongen_reftransV1_0005590 vs. ExPASy TrEMBL
Analysis Date: 2016-11-15 (Homology Analysis for Gossypium arboreum CottonGen RefTrans V1 vs TrEMBL) Total hits: 25
Pagesback to top
BLAST of g.arboreum_cottongen_reftransV1_0005590 vs. ExPASy Swiss-Prot
Analysis Date: 2016-11-15 (Homology Analysis for Gossypium arboreum CottonGen RefTrans V1 vs SwissProt) Total hits: 0
InterPro
Analysis Name: InterProScan analysis for Gossypium arboreum CottonGen RefTrans V1
Date Performed: 2016-11-14
Sequences
The
following sequences are available for this feature:
contig sequence >g.arboreum_cottongen_reftransV1_0005590 ID=g.arboreum_cottongen_reftransV1_0005590; Name=g.arboreum_cottongen_reftransV1_0005590; organism=Gossypium arboreum; type=contig; length=2426bpback to top Annotated Terms
The
following terms have been associated with
this contig:
|