g.arboreum_cottongen_reftransV1_0015984, g.arboreum_cottongen_reftransV1_0015984 (contig) Gossypium arboreum

Overview
Nameg.arboreum_cottongen_reftransV1_0015984
Unique Nameg.arboreum_cottongen_reftransV1_0015984
Typecontig
OrganismGossypium arboreum (Tree cotton)
Sequence length908
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Chr3chromosomeg.arboreum_cottongen_reftransV1_0015984:1..908 .
Chr3:9252835..9255295 -
Homology
BLAST of g.arboreum_cottongen_reftransV1_0015984 vs. ExPASy TrEMBL
Match: A0A072VN13_MEDTR (Transcription factor bZIP88 OS=Medicago truncatula GN=MTR_1g080920 PE=4 SV=1)

HSP 1 Score: 341.658 bits (875), Expect = 1.097e-111
Identity = 190/311 (61.09%), Postives = 232/311 (74.60%), Query Frame = 3
Query:    3 FLKNKLNLACAAVAMSRASFVKPQDSAVRADSGSQASDTPQSGSIATSKGAG----------DKDGNAQSGFPSVVNGQKKIGAQVRPSTSGSSREMSEDDEVEGENETMENMDPADAKRVRRMLXXXXXXXXXXXXKQAHLTELETQVSQLRVENATLLKRLTDISQKYNESAVDNRVLKADVETLRAKVKMAEDSVKRITGLSPVFHASPEISTAGMSSFDGSPSDTSTEAAVSVQDGPKHPLYQAAANKPISTHDLRTNNALADISSVENIQPKSEVSSVSGNKIGRT-PSMQRVASLEHLQKRICGG 902
            FLK+KLNLACAAVAM+R S  K QD A   ++G Q+S+  Q GS   S+G+G          DKD       PS+ + QKK    +RPSTSGSSRE S+DDE EGE   +++ DP D KRVRRMLSNRESARRSRRRKQAHLTELETQVSQLR EN+TL+KRLTD++QKY +SAVDNRVLKADVETLRAKVKMAE++VKR+TGL+P+FH  P++S+  M +FDGSPSD   +AAV VQD P H  YQ  +  P+  HD+R +N L +ISS+EN+QP +  + V GNK+G+T P + RVASLEHLQKRI GG
Sbjct:   92 FLKSKLNLACAAVAMTRGSLTKSQDLATFPENGPQSSNATQVGSQPISEGSGPSGNDPPILQDKDAKVPPAVPSIPHVQKKTIVAIRPSTSGSSREQSDDDEAEGETYMIDSTDPTDVKRVRRMLSNRESARRSRRRKQAHLTELETQVSQLRGENSTLVKRLTDVNQKYTDSAVDNRVLKADVETLRAKVKMAEETVKRVTGLNPLFHVMPDMSS--MPAFDGSPSDNLADAAVPVQDDPHHHFYQPTSINPMPCHDMRVSNGLGEISSIENVQPNN-AAVVGGNKMGQTAPPLHRVASLEHLQKRIRGG 399          
BLAST of g.arboreum_cottongen_reftransV1_0015984 vs. ExPASy TrEMBL
Match: A0A0B2PBF0_GLYSO (Light-inducible protein CPRF2 OS=Glycine soja GN=glysoja_013839 PE=4 SV=1)

HSP 1 Score: 340.887 bits (873), Expect = 2.536e-111
Identity = 194/311 (62.38%), Postives = 232/311 (74.60%), Query Frame = 3
Query:    3 FLKNKLNLACAAVAMSRASFVKPQDSAVRADSGSQASDTPQSGSIATSKGA----------GDKDGNAQSGFPSVVNGQKKIGAQVRPSTSGSSREMSEDDEVEGENETMENMDPADAKRVRRMLXXXXXXXXXXXXKQAHLTELETQVSQLRVENATLLKRLTDISQKYNESAVDNRVLKADVETLRAKVKMAEDSVKRITGLSPVFHASPEISTAGMSSFDG-SPSDTSTEAAVSVQDGPKHPLYQAAANKPISTHDLRTNNALADISSVENIQPKSEVSSVSGNKIGRTPSMQRVASLEHLQKRICGG 902
            FLK+KLNLACAAVAM+R S  K QD +  ++ GSQ ++     S  TSKG+           DKD N   G PS+   QKK    +RPSTSGSSRE S+D+++EGE    +N DPAD KRVRRMLSNRESARRSRRRKQAHLT+LETQVSQLR EN+TLLKRLTD+SQKY++SAVDNRVLKADVETLR KVKMAE++VKRITGL+P+ HA  +IS+ G+ SFDG SPSDTS +AAV VQD P H  YQ  +  PI +HD   NN L  ISS+EN+Q  + V  + GNK+G+T S+QRVASLEHLQ+RI GG
Sbjct:  101 FLKSKLNLACAAVAMTRGSLAKSQDPSPFSEGGSQPTNPSLVESQTTSKGSIPSENDPSKLQDKDTNVPVGIPSIPAMQKKPAVAIRPSTSGSSREQSDDEDIEGETSMNDNTDPADVKRVRRMLSNRESARRSRRRKQAHLTDLETQVSQLRGENSTLLKRLTDVSQKYSDSAVDNRVLKADVETLRTKVKMAEETVKRITGLNPLLHAMSDISSLGLPSFDGRSPSDTSADAAVPVQDDPHHHFYQPTSTNPIPSHDPIVNNGLGGISSIENVQQNAAV-VLGGNKMGQTASLQRVASLEHLQERIRGG 410          
BLAST of g.arboreum_cottongen_reftransV1_0015984 vs. ExPASy TrEMBL
Match: A0A0D2S5L8_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_004G246700 PE=4 SV=1)

HSP 1 Score: 330.872 bits (847), Expect = 7.468e-109
Identity = 179/186 (96.24%), Postives = 181/186 (97.31%), Query Frame = 3
Query:    3 FLKNKLNLACAAVAMSRASFVKPQDSAVRADSGSQASDTPQSGSIATSKGAGDKDGNAQSGFPSVVNGQKKIGAQVRPSTSGSSREMSEDDEVEGENETMENMDPADAKRVRRMLXXXXXXXXXXXXKQAHLTELETQVSQLRVENATLLKRLTDISQKYNESAVDNRVLKADVETLRAKVKMAED 560
            FLKNKLNLACAAVAMSRASFVKPQDSAVRADSGSQASDTPQS SIATSKGAGDK+GNA SGFPSVVNGQKKIGAQVRPSTSGSSREMSEDDEVEGENETMENMDPADAKRVRRMLSNRESARRSRRRKQAHLTELETQVSQLRVENATLLKRLTDISQKYNESAVDNRVLKADVETLRAKV  + D
Sbjct:  102 FLKNKLNLACAAVAMSRASFVKPQDSAVRADSGSQASDTPQSVSIATSKGAGDKNGNALSGFPSVVNGQKKIGAQVRPSTSGSSREMSEDDEVEGENETMENMDPADAKRVRRMLSNRESARRSRRRKQAHLTELETQVSQLRVENATLLKRLTDISQKYNESAVDNRVLKADVETLRAKVNESFD 287          
BLAST of g.arboreum_cottongen_reftransV1_0015984 vs. ExPASy TrEMBL
Match: L7Y8B6_CAMSI (BZIP transcription factor family protein 6 OS=Camellia sinensis PE=2 SV=1)

HSP 1 Score: 333.569 bits (854), Expect = 3.875e-108
Identity = 202/310 (65.16%), Postives = 231/310 (74.52%), Query Frame = 3
Query:    3 FLKNKLNLACAAVAMSRASFVKPQDSAVRADSGSQASDTPQSGSIATSKGAG-------DKDGNAQSGFPSVVNGQKKIGAQVRPSTSGSSREMSEDDEVEGENETMENMDPADAKRVRRMLXXXXXXXXXXXXKQAHLTELETQVSQLRVENATLLKRLTDISQKYNESAVDNRVLKADVETLRAKVKMAEDSVKRITGLSPVFHASPEISTAGMSSFDGSPSDTSTEAAVSVQDGP-KHPLYQAAANKPISTHDLRTNNALADISSVENIQPKSEVSSVSGNKIGRTPSMQRVASLEHLQKRICGGIS 908
            FLK++LNLACAAVA++RASFVK Q+S + AD+GSQAS T Q G  A  +G+G       DKD     G PS+   +KK   QV+ +TSGSSRE S+DDE EGE ET  N DP DAKRVRRMLSNRESARRSRRRKQAHLTELETQVSQLRVEN++LLKRL+DISQKYNESAVDNRVLKADVETLRAKVKMAE++VKR+TGL+P+F A  ++ST  M SF  SPSDTS +AAV VQD P +   YQ+AAN   + H  R  N   DI S EN Q         GNK+GRT SMQRVASLEHLQKRI G  S
Sbjct:  135 FLKSRLNLACAAVALTRASFVKSQESPIVADNGSQASSTGQLGMQALGEGSGYGLPKGQDKDVIGPLGIPSLPAMEKKSVVQVKSTTSGSSREQSDDDEAEGETET-NNTDPTDAKRVRRMLSNRESARRSRRRKQAHLTELETQVSQLRVENSSLLKRLSDISQKYNESAVDNRVLKADVETLRAKVKMAEETVKRVTGLNPLFQAMSDMSTMSMPSFADSPSDTSADAAVPVQDVPNQQHFYQSAAN---NNHMSRIENDFVDIPSAENEQ------QSPGNKMGRTASMQRVASLEHLQKRIRGDAS 434          
BLAST of g.arboreum_cottongen_reftransV1_0015984 vs. ExPASy TrEMBL
Match: I1NIQ1_SOYBN (Uncharacterized protein OS=Glycine max PE=4 SV=1)

HSP 1 Score: 330.487 bits (846), Expect = 1.780e-107
Identity = 189/304 (62.17%), Postives = 226/304 (74.34%), Query Frame = 3
Query:    3 FLKNKLNLACAAVAMSRASFVKPQDSAVRADSGSQASDTPQSGSIATSKGA----------GDKDGNAQSGFPSVVNGQKKIGAQVRPSTSGSSREMSEDDEVEGENETMENMDPADAKRVRRMLXXXXXXXXXXXXKQAHLTELETQVSQLRVENATLLKRLTDISQKYNESAVDNRVLKADVETLRAKVKMAEDSVKRITGLSPVFHASPEISTAGMSSFDG-SPSDTSTEAAVSVQDGPKHPLYQAAANKPISTHDLRTNNALADISSVENIQPKSEVSSVSGNKIGRTPSMQRVASLEHL 881
            FLK+KLNLACAAVAM+R S  K QD +  ++ GSQ ++     S  TSKG+           DKD N   G PS+   QKK    +RPSTSGSSRE S+D+++EGE    +N DPAD KRVRRMLSNRESARRSRRRKQAHLT+LETQVSQLR EN+TLLKRLTD+SQKY++SAVDNRVLKADVETLR KVKMAE++VKRITGL+P+ HA  +IS+ G+ SFDG SPSDTS +AAV VQD P H  YQ  +  PI +HD   NN L  ISS+EN+Q  + V  + GNK+G+T S+QRVASLEHL
Sbjct:  101 FLKSKLNLACAAVAMTRGSLAKSQDPSPFSEGGSQPTNPSLVESQTTSKGSIPSENDPSKLQDKDTNVPVGIPSIPAMQKKPAVAIRPSTSGSSREQSDDEDIEGETSMNDNTDPADVKRVRRMLSNRESARRSRRRKQAHLTDLETQVSQLRGENSTLLKRLTDVSQKYSDSAVDNRVLKADVETLRTKVKMAEETVKRITGLNPLLHAMSDISSLGLPSFDGRSPSDTSADAAVPVQDDPHHHFYQPTSTNPIPSHDPIVNNGLGGISSIENVQQNAAV-VLGGNKMGQTASLQRVASLEHL 403          
BLAST of g.arboreum_cottongen_reftransV1_0015984 vs. ExPASy Swiss-Prot
Match: CPRF2_PETCR (Light-inducible protein CPRF2 OS=Petroselinum crispum GN=CPRF2 PE=2 SV=2)

HSP 1 Score: 308.916 bits (790), Expect = 4.374e-101
Identity = 191/311 (61.41%), Postives = 233/311 (74.92%), Query Frame = 3
Query:    3 FLKNKLNLACAAVAMSRASFVKPQDSAVRADSGSQASDTPQSGSIATSKGAG-------DKDGNAQSGFPSVVNGQKKIGAQVRPSTSGSSREMSEDD-EVEGENETMENMDPADAKRVRRMLXXXXXXXXXXXXKQAHLTELETQVSQLRVENATLLKRLTDISQKYNESAVDNRVLKADVETLRAKVKMAEDSVKRITGLSPVFHA-SPEISTAGMSSFDGSPSDTSTEAAVSVQDGPKHPLYQAAANKPISTHDLRTNNALADISSVENIQPKSEVSSVSGNKIGRTPSMQRVASLEHLQKRICGGIS 908
            +LK++L+LACAAVA++RAS +KPQDSA   D+GSQAS+T Q  S    KG+G       DK+  A +  P +   QKK   QV+ +TSGSSR+ S+DD E+EGE ET  N DP+DAKRVRRMLSNRESARRSRRRKQAH+TELETQVSQLRVEN++LLKRLTDISQ+YN++AVDNRVLKAD+ET+RAKVKMAE++VKR+TGL+P+F + S EIST GM SF GSPSDTS +   + QDG K   YQ A    +   D +  N L  +  V+N+Q  S    V GNK+ RT SMQRVASLEHLQKRI GG+S
Sbjct:   84 YLKSRLDLACAAVALTRASSLKPQDSAALLDNGSQASNTSQLVSQVPPKGSGHDLSKEEDKEALAATATPLLPALQKKSAIQVKSTTSGSSRDHSDDDDELEGETETTRNGDPSDAKRVRRMLSNRESARRSRRRKQAHMTELETQVSQLRVENSSLLKRLTDISQRYNDAAVDNRVLKADIETMRAKVKMAEETVKRVTGLNPMFQSMSSEISTIGMQSFSGSPSDTSAD---TTQDGSKQHFYQPAPTSHMPAQDQKIQNGLLQVPPVDNLQQHSASGPVEGNKMERTSSMQRVASLEHLQKRIRGGVS 391          
BLAST of g.arboreum_cottongen_reftransV1_0015984 vs. ExPASy Swiss-Prot
Match: BZP63_ARATH (Basic leucine zipper 63 OS=Arabidopsis thaliana GN=BZIP63 PE=1 SV=1)

HSP 1 Score: 204.912 bits (520), Expect = 1.068e-61
Identity = 142/298 (47.65%), Postives = 192/298 (64.43%), Query Frame = 3
Query:    3 FLKNKLNLACAAVAMSRASFVKPQDSAVRADSGSQASDTPQSGSIATSKGAGDKDGNAQSGFPSVVNGQKKIGAQVRPSTSGSSREMSEDDEVEGENETMENMDPADAKRVRRMLXXXXXXXXXXXXKQAHLTELETQVSQLRVENATLLKRLTDISQKYNESAVDNRVLKADVETLRAKVKMAEDSVKRITGLSPVFHASPEI-STAGMSSFDGSPSDTSTEAAVSVQDGPKHPLYQAAANKPISTHDLRTNNALADISSVENIQPKSEVSSVSGNKIGRTPSMQRVASLEHLQKRI 893
            FLK+KLNLACAAVAM R +F+KPQD++ R+D+G   ++  +  S+A+SK        A     S +             TSGS  E+S D+E E + ET  NM+P + KRV+RMLSNRESARRSRRRKQAHL+ELETQVSQLRVEN+ L+K LTD++Q +N+++V+NRVLKA++ETLRAKVKMAE++VKR+TG +P+FH  P+I ST  +      PS+TS                    N P +T         + +++ E I   ++  ++ G K+ RT SM+RV SLEHLQKRI
Sbjct:   73 FLKSKLNLACAAVAMKRGTFIKPQDTSGRSDNG--GANESEQASLASSK--------ATPMMSSAI-------------TSGS--ELSGDEE-EADGET--NMNPTNVKRVKRMLSNRESARRSRRRKQAHLSELETQVSQLRVENSKLMKGLTDVTQTFNDASVENRVLKANIETLRAKVKMAEETVKRLTGFNPMFHNMPQIVSTVSL------PSETS--------------------NSPDTTS--------SQVTTPEIISSGNKGKALIGCKMNRTASMRRVESLEHLQKRI 308          
BLAST of g.arboreum_cottongen_reftransV1_0015984 vs. ExPASy Swiss-Prot
Match: BZP25_ARATH (Basic leucine zipper 25 OS=Arabidopsis thaliana GN=BZIP25 PE=1 SV=1)

HSP 1 Score: 136.732 bits (343), Expect = 2.885e-35
Identity = 107/223 (47.98%), Postives = 145/223 (65.02%), Query Frame = 3
Query:    3 FLKNKLNLACAAVAMSRASFVKPQDSAVRADSGSQASDTPQSGSIA--TSKGAGDKDGNAQSGFPSVVNGQKKIGAQVRPSTSGSSREMSEDDEVEGENETMENMDPADAKRVRRMLXXXXXXXXXXXXKQAHLTELETQVSQLRVENATLLKRLTDISQKYNESAVDNRVLKADVETLRAKVKMAEDSVKRITGLSPVFHASPEISTAGMSSFDGSPSDTST 665
             LK+KL LACAAVA  R   VKP+DS+  A +  QA      GSI   TS GA      +   F    + QKK     R  TS SSR+ S+DD+++G+ +  +   P D KR RRMLSNRESARRSRRRKQ  + E +TQV QLR E++TL+ RL+D++ KY+ +AVDNR+L+AD+ETLR KVKMAE++VKR+TG++P+  + P +       F  +PS +S+
Sbjct:  137 ILKSKLELACAAVA-RRVGTVKPEDSSASASNQKQAQ-----GSIVAQTSPGA------SSVRFSPTTSTQKKPDVPAR-QTSISSRDDSDDDDLDGDADNGD---PTDVKRARRMLSNRESARRSRRRKQEQMNEFDTQVGQLRAEHSTLINRLSDMNHKYDAAAVDNRILRADIETLRTKVKMAEETVKRVTGVNPLHWSRPNMGIP----FSNTPSASSS 339          
BLAST of g.arboreum_cottongen_reftransV1_0015984 vs. ExPASy Swiss-Prot
Match: BZP10_ARATH (Basic leucine zipper 10 OS=Arabidopsis thaliana GN=BZIP10 PE=1 SV=2)

HSP 1 Score: 135.191 bits (339), Expect = 9.698e-35
Identity = 98/197 (49.75%), Postives = 134/197 (68.02%), Query Frame = 3
Query:    6 LKNKLNLACAAVAMSRASFVKPQDSAVRADSGSQASDTPQSGSIATSKGAGDKDGNAQSGFPSVVNGQKKIGAQVRPSTSGSSREMSEDDEVEGENETMENMDPADAKRVRRMLXXXXXXXXXXXXKQAHLTELETQVSQLRVENATLLKRLTDISQKYNESAVDNRVLKADVETLRAKVKMAEDSVKRITGLSPVF 596
            LKNKL   CA V   R   VKP+DS    ++  Q    P   S  T    G       S  P+ V   KK G  ++  TSGSSRE S+D++++ ENET  ++ P D K+ RRMLSNRESARRSRRRKQ   ++LETQV+ L+ E+++LLK+L++++ KY+E+AV NR+LKAD+ETLRAKVKMAE++VKR+TG++P+ 
Sbjct:  122 LKNKLETECATVVSLRVGSVKPEDSTSSPETQLQ----PVQSSPLTQGELG-----VTSSLPAEV---KKTGVSMKQVTSGSSREYSDDEDLDEENETTGSLKPEDVKKSRRMLSNRESARRSRRRKQEQTSDLETQVNDLKGEHSSLLKQLSNMNHKYDEAAVGNRILKADIETLRAKVKMAEETVKRVTGMNPML 306          
BLAST of g.arboreum_cottongen_reftransV1_0015984 vs. ExPASy Swiss-Prot
Match: OP2_MAIZE (Regulatory protein opaque-2 OS=Zea mays GN=O2 PE=1 SV=1)

HSP 1 Score: 100.908 bits (250), Expect = 1.139e-22
Identity = 90/192 (46.88%), Postives = 118/192 (61.46%), Query Frame = 3
Query:    3 FLKNKLNLACAAVAMSRASFVKPQDSAVRADSGSQASDTPQSGSIATSKGAGDKDGNAQSGFPSVVNGQKKIGAQVRPSTSGSSREMSEDDE-VEGENETMENMDPADAKRVRRMLXXXXXXXXXXXXKQAHLTELETQVSQLRVENATLLKRLTDISQKYNESAVDNRVLKADVETLRAKVKMAEDSVKRI 575
             L+ KL     A  M RA       S V +D  SQ S+    GS   +    +K  N +   P   N  +  G  VR +TS SSR+ S  DE ++GE E +    P + +RVR+  SNRESARRSR RK AHL ELE QV+QL+ EN+ LL+R+  ++QKYN++ VDNRVL+AD+ETLRAKVKM EDS+KR+
Sbjct:  126 ILRRKLEEDLEAFKMWRAD-----SSVVTSDQRSQGSNNHTGGSSIRNNPVQNKLMNGED--PINNNHAQTAGLGVRLATSSSSRDPSPSDEDMDGEVEILGFKMPTE-ERVRKKESNRESARRSRYRKAAHLKELEDQVAQLKAENSCLLRRIAALNQKYNDANVDNRVLRADMETLRAKVKMGEDSLKRV 309          
BLAST of g.arboreum_cottongen_reftransV1_0015984 vs. ExPASy Swiss-Prot
Match: BZIP9_ARATH (Basic leucine zipper 9 OS=Arabidopsis thaliana GN=BZIP9 PE=1 SV=1)

HSP 1 Score: 98.9821 bits (245), Expect = 1.380e-22
Identity = 74/149 (49.66%), Postives = 96/149 (64.43%), Query Frame = 3
Query:  228 VRPSTSGSSREMSEDDEVEGE--NETMENMDPADAKRVRRMLXXXXXXXXXXXXKQAHLTELETQVSQLRVENATLLKRLTDISQKYNESAVDNRVLKADVETLRAKVKMAEDSVKR-----------ITGLSPVFHASPEISTAGMSS 635
            VR +TSGSS   S+D++ E E     M N DP D KR+RRM SNRESA+RSRRRKQ +L +LETQV  L+ +N+TL K+L D +Q++  +  +NRVLK+DVETLR KVK+AED V R            T LSP  H+   +   G +S
Sbjct:   88 VRRTTSGSSHVNSDDEDAETEAGQSEMTN-DPNDLKRIRRMNSNRESAKRSRRRKQEYLVDLETQVDSLKGDNSTLYKQLIDATQQFRSAGTNNRVLKSDVETLRVKVKLAEDLVARGSLTSSLNQLLQTHLSPPSHSISSLHYTGNTS 235          
The following BLAST results are available for this feature:
BLAST of g.arboreum_cottongen_reftransV1_0015984 vs. ExPASy TrEMBL
Analysis Date: 2016-11-15 (Homology Analysis for Gossypium arboreum CottonGen RefTrans V1 vs TrEMBL)
Total hits: 25
Match NameE-valueIdentityDescription
A0A072VN13_MEDTR1.097e-11161.09Transcription factor bZIP88 OS=Medicago truncatula... [more]
A0A0B2PBF0_GLYSO2.536e-11162.38Light-inducible protein CPRF2 OS=Glycine soja GN=g... [more]
A0A0D2S5L8_GOSRA7.468e-10996.24Uncharacterized protein OS=Gossypium raimondii GN=... [more]
L7Y8B6_CAMSI3.875e-10865.16BZIP transcription factor family protein 6 OS=Came... [more]
I1NIQ1_SOYBN1.780e-10762.17Uncharacterized protein OS=Glycine max PE=4 SV=1[more]

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BLAST of g.arboreum_cottongen_reftransV1_0015984 vs. ExPASy Swiss-Prot
Analysis Date: 2016-11-15 (Homology Analysis for Gossypium arboreum CottonGen RefTrans V1 vs SwissProt)
Total hits: 6
Match NameE-valueIdentityDescription
CPRF2_PETCR4.374e-10161.41Light-inducible protein CPRF2 OS=Petroselinum cris... [more]
BZP63_ARATH1.068e-6147.65Basic leucine zipper 63 OS=Arabidopsis thaliana GN... [more]
BZP25_ARATH2.885e-3547.98Basic leucine zipper 25 OS=Arabidopsis thaliana GN... [more]
BZP10_ARATH9.698e-3549.75Basic leucine zipper 10 OS=Arabidopsis thaliana GN... [more]
OP2_MAIZE1.139e-2246.88Regulatory protein opaque-2 OS=Zea mays GN=O2 PE=1... [more]
BZIP9_ARATH1.380e-2249.66Basic leucine zipper 9 OS=Arabidopsis thaliana GN=... [more]
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InterPro
Analysis Name: InterProScan analysis for Gossypium arboreum CottonGen RefTrans V1
Date Performed: 2016-11-14
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 160..180
NoneNo IPR availableCOILSCoilCoilcoord: 111..145
NoneNo IPR availableGENE3D1.20.5.170coord: 102..154
e-value: 7.9E-13
score: 47.8
NoneNo IPR availablePANTHERPTHR22952CAMP-RESPONSE ELEMENT BINDING PROTEIN-RELATEDcoord: 4..224
NoneNo IPR availablePANTHERPTHR22952:SF90BASIC LEUCINE ZIPPER 63coord: 4..224
NoneNo IPR availableSIGNALP_GRAM_POSITIVESignalP-TMSignalP-TMcoord: 1..23
score: 0.465
NoneNo IPR availableSUPERFAMILY57959Leucine zipper domaincoord: 102..152
IPR004827Basic-leucine zipper domainSMARTSM00338brlzneucoord: 98..162
e-value: 9.0E-19
score: 78.4
IPR004827Basic-leucine zipper domainPFAMPF00170bZIP_1coord: 101..154
e-value: 5.3E-14
score: 51.9
IPR004827Basic-leucine zipper domainPROSITEPS00036BZIP_BASICcoord: 105..120
IPR004827Basic-leucine zipper domainPROSITEPS50217BZIPcoord: 100..155
score: 11.588
IPR020983Basic leucine-zipper, C-terminalPFAMPF12498bZIP_Ccoord: 169..294
e-value: 1.3E-39
score: 135.8

Sequences
The following sequences are available for this feature:

contig sequence

>g.arboreum_cottongen_reftransV1_0015984 ID=g.arboreum_cottongen_reftransV1_0015984; Name=g.arboreum_cottongen_reftransV1_0015984; organism=Gossypium arboreum; type=contig; length=908bp
CTTTTCTTAAGAACAAGCTTAACTTGGCTTGTGCTGCTGTTGCCATGTCA
AGGGCATCTTTTGTAAAACCGCAAGATTCGGCTGTTAGAGCTGACAGCGG
ATCACAGGCATCCGATACTCCCCAATCGGGATCCATAGCTACTTCTAAAG
GGGCTGGTGATAAGGACGGTAATGCACAGTCGGGATTTCCTTCAGTGGTT
AATGGACAAAAGAAGATTGGAGCTCAGGTGAGGCCAAGCACAAGTGGATC
ATCAAGAGAGATGTCGGAAGATGATGAAGTAGAAGGAGAGAACGAAACAA
TGGAGAACATGGATCCAGCTGATGCAAAACGTGTAAGGAGGATGCTTTCC
AATAGAGAGTCCGCTAGGCGCTCTAGAAGAAGAAAGCAGGCTCATTTGAC
GGAACTCGAGACACAGGTTTCTCAACTAAGAGTCGAAAATGCAACCTTAT
TGAAGCGTCTTACTGACATTAGCCAAAAGTACAATGAATCAGCGGTCGAC
AATAGAGTTCTGAAAGCTGATGTTGAAACATTGAGAGCAAAGGTGAAAAT
GGCTGAAGATTCCGTCAAAAGAATAACCGGTTTGAGCCCTGTGTTCCATG
CCTCACCCGAAATATCGACAGCGGGGATGTCATCATTCGATGGAAGTCCC
TCCGATACATCTACCGAAGCTGCTGTTTCCGTACAAGACGGCCCAAAGCA
TCCCTTATATCAGGCTGCTGCAAACAAACCTATATCTACTCATGACCTGA
GAACCAATAACGCGCTTGCGGATATATCTTCAGTCGAAAACATACAACCG
AAGTCAGAAGTATCATCAGTATCAGGAAACAAAATCGGTCGGACACCTTC
TATGCAGCGAGTGGCTAGCTTGGAGCATCTGCAAAAGCGGATATGCGGGG
GCATAAGC
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Annotated Terms
The following terms have been associated with this contig:
Vocabulary: INTERPRO
TermDefinition
IPR004827bZIP
IPR020983Basic_leucine-zipper_C
Vocabulary: Molecular Function
TermDefinition
GO:0003700DNA-binding transcription factor activity
GO:0043565sequence-specific DNA binding
Vocabulary: Biological Process
TermDefinition
GO:0006355regulation of DNA-templated transcription