g.arboreum_cottongen_reftransV1_0006676, g.arboreum_cottongen_reftransV1_0006676 (contig) Gossypium arboreum

Overview


Name	g.arboreum_cottongen_reftransV1_0006676
Unique Name	g.arboreum_cottongen_reftransV1_0006676
Type	contig
Organism	Gossypium arboreum (Tree cotton)
Sequence length	589

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
Chr1	chromosome	g.arboreum_cottongen_reftransV1_0006676:1..589 . Chr1:49536637..49537643 -

Analyses

This contig is derived from or has results from the following analyses


Analysis Name	Date Performed
Gossypium arboreum CottonGen RefTrans V1	2016-11-14
InterProScan analysis for Gossypium arboreum CottonGen RefTrans V1	2016-11-14
Homology Analysis for Gossypium arboreum CottonGen RefTrans V1 vs TrEMBL	2016-11-15
Homology Analysis for Gossypium arboreum CottonGen RefTrans V1 vs SwissProt	2016-11-15

Homology

[Close]

BLAST of g.arboreum_cottongen_reftransV1_0006676 vs. ExPASy TrEMBL
Match: A0A0B0MXZ7_GOSAR (Uncharacterized protein OS=Gossypium arboreum GN=F383_33282 PE=4 SV=1)

HSP 1 Score: 263.077 bits (671), Expect = 1.750e-82
Identity = 172/172 (100.00%), Postives = 172/172 (100.00%), Query Frame = 1

Query:   73 CTFENIVVLAVQGPAXXXXXXXXXXXMAAFSPAGIQLGGEEHKKMDPTKKMXXXXXXXXXXXXXXXXXXFCLWIYYRXXXXXXXXXXXXXXDGEKGNGLAPYLGKLKSMRTVSKEGYASFMDYKILEKATNKFHHGNILGEGGFGCVYKAQFNDGSYAAVKKLDCASQDAEK 588
            CTFENIVVLAVQGPASSPISTPISTSMAAFSPAGIQLGGEEHKKMDPTKKMLLALILAGSSLGAIISSLFCLWIYYRKNSSKSSKNGAKSSDGEKGNGLAPYLGKLKSMRTVSKEGYASFMDYKILEKATNKFHHGNILGEGGFGCVYKAQFNDGSYAAVKKLDCASQDAEK
Sbjct:   15 CTFENIVVLAVQGPASSPISTPISTSMAAFSPAGIQLGGEEHKKMDPTKKMLLALILAGSSLGAIISSLFCLWIYYRKNSSKSSKNGAKSSDGEKGNGLAPYLGKLKSMRTVSKEGYASFMDYKILEKATNKFHHGNILGEGGFGCVYKAQFNDGSYAAVKKLDCASQDAEK 186

[Close]

BLAST of g.arboreum_cottongen_reftransV1_0006676 vs. ExPASy TrEMBL
Match: A0A0D2LUC0_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_001G036400 PE=4 SV=1)

HSP 1 Score: 247.284 bits (630), Expect = 7.290e-77
Identity = 165/172 (95.93%), Postives = 166/172 (96.51%), Query Frame = 1

Query:   73 CTFENIVVLAVQGPAXXXXXXXXXXXMAAFSPAGIQLGGEEHKKMDPTKKMXXXXXXXXXXXXXXXXXXFCLWIYYRXXXXXXXXXXXXXXDGEKGNGLAPYLGKLKSMRTVSKEGYASFMDYKILEKATNKFHHGNILGEGGFGCVYKAQFNDGSYAAVKKLDCASQDAEK 588
            C  ENIV LAVQGPASSPISTPIS SMAAFSPAGIQLGGEEHKKMDPTKKMLLALILA SSLGAIISSLFCLWIYYRKNSSKSSKNGAKSSDGEKGNGLAPYLGK KSMRTVSKEGYASFMDYKILEKATNKFHHGNILGEGGFGCVYKA+FNDGSYAAVKKLDCASQDAEK
Sbjct:   15 CALENIV-LAVQGPASSPISTPISASMAAFSPAGIQLGGEEHKKMDPTKKMLLALILACSSLGAIISSLFCLWIYYRKNSSKSSKNGAKSSDGEKGNGLAPYLGKFKSMRTVSKEGYASFMDYKILEKATNKFHHGNILGEGGFGCVYKAEFNDGSYAAVKKLDCASQDAEK 185

[Close]

BLAST of g.arboreum_cottongen_reftransV1_0006676 vs. ExPASy TrEMBL
Match: A0A0D2PU78_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_001G036400 PE=4 SV=1)

HSP 1 Score: 248.44 bits (633), Expect = 8.243e-77
Identity = 165/172 (95.93%), Postives = 166/172 (96.51%), Query Frame = 1

Query:   73 CTFENIVVLAVQGPAXXXXXXXXXXXMAAFSPAGIQLGGEEHKKMDPTKKMXXXXXXXXXXXXXXXXXXFCLWIYYRXXXXXXXXXXXXXXDGEKGNGLAPYLGKLKSMRTVSKEGYASFMDYKILEKATNKFHHGNILGEGGFGCVYKAQFNDGSYAAVKKLDCASQDAEK 588
            C  ENIV LAVQGPASSPISTPIS SMAAFSPAGIQLGGEEHKKMDPTKKMLLALILA SSLGAIISSLFCLWIYYRKNSSKSSKNGAKSSDGEKGNGLAPYLGK KSMRTVSKEGYASFMDYKILEKATNKFHHGNILGEGGFGCVYKA+FNDGSYAAVKKLDCASQDAEK
Sbjct:   15 CALENIV-LAVQGPASSPISTPISASMAAFSPAGIQLGGEEHKKMDPTKKMLLALILACSSLGAIISSLFCLWIYYRKNSSKSSKNGAKSSDGEKGNGLAPYLGKFKSMRTVSKEGYASFMDYKILEKATNKFHHGNILGEGGFGCVYKAEFNDGSYAAVKKLDCASQDAEK 185

[Close]

BLAST of g.arboreum_cottongen_reftransV1_0006676 vs. ExPASy TrEMBL
Match: A0A061GQG8_THECC (Kinase superfamily protein OS=Theobroma cacao GN=TCM_036937 PE=3 SV=1)

HSP 1 Score: 189.504 bits (480), Expect = 3.946e-54
Identity = 122/146 (83.56%), Postives = 128/146 (87.67%), Query Frame = 1

Query:  151 MAAFSPAGIQLGGEEHKKMDPTKKMXXXXXXXXXXXXXXXXXXFCLWIYYRXXXXXXXXXXXXXXDGEKGNGLAPYLGKLKSMRTVSKEGYASFMDYKILEKATNKFHHGNILGEGGFGCVYKAQFNDGSYAAVKKLDCASQDAEK 588
            M AFSP GIQ+G EEHKKMDP KKM +ALILA SSLGAIISSL CLWIY RKNS KS KN AKSSD EKGN LAP+ GK KS+RTVSKEG ASFMDYKILEKAT+KFH GNILGEGGFGCVYKAQF+DGSYAAVKKLDCAS DAEK
Sbjct:   40 MTAFSP-GIQVGSEEHKKMDPPKKMFIALILACSSLGAIISSLCCLWIYCRKNSPKSKKNDAKSSDAEKGNRLAPFFGKFKSIRTVSKEGDASFMDYKILEKATSKFHQGNILGEGGFGCVYKAQFDDGSYAAVKKLDCASHDAEK 184

[Close]

BLAST of g.arboreum_cottongen_reftransV1_0006676 vs. ExPASy TrEMBL
Match: A0A0B0PTB8_GOSAR (Uncharacterized protein OS=Gossypium arboreum GN=F383_33408 PE=4 SV=1)

HSP 1 Score: 182.57 bits (462), Expect = 2.030e-51
Identity = 123/180 (68.33%), Postives = 146/180 (81.11%), Query Frame = 1

Query:   70 VCTFENIVVLAVQGP-------AXXXXXXXXXXXMAAFSPAGIQLGGEEHKKMDPTKKMXXXXXXXXXXXXXXXXXXFCLWIYYRXXXXXXXXXXXXXXDGEKGNGLAPYLGKLKSMRTVSKEGYASFMDYKILEKATNKFHHGNILGEGGFGCVYKAQFNDGSYAAVKKLDCASQDAEK 588
            + T EN++V+AVQGP        SSP S+PIS S++AFSP G QLG EEH K DP  KML+A+I+   SLGAII SLFCLWIYYRKNS KS+ N AK+SD EKG+GLAP+ GK K+ RTVSKEG ASFM+YK LEK+TNKFH GNILGEGGFGCVYKAQF+ GS+AAVKKL+CA+QDA++
Sbjct:   15 IFTHENMIVVAVQGPLASSLSPVSSPFSSPISASVSAFSP-GFQLGSEEHTKKDPPNKMLIAIIIGCCSLGAIICSLFCLWIYYRKNSPKSTTNDAKNSDAEKGSGLAPFFGKFKATRTVSKEGSASFMEYKTLEKSTNKFHQGNILGEGGFGCVYKAQFDVGSFAAVKKLNCANQDAKR 193

[Close]

BLAST of g.arboreum_cottongen_reftransV1_0006676 vs. ExPASy TrEMBL
Match: A0A0D2UH45_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_009G060300 PE=4 SV=1)

HSP 1 Score: 178.718 bits (452), Expect = 5.692e-50
Identity = 122/180 (67.78%), Postives = 144/180 (80.00%), Query Frame = 1

Query:   70 VCTFENIVVLAVQGP-------AXXXXXXXXXXXMAAFSPAGIQLGGEEHKKMDPTKKMXXXXXXXXXXXXXXXXXXFCLWIYYRXXXXXXXXXXXXXXDGEKGNGLAPYLGKLKSMRTVSKEGYASFMDYKILEKATNKFHHGNILGEGGFGCVYKAQFNDGSYAAVKKLDCASQDAEK 588
            + T EN++V+AV GP        SSP S+PIS SM+AFSP G QLG EEH K DP  KML+A+I+   SLGAII SLFCLWIYYRKNS KS+ N AK+SD EKG+GLAP+ GK K+ RTVSKEG ASFM+YK LEK+TNKFH  NILGEGGFGCVYKAQF+ GS+AAVKKL+CA+QDA++
Sbjct:   15 IFTHENMIVVAVPGPLASSLSPVSSPFSSPISASMSAFSP-GFQLGSEEHTKKDPPNKMLIAIIIGCCSLGAIICSLFCLWIYYRKNSHKSTTNDAKNSDAEKGSGLAPFFGKFKATRTVSKEGSASFMEYKTLEKSTNKFHQCNILGEGGFGCVYKAQFDVGSFAAVKKLNCANQDAKR 193

[Close]

BLAST of g.arboreum_cottongen_reftransV1_0006676 vs. ExPASy TrEMBL
Match: A0A0D2RUY2_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_009G060300 PE=4 SV=1)

HSP 1 Score: 178.718 bits (452), Expect = 5.701e-50
Identity = 122/180 (67.78%), Postives = 144/180 (80.00%), Query Frame = 1

Query:   70 VCTFENIVVLAVQGP-------AXXXXXXXXXXXMAAFSPAGIQLGGEEHKKMDPTKKMXXXXXXXXXXXXXXXXXXFCLWIYYRXXXXXXXXXXXXXXDGEKGNGLAPYLGKLKSMRTVSKEGYASFMDYKILEKATNKFHHGNILGEGGFGCVYKAQFNDGSYAAVKKLDCASQDAEK 588
            + T EN++V+AV GP        SSP S+PIS SM+AFSP G QLG EEH K DP  KML+A+I+   SLGAII SLFCLWIYYRKNS KS+ N AK+SD EKG+GLAP+ GK K+ RTVSKEG ASFM+YK LEK+TNKFH  NILGEGGFGCVYKAQF+ GS+AAVKKL+CA+QDA++
Sbjct:   15 IFTHENMIVVAVPGPLASSLSPVSSPFSSPISASMSAFSP-GFQLGSEEHTKKDPPNKMLIAIIIGCCSLGAIICSLFCLWIYYRKNSHKSTTNDAKNSDAEKGSGLAPFFGKFKATRTVSKEGSASFMEYKTLEKSTNKFHQCNILGEGGFGCVYKAQFDVGSFAAVKKLNCANQDAKR 193

[Close]

BLAST of g.arboreum_cottongen_reftransV1_0006676 vs. ExPASy TrEMBL
Match: A0A0D2TEH0_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_009G060300 PE=4 SV=1)

HSP 1 Score: 177.563 bits (449), Expect = 1.352e-49
Identity = 122/180 (67.78%), Postives = 144/180 (80.00%), Query Frame = 1

Query:   70 VCTFENIVVLAVQGP-------AXXXXXXXXXXXMAAFSPAGIQLGGEEHKKMDPTKKMXXXXXXXXXXXXXXXXXXFCLWIYYRXXXXXXXXXXXXXXDGEKGNGLAPYLGKLKSMRTVSKEGYASFMDYKILEKATNKFHHGNILGEGGFGCVYKAQFNDGSYAAVKKLDCASQDAEK 588
            + T EN++V+AV GP        SSP S+PIS SM+AFSP G QLG EEH K DP  KML+A+I+   SLGAII SLFCLWIYYRKNS KS+ N AK+SD EKG+GLAP+ GK K+ RTVSKEG ASFM+YK LEK+TNKFH  NILGEGGFGCVYKAQF+ GS+AAVKKL+CA+QDA++
Sbjct:   15 IFTHENMIVVAVPGPLASSLSPVSSPFSSPISASMSAFSP-GFQLGSEEHTKKDPPNKMLIAIIIGCCSLGAIICSLFCLWIYYRKNSHKSTTNDAKNSDAEKGSGLAPFFGKFKATRTVSKEGSASFMEYKTLEKSTNKFHQCNILGEGGFGCVYKAQFDVGSFAAVKKLNCANQDAKR 193

[Close]

BLAST of g.arboreum_cottongen_reftransV1_0006676 vs. ExPASy TrEMBL
Match: A0A067E7A9_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g012975mg PE=3 SV=1)

HSP 1 Score: 114.005 bits (284), Expect = 1.181e-26
Identity = 88/147 (59.86%), Postives = 109/147 (74.15%), Query Frame = 1

Query:  151 MAAFSPAGIQLGGEE--HKKMDPTKKMXXXXXXXXXXXXXXXXXXFCLWIYYRXXXXXXXXXXXXXXDGEKGNGLAPYLGKLKSMRTVSKEGYA-SFMDYKILEKATNKFHHGNILGEGGFGCVYKAQFNDGSYAAVKKLDCASQDA 582
            MAAFSP GIQ+G E+  H  MD   K+L+ALI+A S+L  II +L CLW+Y+ K S KSS   AKS D E G  L+ +LGK  S+R VSK+G A SF++YK+LEKAT+ FH  NILGEGGFGCVYKA+ +D  + AVKKLDCA+QDA
Sbjct:   45 MAAFSP-GIQMGSEDPHHHHMDAHHKLLIALIIACSALCLIILALLCLWLYHLKYSFKSSNKNAKSKDSENGVVLSSFLGKFTSVRMVSKKGSAISFIEYKLLEKATDSFHESNILGEGGFGCVYKAKLDDNLHVAVKKLDCATQDA 190

[Close]

BLAST of g.arboreum_cottongen_reftransV1_0006676 vs. ExPASy TrEMBL
Match: A0A067E6D9_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g012975mg PE=3 SV=1)

HSP 1 Score: 113.62 bits (283), Expect = 1.474e-26
Identity = 88/147 (59.86%), Postives = 109/147 (74.15%), Query Frame = 1

Query:  151 MAAFSPAGIQLGGEE--HKKMDPTKKMXXXXXXXXXXXXXXXXXXFCLWIYYRXXXXXXXXXXXXXXDGEKGNGLAPYLGKLKSMRTVSKEGYA-SFMDYKILEKATNKFHHGNILGEGGFGCVYKAQFNDGSYAAVKKLDCASQDA 582
            MAAFSP GIQ+G E+  H  MD   K+L+ALI+A S+L  II +L CLW+Y+ K S KSS   AKS D E G  L+ +LGK  S+R VSK+G A SF++YK+LEKAT+ FH  NILGEGGFGCVYKA+ +D  + AVKKLDCA+QDA
Sbjct:   45 MAAFSP-GIQMGSEDPHHHHMDAHHKLLIALIIACSALCLIILALLCLWLYHLKYSFKSSNKNAKSKDSENGVVLSSFLGKFTSVRMVSKKGSAISFIEYKLLEKATDSFHESNILGEGGFGCVYKAKLDDNLHVAVKKLDCATQDA 190

[Close]

BLAST of g.arboreum_cottongen_reftransV1_0006676 vs. ExPASy Swiss-Prot
Match: SRF7_ARATH (Protein STRUBBELIG-RECEPTOR FAMILY 7 OS=Arabidopsis thaliana GN=SRF7 PE=1 SV=1)

HSP 1 Score: 51.9878 bits (123), Expect = 7.792e-7
Identity = 24/42 (57.14%), Postives = 30/42 (71.43%), Query Frame = 1

Query:  448 LEKATNKFHHGNILGEGGFGCVYKAQFNDGSYAAVKKLDCAS 573
            L+ ATN F   N+LGEG FG VY+AQF DG   AVKK+D ++
Sbjct:  412 LQVATNSFSVDNLLGEGTFGRVYRAQFEDGKVLAVKKIDSSA 453

[Close]

BLAST of g.arboreum_cottongen_reftransV1_0006676 vs. ExPASy Swiss-Prot
Match: CRK5_ARATH (Cysteine-rich receptor-like protein kinase 5 OS=Arabidopsis thaliana GN=CRK5 PE=1 SV=1)

HSP 1 Score: 51.9878 bits (123), Expect = 9.840e-7
Identity = 25/51 (49.02%), Postives = 32/51 (62.75%), Query Frame = 1

Query:  436 DYKILEKATNKFHHGNILGEGGFGCVYKAQFNDGSYAAVKKLDCASQDAEK 588
            D+K++E AT+KF   N LG+GGFG VYK    +G   AVK+L   S   EK
Sbjct:  329 DFKVIEAATDKFSMCNKLGQGGFGQVYKGTLPNGVQVAVKRLSKTSGQGEK 379

The following BLAST results are available for this feature:

BLAST of g.arboreum_cottongen_reftransV1_0006676 vs. ExPASy TrEMBL
BLAST of g.arboreum_cottongen_reftransV1_0006676 vs. ExPASy Swiss-Prot

BLAST of g.arboreum_cottongen_reftransV1_0006676 vs. ExPASy TrEMBL
Analysis Date: 2016-11-15 (Homology Analysis for Gossypium arboreum CottonGen RefTrans V1 vs TrEMBL)
Total hits: 25


Match Name	E-value	Identity	Description
A0A0B0MXZ7_GOSAR	1.750e-82	100.00	Uncharacterized protein OS=Gossypium arboreum GN=F...	[more]
A0A0D2LUC0_GOSRA	7.290e-77	95.93	Uncharacterized protein OS=Gossypium raimondii GN=...	[more]
A0A0D2PU78_GOSRA	8.243e-77	95.93	Uncharacterized protein OS=Gossypium raimondii GN=...	[more]
A0A061GQG8_THECC	3.946e-54	83.56	Kinase superfamily protein OS=Theobroma cacao GN=T...	[more]
A0A0B0PTB8_GOSAR	2.030e-51	68.33	Uncharacterized protein OS=Gossypium arboreum GN=F...	[more]
A0A0D2UH45_GOSRA	5.692e-50	67.78	Uncharacterized protein OS=Gossypium raimondii GN=...	[more]
A0A0D2RUY2_GOSRA	5.701e-50	67.78	Uncharacterized protein OS=Gossypium raimondii GN=...	[more]
A0A0D2TEH0_GOSRA	1.352e-49	67.78	Uncharacterized protein OS=Gossypium raimondii GN=...	[more]
A0A067E7A9_CITSI	1.181e-26	59.86	Uncharacterized protein OS=Citrus sinensis GN=CISI...	[more]
A0A067E6D9_CITSI	1.474e-26	59.86	Uncharacterized protein OS=Citrus sinensis GN=CISI...	[more]

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BLAST of g.arboreum_cottongen_reftransV1_0006676 vs. ExPASy Swiss-Prot
Analysis Date: 2016-11-15 (Homology Analysis for Gossypium arboreum CottonGen RefTrans V1 vs SwissProt)
Total hits: 22


Match Name	E-value	Identity	Description
SRF7_ARATH	7.792e-7	57.14	Protein STRUBBELIG-RECEPTOR FAMILY 7 OS=Arabidopsi...	[more]
CRK5_ARATH	9.840e-7	49.02	Cysteine-rich receptor-like protein kinase 5 OS=Ar...	[more]

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InterPro

Analysis Name: InterProScan analysis for Gossypium arboreum CottonGen RefTrans V1
Date Performed: 2016-11-14


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR013320	Concanavalin A-like lectin/glucanase domain	GENE3D	2.60.120.200		coord: 59..167 e-value: 7.2E-10 score: 38.3
None	No IPR available	GENE3D	3.30.200.20		coord: 168..191 e-value: 6.2E-6 score: 25.9
None	No IPR available	PANTHER	PTHR27001:SF62	PROTEIN KINASE FAMILY PROTEIN-RELATED	coord: 35..103 coord: 121..193
None	No IPR available	PANTHER	PTHR27001	FAMILY NOT NAMED	coord: 35..103 coord: 121..193
None	No IPR available	PHOBIUS	CYTOPLASMIC_DOMAIN	Cytoplasmic domain	coord: 98..193
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE_C_REGION	Signal peptide C-region	coord: 24..31
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 72..97
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE_H_REGION	Signal peptide H-region	coord: 12..23
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE	Signal Peptide	coord: 1..31
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE_N_REGION	Signal peptide N-region	coord: 1..11
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 32..71
None	No IPR available	SIGNALP_EUK	SignalP-noTM	SignalP-noTM	coord: 1..31 score: 0.712
None	No IPR available	SIGNALP_GRAM_POSITIVE	SignalP-TM	SignalP-TM	coord: 1..31 score: 0.477
None	No IPR available	TMHMM	TMhelix		coord: 75..97
None	No IPR available	TMHMM	TMhelix		coord: 12..34
IPR017441	Protein kinase, ATP binding site	PROSITE	PS00107	PROTEIN_KINASE_ATP	coord: 160..183
IPR000719	Protein kinase domain	PROSITE	PS50011	PROTEIN_KINASE_DOM	coord: 154..193 score: 8.556
IPR011009	Protein kinase-like domain	SUPERFAMILY	56112	Protein kinase-like (PK-like)	coord: 133..185

Sequences

The following sequences are available for this feature:

contig sequence

contig sequence

>g.arboreum_cottongen_reftransV1_0006676 ID=g.arboreum_cottongen_reftransV1_0006676; Name=g.arboreum_cottongen_reftransV1_0006676; organism=Gossypium arboreum; type=contig; length=589bp
AAAGAATCATTGTTTGAAAGAAACAAAGGGATGAAGAAGAAGCTTGTGCT
GCATCTGCTTCTTTTCCTTGTTTGTACTTTTGAAAACATTGTTGTTTTGG
CCGTACAAGGCCCTGCTTCATCACCCATTTCTACTCCCATCTCTACTTCA
ATGGCTGCCTTCTCTCCAGCTGGGATTCAACTTGGAGGTGAGGAGCACAA
GAAAATGGATCCAACCAAGAAAATGTTATTAGCTCTCATTCTTGCTGGCT
CTTCATTGGGTGCAATTATCTCTTCCTTGTTCTGTTTATGGATTTATTAC
AGGAAGAATTCAAGCAAATCCTCTAAAAATGGTGCTAAGAGCTCAGATGG
TGAAAAAGGGAATGGTTTGGCACCATATTTGGGTAAACTCAAGTCTATGA
GGACGGTTTCCAAAGAGGGTTATGCTTCGTTTATGGACTATAAGATACTT
GAAAAAGCTACAAACAAGTTCCATCATGGTAATATTCTGGGTGAGGGTGG
ATTTGGATGTGTTTACAAGGCTCAATTCAATGATGGTTCTTATGCTGCTG
TTAAGAAGTTGGACTGTGCAAGCCAAGATGCTGAAAAAG

Annotated Terms

The following terms have been associated with this contig:

Vocabulary: **INTERPRO**
Term	Definition
IPR013320	ConA-like_dom_sf
IPR017441	Protein_kinase_ATP_BS
IPR000719	Prot_kinase_dom
IPR011009	Kinase-like_dom_sf

Vocabulary: **Molecular Function**
Term	Definition
GO:0005524	ATP binding
GO:0004672	protein kinase activity

Vocabulary: **Biological Process**
Term	Definition
GO:0006468	protein phosphorylation

Search form

g.arboreum_cottongen_reftransV1_0006676, g.arboreum_cottongen_reftransV1_0006676 (contig) Gossypium arboreum

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