g.arboreum_cottongen_reftransV1_0018556, g.arboreum_cottongen_reftransV1_0018556 (contig) Gossypium arboreum
Overview
Alignments
The following features are aligned
Analyses
This contig is derived from or has results from the following analyses
Homology
BLAST of g.arboreum_cottongen_reftransV1_0018556 vs. ExPASy TrEMBL
Match: F6HQ13_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_07s0104g01360 PE=4 SV=1) HSP 1 Score: 273.478 bits (698), Expect = 2.348e-82 Identity = 170/350 (48.57%), Postives = 216/350 (61.71%), Query Frame = -2 Query: 640 SLSQEKHSLANQLFSKHSRSQLCDACDGSPASIFCETEQSVFCSNCDWESHKFSSSSLHNRRPIEGFTGCPSVNELVSIVGIEDLGEKK----------------XXXXXXXXXXXXXXLSWENPVIXXXXXXXXXXXXDHGFKPTDVLPLPKNRNAHCGQHKEEVLHQLRELAKSEPILSFDNTGD---------------LQTGTVHTSCTNDTAPIPFPAYESSALRFFGDNVEMTDQVFVPFSELRGHPEECAVVPDKH--LGSSRTIPVSDSLGNQQHQIDTGTVSALPKVAVHELNSQERDSAISRYKEKRKTRRFDKHIRYESRKVRAESRTRIKGRFAKVEH 1590 S +E HS NQLF+KH+RS+LCD CD SPASI C T+ V C NCDW H S SS H+RRP+EGF+G PSV EL++ VG EDLG+K + G D+ + D L W+ P + + DDL+VS+ DH F+ V PLPKNR A CGQHK E++HQLR+LAK E FD+ GD +Q SC ++ + FP YE+SA ++ D E +QV +P L +E +VP KH +G S + G + + T T+ ALPKV+VHELNSQERDSAISRYKEK+KTRR++KHIRYESRK RAESR RIKGRFAK++H Sbjct: 49 SCDREVHS-TNQLFTKHTRSRLCDVCDASPASILCSTDNLVLCQNCDWAKHGRSLSSAHDRRPLEGFSGQPSVTELLAFVGFEDLGKKSLFCGDESEVNEFLGCGVYESVGVDEEFSDFLVWDTPAVVNLDDLIVSTACDHNFQAMGVPPLPKNRGAPCGQHKAEIIHQLRQLAKIELSFDFDH-GDAKPPIGFQSHIPKQLIQKENECNSCDHEVEFV-FPTYEASAFQWCSDGSEAANQV-LPSVLLGSCADEKCLVPRKHSDIGGSVSHTNGSDEGKSECPVVTKTLPALPKVSVHELNSQERDSAISRYKEKKKTRRYEKHIRYESRKARAESRIRIKGRFAKMDH 394
BLAST of g.arboreum_cottongen_reftransV1_0018556 vs. ExPASy TrEMBL
Match: V7D1I4_PHAVU (Uncharacterized protein OS=Phaseolus vulgaris GN=PHAVU_001G203000g PE=4 SV=1) HSP 1 Score: 267.314 bits (682), Expect = 1.510e-80 Identity = 160/328 (48.78%), Postives = 202/328 (61.59%), Query Frame = -2 Query: 640 SLSQEKHSLANQLFSKHSRSQLCDACDGSPASIFCETEQSVFCSNCDWESHKFS-SSSLHNRRPIEGFTGCPSVNELVSIVGIEDLGEKKXXXXXXXXXX----------XXXXLSWENPVIXXXXXXXXXXXXDHGFKPTDVLPLPKNRNAHCGQHKEEVLHQLRELAKSEPILSFDNTGDLQTGTVHTSCTNDTAPIPFPAYESSALRFFGDNVEMTDQVFVPFSELRGHPEECAVVPDKHLGSSRTIPVSDSLGNQQHQIDTGTVSALPKVAVHELNSQERDSAISRYKEKRKTRRFDKHIRYESRKVRAESRTRIKGRFAKVEH 1590 S +E HS NQLFSKH+R+ LCDACD SPA+I C T+ SV C NCDWE H + S SLH RRP+EGFTGCPSV+EL+S+VG DL +K DL W+ P I + DDL+ SS S H F+ +V PLPKNR A CG+H+EE+L QLRELAKSEP+ D +Q G + ++ D P +E + ++VE QV P LR + EE V ++G + T D GN +++ T+ PK A EL SQERDSA+ RYK+K+KTRR+DKHIRYESRKVRAESR R+KGRFAK+E Sbjct: 34 SCDREVHS-TNQLFSKHTRTLLCDACDDSPATILCSTDTSVLCQNCDWEKHNPALSDSLHQRRPLEGFTGCPSVSELLSVVGFGDLSKKSLLSSPQGSAADGFLGCEIEGLSDLFVWDAPSIVTIDDLICSSASSHSFQAMEVPPLPKNRKAACGRHREEILSQLRELAKSEPL---DPEQSVQPGNLSSAFERDVEADIIPYHE-----WHRESVEPMYQVVPPDPSLRTYTEEILVKQSTYVGETHTF--VDKGGNLSISLNSETLPTTPKAAACELTSQERDSALLRYKQKKKTRRYDKHIRYESRKVRAESRVRVKGRFAKMEQ 350
BLAST of g.arboreum_cottongen_reftransV1_0018556 vs. ExPASy TrEMBL
Match: M1AT27_SOLTU (Uncharacterized protein OS=Solanum tuberosum GN=PGSC0003DMG400011378 PE=4 SV=1) HSP 1 Score: 261.536 bits (667), Expect = 6.755e-78 Identity = 164/340 (48.24%), Postives = 206/340 (60.59%), Query Frame = -2 Query: 634 QEKHSLANQLFSKHSRSQLCDACDGSPASIFCETEQSVFCSNCDWESHKFSSSSLHNRRPIEGFTGCPSVNELVSIVGIEDLGEKKXXXXXXXXXXXXXXLSWENPVIXXXXXXXXXXXXDHGFKPTDVLPLPKNRNAHCGQHKEEVLHQLRELAKSEPILSFDNTGDLQTGTVHTSCTNDTAPIP-------------------FPAYESSALRFFGDNVEMTDQVFVPFSELRGHPEECAVVPDKHLGSSRTIPVSDSLGNQQHQID-----TGTVSALPKVAVHELNSQERDSAISRYKEKRKTRRFDKHIRYESRKVRAESRTRIKGRFAKVEH*D 1581 +E HS NQLF+KH+R LC+ CD SPASI C TE SV C NCDWESH SLH RRP+EGF+GCPSV+EL+SI+G EDLG+K+ G+ D + W+ P + S DDL+ ++DS+H F+ V PLPKNRNA CG+HKEE+L QLREL+K EP N+GD Q TV T P+ P+ E SA + GD E DQ F S L + K L +R V D+ G + T T +PKV ELNSQER++A+SRYKEK+KTRR++KHIRYESRK RAE+RTRIKGRFAK+++ D Sbjct: 49 REVHS-TNQLFTKHTRWLLCNLCDSSPASILCCTESSVLCQNCDWESHN-KQLSLHERRPLEGFSGCPSVSELLSILGFEDLGKKELLYGGDGSYGFSDWVIWDTPSVVSLDDLIANNDSEHNFQAIGVPPLPKNRNAACGKHKEEILSQLRELSKLEP-----NSGDDQDETVPTIGFQSMEPVQNCPLRFKGLGFMQNSDQHVVPSSEGSAFHWHGDTGEFADQGFS--SSLMD-----CFIETKCLLPNRDSDVCDASGGANEEQSHNPPTTETFQMVPKVVHRELNSQERETAVSRYKEKKKTRRYEKHIRYESRKARAETRTRIKGRFAKMDYRD 374
BLAST of g.arboreum_cottongen_reftransV1_0018556 vs. ExPASy TrEMBL
Match: A0A0B2R8H1_GLYSO (Zinc finger protein CONSTANS-LIKE 13 OS=Glycine soja GN=glysoja_038855 PE=4 SV=1) HSP 1 Score: 259.225 bits (661), Expect = 1.730e-77 Identity = 161/330 (48.79%), Postives = 202/330 (61.21%), Query Frame = -2 Query: 640 SLSQEKHSLANQLFSKHSRSQLCDACDGSPASIFCETEQSVFCSNCDWESHKFS-SSSLHNRRPIEGFTGCPSVNELVSIVGIEDLGEKKXXXXXXXXXXXXXXLS----------WENPVIXXXXXXXXXXXXDHGFKPTDVLPLPKNRNAHCGQHKEEVLHQLRELAKSEPILSFDNTGDLQTGTVHTSCTNDTAPIPFPAYESSALRFFGDNVEMTDQVFVPFSELRGHPEECAVVPDKHLGSS--RTIPVSDSLGNQQHQIDTGTVSALPKVAVHELNSQERDSAISRYKEKRKTRRFDKHIRYESRKVRAESRTRIKGRFAKVEH 1590 S +E HS NQLFSKH+R+ LCDACD SPA+I C T+ SV C NCDWE H + S SLH RRP+EGFTGCPSV+EL+SIVG DL +K W++P + DDL+ SS S H F+ +V PLPKNR A CGQHKEE+L QLRELAKSEP+ D + +G + + + FP++E + ++ E QV P +R + EE +P KH S+ T D+ G + + T+S PK A EL SQERDSA+ RYK+K+KTRRFDKHIRYESRKVRAESR R+KGRFAK+EH Sbjct: 30 SCDREVHS-TNQLFSKHTRTLLCDACDHSPATILCSTDTSVLCQNCDWEKHNPALSDSLHERRPLEGFTGCPSVSELLSIVGFSDLSKKSLLSSPQGSGADGIFGGEIEGLSDLFVWDSPSFVTLDDLISSSPSSHSFQAMEVPPLPKNRKAACGQHKEEILSQLRELAKSEPL---DLEPYVSSGNLSSGFEREPEADIFPSHE-----WHRESSEPMYQVVPPDPLMRTYTEE---IPFKHSTSAVGETQTYGDNGGKPSISLKSETLSTTPKAAACELTSQERDSALLRYKQKKKTRRFDKHIRYESRKVRAESRVRVKGRFAKMEH 347
BLAST of g.arboreum_cottongen_reftransV1_0018556 vs. ExPASy TrEMBL
Match: I1JQH3_SOYBN (CONSTANS-like zinc finger protein OS=Glycine max GN=COL15 PE=2 SV=2) HSP 1 Score: 259.225 bits (661), Expect = 1.730e-77 Identity = 161/330 (48.79%), Postives = 202/330 (61.21%), Query Frame = -2 Query: 640 SLSQEKHSLANQLFSKHSRSQLCDACDGSPASIFCETEQSVFCSNCDWESHKFS-SSSLHNRRPIEGFTGCPSVNELVSIVGIEDLGEKKXXXXXXXXXXXXXXLS----------WENPVIXXXXXXXXXXXXDHGFKPTDVLPLPKNRNAHCGQHKEEVLHQLRELAKSEPILSFDNTGDLQTGTVHTSCTNDTAPIPFPAYESSALRFFGDNVEMTDQVFVPFSELRGHPEECAVVPDKHLGSS--RTIPVSDSLGNQQHQIDTGTVSALPKVAVHELNSQERDSAISRYKEKRKTRRFDKHIRYESRKVRAESRTRIKGRFAKVEH 1590 S +E HS NQLFSKH+R+ LCDACD SPA+I C T+ SV C NCDWE H + S SLH RRP+EGFTGCPSV+EL+SIVG DL +K W++P + DDL+ SS S H F+ +V PLPKNR A CGQHKEE+L QLRELAKSEP+ D + +G + + + FP++E + ++ E QV P +R + EE +P KH S+ T D+ G + + T+S PK A EL SQERDSA+ RYK+K+KTRRFDKHIRYESRKVRAESR R+KGRFAK+EH Sbjct: 30 SCDREVHS-TNQLFSKHTRTLLCDACDHSPATILCSTDTSVLCQNCDWEKHNPALSDSLHERRPLEGFTGCPSVSELLSIVGFSDLSKKSLLSSPQGSGADGIFGGEIEGLSDLFVWDSPSFVTLDDLISSSPSSHSFQAMEVPPLPKNRKAACGQHKEEILSQLRELAKSEPL---DLEPYVSSGNLSSGFEREPEADIFPSHE-----WHRESSEPMYQVVPPDPLMRTYTEE---IPFKHSTSAVGETQTYGDNGGKPSISLKSETLSTTPKAAACELTSQERDSALLRYKQKKKTRRFDKHIRYESRKVRAESRVRVKGRFAKMEH 347
BLAST of g.arboreum_cottongen_reftransV1_0018556 vs. ExPASy TrEMBL
Match: U7E1V5_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0020s00320g PE=4 SV=1) HSP 1 Score: 258.84 bits (660), Expect = 3.792e-77 Identity = 165/341 (48.39%), Postives = 201/341 (58.94%), Query Frame = -2 Query: 640 SLSQEKHSLANQLFSKHSRSQLCDACDGSPASIFCETEQSVFCSNCDWESHKFSSSS-LHNRRPIEGFTGCPSVNELVSIVGIEDLGEKKXXXXXXXXXXXXXXLS---------WENPVIXXXXXXXXXXXXDHGFKPTDVLPLPKNRNAHCGQHKEEVLHQLRELAKSEPILSFDNTGDLQTGTVHTSCTNDTAPIP-----------FPAYESSALRFFGDNVEMTDQVFVPFSELRGHPEECAVVPDKH---LGSSRTIPVSDSLGNQQHQIDTGTVSALPKVAVHELNSQERDSAISRYKEKRKTRRFDKHIRYESRKVRAESRTRIKGRFAKVEH 1590 S E HS NQLFSKH+RS LCDAC SP SIFC+TE SVFC NCDWE H SS S H RRPIEGFTGCPS NEL++I+G EDLG KK DG+L W++P + D ++ S + F+ V PLPKNRNA CGQHKEE+L QLREL + +P D G+ + + D P P F +Y+ + + D E +QV + + EE VPDK +GS+ V D + + T+ ALP V HELNSQERDSAISRYKEK+KTRR+ KHIRYESRKVRAE RTRI+GRFAK++H Sbjct: 33 SCDHEVHS-TNQLFSKHTRSLLCDACHASPVSIFCQTEHSVFCQNCDWERHSLSSLSSTHIRRPIEGFTGCPSGNELMTILGFEDLGLKKSLFFSEESDGFLGSELDDGCSDLFLWDSPAVCIDDLIVSSDSGSN-FQTLGVPPLPKNRNAACGQHKEEILCQLRELVRLKP----DPYGNADIDPANILQSLDADPQPPNLNTIGDPGAFTSYKENLPDWLADYGEAANQVLFLSTLPSSNFEESCAVPDKEFNIIGSASH--VHDDHAAEPQHLTIETLPALPNVVTHELNSQERDSAISRYKEKKKTRRYSKHIRYESRKVRAEGRTRIRGRFAKMDH 365
BLAST of g.arboreum_cottongen_reftransV1_0018556 vs. ExPASy TrEMBL
Match: E9NZT6_PHAVU (CCT motif protein OS=Phaseolus vulgaris PE=4 SV=1) HSP 1 Score: 258.455 bits (659), Expect = 1.230e-76 Identity = 162/362 (44.75%), Postives = 204/362 (56.35%), Query Frame = -2 Query: 640 SLSQEKHSLANQLFSKHSRSQLCDACDGSPASIFCETEQSVFCSNCDWESHKFS-SSSLHNRRPIEGFTGCPSVNELVSIVGIEDLGEKKXXXXXXXXXX----------XXXXLSWENPVIXXXXXXXXXXXXDHGFKPTDVLPLPKNRNAHCGQHKEEVLHQLRELAKSEPILSFDNTGDLQTGTVHTSCTNDTAPIPFPAYESS----------------------------------ALRFFGDNVEMTDQVFVPFSELRGHPEECAVVPDKHLGSSRTIPVSDSLGNQQHQIDTGTVSALPKVAVHELNSQERDSAISRYKEKRKTRRFDKHIRYESRKVRAESRTRIKGRFAKVEH 1590 S +E HS NQLFSKH+R+ LCDACD SPA+I C T+ SV C NCDWE H + S SLH RRP+EGFTGCPSV+EL+S+VG DL +K DL W+ P I + DDL+ SS S H F+ +V PLPKNR A CG+H+EE+L QLRELAKSEP+ D +Q G + ++ D P +ES L + ++VE QV P LR + EE V ++G + T D GN +++ T+ PK A EL SQERDSA+ RYK+K+KTRR+DKHIRYESRKVRAESR R+KGRFAK+E Sbjct: 34 SCDREVHS-TNQLFSKHTRTLLCDACDDSPATILCSTDTSVLCQNCDWEKHNPALSDSLHQRRPLEGFTGCPSVSELLSVVGFGDLSKKSLLSSPQGSAADGFLGCEIEGLSDLFVWDAPSIVTIDDLICSSASSHSFQAMEVPPLPKNRKAACGRHREEILSQLRELAKSEPL---DPEQSVQPGNLSSAFERDVEADIIPYHESMLVLIHDNGSVHKINLGGSTILALILLKGFRWQILGLLWHRESVEPMYQVVPPDPSLRTYTEEILVKQSTYVGETHTF--VDKGGNLSISLNSETLPTTPKAAACELTSQERDSALLRYKQKKKTRRYDKHIRYESRKVRAESRVRVKGRFAKMEQ 389
BLAST of g.arboreum_cottongen_reftransV1_0018556 vs. ExPASy TrEMBL
Match: A0A0B2SGT4_GLYSO (Zinc finger protein CONSTANS-LIKE 13 OS=Glycine soja GN=glysoja_002130 PE=4 SV=1) HSP 1 Score: 254.988 bits (650), Expect = 8.677e-76 Identity = 160/333 (48.05%), Postives = 201/333 (60.36%), Query Frame = -2 Query: 640 SLSQEKHSLANQLFSKHSRSQLCDACDGSPASIFCETEQSVFCSNCDWESHKFS-SSSLHNRRPIEGFTGCPSVNELVSIVGIEDLGEKKXXXXXXXXXXXXXXLS-----------WENPVIXXXXXXXXXXXXDHGFKPTDVLPLPKNRNAHCGQHKEEVLHQLRELAKSEPILSFDNTGDLQTGTVHTSCTNDTAPIPFPAYESSALRFFGDNVEMTDQVFVPFSELRGHPEECAVVPDKH----LGSSRTIPVSDSLGNQQHQIDTGTVSALPKVAVHELNSQERDSAISRYKEKRKTRRFDKHIRYESRKVRAESRTRIKGRFAKVEH 1590 S +E HS NQLFSKH+R+ LCDACD SPA+I C T+ SV C NCDWE+H + S SLH RRP+EGFTGCPSV+EL+SIVG D+ +K + W+ P + DDL+ SS S H F+ V PLPKNR A CGQHKEE+L QLRELAKSEP+ D +Q+G + D FP++E + ++ E QV P + + EE +P KH +G + T D+ G + + T+S PK A EL SQERDSA+ RYK+K+KTRRFDKHIRYESRKVRAESR R+KGRFAK+ H Sbjct: 31 SCDREVHS-TNQLFSKHTRTLLCDACDDSPATILCSTDTSVLCQNCDWENHNPALSDSLHERRPLEGFTGCPSVSELLSIVGFSDISKKSLLFSPQGSVADGFFGASEIEGLSDMFVWDAPSFVTLDDLISSSPSSHSFQAMKVPPLPKNRKAACGQHKEEILSQLRELAKSEPL---DLEPYVQSGNLSLGFERDPEADIFPSHE-----WHRESSEPMHQVVPPDPSMGTYTEE---IPVKHSTSAVGENHTY--GDNEGKPSISLKSETLSTTPKAAACELTSQERDSALLRYKQKKKTRRFDKHIRYESRKVRAESRVRVKGRFAKMGH 349
BLAST of g.arboreum_cottongen_reftransV1_0018556 vs. ExPASy TrEMBL
Match: D0EP04_SOYBN (CONSTANS-like zinc finger protein OS=Glycine max GN=COL9 PE=2 SV=1) HSP 1 Score: 254.988 bits (650), Expect = 8.677e-76 Identity = 160/333 (48.05%), Postives = 201/333 (60.36%), Query Frame = -2 Query: 640 SLSQEKHSLANQLFSKHSRSQLCDACDGSPASIFCETEQSVFCSNCDWESHKFS-SSSLHNRRPIEGFTGCPSVNELVSIVGIEDLGEKKXXXXXXXXXXXXXXLS-----------WENPVIXXXXXXXXXXXXDHGFKPTDVLPLPKNRNAHCGQHKEEVLHQLRELAKSEPILSFDNTGDLQTGTVHTSCTNDTAPIPFPAYESSALRFFGDNVEMTDQVFVPFSELRGHPEECAVVPDKH----LGSSRTIPVSDSLGNQQHQIDTGTVSALPKVAVHELNSQERDSAISRYKEKRKTRRFDKHIRYESRKVRAESRTRIKGRFAKVEH 1590 S +E HS NQLFSKH+R+ LCDACD SPA+I C T+ SV C NCDWE+H + S SLH RRP+EGFTGCPSV+EL+SIVG D+ +K + W+ P + DDL+ SS S H F+ V PLPKNR A CGQHKEE+L QLRELAKSEP+ D +Q+G + D FP++E + ++ E QV P + + EE +P KH +G + T D+ G + + T+S PK A EL SQERDSA+ RYK+K+KTRRFDKHIRYESRKVRAESR R+KGRFAK+ H Sbjct: 31 SCDREVHS-TNQLFSKHTRTLLCDACDDSPATILCSTDTSVLCQNCDWENHNPALSDSLHERRPLEGFTGCPSVSELLSIVGFSDISKKSLLFSPQGSVADGFFGASEIEGLSDMFVWDAPSFVTLDDLISSSPSSHSFQAMKVPPLPKNRKAACGQHKEEILSQLRELAKSEPL---DLEPYVQSGNLSLGFERDPEADIFPSHE-----WHRESSEPMHQVVPPDPSMGTYTEE---IPVKHSTSAVGENHTY--GDNEGKPSISLKSETLSTTPKAAACELTSQERDSALLRYKQKKKTRRFDKHIRYESRKVRAESRVRVKGRFAKMGH 349
BLAST of g.arboreum_cottongen_reftransV1_0018556 vs. ExPASy TrEMBL
Match: K4CV33_SOLLC (Uncharacterized protein OS=Solanum lycopersicum GN=Solyc09g074560.2 PE=4 SV=1) HSP 1 Score: 254.218 bits (648), Expect = 2.958e-75 Identity = 159/342 (46.49%), Postives = 200/342 (58.48%), Query Frame = -2 Query: 634 QEKHSLANQLFSKHSRSQLCDACDGSPASIFCETEQSVFCSNCDWESHKFSSSSLHNRRPIEGFTGCPSVNELVSIVGIEDLGEKKXXXXXXXXXXXXXXLS-WENP-VIXXXXXXXXXXXXDHGFKPTDVLPLPKNRNAHCGQHKEEVLHQLRELAKSEPILSFDNTGDLQTGTVHTSCTNDTAPIP-------------------FPAYESSALRFFGDNVEMTDQVFVPFSELRGHPEECAVVPDKHLGSSRTIPVSDSLGN-----QQHQIDTGTVSALPKVAVHELNSQERDSAISRYKEKRKTRRFDKHIRYESRKVRAESRTRIKGRFAKVEH*D 1581 +E HS NQLF+KH+R LC+ CD SPASI C TE SV C NCDWESH SLH RRP+EGFTGCPSV+EL+SI+G EDLG+K+ W+ P V++ D + +++S H ++ V PLPKNRNA CG+HKEE+L QLREL+K EP N+GD Q V T+ P+ P+ E SA + GD E DQ F S E ++PD R V D+ G H T T +PKV ELNSQER++A+SRYKEK+KTRR++KHIRYESRK RAE+RTRIKGRFAK+++ D Sbjct: 41 REVHS-TNQLFTKHTRWLLCNLCDSSPASILCCTETSVLCQNCDWESHN-KLLSLHERRPLEGFTGCPSVSELLSILGFEDLGKKELLCGGDDGAYGFSDWVIWDAPSVVTLDDLIANNNESRHNYQAIGVPPLPKNRNAACGKHKEEILGQLRELSKLEP-----NSGDDQDENVPTTGFQSMEPVQNCPLRYKGSGFMQRSDQHVVPSSEGSAFHWHGDTGEFVDQGFSS-SLTDCFIETKCLLPD------RDSDVCDASGGGNEEQSHHPTTTETFQMVPKVVHRELNSQERETAVSRYKEKKKTRRYEKHIRYESRKARAETRTRIKGRFAKMDYRD 368
BLAST of g.arboreum_cottongen_reftransV1_0018556 vs. ExPASy Swiss-Prot
Match: COL13_ARATH (Zinc finger protein CONSTANS-LIKE 13 OS=Arabidopsis thaliana GN=COL13 PE=2 SV=1) HSP 1 Score: 237.654 bits (605), Expect = 2.091e-71 Identity = 144/312 (46.15%), Postives = 193/312 (61.86%), Query Frame = -2 Query: 646 LANQLFSKHSRSQLCDACDGSPASIFCETEQSVFCSNCDWESHKFSSSSLHNRRPIEGFTGCPSVNELVSIVGIEDLGEKKXXXXXXXXXXXXXXLSWENP-VIXXXXXXXXXXXXDHGFKPTDVLPLPKNRNAHCGQHKEEVLHQLRELAKSEP-ILSFDN-TGDLQTGTVHTSCTNDTAPIPFPAYE-SSALRFFGDNVEMTDQVFVPFSELRGHPEECAVVPDK-HLGSSRTIPVSDSLGNQQHQIDTGTVSALPKVAVHELNSQERDSAISRYKEKRKTRRFDKHIRYESRKVRAESRTRIKGRFAKV 1566 +ANQLF+KH RS LCD+C+ SP+S+FCETE+SV C NCDW+ H +SSSLH+RRP EGFTGCPSV EL++IVG++DL L WE+P ++S D ++ H F+ TDV PLPKNR+A CG++K+E++ QLR L++SEP L F+ ++ G AP F E S L++F + D P+ L + E P+ SS +PVS L + + V + HE+NS ER+SA+SRYKEK+K+RR++KHIRYESRKVRAESRTRI+GRFAK Sbjct: 42 VANQLFAKHFRSLLCDSCNESPSSLFCETERSVLCQNCDWQHHT-ASSSLHSRRPFEGFTGCPSVPELLAIVGLDDL-------------TLDSGLLWESPEIVSLNDLIVSGGSGTHNFRATDVPPLPKNRHATCGKYKDEMIRQLRGLSRSEPGCLKFETPDAEIDAGFQFL------APDLFSTCELESGLKWF----DQQDHEDFPYCSLLKNLSESDEKPENVDRESSVMVPVSGCLNRCEEETVMVPVITSTRSMTHEINSLERNSALSRYKEKKKSRRYEKHIRYESRKVRAESRTRIRGRFAKA 329
BLAST of g.arboreum_cottongen_reftransV1_0018556 vs. ExPASy Swiss-Prot
Match: COL14_ARATH (Zinc finger protein CONSTANS-LIKE 14 OS=Arabidopsis thaliana GN=COL14 PE=2 SV=2) HSP 1 Score: 85.5001 bits (210), Expect = 1.458e-16 Identity = 44/87 (50.57%), Postives = 55/87 (63.22%), Query Frame = -2 Query: 1324 QEKHSLANQLFSKHSRSQLCDACDGSPASIFCETEQSVFCSNCDWESH-KFSSSSLHNRRPIEGFTGCPSVNELVSIVGIEDLGEKK 1581 Q HS AN L KH RSQ+CD C P S+ C T+ V C CDW+ H SSS+ H R +EGF+GCPSV EL ++ GI+ G+KK Sbjct: 37 QHVHS-ANLLSRKHVRSQICDNCSKEPVSVRCFTDNLVLCQECDWDVHGSCSSSATHERSAVEGFSGCPSVLELAAVWGIDLKGKKK 122 HSP 2 Score: 73.9442 bits (180), Expect = 8.119e-13 Identity = 32/49 (65.31%), Postives = 40/49 (81.63%), Query Frame = -2 Query: 646 ELNSQERDSAISRYKEKRKTRRFDKHIRYESRKVRAESRTRIKGRFAKV 792 E +Q RD+A+ RYKEK+KTRR+DK IRYE+RK RAE+R R+KGRF K Sbjct: 351 EQMAQNRDNAMQRYKEKKKTRRYDKTIRYETRKARAETRLRVKGRFVKA 399
BLAST of g.arboreum_cottongen_reftransV1_0018556 vs. ExPASy Swiss-Prot
Match: COL15_ARATH (Zinc finger protein CONSTANS-LIKE 15 OS=Arabidopsis thaliana GN=COL15 PE=2 SV=1) HSP 1 Score: 75.0998 bits (183), Expect = 4.085e-13 Identity = 36/81 (44.44%), Postives = 49/81 (60.49%), Query Frame = -2 Query: 1342 QEKHSLANQLFSKHSRSQLCDACDGSPASIFCETEQSVFCSNCDWESH-KFSSSSLHNRRPIEGFTGCPSVNELVSIVGIE 1581 Q+ H+ AN L KH RSQ+CD C P S+ C T+ + C CDW+ H S S H R +EGF+GCPS EL ++ G++ Sbjct: 34 QQVHT-ANLLSRKHVRSQICDNCGNEPVSVRCFTDNLILCQECDWDVHGSCSVSDAHVRSAVEGFSGCPSALELAALWGLD 113 HSP 2 Score: 70.0922 bits (170), Expect = 1.597e-11 Identity = 31/51 (60.78%), Postives = 38/51 (74.51%), Query Frame = -2 Query: 631 SQERDSAISRYKEKRKTRRFDKHIRYESRKVRAESRTRIKGRFAKVEH*DY 783 +Q R A+ RYKEKRKTRR+DK IRYESRK RA++R R++GRF K Y Sbjct: 382 AQNRGDAMQRYKEKRKTRRYDKTIRYESRKARADTRLRVRGRFVKASEAPY 432
BLAST of g.arboreum_cottongen_reftransV1_0018556 vs. ExPASy Swiss-Prot
Match: COL5_ARATH (Zinc finger protein CONSTANS-LIKE 5 OS=Arabidopsis thaliana GN=COL5 PE=2 SV=2) HSP 1 Score: 71.2478 bits (173), Expect = 4.464e-12 Identity = 33/69 (47.83%), Postives = 48/69 (69.57%), Query Frame = -2 Query: 649 GNQQHQIDTGTVSALPKVAVHELNSQERDSAISRYKEKRKTRRFDKHIRYESRKVRAESRTRIKGRFAK 855 GN + ++ T+++ H+ +S +R++ + RY+EKRK R+F+K IRY SRK AESR RIKGRFAK Sbjct: 258 GNTNNSVNRSTITSSTTGGDHQASSMDREARVLRYREKRKNRKFEKTIRYASRKAYAESRPRIKGRFAK 326
BLAST of g.arboreum_cottongen_reftransV1_0018556 vs. ExPASy Swiss-Prot
Match: COL2_ARATH (Zinc finger protein CONSTANS-LIKE 2 OS=Arabidopsis thaliana GN=COL2 PE=1 SV=1) HSP 1 Score: 67.781 bits (164), Expect = 5.530e-11 Identity = 33/58 (56.90%), Postives = 41/58 (70.69%), Query Frame = -2 Query: 649 VSALPKVAVHELNSQERDSAISRYKEKRKTRRFDKHIRYESRKVRAESRTRIKGRFAK 822 +S P V +L ER++ + RY+EK+KTR+FDK IRY SRK AE R RIKGRFAK Sbjct: 262 LSGPPTQVVQQLTPMEREARVLRYREKKKTRKFDKTIRYASRKAYAEIRPRIKGRFAK 319
BLAST of g.arboreum_cottongen_reftransV1_0018556 vs. ExPASy Swiss-Prot
Match: COL4_ARATH (Zinc finger protein CONSTANS-LIKE 4 OS=Arabidopsis thaliana GN=COL4 PE=2 SV=2) HSP 1 Score: 67.0106 bits (162), Expect = 1.070e-10 Identity = 36/69 (52.17%), Postives = 43/69 (62.32%), Query Frame = -2 Query: 649 GNQQHQIDTGTVSALPKVAVHELNSQERDSAISRYKEKRKTRRFDKHIRYESRKVRAESRTRIKGRFAK 855 G D GT A+P L S ER++ + RY+EKRK R+F+K IRY SRK AE R RIKGRFAK Sbjct: 274 GPATSGADPGTQRAVP------LTSAEREARVMRYREKRKNRKFEKTIRYASRKAYAEMRPRIKGRFAK 336
BLAST of g.arboreum_cottongen_reftransV1_0018556 vs. ExPASy Swiss-Prot
Match: COL10_ARATH (Zinc finger protein CONSTANS-LIKE 10 OS=Arabidopsis thaliana GN=COL10 PE=1 SV=1) HSP 1 Score: 66.2402 bits (160), Expect = 2.020e-10 Identity = 31/73 (42.47%), Postives = 44/73 (60.27%), Query Frame = -2 Query: 1354 ANQLFSKHSRSQLCDACDGSPASIFCETEQSVFCSNCDWESH---KFSSSSLHNRRPIEGFTGCPSVNELVSI 1563 AN L +HSR+ +C+ C+ PAS+ C E+ C NCDW H +++S H R+ I ++GCPS EL SI Sbjct: 35 ANALSKRHSRTLVCERCNAQPASVRCSDERVSLCQNCDWSGHDGKNSTTTSHHKRQTINCYSGCPSSAELSSI 107 HSP 2 Score: 62.003 bits (149), Expect = 5.478e-9 Identity = 26/42 (61.90%), Postives = 34/42 (80.95%), Query Frame = -2 Query: 649 RDSAISRYKEKRKTRRFDKHIRYESRKVRAESRTRIKGRFAK 774 R++A+ RYKEK+K R+FDK +RY SRK RA+ R R+KGRF K Sbjct: 316 RNNAVMRYKEKKKARKFDKRVRYVSRKERADVRRRVKGRFVK 357
BLAST of g.arboreum_cottongen_reftransV1_0018556 vs. ExPASy Swiss-Prot
Match: COL9_ARATH (Zinc finger protein CONSTANS-LIKE 9 OS=Arabidopsis thaliana GN=COL9 PE=2 SV=1) HSP 1 Score: 63.929 bits (154), Expect = 1.108e-9 Identity = 29/49 (59.18%), Postives = 37/49 (75.51%), Query Frame = -2 Query: 631 RDSAISRYKEKRKTRRFDKHIRYESRKVRAESRTRIKGRFAKV-EH*DY 774 R++A+ RYKEK+K R+FDK +RY SRK RA+ R R+KGRF K E DY Sbjct: 315 RNNAVMRYKEKKKARKFDKRVRYASRKARADVRRRVKGRFVKAGEAYDY 363 HSP 2 Score: 62.003 bits (149), Expect = 5.131e-9 Identity = 30/80 (37.50%), Postives = 43/80 (53.75%), Query Frame = -2 Query: 1354 ANQLFSKHSRSQLCDACDGSPASIFCETEQSVFCSNCDWESH----------KFSSSSLHNRRPIEGFTGCPSVNELVSI 1563 AN L +HSR+ +C+ C+ PA++ C E+ C NCDW H +S H R+ I ++GCPS +EL SI Sbjct: 35 ANALSKRHSRTLVCERCNAQPATVRCVEERVSLCQNCDWSGHNNSNNNNSSSSSTSPQQHKRQTISCYSGCPSSSELASI 114
BLAST of g.arboreum_cottongen_reftransV1_0018556 vs. ExPASy Swiss-Prot
Match: CONS_ARATH (Zinc finger protein CONSTANS OS=Arabidopsis thaliana GN=CO PE=1 SV=1) HSP 1 Score: 63.1586 bits (152), Expect = 2.143e-9 Identity = 33/67 (49.25%), Postives = 44/67 (65.67%), Query Frame = -2 Query: 643 GTVSALPK-----VAVHELNSQERDSAISRYKEKRKTRRFDKHIRYESRKVRAESRTRIKGRFAKVE 828 GTV P + V +L+ +R++ + RY+EKRKTR+F+K IRY SRK AE R R+ GRFAK E Sbjct: 283 GTVEQQPDPASQMITVTQLSPMDREARVLRYREKRKTRKFEKTIRYASRKAYAEIRPRVNGRFAKRE 349
BLAST of g.arboreum_cottongen_reftransV1_0018556 vs. ExPASy Swiss-Prot
Match: COL3_ARATH (Zinc finger protein CONSTANS-LIKE 3 OS=Arabidopsis thaliana GN=COL3 PE=1 SV=1) HSP 1 Score: 61.6178 bits (148), Expect = 3.767e-9 Identity = 29/48 (60.42%), Postives = 37/48 (77.08%), Query Frame = -2 Query: 649 ELNSQERDSAISRYKEKRKTRRFDKHIRYESRKVRAESRTRIKGRFAK 792 +L+ ER++ + RY+EKRK R+F+K IRY SRK AE R RIKGRFAK Sbjct: 223 QLSPAEREARVLRYREKRKNRKFEKTIRYASRKAYAEMRPRIKGRFAK 270 The following BLAST results are available for this feature:
BLAST of g.arboreum_cottongen_reftransV1_0018556 vs. ExPASy TrEMBL
Analysis Date: 2016-11-15 (Homology Analysis for Gossypium arboreum CottonGen RefTrans V1 vs TrEMBL) Total hits: 25
Pagesback to top
BLAST of g.arboreum_cottongen_reftransV1_0018556 vs. ExPASy Swiss-Prot
Analysis Date: 2016-11-15 (Homology Analysis for Gossypium arboreum CottonGen RefTrans V1 vs SwissProt) Total hits: 16
Pagesback to topInterPro
Analysis Name: InterProScan analysis for Gossypium arboreum CottonGen RefTrans V1
Date Performed: 2016-11-14
Sequences
The
following sequences are available for this feature:
contig sequence >g.arboreum_cottongen_reftransV1_0018556 ID=g.arboreum_cottongen_reftransV1_0018556; Name=g.arboreum_cottongen_reftransV1_0018556; organism=Gossypium arboreum; type=contig; length=1594bpback to top Annotated Terms
The
following terms have been associated with
this contig:
|