g.arboreum_cottongen_reftransV1_0010582, g.arboreum_cottongen_reftransV1_0010582 (contig) Gossypium arboreum
Overview
Alignments
The following features are aligned
Analyses
This contig is derived from or has results from the following analyses
Homology
BLAST of g.arboreum_cottongen_reftransV1_0010582 vs. ExPASy TrEMBL
Match: R0GUZ4_9BRAS (Uncharacterized protein OS=Capsella rubella GN=CARUB_v10004238mg PE=4 SV=1) HSP 1 Score: 610.912 bits (1574), Expect = 0.000e+0 Identity = 281/424 (66.27%), Postives = 349/424 (82.31%), Query Frame = -2 Query: 106 RLIFDQMVEKDLVSWSAMISGYAESDQPQEALRLFKELQILGIRPDQVTMLSVISACANLGVLDKAKWIHVYADKNGFGGSLRINNALIDMYAKCGSLERARNVFEKMTSRNVISWTGMINAFAIHGDANNALRYFQKMKEARVEPNGVTFVGVLYACSHAGLVEDGRKIFASMINEHNITPKHEHYGCMVDLLGRANLLREAVEIVETMPFAPNVVIWGSLMSACQIHGETELGEFTAKRVLELEPDHDGALVLLSNIYAKERKWQNVGDLRQLMKERGISKERGYSRIELNNEVHEFLVADRNHKQAYEIYEKLNEVVSRLKLDGYAPNTGCVLVDLEEEEKREVVLWHSEKLALCYGLIN-----GAKDSCIRIVKNLRVCEDCHTFLKLVSKVYRREIIVRDRTRFHHYRDGVCSCRDYW 1362 R+IFDQ +KDLV W+ MIS YAE+D PQEALR+F E++ GI+PD +TM SVISACANLG L AKW+H Y +G L INNALI+MYAKCG L ARNVFE M +RNV+SW+ MINA+++HG+A++AL F +MK+ PN +TFVGVLY CSH+GLVE+G+KIFASM +E+NITP EHYGCMVDL RAN L+EA+EI+E+MP APNVVIWGSLMSAC++HGE +LGE AK +L+LEPDHDGALVL+SNIYA+E++W +V ++R +MKE+ + KE+G SRI+LN + HEFL+ D+ HKQ+ +IY KL+EVVS+LKL GY P++G VLVD+EEEEK ++VLWHSEKLALC+GL+N G+ + IRIVKNLRVCEDCHTF KLVSKVY REIIVRDRTRFHHY+DG+CSCRDYW Sbjct: 301 RVIFDQTEKKDLVCWTTMISAYAENDHPQEALRVFDEMRYSGIKPDLITMFSVISACANLGTLGNAKWVHHYTHISGLESVLPINNALINMYAKCGGLNEARNVFENMPTRNVVSWSSMINAYSMHGEASDALISFARMKQENAVPNAITFVGVLYGCSHSGLVEEGKKIFASMTDEYNITPTLEHYGCMVDLFCRANRLQEALEIIESMPMAPNVVIWGSLMSACRVHGELKLGESAAKHILKLEPDHDGALVLMSNIYAREQRWDDVRNIRCVMKEKNVFKEKGLSRIDLNGKSHEFLIGDKRHKQSDKIYAKLDEVVSKLKLAGYVPHSGSVLVDVEEEEKNDLVLWHSEKLALCFGLMNKEEEKGSCGTVIRIVKNLRVCEDCHTFFKLVSKVYEREIIVRDRTRFHHYKDGLCSCRDYW 724 HSP 2 Score: 123.635 bits (309), Expect = 7.774e-27 Identity = 70/265 (26.42%), Postives = 132/265 (49.81%), Query Frame = -2 Query: 667 RLIFDQMVEKDLVSWSAMISGYAESDQPQEALRLFKELQILGIRPDQVTMLSVISACANLGVLDKAKWIHVYADKNGFGGSLRINNALIDMYAKCGSLERARNVFEKMTSRN-------------------------------VISWTGMINAFAIHGDANNALRYFQKMKEARVEPNGVTFVGVLYACSHAGLVEDGRKI--FASMINEHNITPKHEHYGCMVDLLGRANLLREAVEIVETMPFAPNVVIWGSLMSACQIHGET 1362 R +FD+M ++D+V+W+ MI Y EA +LF+E++ + PD++ + +++SAC G + + I+ + +N + AL+ MYA G ++ AR FEKM+ RN ++ WT MI+A+A + ALR F +M+ + ++P+ +T V+ AC++ G + + + + + + ++ P + ++++ + L EA + E MP NVV W S+++A +HGE Sbjct: 169 RNVFDEMSQRDVVTWNTMIDRYCRCGLLDEAFKLFEEMKFSNVMPDEMILCNIVSACGRTGNMSYNRAIYDFLIENDVSMDTHLLTALVTMYAGSGCMDMAREFFEKMSVRNLFVSTAMVSGYSKAGRLNEARVIFDQTEKKDLVCWTTMISAYAENDHPQEALRVFDEMRYSGIKPDLITMFSVISACANLGTLGNAKWVHHYTHISGLESVLPIN---NALINMYAKCGGLNEARNVFENMP-TRNVVSWSSMINAYSMHGEA 429 HSP 3 Score: 92.4337 bits (228), Expect = 1.020e-16 Identity = 55/231 (23.81%), Postives = 109/231 (47.19%), Query Frame = -2 Query: 634 VSWSAMISGYAESDQPQEALRLFKELQILGIRPDQVTMLSVISACANLGVLDKAKWIHVYADKNGFGGSLRINNALIDMYAKCGSLERARNVFEKMTSRNVISWTGMINAFAIHGDANNALRYFQKMKEARVEPNGVTFVGVLYACSHAGLVEDGRKIFASMINEHNITPKHEHYGCMVDLLGRANLLREAVEIVETMPFAPNVVIWGSLMSACQIHGETELGEFTAKRVL 1326 V ++ + + S++P+ + ++ ++ G R DQ + ++ A + + IH A K + L+DMYA CG +E ARNVF++M+ R+V++W MI+ + G + A + F++MK + V P+ + ++ AC G + R I+ +I E++++ +V + + + A E E M + +S + G ++ G RV+ Sbjct: 80 VVFNPFLRDLSRSNEPRATILFYQRIRHAGGRLDQFSFPPILKAACKVSAFFEGMEIHGVAFKMATLSDPFVQTGLMDMYASCGRIECARNVFDEMSQRDVVTWNTMIDRYCRCGLLDEAFKLFEEMKFSNVMPDEMILCNIVSACGRTGNMSYNRAIYDFLI-ENDVSMDTHLLTALVTMYAGSGCMDMAREFFEKMS------VRNLFVSTAMVSGYSKAGRLNEARVI 303
BLAST of g.arboreum_cottongen_reftransV1_0010582 vs. ExPASy TrEMBL
Match: S8CJR2_9LAMI (Uncharacterized protein OS=Genlisea aurea GN=M569_09864 PE=4 SV=1) HSP 1 Score: 579.326 bits (1492), Expect = 0.000e+0 Identity = 274/420 (65.24%), Postives = 337/420 (80.24%), Query Frame = -2 Query: 106 RLIFDQMVEKDLVSWSAMISGYAESDQPQEALRLFKELQILGIRPDQVTMLSVISACANLGVLDKAKWIHVYADKNGFGGSLRINNALIDMYAKCGSLERARNVFEKMTSRNVISWTGMINAFAIHGDANNALRYFQKMKEARVEPNGVTFVGVLYACSHAGLVEDGRKIFASMINEHNITPKHEHYGCMVDLLGRANLLREAVEIVETMPFAPNVVIWGSLMSACQIHGETELGEFTAKRVLELEPDHDGALVLLSNIYAKERKWQNVGDLRQLMKERGISKERGYSRIELNNEVHEFLVADRNHKQAYEIYEKLNEVVSRLKLDGYAPNTGCVLVDLEEEEKREVVLWHSEKLALCYGLINGAKDSCIRIVKNLRVCEDCHTFLKLVSKVYRREIIVRDRTRFHHY-RDGVCSCRDYW 1362 RL+FD+MV+KDLV WSAMIS YAESD PQEAL++F ++Q GI+PDQVTMLSVISACA+LG L +AK IH + FG +L INNALIDMYAKCGSL A VF +M +NVISW+ MINAFA+HGDA NAL++F MK VEPN +TFVGVLYACSHAGLV +G+K F SM+ E+ ITPK EHYGC+VDL GRAN +R+A++IVETMP APNVVIWGSLM AC IHGE +LG + AK+VLEL+P HDGA + LSN YAKER W++VG LR LM++RGI KERG S IE+ + +HEFL DR H++A EIY KL +VV ++K GY+PNTG VL+D++E+EK VV+ HSEKLALCYGLI ++ CIRI+KNLR+CEDCH F+KL S V++REI++RDR+RFH + DG CSC D+W Sbjct: 309 RLVFDEMVDKDLVCWSAMISCYAESDHPQEALKIFDQMQQNGIKPDQVTMLSVISACAHLGALHRAKQIHETVVRKEFGRALPINNALIDMYAKCGSLHDASEVFIRMHHKNVISWSSMINAFAVHGDAANALKHFTLMKLENVEPNWITFVGVLYACSHAGLVVEGQKAFESMVEEYRITPKLEHYGCLVDLYGRANHIRKALQIVETMPMAPNVVIWGSLMGACWIHGEFDLGVYAAKQVLELDPSHDGAHIFLSNAYAKERWWESVGGLRGLMRQRGIVKERGCSAIEVGDRIHEFLTGDRRHERADEIYAKLYQVVEKVKQVGYSPNTGGVLIDVDEDEKEAVVIGHSEKLALCYGLIEKGEEGCIRIIKNLRICEDCHKFVKLASGVFKREIVIRDRSRFHRFGGDGSCSCGDFW 728 HSP 2 Score: 127.102 bits (318), Expect = 4.469e-28 Identity = 76/283 (26.86%), Postives = 142/283 (50.18%), Query Frame = -2 Query: 619 RLIFDQMVEKDLVSWSAMISGYAESDQPQEALRLFKELQILGIRPDQVTMLSVISACANLGVLDKAKWIHVYADKNGFGGSLRINNALIDMYAKCGSLERARNVFEKMTSRNVISWTGMINAFAIHGD-------------------------------ANNALRYFQKMKEARVEPNGVTFVGVLYACSHAGLVEDGRKIFASMINEH--NITPKHEHYGCMVDLLGRANLLREAVEIVETMPFAPNVVIWGSLMSACQIHGET--ELGEFTAKRVLELEPD 1362 R +FD M KD+V+W+ MI GY +S +AL L +E++ G+ PD+ +++S CA LD K +H ++G ++ AL++MYA G+++ A+ +++KM +NV++ T MI + HGD AL+ F +M++ ++P+ VT + V+ AC+H G + ++I +++ + P + ++D+ + L +A E+ M NV+ W S+++A +HG+ L FT ++ +EP+ Sbjct: 178 RFLFDAMSHKDIVAWNIMIDGYCQSQLFDDALALLEEMKS-GVEPDERIFTTILSGCARFKKLDIGKSVHELISRSGTVLDSQLQTALVNMYANSGAMDLAQTLYDKMKIKNVVASTVMITGHSRHGDIGAARLVFDEMVDKDLVCWSAMISCYAESDHPQEALKIFDQMQQNGIKPDQVTMLSVISACAHLGALHRAKQIHETVVRKEFGRALPINN---ALIDMYAKCGSLHDASEVFIRM-HHKNVISWSSMINAFAVHGDAANALKHFTLMKLENVEPN 455 HSP 3 Score: 70.4774 bits (171), Expect = 1.190e-9 Identity = 59/271 (21.77%), Postives = 119/271 (43.91%), Query Frame = -2 Query: 508 MISGYAESDQPQEALRLFKELQILGIRPDQVTMLSVISACANLGVLDKAKWIHVYADKNGFGGSLRINNALIDMYAKCGSLERARNVFEKMTSRNVISWTGMINAFAIHGDANNALRYFQKMKEARVEPNGVTFVGVLYACSHAGLVEDGRKIFASMINEHNITPKHEHYGCMVDLLGRANLLREAVEIVETMPFAPNVVIWGSLMSACQIHGETELGEFTAKRVLELEPDHDGALVLLSNI---YAKERKWQNVGDLRQLMKERGISKER 1311 +I+ + S + A+ F+ + D+ + +I + LD+ + H A K G+ + AL+ MY CG + AR +F+ M+ +++++W MI+ + ++AL ++MK VEP+ F +L C+ ++ G+ + +I+ + +V++ + + A + + M NVV S I G + G+ A R++ + D LV S + YA+ Q + M++ GI ++ Sbjct: 94 IINHLSRSSDNRNAILFFQAMLRKDFPIDRFSFPPMIKTASKARALDEGRMFHALAAKLGYDSDPFVETALMGMYGACGLISDARFLFDAMSHKDIVAWNIMIDGYCQSQLFDDALALLEEMKSG-VEPDERIFTTILSGCARFKKLDIGKSVH-ELISRSGTVLDSQLQTALVNMYANSGAMDLAQTLYDKMKI-KNVV-----ASTVMITGHSRHGDIGAARLV-FDEMVDKDLVCWSAMISCYAESDHPQEALKIFDQMQQNGIKPDQ 355
BLAST of g.arboreum_cottongen_reftransV1_0010582 vs. ExPASy TrEMBL
Match: M0UAN8_MUSAM (Uncharacterized protein OS=Musa acuminata subsp. malaccensis PE=4 SV=1) HSP 1 Score: 519.235 bits (1336), Expect = 1.557e-178 Identity = 243/419 (58.00%), Postives = 305/419 (72.79%), Query Frame = -2 Query: 106 RLIFDQMVEKDLVSWSAMISGYAESDQPQEALRLFKELQILGIRPDQVTMLSVISACANLGVLDKAKWIHVYADKNGFGGSLRINNALIDMYAKCGSLERARNVFEKMTSRNVISWTGMINAFAIHGDANNALRYFQKMKEARVEPNGVTFVGVLYACSHAGLVEDGRKIFASMINEHNITPKHEHYGCMVDLLGRANLLREAVEIVETMPFAPNVVIWGSLMSACQIHGETELGEFTAKRVLELEPDHDGALVLLSNIYAKERKWQNVGDLRQLMKERGISKERGYSRIELNNEVHEFLVADRNHKQAYEIYEKLNEVVSRLKLDGYAPNTGCVLVDLEEEEKREVVLWHSEKLALCYGLINGAKDSCIRIVKNLRVCEDCHTFLKLVSKVYRREIIVRDRTRFHHYRDGVCSCRDYW 1362 R IFDQM +KDLV WSAMISGYAESDQP EAL+LF E+ +LG++PDQ+TMLSVISACAN+G D+AKW+H++ DKNGF L I NALIDMY+KCGSL AR +F++ ++VI+WT MI FA+HG+ +AL F M V+PNGVTF+ +LYACSHAGLV++GR+IF SMI ++ + PKHEHYGCMVDLLGRA LL+EA+E +E+MPFAPNVV+WGSL+ AC+IHG+ +LGE A+R+LEL+P+HDGA VLLSNIYAK +W++V ++R LMK +G H ++ EIY K L+EEEKRE +L HSEKLAL GLI+ K S I I KNLRVC+DCHTF+KL SKV+ REI++RDRTRFHHY+DGVCSC D+W Sbjct: 66 RFIFDQMTDKDLVCWSAMISGYAESDQPNEALKLFNEMHLLGVKPDQITMLSVISACANMGARDQAKWVHIFVDKNGFHQILSIRNALIDMYSKCGSLVDARTIFDETAFKDVITWTSMITGFAMHGNGRSALAVFDHMISEGVKPNGVTFISLLYACSHAGLVDEGRRIFESMIQDYRLEPKHEHYGCMVDLLGRARLLQEALEFIESMPFAPNVVVWGSLLGACRIHGDVKLGELVARRLLELDPNHDGAYVLLSNIYAKASRWEDVREVRNLMKNKGC------------------------HPRSSEIYGK-----------------------LDEEEKREAILLHSEKLALSLGLIDSKKGSSIHIAKNLRVCDDCHTFMKLASKVFEREIVLRDRTRFHHYKDGVCSCGDFW 437
BLAST of g.arboreum_cottongen_reftransV1_0010582 vs. ExPASy TrEMBL
Match: M0TTX8_MUSAM (Uncharacterized protein OS=Musa acuminata subsp. malaccensis PE=4 SV=1) HSP 1 Score: 517.309 bits (1331), Expect = 9.596e-178 Identity = 242/419 (57.76%), Postives = 304/419 (72.55%), Query Frame = -2 Query: 106 RLIFDQMVEKDLVSWSAMISGYAESDQPQEALRLFKELQILGIRPDQVTMLSVISACANLGVLDKAKWIHVYADKNGFGGSLRINNALIDMYAKCGSLERARNVFEKMTSRNVISWTGMINAFAIHGDANNALRYFQKMKEARVEPNGVTFVGVLYACSHAGLVEDGRKIFASMINEHNITPKHEHYGCMVDLLGRANLLREAVEIVETMPFAPNVVIWGSLMSACQIHGETELGEFTAKRVLELEPDHDGALVLLSNIYAKERKWQNVGDLRQLMKERGISKERGYSRIELNNEVHEFLVADRNHKQAYEIYEKLNEVVSRLKLDGYAPNTGCVLVDLEEEEKREVVLWHSEKLALCYGLINGAKDSCIRIVKNLRVCEDCHTFLKLVSKVYRREIIVRDRTRFHHYRDGVCSCRDYW 1362 R IFDQM +KDLV WSAMISGYAESDQP EAL+LF E+ +LG++PDQ+TMLSVISACAN+G D+AKW+H++ DKNGF L I NALIDMY+KCGSL AR +F++ ++VI+WT MI FA+HG+ +AL F M V+PNGVTF+ +LYACSHAGLV++GR+IF SMI ++ + PKHEHYGCMVDLLGRA LL+EA+E +E+MPFAPNVV+WGSL+ AC+IHG+ +LGE A+R+LEL+P+HDGA VLLSNIYAK +W++V ++R LMK +G H ++ EIY K L+EEEKRE +L HSEKLAL GLI+ K S I I KN+RVC DCHTF+KL SKV+ REI++RDRTRFHHY+DGVCSC D+W Sbjct: 66 RFIFDQMTDKDLVCWSAMISGYAESDQPNEALKLFNEMHLLGVKPDQITMLSVISACANMGARDQAKWVHIFVDKNGFHQILSIRNALIDMYSKCGSLVDARTIFDETAFKDVITWTSMITGFAMHGNGRSALAVFDHMISEGVKPNGVTFISLLYACSHAGLVDEGRRIFESMIQDYRLEPKHEHYGCMVDLLGRARLLQEALEFIESMPFAPNVVVWGSLLGACRIHGDVKLGELVARRLLELDPNHDGAYVLLSNIYAKASRWEDVREVRNLMKNKGC------------------------HPRSNEIYGK-----------------------LDEEEKREAILLHSEKLALSLGLIDSKKGSSIHIAKNIRVCNDCHTFMKLASKVFEREIVLRDRTRFHHYKDGVCSCGDFW 437
BLAST of g.arboreum_cottongen_reftransV1_0010582 vs. ExPASy TrEMBL
Match: A0A078I121_BRANA (BnaC01g22730D protein OS=Brassica napus GN=BnaC01g22730D PE=4 SV=1) HSP 1 Score: 481.871 bits (1239), Expect = 4.774e-161 Identity = 222/339 (65.49%), Postives = 276/339 (81.42%), Query Frame = -2 Query: 346 RLIFDQMVEKDLVSWSAMISGYAESDQPQEALRLFKELQILGIRPDQVTMLSVISACANLGVLDKAKWIHVYADKNGFGGSLRINNALIDMYAKCGSLERARNVFEKMTSRNVISWTGMINAFAIHGDANNALRYFQKMKEARVEPNGVTFVGVLYACSHAGLVEDGRKIFASMINEHNITPKHEHYGCMVDLLGRANLLREAVEIVETMPFAPNVVIWGSLMSACQIHGETELGEFTAKRVLELEPDHDGALVLLSNIYAKERKWQNVGDLRQLMKERGISKERGYSRIELNNEVHEFLVADRNHKQAYEIYEKLNEVVSRLKLDGYAPNTGCVLVDL 1362 R IFD+M +KDLV W+ MIS YAESD P+EALR+F E++ G PD++ M SV+SACA+LGVL+KAKW+H Y +NGF SL +NNALI+MYAKCGSL+ AR VFE+M ++NV+SW+ MINAF++HG+AN+AL F +MK+ VEPN VTFVGVLY CSH+GLVE+G KI ASM +E+NITPK EHYGCMVDL GRAN L EA+E++E+MP APNV IWGSLMSAC++HGE ELGEF AKRVLELEPDHDGALVL+SNIYA+E +W +V +R+ M+E+ + KE+G SRI+LN E HEFL+ D+ HKQ+ EI KL EVVS LKL G P+ G VLVD+ Sbjct: 295 RDIFDRMEKKDLVCWTTMISAYAESDHPEEALRVFDEMRRYGTEPDEIAMGSVVSACASLGVLEKAKWVHEYTHRNGFESSLTVNNALINMYAKCGSLDAARGVFEEMPTKNVVSWSSMINAFSMHGEANDALALFARMKQENVEPNDVTFVGVLYGCSHSGLVEEGNKILASMTDEYNITPKLEHYGCMVDLFGRANRLPEALEVIESMPMAPNVFIWGSLMSACRVHGELELGEFAAKRVLELEPDHDGALVLMSNIYAREERWDDVRKVRRGMEEKNVFKEKGVSRIDLNGESHEFLIGDKRHKQSDEISAKLKEVVSELKLAGCIPDYGSVLVDV 633 HSP 2 Score: 115.546 bits (288), Expect = 2.350e-24 Identity = 75/289 (25.95%), Postives = 137/289 (47.40%), Query Frame = -2 Query: 619 RLIFDQMVEKDLVSWSAMISGYAESDQPQEALRLFKELQILGIRPDQVTMLSVISACANLGVLDKAKWIHVYADKNG--------------FGG-----------------SLRINNALIDMYAKCGSLERARNVFEKMTSRNVISWTGMINAFAIHGDANNALRYFQKMKEARVEPNGVTFVGVLYACSHAGLVEDG--------RKIFASMINEHNITPKHEHYGCMVDLLGRANLLREAVEIVETMPFAPNVVIWGSLMSACQIHGETE--LGEFTAKRVLELEPD 1362 R +FD+M ++D+V+W+ MI Y +EA +LF+E++ + PD++ + +++SACA G I+ + +N + G SL ++ A++ +AK L+ AR++F++M ++++ WT MI+A+A ALR F +M+ EP+ + V+ AC+ G++E R F S + +N ++++ + L A + E MP NVV W S+++A +HGE L F + +EP+ Sbjct: 163 RKVFDEMPQRDVVTWNTMIERYCRCGFLEEAFKLFEEMKCSNVMPDEMILCNIVSACARSGNTRYNSPIYEFLKENDVRMDAHLLTALVTMYAGAGCMDIAREFYMKMSVRSLFVSTAMVSGFAKARRLDDARDIFDRMEKKDLVCWTTMISAYAESDHPEEALRVFDEMRRYGTEPDEIAMGSVVSACASLGVLEKAKWVHEYTHRNGFESSLTVNN---------ALINMYAKCGSLDAARGVFEEMP-TKNVVSWSSMINAFSMHGEANDALALFARMKQENVEPN 441 HSP 3 Score: 85.5001 bits (210), Expect = 1.567e-14 Identity = 65/258 (25.19%), Postives = 113/258 (43.80%), Query Frame = -2 Query: 619 AESDQPQEALRLFKELQILGIRPDQVTMLSVISACANLGVLDKAKWIHVYADKNGFGGSLRINNALIDMYAKCGSLERARNVFEKMTSRNVISWTGMINAFAIHGDANNALRYFQKMKEARVEPNGVTFVGVLYACSHAGLVEDGRKIFASM------INEHNITPKHEHY---GC---------------------MVDLLGRANLLREAVEIVETMPFAPNVVIWGSLMSAC--QIHGETELGEFTAKRVLELEPD 1296 + SD+P+ + ++ ++ G R DQ + ++ A A + L + +H A K + A++DMYA CG + AR VF++M R+V++W MI + G A + F++MK + V P+ + ++ AC+ +G I+ + ++ H +T Y GC MV +A L +A +I + M ++V W +++SA H E L F R EPD Sbjct: 84 SRSDEPRATILFYQRIRHAGGRLDQFSFTPILKAAAKVSALFEGTELHGLALKLATLSDPFVKTAVMDMYACCGKIVEARKVFDEMPQRDVVTWNTMIERYCRCGFLEEAFKLFEEMKCSNVMPDEMILCNIVSACARSGNTRYNSPIYEFLKENDVRMDAHLLTALVTMYAGAGCMDIAREFYMKMSVRSLFVSTAMVSGFAKARRLDDARDIFDRME-KKDLVCWTTMISAYAESDHPEEALRVFDEMRRYGTEPD 340
BLAST of g.arboreum_cottongen_reftransV1_0010582 vs. ExPASy Swiss-Prot
Match: PP311_ARATH (Pentatricopeptide repeat-containing protein At4g14820 OS=Arabidopsis thaliana GN=PCMP-H3 PE=2 SV=1) HSP 1 Score: 620.157 bits (1598), Expect = 0.000e+0 Identity = 289/425 (68.00%), Postives = 355/425 (83.53%), Query Frame = -2 Query: 106 RLIFDQMVEKDLVSWSAMISGYAESDQPQEALRLFKELQILGIRPDQVTMLSVISACANLGVLDKAKWIHVYADKNGFGGSLRINNALIDMYAKCGSLERARNVFEKMTSRNVISWTGMINAFAIHGDANNALRYFQKMKEARVEPNGVTFVGVLYACSHAGLVEDGRKIFASMINEHNITPKHEHYGCMVDLLGRANLLREAVEIVETMPFAPNVVIWGSLMSACQIHGETELGEFTAKRVLELEPDHDGALVLLSNIYAKERKWQNVGDLRQLMKERGISKERGYSRIELNNEVHEFLVADRNHKQAYEIYEKLNEVVSRLKLDGYAPNTGCVLVDLEEEEKREVVLWHSEKLALCYGLIN----GAKDSC--IRIVKNLRVCEDCHTFLKLVSKVYRREIIVRDRTRFHHYRDGVCSCRDYW 1362 ++IFDQ +KDLV W+ MIS Y ESD PQEALR+F+E+ GI+PD V+M SVISACANLG+LDKAKW+H NG L INNALI+MYAKCG L+ R+VFEKM RNV+SW+ MINA ++HG+A++AL F +MK+ VEPN VTFVGVLY CSH+GLVE+G+KIFASM +E+NITPK EHYGCMVDL GRANLLREA+E++E+MP A NVVIWGSLMSAC+IHGE ELG+F AKR+LELEPDHDGALVL+SNIYA+E++W++V ++R++M+E+ + KE+G SRI+ N + HEFL+ D+ HKQ+ EIY KL+EVVS+LKL GY P+ G VLVD+EEEEK+++VLWHSEKLALC+GL+N KDSC IRIVKNLRVCEDCH F KLVSKVY REIIVRDRTRFH Y++G+CSCRDYW Sbjct: 298 QVIFDQTEKKDLVCWTTMISAYVESDYPQEALRVFEEMCCSGIKPDVVSMFSVISACANLGILDKAKWVHSCIHVNGLESELSINNALINMYAKCGGLDATRDVFEKMPRRNVVSWSSMINALSMHGEASDALSLFARMKQENVEPNEVTFVGVLYGCSHSGLVEEGKKIFASMTDEYNITPKLEHYGCMVDLFGRANLLREALEVIESMPVASNVVIWGSLMSACRIHGELELGKFAAKRILELEPDHDGALVLMSNIYAREQRWEDVRNIRRVMEEKNVFKEKGLSRIDQNGKSHEFLIGDKRHKQSNEIYAKLDEVVSKLKLAGYVPDCGSVLVDVEEEEKKDLVLWHSEKLALCFGLMNEEKEEEKDSCGVIRIVKNLRVCEDCHLFFKLVSKVYEREIIVRDRTRFHCYKNGLCSCRDYW 722 HSP 2 Score: 114.005 bits (284), Expect = 1.063e-25 Identity = 73/281 (25.98%), Postives = 134/281 (47.69%), Query Frame = -2 Query: 619 RLIFDQMVEKDLVSWSAMISGYAESDQPQEALRLFKELQILGIRPDQVTMLSVISACANLGVLDKAKWIHVYADKNGFGGSLRINNALIDMYAKCGSLERARNVFEKMTSRN-------------------------------VISWTGMINAFAIHGDANNALRYFQKMKEARVEPNGVTFVGVLYACSHAGLVEDGRKIFASMINEHNITPKHEHYGCMVDLLGRANLLREAVEIVETMPFAPNVVIWGSLMSACQIHGETE--LGEFTAKRVLELEPD 1362 R +FD+M +D+V+W+ MI Y EA +LF+E++ + PD++ + +++SAC G + + I+ + +N + AL+ MYA G ++ AR F KM+ RN ++ WT MI+A+ ALR F++M + ++P+ V+ V+ AC++ G++ D K S I+ + + + ++++ + L ++ E MP NVV W S+++A +HGE L F + +EP+ Sbjct: 166 RNVFDEMSHRDVVTWNTMIERYCRFGLVDEAFKLFEEMKDSNVMPDEMILCNIVSACGRTGNMRYNRAIYEFLIENDVRMDTHLLTALVTMYAGAGCMDMAREFFRKMSVRNLFVSTAMVSGYSKCGRLDDAQVIFDQTEKKDLVCWTTMISAYVESDYPQEALRVFEEMCCSGIKPDVVSMFSVISACANLGIL-DKAKWVHSCIHVNGLESELSINNALINMYAKCGGLDATRDVFEKMP-RRNVVSWSSMINALSMHGEASDALSLFARMKQENVEPN 444 HSP 3 Score: 90.1225 bits (222), Expect = 7.302e-18 Identity = 52/231 (22.51%), Postives = 108/231 (46.75%), Query Frame = -2 Query: 634 VSWSAMISGYAESDQPQEALRLFKELQILGIRPDQVTMLSVISACANLGVLDKAKWIHVYADKNGFGGSLRINNALIDMYAKCGSLERARNVFEKMTSRNVISWTGMINAFAIHGDANNALRYFQKMKEARVEPNGVTFVGVLYACSHAGLVEDGRKIFASMINEHNITPKHEHYGCMVDLLGRANLLREAVEIVETMPFAPNVVIWGSLMSACQIHGETELGEFTAKRVL 1326 + ++ + + S +P+ + ++ ++ +G R DQ + L ++ A + + L + +H A K + +DMYA CG + ARNVF++M+ R+V++W MI + G + A + F++MK++ V P+ + ++ AC G + R I+ +I E+++ +V + A + A E M + +S + G ++ G +V+ Sbjct: 77 IVFNPFLRDLSRSSEPRATILFYQRIRHVGGRLDQFSFLPILKAVSKVSALFEGMELHGVAFKIATLCDPFVETGFMDMYASCGRINYARNVFDEMSHRDVVTWNTMIERYCRFGLVDEAFKLFEEMKDSNVMPDEMILCNIVSACGRTGNMRYNRAIYEFLI-ENDVRMDTHLLTALVTMYAGAGCMDMAREFFRKMS------VRNLFVSTAMVSGYSKCGRLDDAQVI 300
BLAST of g.arboreum_cottongen_reftransV1_0010582 vs. ExPASy Swiss-Prot
Match: PP330_ARATH (Pentatricopeptide repeat-containing protein At4g21065 OS=Arabidopsis thaliana GN=PCMP-H28 PE=2 SV=2) HSP 1 Score: 450.669 bits (1158), Expect = 2.381e-151 Identity = 202/418 (48.33%), Postives = 299/418 (71.53%), Query Frame = -2 Query: 106 IFDQMVEKDLVSWSAMISGYAESDQPQEALRLFKELQILGIRPDQVTMLSVISACANLGVLDKAKWIHVYADKNGFGGSLRINNALIDMYAKCGSLERARNVFEKMTSRNVISWTGMINAFAIHGDANNALRYFQKMKEAR-VEPNGVTFVGVLYACSHAGLVEDGRKIFASMINEHNITPKHEHYGCMVDLLGRANLLREAVEIVETMPFAPNVVIWGSLMSACQIHGETELGEFTAKRVLELEPDHDGALVLLSNIYAKERKWQNVGDLRQLMKERGISKERGYSRIELNNEVHEFLVADRNHKQAYEIYEKLNEVVSRLKLDGYAPNTGCVLVDLEEEEKREVVLWHSEKLALCYGLINGAKDSCIRIVKNLRVCEDCHTFLKLVSKVYRREIIVRDRTRFHHYRDGVCSCRDYW 1356 +FD+M EKDLV+W+++I+G+AE+ +P+EAL L+ E+ GI+PD T++S++SACA +G L K +HVY K G +L +N L+D+YA+CG +E A+ +F++M +N +SWT +I A++G A+ F+ M+ + P +TFVG+LYACSH G+V++G + F M E+ I P+ EH+GCMVDLL RA +++A E +++MP PNVVIW +L+ AC +HG+++L EF ++L+LEP+H G VLLSN+YA E++W +V +R+ M G+ K G+S +E+ N VHEFL+ D++H Q+ IY KL E+ RL+ +GY P V VD+EEEEK V++HSEK+A+ + LI+ + S I +VKNLRVC DCH +KLVSKVY REI+VRDR+RFHH+++G CSC+DYW Sbjct: 178 VFDKMPEKDLVAWNSVINGFAENGKPEEALALYTEMNSKGIKPDGFTIVSLLSACAKIGALTLGKRVHVYMIKVGLTRNLHSSNVLLDLYARCGRVEEAKTLFDEMVDKNSVSWTSLIVGLAVNGFGKEAIELFKYMESTEGLLPCEITFVGILYACSHCGMVKEGFEYFRRMREEYKIEPRIEHFGCMVDLLARAGQVKKAYEYIKSMPMQPNVVIWRTLLGACTVHGDSDLAEFARIQILQLEPNHSGDYVLLSNMYASEQRWSDVQKIRKQMLRDGVKKVPGHSLVEVGNRVHEFLMGDKSHPQSDAIYAKLKEMTGRLRSEGYVPQISNVYVDVEEEEKENAVVYHSEKIAIAFMLISTPERSPITVVKNLRVCADCHLAIKLVSKVYNREIVVRDRSRFHHFKNGSCSCQDYW 595 HSP 2 Score: 118.627 bits (296), Expect = 2.420e-27 Identity = 64/217 (29.49%), Postives = 112/217 (51.61%), Query Frame = -2 Query: 673 WSAMISGYAESDQPQEALRLFKELQILG-IRPDQVTMLSVISACANLGVLDKAKWIHVYADKNGFGGSLRINNALIDMYAKCGSLERARNVFEKMTSRNVISWTGMINAFAIHGDANNALRYFQKMKEARVEPNGVTFVGVLYACSHAGLVEDGRKIFASMINEHNITPKHEHYGCMVDLLGRANLLREAVEIVETMPFAPNVVIWGSLMSACQIHG 1320 W+ +I GYAE A L++E+++ G + PD T +I A + + + IH ++GFG + + N+L+ +YA CG + A VF+KM +++++W +IN FA +G AL + +M ++P+G T V +L AC+ G + G+++ MI +T ++DL R + EA + + M N V W SL+ ++G Sbjct: 88 WNTLIRGYAEIGNSISAFSLYREMRVSGLVEPDTHTYPFLIKAVTTMADVRLGETIHSVVIRSGFGSLIYVQNSLLHLYANCGDVASAYKVFDKMPEKDLVAWNSVINGFAENGKPEEALALYTEMNSKGIKPDGFTIVSLLSACAKIGALTLGKRVHVYMIKV-GLTRNLHSSNVLLDLYARCGRVEEAKTLFDEM-VDKNSVSWTSLIVGLAVNG 302 HSP 3 Score: 72.4034 bits (176), Expect = 3.077e-12 Identity = 39/150 (26.00%), Postives = 88/150 (58.67%), Query Frame = -2 Query: 922 RLIFDQMVEKDLVSWSAMISGYAESDQPQEALRLFKELQIL-GIRPDQVTMLSVISACANLGVLDKA-KWIHVYADKNGFGGSLRINNALIDMYAKCGSLERARNVFEKMTSR-NVISWTGMINAFAIHGDANNALRYFQKMKEARVEPN 1362 + +FD+MV+K+ VSW+++I G A + +EA+ LFK ++ G+ P ++T + ++ AC++ G++ + ++ ++ + ++D+ A+ G +++A + M + NV+ W ++ A +HGD++ L F +++ ++EPN Sbjct: 277 KTLFDEMVDKNSVSWTSLIVGLAVNGFGKEAIELFKYMESTEGLLPCEITFVGILYACSHCGMVKEGFEYFRRMREEYKIEPRIEHFGCMVDLLARAGQVKKAYEYIKSMPMQPNVVIWRTLLGACTVHGDSD--LAEFARIQILQLEPN 424
BLAST of g.arboreum_cottongen_reftransV1_0010582 vs. ExPASy Swiss-Prot
Match: PP175_ARATH (Pentatricopeptide repeat-containing protein At2g29760, chloroplastic OS=Arabidopsis thaliana GN=PCMP-H33 PE=2 SV=1) HSP 1 Score: 442.965 bits (1138), Expect = 1.787e-146 Identity = 205/421 (48.69%), Postives = 289/421 (68.65%), Query Frame = -2 Query: 106 RLIFDQMVEKDLVSWSAMISGYAESDQPQEALRLFKELQIL-GIRPDQVTMLSVISACANLGVLDKAKWIHVYADKNGFGGSLRINNALIDMYAKCGSLERARNVFEKMTSRNVISWTGMINAFAIHGDANNALRYFQKMKEARVEPNGVTFVGVLYACSHAGLVEDGRKIFASMINEHNITPKHEHYGCMVDLLGRANLLREAVEIVETMPFAPNVVIWGSLMSACQIHGETELGEFTAKRVLELEPDHDGALVLLSNIYAKERKWQNVGDLRQLMKERGISKERGYSRIELNNEVHEFLVADRNHKQAYEIYEKLNEVVSRLKLDGYAPNTGCVLVDLEEEEKREVVL-WHSEKLALCYGLINGAKDSCIRIVKNLRVCEDCHTFLKLVSKVYRREIIVRDRTRFHHYRDGVCSCRDYW 1362 R + + M +KD+V+W+A+IS Y ++ +P EAL +F ELQ+ ++ +Q+T++S +SACA +G L+ +WIH Y K+G + + +ALI MY+KCG LE++R VF + R+V W+ MI A+HG N A+ F KM+EA V+PNGVTF V ACSH GLV++ +F M + + I P+ +HY C+VD+LGR+ L +AV+ +E MP P+ +WG+L+ AC+IH L E R+LELEP +DGA VLLSNIYAK KW+NV +LR+ M+ G+ KE G S IE++ +HEFL D H + ++Y KL+EV+ +LK +GY P VL +EEEE +E L HSEKLA+CYGLI+ IR++KNLRVC DCH+ KL+S++Y REIIVRDR RFHH+R+G CSC D+W Sbjct: 318 REVLNSMPQKDIVAWNALISAYEQNGKPNEALIVFHELQLQKNMKLNQITLVSTLSACAQVGALELGRWIHSYIKKHGIRMNFHVTSALIHMYSKCGDLEKSREVFNSVEKRDVFVWSAMIGGLAMHGCGNEAVDMFYKMQEANVKPNGVTFTNVFCACSHTGLVDEAESLFHQMESNYGIVPEEKHYACIVDVLGRSGYLEKAVKFIEAMPIPPSTSVWGALLGACKIHANLNLAEMACTRLLELEPRNDGAHVLLSNIYAKLGKWENVSELRKHMRVTGLKKEPGCSSIEIDGMIHEFLSGDNAHPMSEKVYGKLHEVMEKLKSNGYEPEISQVLQIIEEEEMKEQSLNLHSEKLAICYGLISTEAPKVIRVIKNLRVCGDCHSVAKLISQLYDREIIVRDRYRFHHFRNGQCSCNDFW 738 HSP 2 Score: 127.102 bits (318), Expect = 6.114e-30 Identity = 72/260 (27.69%), Postives = 135/260 (51.92%), Query Frame = -2 Query: 673 IFDQMVEKDLVSWSAMISGYAESDQPQEALRLFKELQILGIRPDQVTMLSVISACANLGVLDKAKWIHVYADKNGFGGSLRINNALIDMYAKCGSLERARNVFEKMTSRNVISWTGMINAFAI-------------------------------HGDANNALRYFQKMK-EARVEPNGVTFVGVLYACSHAGLVEDGRKIFASMINEHNITPKHEHYGCMVDLLGRANLLREAVEIVETMPFAPNVVIWGSLMSACQIHG 1356 +F + EKD+VSW++MI+G+ + P +AL LFK+++ ++ VTM+ V+SACA + L+ + + Y ++N +L + NA++DMY KCGS+E A+ +F+ M ++ ++WT M++ +AI +G N AL F +++ + ++ N +T V L AC+ G +E GR I S I +H I ++ + + L ++ E+ ++ +V +W +++ +HG Sbjct: 188 VFTTIKEKDVVSWNSMINGFVQKGSPDKALELFKKMESEDVKASHVTMVGVLSACAKIRNLEFGRQVCSYIEENRVNVNLTLANAMLDMYTKCGSIEDAKRLFDAMEEKDNVTWTTMLDGYAISEDYEAAREVLNSMPQKDIVAWNALISAYEQNGKPNEALIVFHELQLQKNMKLNQITLVSTLSACAQVGALELGRWIH-SYIKKHGIRMNFHVTSALIHMYSKCGDLEKSREVFNSVE-KRDVFVWSAMIGGLAMHG 445 HSP 3 Score: 110.153 bits (274), Expect = 2.214e-24 Identity = 71/251 (28.29%), Postives = 121/251 (48.21%), Query Frame = -2 Query: 613 RLIFDQMVEKDLVSWSAMISGYAESDQPQEALRLFKEL-QILGIRPDQVTMLSVISACANLGVLDKAKWIHVYADKNGFGGSLRINNALIDMYAKCGSLERARNVFEKMTSRNVISWTGMINAFAIHGDANNALRYFQKMKEARVEPNGVTFVGVLYACSHAGLVEDGRKIFASMINEHNITPKHEHYGCMVDLLGRANLLREAVEIVETMPFAPNVVIWGSLMSACQIHGETELGEFTAKRVLELEPDHD 1362 R +FD++ + + +W+ +I YA P ++ F ++ P++ T +I A A + L + +H A K+ G + + N+LI Y CG L+ A VF + ++V+SW MIN F G + AL F+KM+ V+ + VT VGVL AC+ +E GR++ S I E+ + M+D+ + + +A + + M NV W +++ I + E A+ VL P D Sbjct: 84 RKVFDEIPKPNSFAWNTLIRAYASGPDPVLSIWAFLDMVSESQCYPNKYTFPFLIKAAAEVSSLSLGQSLHGMAVKSAVGSDVFVANSLIHCYFSCGDLDSACKVFTTIKEKDVVSWNSMINGFVQKGSPDKALELFKKMESEDVKASHVTMVGVLSACAKIRNLEFGRQV-CSYIEENRVNVNLTLANAMLDMYTKCGSIEDAKRLFDAMEEKDNVT-WTTMLDGYAISEDYE----AAREVLNSMPQKD 328
BLAST of g.arboreum_cottongen_reftransV1_0010582 vs. ExPASy Swiss-Prot
Match: PP425_ARATH (Pentatricopeptide repeat-containing protein At5g48910 OS=Arabidopsis thaliana GN=PCMP-H38 PE=2 SV=1) HSP 1 Score: 431.409 bits (1108), Expect = 2.999e-143 Identity = 200/419 (47.73%), Postives = 298/419 (71.12%), Query Frame = -2 Query: 106 RLIFDQMVEKDLVSWSAMISGYAESDQPQEALRLFKELQILGIRPDQVTMLSVISACANLGVLDKAKWIHVYADKNGFGGSLRINNALIDMYAKCGSLERARNVFEKMTSRNVISWTGMINAFAIHGDANNALRYFQKMKEARVEPNGVTFVGVLYACSHAGLVEDGRKIFASMINEHNITPKHEHYGCMVDLLGRANLLREAVEIVETMPFAPNVVIWGSLMSACQIHGETELGEFTAKRVLELEPDHDGALVLLSNIYAKERKWQNVGDLRQLMKERGISKERGYSRIELNNEVHEFLVADRNHKQAYEIYEKLNEVVSRLKLDGYAPNTGCVLVDLEEEEKREVVLWHSEKLALCYGLINGAKDSCIRIVKNLRVCEDCHTFLKLVSKVYRREIIVRDRTRFHHYRDGVCSCRDYW 1362 R++FD+M ++ +VSW+ MISGY+ + ++A+ +F+E++ IRP+ VT++SV+ A + LG L+ +W+H+YA+ +G + +ALIDMY+KCG +E+A +VFE++ NVI+W+ MIN FAIHG A +A+ F KM++A V P+ V ++ +L ACSH GLVE+GR+ F+ M++ + P+ EHYGCMVDLLGR+ LL EA E + MP P+ VIW +L+ AC++ G E+G+ A ++++ P GA V LSN+YA + W V ++R MKE+ I K+ G S I+++ +HEF+V D +H +A EI L E+ +L+L GY P T VL++LEEE+K V+ +HSEK+A +GLI+ + IRIVKNLR+CEDCH+ +KL+SKVY+R+I VRDR RFHH++DG CSC DYW Sbjct: 228 RMLFDKMRQRSVVSWNTMISGYSLNGFFKDAVEVFREMKKGDIRPNYVTLVSVLPAISRLGSLELGEWLHLYAEDSGIRIDDVLGSALIDMYSKCGIIEKAIHVFERLPRENVITWSAMINGFAIHGQAGDAIDCFCKMRQAGVRPSDVAYINLLTACSHGGLVEEGRRYFSQMVSVDGLEPRIEHYGCMVDLLGRSGLLDEAEEFILNMPIKPDDVIWKALLGACRMQGNVEMGKRVANILMDMVPHDSGAYVALSNMYASQGNWSEVSEMRLRMKEKDIRKDPGCSLIDIDGVLHEFVVEDDSHPKAKEINSMLVEISDKLRLAGYRPITTQVLLNLEEEDKENVLHYHSEKIATAFGLISTSPGKPIRIVKNLRICEDCHSSIKLISKVYKRKITVRDRKRFHHFQDGSCSCMDYW 646 HSP 2 Score: 118.242 bits (295), Expect = 3.865e-27 Identity = 77/280 (27.50%), Postives = 135/280 (48.21%), Query Frame = -2 Query: 667 IFDQMVEKDLVSWSAMISGYAESDQPQE--ALRLFKELQI-LGIRPDQVTMLSVISACANLGVLDKAKWIHVYADKNGFGGSLRINNALIDMYAKCGSLE---------------------------------------------RARNVFEKMTSRNVISWTGMINAFAIHGDANNALRYFQKMKEARVEPNGVTFVGVLYACSHAGLVEDGR--KIFASMINEHNITPKHEHYGCMVDLLGRANLLREAVEIVETMPFAPNVVIWGSLMSACQIHGET 1356 IF+QM +++ SW+ +I G++ESD+ + A+ LF E+ + P++ T SV+ ACA G + + K IH A K GFGG + + L+ MY CG ++ AR +F+KM R+V+SW MI+ ++++G +A+ F++MK+ + PN VT V VL A S G +E G ++A + I ++D+ + ++ +A+ + E +P NV+ W ++++ IHG+ Sbjct: 81 IFNQMPQRNCFSWNTIIRGFSESDEDKALIAITLFYEMMSDEFVEPNRFTFPSVLKACAKTGKIQEGKQIHGLALKYGFGGDEFVMSNLVRMYVMCGFMKDARVLFYKNIIEKDMVVMTDRRKRDGEIVLWNVMIDGYMRLGDCKAARMLFDKMRQRSVVSWNTMISGYSLNGFFKDAVEVFREMKKGDIRPNYVTLVSVLPAISRLGSLELGEWLHLYA---EDSGIRIDDVLGSALIDMYSKCGIIEKAIHVFERLP-RENVITWSAMINGFAIHGQA 356
BLAST of g.arboreum_cottongen_reftransV1_0010582 vs. ExPASy Swiss-Prot
Match: PP449_ARATH (Pentatricopeptide repeat-containing protein At5g66520 OS=Arabidopsis thaliana GN=PCMP-H61 PE=2 SV=1) HSP 1 Score: 420.239 bits (1079), Expect = 3.319e-139 Identity = 196/418 (46.89%), Postives = 282/418 (67.46%), Query Frame = -2 Query: 106 IFDQMVEKDLVSWSAMISGYAESDQPQEALRLFKELQILGIRPDQVTMLSVISACANLGVLDKAKWIHVYADKNGFGGSLRINNALIDMYAKCGSLERARNVFEKMTSRNVISWTGMINAFAIHGDANNALRYFQKMKEARVEPNGVTFVGVLYACSHAGLVEDGRKIFASMINEHNITPKHEHYGCMVDLLGRANLLREAVEIVETMPFAPNVVIWGSLMSACQIHGETELGEFTAKRVLELEPDHDGALVLLSNIYAKERKWQNVGDLRQLMKERGISKERGYSRIELNNEVHEFLVADRNHKQAYEIYEKLNEVVSRLKLDGYAPNTGCVLVDLEEEEKRE-VVLWHSEKLALCYGLINGAKDSCIRIVKNLRVCEDCHTFLKLVSKVYRREIIVRDRTRFHHYRDGVCSCRDYW 1356 +F +M EK+ +SW+ MISGY ++D +EAL+LF E+Q + PD V++ + +SACA LG L++ KWIH Y +K + LIDMYAKCG +E A VF+ + ++V +WT +I+ +A HG A+ F +M++ ++PN +TF VL ACS+ GLVE+G+ IF SM ++N+ P EHYGC+VDLLGRA LL EA ++ MP PN VIWG+L+ AC+IH ELGE + ++ ++P H G V +NI+A ++KW + R+LMKE+G++K G S I L HEFL DR+H + +I K + +L+ +GY P +L+DL ++++RE +V HSEKLA+ YGLI + IRI+KNLRVC+DCH KL+SK+Y+R+I++RDRTRFHH+RDG CSC DYW Sbjct: 203 LFRKMAEKNAISWTTMISGYVQADMNKEALQLFHEMQNSDVEPDNVSLANALSACAQLGALEQGKWIHSYLNKTRIRMDSVLGCVLIDMYAKCGEMEEALEVFKNIKKKSVQAWTALISGYAYHGHGREAISKFMEMQKMGIKPNVITFTAVLTACSYTGLVEEGKLIFYSMERDYNLKPTIEHYGCIVDLLGRAGLLDEAKRFIQEMPLKPNAVIWGALLKACRIHKNIELGEEIGEILIAIDPYHGGRYVHKANIHAMDKKWDKAAETRRLMKEQGVAKVPGCSTISLEGTTHEFLAGDRSHPEIEKIQSKWRIMRRKLEENGYVPELEEMLLDLVDDDEREAIVHQHSEKLAITYGLIKTKPGTIIRIMKNLRVCKDCHKVTKLISKIYKRDIVMRDRTRFHHFRDGKCSCGDYW 620
BLAST of g.arboreum_cottongen_reftransV1_0010582 vs. ExPASy Swiss-Prot
Match: PP145_ARATH (Pentatricopeptide repeat-containing protein At2g02980, chloroplastic OS=Arabidopsis thaliana GN=PCMP-H26 PE=2 SV=2) HSP 1 Score: 419.468 bits (1077), Expect = 3.952e-139 Identity = 191/420 (45.48%), Postives = 289/420 (68.81%), Query Frame = -2 Query: 106 RLIFDQMVEKDLVSWSAMISGYAESDQPQEALRLFKELQILGIRPDQVTMLSVISACANLGVLDKAKWIHVYADKNGFGGSLRINNALIDMYAKCGSLERARNVFEKMTSRNVISWTGMINAFAIHGDANNALRYFQKMKEARVEPNGVTFVGVLYACSHAGLVEDGRKIFASMINEHNITPKHEHYGCMVDLLGRANLLREAVEIVETMPFAPNVVIWGSLMSACQIHGETELGEFTAKRVLELEPDHDGALVLLSNIYAKERKWQNVGDLRQLMKERGISKERGYSRIELNNEVHEFLVADRNHKQAYEIYEKLNEVVSRLKLDGYAPNTGCVL-VDLEEEEKREVVLWHSEKLALCYGLINGAKDSCIRIVKNLRVCEDCHTFLKLVSKVYRREIIVRDRTRFHHYRDGVCSCRDYW 1362 R +FD++VE +V ++AMI+GYA ++P EAL LF+E+Q ++P+++T+LSV+S+CA LG LD KWIH YA K+ F +++N ALIDM+AKCGSL+ A ++FEKM ++ +W+ MI A+A HG A ++ F++M+ V+P+ +TF+G+L ACSH G VE+GRK F+ M+++ I P +HYG MVDLL RA L +A E ++ +P +P ++W L++AC H +L E ++R+ EL+ H G V+LSN+YA+ +KW+ V LR++MK+R K G S IE+NN VHEF D +++ L+E+V LKL GY P+T V+ ++ ++EK + +HSEKLA+ +GL+N + IR+VKNLRVC DCH KL+S ++ R++++RD RFHH+ DG CSC D+W Sbjct: 184 RCVFDRIVEPCVVCYNAMITGYARRNRPNEALSLFREMQGKYLKPNEITLLSVLSSCALLGSLDLGKWIHKYAKKHSFCKYVKVNTALIDMFAKCGSLDDAVSIFEKMRYKDTQAWSAMIVAYANHGKAEKSMLMFERMRSENVQPDEITFLGLLNACSHTGRVEEGRKYFSQMVSKFGIVPSIKHYGSMVDLLSRAGNLEDAYEFIDKLPISPTPMLWRILLAACSSHNNLDLAEKVSERIFELDDSHGGDYVILSNLYARNKKWEYVDSLRKVMKDRKAVKVPGCSSIEVNNVVHEFFSGDGVKSATTKLHRALDEMVKELKLSGYVPDTSMVVHANMNDQEKEITLRYHSEKLAITFGLLNTPPGTTIRVVKNLRVCRDCHNAAKLISLIFGRKVVLRDVQRFHHFEDGKCSCGDFW 603 HSP 2 Score: 124.02 bits (310), Expect = 3.777e-29 Identity = 86/318 (27.04%), Postives = 153/318 (48.11%), Query Frame = -2 Query: 415 RLIFDQMVEKDLVSWSAMISGYAESDQPQEALRLFKELQILGIRPDQVTMLSVISACANLGVLDKAKWIHVYADKNGFGGSLRINNALIDMYAKCGSLERARNVFEKMTSRNVISWTGMINAFAIHGDANNALRYFQKMKEARVEPNGVTFVGVLYACSHAGLVEDGRKIFASMINEHNITPKHEHYGCMVDLLGRANLLREAVEIVETMPFAPNVVIWGSLMSACQIHGETE--LGEFTAKRVLELEPDHDGALVLLSNIYAKERKWQNVGDLRQLMKERGISKERGYSRIELNNEVHEFLVADRNHKQAYEIYEKL 1362 R +F+ M E D+V +++M GY+ P E LF E+ GI PD T S++ ACA L++ + +H + K G ++ + LI+MY +C ++ AR VF+++ V+ + MI +A N AL F++M+ ++PN +T + VL +C+ G ++ G+ I +H+ + ++D+ + L +AV I E M + + W +++ A HG+ E + F R ++PD L LL+ R + Q++ + GI I+ + + L N + AYE +KL Sbjct: 83 RHLFEAMSEPDIVIFNSMARGYSRFTNPLEVFSLFVEILEDGILPDNYTFPSLLKACAVAKALEEGRQLHCLSMKLGLDDNVYVCPTLINMYTECEDVDSARCVFDRIVEPCVVCYNAMITGYARRNRPNEALSLFREMQGKYLKPNEITLLSVLSSCALLGSLDLGKWIH-KYAKKHSFCKYVKVNTALIDMFAKCGSLDDAVSIFEKMRYK-DTQAWSAMIVAYANHGKAEKSMLMFERMRSENVQPDEITFLGLLNACSHTGRVEEGRKYFSQMVSKFGI-----VPSIKHYGSMVDLLSRAGNLEDAYEFIDKL 393
BLAST of g.arboreum_cottongen_reftransV1_0010582 vs. ExPASy Swiss-Prot
Match: PP354_ARATH (Pentatricopeptide repeat-containing protein ELI1, chloroplastic OS=Arabidopsis thaliana GN=ELI1 PE=3 SV=1) HSP 1 Score: 418.313 bits (1074), Expect = 3.145e-138 Identity = 195/421 (46.32%), Postives = 282/421 (66.98%), Query Frame = -2 Query: 106 RLIFDQMVEKDLVSWSAMISGYAESDQPQEALRLFKELQILG-IRPDQVTMLSVISACANLGVLDKAKWIHVYADKNGFGGSLRINNALIDMYAKCGSLERARNVFEKMTSRNVISWTGMINAFAIHGDANNALRYFQKMKE-ARVEPNGVTFVGVLYACSHAGLVEDGRKIFASMINEHNITPKHEHYGCMVDLLGRANLLREAVEIVETMPFAPNVVIWGSLMSACQIHGETELGEFTAKRVLELEPDHDGALVLLSNIYAKERKWQNVGDLRQLMKERGISKERGYSRIELNNEVHEFLVADRNHKQAYEIYEKLNEVVSRLKLDGYAPNTGCVLVDLEEEEKREVVLWHSEKLALCYGLINGAKDSCIRIVKNLRVCEDCHTFLKLVSKVYRREIIVRDRTRFHHYRDGVCSCRDYW 1362 R +FD M E+D+VSW+ MI GYA+ P +AL LF++L G +PD++T+++ +SAC+ +G L+ +WIHV+ + ++++ LIDMY+KCGSLE A VF +++++W MI +A+HG + +ALR F +M+ ++P +TF+G L AC+HAGLV +G +IF SM E+ I PK EHYGC+V LLGRA L+ A E ++ M + V+W S++ +C++HG+ LG+ A+ ++ L + G VLLSNIYA ++ V +R LMKE+GI KE G S IE+ N+VHEF DR H ++ EIY L ++ R+K GY PNT VL DLEE EK + + HSE+LA+ YGLI+ S ++I KNLRVC DCHT KL+SK+ R+I++RDR RFHH+ DG CSC D+W Sbjct: 212 RALFDSMCERDIVSWNVMIDGYAQHGFPNDALMLFQKLLAEGKPKPDEITVVAALSACSQIGALETGRWIHVFVKSSRIRLNVKVCTGLIDMYSKCGSLEEAVLVFNDTPRKDIVAWNAMIAGYAMHGYSQDALRLFNEMQGITGLQPTDITFIGTLQACAHAGLVNEGIRIFESMGQEYGIKPKIEHYGCLVSLLGRAGQLKRAYETIKNMNMDADSVLWSSVLGSCKLHGDFVLGKEIAEYLIGLNIKNSGIYVLLSNIYASVGDYEGVAKVRNLMKEKGIVKEPGISTIEIENKVHEFRAGDREHSKSKEIYTMLRKISERIKSHGYVPNTNTVLQDLEETEKEQSLQVHSERLAIAYGLISTKPGSPLKIFKNLRVCSDCHTVTKLISKITGRKIVMRDRNRFHHFTDGSCSCGDFW 632 HSP 2 Score: 103.99 bits (258), Expect = 1.925e-22 Identity = 71/263 (27.00%), Postives = 123/263 (46.77%), Query Frame = -2 Query: 664 IFDQMVEKDLVSWSAMISGYAESDQPQEALRLFKELQILGIRPDQVTMLSVISACANLGVLDKAKWIHVYADKNGFG-------------------------------GSLRINNALIDMYAKCGSLERARNVFEKMTSRNVISWTGMINAFAIHGDANNALRYFQK-MKEARVEPNGVTFVGVLYACSHAGLVEDGRKIFASMINEHNITPKHEHYGCMVDLLGRANLLREAVEIVETMPFAPNVVIWGSLMSACQIHGETE 1356 +F Q ++ DL ++A I+ + + +A L+ +L I P++ T S++ +C+ K IH + K G G SL + A+I YAK G++E AR +F+ M R+++SW MI+ +A HG N+AL FQK + E + +P+ +T V L ACS G +E GR I + I + ++D+ + L EAV + P ++V W ++++ +HG ++ Sbjct: 86 LFHQTIDPDLFLFTAAINTASINGLKDQAFLLYVQLLSSEINPNEFTFSSLLKSCST----KSGKLIHTHVLKFGLGIDPYVATGLVDVYAKGGDVVSAQKVFDRMPERSLVSSTAMITCYAKQGNVEAARALFDSMCERDIVSWNVMIDGYAQHGFPNDALMLFQKLLAEGKPKPDEITVVAALSACSQIGALETGRWIHV-FVKSSRIRLNVKVCTGLIDMYSKCGSLEEAVLVFNDTP-RKDIVAWNAMIAGYAMHGYSQ 342
BLAST of g.arboreum_cottongen_reftransV1_0010582 vs. ExPASy Swiss-Prot
Match: PP410_ARATH (Putative pentatricopeptide repeat-containing protein At5g40405 OS=Arabidopsis thaliana GN=PCMP-H14 PE=3 SV=1) HSP 1 Score: 410.994 bits (1055), Expect = 1.041e-135 Identity = 191/419 (45.58%), Postives = 277/419 (66.11%), Query Frame = -2 Query: 106 RLIFDQMVEKDLVSWSAMISGYAESDQPQEALRLFKELQILGIRPDQVTMLSVISACANLGVLDKAKWIHVYADKNGFGGSLRINNALIDMYAKCGSLERARNVFEKMTSRNVISWTGMINAFAIHGDANNALRYFQKMKEARVEPNGVTFVGVLYACSHAGLVEDGRKIFASMINEHNITPKHEHYGCMVDLLGRANLLREAVEIVETMPFAPNVVIWGSLMSACQIHGETELGEFTAKRVLELEPDHDGALVLLSNIYAKERKWQNVGDLRQLMKERGISKERGYSRIELNNEVHEFLVADRNHKQAYEIYEKLNEVVSRLKLDGYAPNTGCVLVDLEEEEKREVVLWHSEKLALCYGLINGAKDSCIRIVKNLRVCEDCHTFLKLVSKVYRREIIVRDRTRFHHYRDGVCSCRDYW 1362 R +F+ M E+D ++W+AMISGYA+ + +EAL +F +Q+ G++ + V M+SV+SAC LG LD+ +W H Y ++N ++R+ L+D+YAKCG +E+A VF M +NV +W+ +N A++G L F MK+ V PN VTFV VL CS G V++G++ F SM NE I P+ EHYGC+VDL RA L +AV I++ MP P+ +W SL+ A +++ ELG +K++LELE + GA VLLSNIYA W NV +RQ MK +G+ K+ G S +E+N EVHEF V D++H + +I ++ RL+L GY +T V+ D++EEEK + + HSEK A+ +G+++ +D IRIVKNLRVC DCH ++SK++ REIIVRDR RFHH++DG CSC +W Sbjct: 194 RKLFEGMPERDPIAWNAMISGYAQVGESREALNVFHLMQLEGVKVNGVAMISVLSACTQLGALDQGRWAHSYIERNKIKITVRLATTLVDLYAKCGDMEKAMEVFWGMEEKNVYTWSSALNGLAMNGFGEKCLELFSLMKQDGVTPNAVTFVSVLRGCSVVGFVDEGQRHFDSMRNEFGIEPQLEHYGCLVDLYARAGRLEDAVSIIQQMPMKPHAAVWSSLLHASRMYKNLELGVLASKKMLELETANHGAYVLLSNIYADSNDWDNVSHVRQSMKSKGVRKQPGCSVMEVNGEVHEFFVGDKSHPKYTQIDAVWKDISRRLRLAGYKADTTPVMFDIDEEEKEDALCLHSEKAAIAFGIMSLKEDVPIRIVKNLRVCGDCHQVSMMISKIFNREIIVRDRNRFHHFKDGHCSCNGFW 612 HSP 2 Score: 91.6633 bits (226), Expect = 1.945e-18 Identity = 65/264 (24.62%), Postives = 115/264 (43.56%), Query Frame = -2 Query: 664 IFDQMVEKDLVSWSAMISGYAESDQPQEALRLFKELQILG--IRPDQVTMLSVISACANLGVLDKAKWIHVYADKNGFGGSLRINNALIDMYA-------------------------------KCGSLERARNVFEKMTSRNVISWTGMINAFAIHGDANNALRYFQKMKEARVEPNGVTFVGVLYACSHAGLVEDGRKIFASMINEHNITPKHEHYGCMVDLLGRANLLREAVEIVETMPFAPNVVIWGSLMSACQIHGETE 1356 I D+ + L + ++MI + +S P+++ ++ + G ++PD T+ ++ AC L + + +H + GF + LI +YA +CG + AR +FE M R+ I+W MI+ +A G++ AL F M+ V+ NGV + VL AC+ G ++ GR S I + I +VDL + + +A+E+ M NV W S ++ ++G E Sbjct: 62 ILDRSEKPTLFALNSMIRAHCKSPVPEKSFDFYRRILSSGNDLKPDNYTVNFLVQACTGLRMRETGLQVHGMTIRRGFDNDPHVQTGLISLYAELGCLDSCHKVFNSIPCPDFVCRTAMVTACARCGDVVFARKLFEGMPERDPIAWNAMISGYAQVGESREALNVFHLMQLEGVKVNGVAMISVLSACTQLGALDQGRWAH-SYIERNKIKITVRLATTLVDLYAKCGDMEKAMEVFWGME-EKNVYTWSSALNGLAMNGFGE 323
BLAST of g.arboreum_cottongen_reftransV1_0010582 vs. ExPASy Swiss-Prot
Match: PPR21_ARATH (Pentatricopeptide repeat-containing protein At1g08070, chloroplastic OS=Arabidopsis thaliana GN=PCMP-H12 PE=2 SV=1) HSP 1 Score: 412.92 bits (1060), Expect = 7.152e-135 Identity = 196/419 (46.78%), Postives = 287/419 (68.50%), Query Frame = -2 Query: 106 IFDQMVEKDLVSWSAMISGYAESDQPQEALRLFKELQILGIRPDQVTMLSVISACANLGVLDKAKWIHVYADK--NGFGGSLRINNALIDMYAKCGSLERARNVFEKMTSRNVISWTGMINAFAIHGDANNALRYFQKMKEARVEPNGVTFVGVLYACSHAGLVEDGRKIFASMINEHNITPKHEHYGCMVDLLGRANLLREAVEIVETMPFAPNVVIWGSLMSACQIHGETELGEFTAKRVLELEPDHDGALVLLSNIYAKERKWQNVGDLRQLMKERGISKERGYSRIELNNEVHEFLVADRNHKQAYEIYEKLNEVVSRLKLDGYAPNTGCVLVDLEEEEKREVVLWHSEKLALCYGLINGAKDSCIRIVKNLRVCEDCHTFLKLVSKVYRREIIVRDRTRFHHYRDGVCSCRDYW 1356 +F+++ KD++SW+ +I GY + +EAL LF+E+ G P+ VTMLS++ ACA+LG +D +WIHVY DK G + + +LIDMYAKCG +E A VF + +++ SW MI FA+HG A+ + F +M++ ++P+ +TFVG+L ACSH+G+++ GR IF +M ++ +TPK EHYGCM+DLLG + L +EA E++ M P+ VIW SL+ AC++HG ELGE A+ ++++EP++ G+ VLLSNIYA +W V R L+ ++G+ K G S IE+++ VHEF++ D+ H + EIY L E+ L+ G+ P+T VL ++EEE K + HSEKLA+ +GLI+ + + IVKNLRVC +CH KL+SK+Y+REII RDRTRFHH+RDGVCSC DYW Sbjct: 323 LFERLPYKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGETPNDVTMLSILPACAHLGAIDIGRWIHVYIDKRLKGVTNASSLRTSLIDMYAKCGDIEAAHQVFNSILHKSLSSWNAMIFGFAMHGRADASFDLFSRMRKIGIQPDDITFVGLLSACSHSGMLDLGRHIFRTMTQDYKMTPKLEHYGCMIDLLGHSGLFKEAEEMINMMEMEPDGVIWCSLLKACKMHGNVELGESFAENLIKIEPENPGSYVLLSNIYASAGRWNEVAKTRALLNDKGMKKVPGCSSIEIDSVVHEFIIGDKFHPRNREIYGMLEEMEVLLEKAGFVPDTSEVLQEMEEEWKEGALRHHSEKLAIAFGLISTKPGTKLTIVKNLRVCRNCHEATKLISKIYKREIIARDRTRFHHFRDGVCSCNDYW 741 HSP 2 Score: 166.777 bits (421), Expect = 1.805e-43 Identity = 88/258 (34.11%), Postives = 150/258 (58.14%), Query Frame = -2 Query: 592 IFDQMVEKDLVSWSAMISGYAESDQPQEALRLFKELQILGIRPDQVTMLSVISACANLGVLDKAKWIHVYADKNGFGGSLRINNALIDMYAKCGSLERARNVFEKMTSRNVISWTGMINAFAIHGDANNALRYFQKMKEARVEPNGVTFVGVLYACSHAGLVEDGRKIFASMINE-HNITPKHEHYGCMVDLLGRANLLREAVEIVETMPFAPNVVIWGSLMSACQIHG--ETELGEFTAKRVLELEPDHDGALVLLS 1356 +FD++ KD+VSW+AMISGYAE+ +EAL LFK++ +RPD+ TM++V+SACA G ++ + +H++ D +GFG +L+I NALID+Y+KCG LE A +FE++ ++VISW +I + AL FQ+M + PN VT + +L AC+H G ++ GR I + +T ++D+ + + A ++ ++ ++ W +++ +HG + F+ R + ++PD + LLS Sbjct: 222 LFDEIPVKDVVSWNAMISGYAETGNYKEALELFKDMMKTNVRPDESTMVTVVSACAQSGSIELGRQVHLWIDDHGFGSNLKIVNALIDLYSKCGELETACGLFERLPYKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGETPNDVTMLSILPACAHLGAIDIGRWIHVYIDKRLKGVTNASSLRTSLIDMYAKCGDIEAAHQVFNSI-LHKSLSSWNAMIFGFAMHGRADASFDLFSRMRKIGIQPDDITFVGLLS 478 HSP 3 Score: 108.227 bits (269), Expect = 9.072e-24 Identity = 69/254 (27.17%), Postives = 118/254 (46.46%), Query Frame = -2 Query: 688 IFDQMVEKDLVSWSAMISGYAESDQPQEALRLFKELQILGIRPDQVTMLSVISACANLGVLDKAKWIHVYADKNGFGGSLRINNALIDMYAKCGSLERARNVFEKMTSRNVISWT-------------------------------GMINAFAIHGDANNALRYFQKMKEARVEPNGVTFVGVLYACSHAGLVEDGRKIFASMINEHNITPKHEHYGCMVDLLGRANLLREAVEIVETMPFAPNVVIWGSLMSA 1356 +F + E +L+ W+ M G+A S P AL+L+ + LG+ P+ T V+ +CA + + IH + K G L ++ +LI MY + G LE A VF+K R+V+S+T MI+ +A G+ AL F+ M + V P+ T V V+ AC+ +G +E GR++ I++H + ++DL + L A + E +P+ +V+ W +L+ Sbjct: 90 VFKTIQEPNLLIWNTMFRGHALSSDPVSALKLYVCMISLGLLPNSYTFPFVLKSCAKSKAFKEGQQIHGHVLKLGCDLDLYVHTSLISMYVQNGRLEDAHKVFDKSPHRDVVSYTALIKGYASRGYIENAQKLFDEIPVKDVVSWNAMISGYAETGNYKEALELFKDMMKTNVRPDESTMVTVVSACAQSGSIELGRQVHL-WIDDHGFGSNLKIVNALIDLYSKCGELETACGLFERLPYK-DVISWNTLIGG 341
BLAST of g.arboreum_cottongen_reftransV1_0010582 vs. ExPASy Swiss-Prot
Match: PP341_ARATH (Pentatricopeptide repeat-containing protein At4g30700 OS=Arabidopsis thaliana GN=DYW9 PE=2 SV=1) HSP 1 Score: 412.149 bits (1058), Expect = 6.092e-134 Identity = 190/419 (45.35%), Postives = 273/419 (65.16%), Query Frame = -2 Query: 106 RLIFDQMVEKDLVSWSAMISGYAESDQPQEALRLFKELQILGIRPDQVTMLSVISACANLGVLDKAKWIHVYADKNGFGGSLRINNALIDMYAKCGSLERARNVFEKMTSRNVISWTGMINAFAIHGDANNALRYFQKMKEARVEPNGVTFVGVLYACSHAGLVEDGRKIFASMINEHNITPKHEHYGCMVDLLGRANLLREAVEIVETMPFAPNVVIWGSLMSACQIHGETELGEFTAKRVLELEPDHDGALVLLSNIYAKERKWQNVGDLRQLMKERGISKERGYSRIELNNEVHEFLVADRNHKQAYEIYEKLNEVVSRLKLDGYAPNTGCVLVDLEEEEKREVVLWHSEKLALCYGLINGAKDSCIRIVKNLRVCEDCHTFLKLVSKVYRREIIVRDRTRFHHYRDGVCSCRDYW 1362 R +FD+ EK L SW+AMISGY ++ ++A+ LF+E+Q P+ VT+ ++SACA LG L KW+H F S+ ++ ALI MYAKCGS+ AR +F+ MT +N ++W MI+ + +HG AL F +M + + P VTF+ VLYACSHAGLV++G +IF SMI+ + P +HY CMVD+LGRA L+ A++ +E M P +W +L+ AC+IH +T L ++++ EL+PD+ G VLLSNI++ +R + +RQ K+R ++K GY+ IE+ H F D++H Q EIYEKL ++ +++ GY P T L D+EEEE+ +V HSE+LA+ +GLI + IRI+KNLRVC DCHT KL+SK+ R I+VRD RFHH++DGVCSC DYW Sbjct: 374 RKLFDESPEKSLPSWNAMISGYTQNGLTEDAISLFREMQKSEFSPNPVTITCILSACAQLGALSLGKWVHDLVRSTDFESSIYVSTALIGMYAKCGSIAEARRLFDLMTKKNEVTWNTMISGYGLHGQGQEALNIFYEMLNSGITPTPVTFLCVLYACSHAGLVKEGDEIFNSMIHRYGFEPSVKHYACMVDILGRAGHLQRALQFIEAMSIEPGSSVWETLLGACRIHKDTNLARTVSEKLFELDPDNVGYHVLLSNIHSADRNYPQAATVRQTAKKRKLAKAPGYTLIEIGETPHVFTSGDQSHPQVKEIYEKLEKLEGKMREAGYQPETELALHDVEEEERELMVKVHSERLAIAFGLIATEPGTEIRIIKNLRVCLDCHTVTKLISKITERVIVVRDANRFHHFKDGVCSCGDYW 792 HSP 2 Score: 104.76 bits (260), Expect = 1.165e-22 Identity = 58/231 (25.11%), Postives = 120/231 (51.95%), Query Frame = -2 Query: 664 IFDQMVEKDLVSWSAMISGYAESDQPQEALRLFKELQILGIRPDQVTMLSVISACANLGVLDKAKWIHVYADKNGFGGSLRINNALIDMYAKCGSLERARNVFEKMTSRNVISWTGMINAFAIHGDANNALRYFQKMKEARVEPNGVTFVGVLYACSHAGLVEDGRKIFASMINEHNITPKHEHYGCMVDLLGRANLLREAVEIVETMPFAPNVVIWGSLMSACQIHGETE 1356 +F + + D+V+++AMI GY + + + +L LFKEL + G R T++S++ +L ++ IH Y K+ F ++ AL +Y+K +E AR +F++ +++ SW MI+ + +G +A+ F++M+++ PN VT +L AC+ G + G+ + ++ + ++ + + + EA + + M N V W +++S +HG+ + Sbjct: 278 LFREFRKPDIVAYNAMIHGYTSNGETELSLSLFKELMLSGARLRSSTLVSLVPVSGHLMLIYA---IHGYCLKSNFLSHASVSTALTTVYSKLNEIESARKLFDESPEKSLPSWNAMISGYTQNGLTEDAISLFREMQKSEFSPNPVTITCILSACAQLGALSLGKWVH-DLVRSTDFESSIYVSTALIGMYAKCGSIAEARRLFDLMT-KKNEVTWNTMISGYGLHGQGQ 503 HSP 3 Score: 86.2705 bits (212), Expect = 1.404e-16 Identity = 70/312 (22.44%), Postives = 135/312 (43.27%), Query Frame = -2 Query: 535 RLIFDQMVEKDLVSWSAMISGYAESDQPQEALRLFKEL-QILGIRPDQVTMLSVISACANLGVLDKAKWIHVYADKNGFGGSLRINNALIDMYAKCGSLERARNVFEKMTSRNVISWTGMINAFAIHGDANNALRYFQKMKEARVEPNGVTFVG---------VLYAC----------SHAGL-------------VEDGRKIFASMINEHNITPKHEHYGCMVDLLGRANLLREAVEIVETMP---FAPNVVIWGSLMSACQIHGETELGEFTAKRVLELEPDHDGALVLLSNIYAKERKWQNVGDLRQLM 1362 R +FD+M EKD + W+ MISGY +++ E++++F++L R D T+L ++ A A L L IH A K G + I +Y+KCG ++ +F + +++++ MI+ + +G+ +L F+++ + T V ++YA SHA + +E RK+F + + + M+ + L +A+ + M F+PN V ++SAC G LG++ V D + ++ + + + K ++ + R+L Sbjct: 174 RKVFDRMPEKDTILWNTMISGYRKNEMYVESIQVFRDLINESCTRLDTTTLLDILPAVAELQELRLGMQIHSLATKTGCYSHDYVLTGFISLYSKCGKIKMGSALFREFRKPDIVAYNAMIHGYTSNGETELSLSLFKELMLSGARLRSSTLVSLVPVSGHLMLIYAIHGYCLKSNFLSHASVSTALTTVYSKLNEIESARKLF-----DESPEKSLPSWNAMISGYTQNGLTEDAISLFREMQKSEFSPNPVTITCILSACAQLGALSLGKWVHDLV--RSTDFESSIYVSTALIGMYAKCGSIAEARRLF 478 HSP 4 Score: 58.9214 bits (141), Expect = 6.326e-8 Identity = 54/242 (22.31%), Postives = 111/242 (45.87%), Query Frame = -2 Query: 658 RLIFDQMVEKDLVSWSAMISGYAESDQPQEALRLFKEL-QILGIRPDQVTMLSVISACANLGVLDKAKWIHVYADKNGFGGSLRINNALIDMYAKCGSLERARNVFEKMTSRNVISWTGMINAFAIHGDANNALRYFQKM-KEARVEPNGVTFVGVLYACSHAGLVEDGRKIFASMINEHNITPKHEHYGCMVDLLGRANLLREAVEI-VETMPF----APNVVIWGSLMSACQIHGETELG 1362 R IF + D+ ++ ++ G++ ++ P +L +F L + ++P+ T ISA + + IH A +G L + + ++ MY K +E AR VF++M ++ I W MI+ + + +++ F+ + E+ + T + +L A + + G +I H++ K Y L G +L + +I + + F P++V + +++ +GETEL Sbjct: 72 RDIFLSVQRPDVFLFNVLMRGFSVNESPHSSLSVFAHLRKSTDLKPNSSTYAFAISAASGFRDDRAGRVIHGQAVVDGCDSELLLGSNIVKMYFKFWRVEDARKVFDRMPEKDTILWNTMISGYRKNEMYVESIQVFRDLINESCTRLDTTTLLDILPAVAELQELRLGMQI-------HSLATKTGCYSHDYVLTGFISLYSKCGKIKMGSALFREFRKPDIVAYNAMIHGYTSNGETELS 306 The following BLAST results are available for this feature:
BLAST of g.arboreum_cottongen_reftransV1_0010582 vs. ExPASy TrEMBL
Analysis Date: 2016-11-15 (Homology Analysis for Gossypium arboreum CottonGen RefTrans V1 vs TrEMBL) Total hits: 25
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BLAST of g.arboreum_cottongen_reftransV1_0010582 vs. ExPASy Swiss-Prot
Analysis Date: 2016-11-15 (Homology Analysis for Gossypium arboreum CottonGen RefTrans V1 vs SwissProt) Total hits: 25
Pagesback to topInterPro
Analysis Name: InterProScan analysis for Gossypium arboreum CottonGen RefTrans V1
Date Performed: 2016-11-14
Sequences
The
following sequences are available for this feature:
contig sequence >g.arboreum_cottongen_reftransV1_0010582 ID=g.arboreum_cottongen_reftransV1_0010582; Name=g.arboreum_cottongen_reftransV1_0010582; organism=Gossypium arboreum; type=contig; length=1363bpback to top |