g.arboreum_cottongen_reftransV1_0018556, g.arboreum_cottongen_reftransV1_0018556 (contig) Gossypium arboreum
Overview
Alignments
The following features are aligned
Analyses
This contig is derived from or has results from the following analyses
Homology
BLAST of g.arboreum_cottongen_reftransV1_0018556 vs. ExPASy TrEMBL
Match: A0A0D2R616_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_008G008400 PE=4 SV=1) HSP 1 Score: 552.362 bits (1422), Expect = 0.000e+0 Identity = 300/317 (94.64%), Postives = 306/317 (96.53%), Query Frame = -2 Query: 640 SLSQEKHSLANQLFSKHSRSQLCDACDGSPASIFCETEQSVFCSNCDWESHKFSSSSLHNRRPIEGFTGCPSVNELVSIVGIEDLGEKKXXXXXXXXXXXXXXLSWENPVIXXXXXXXXXXXXDHGFKPTDVLPLPKNRNAHCGQHKEEVLHQLRELAKSEPILSFDNTGDLQTGTVHTSCTNDTAPIPFPAYESSALRFFGDNVEMTDQVFVPFSELRGHPEECAVVPDKHLGSSRTIPVSDSLGNQQHQIDTGTVSALPKVAVHELNSQERDSAISRYKEKRKTRRFDKHIRYESRKVRAESRTRIKGRFAKVEH 1590 S +E HS ANQLFSKHSRSQLCDACDGSPASIFCETEQSVFCSNCDWESHKFS+SSLHNRRPIEGFTGCPSVNELVS VGIED+GEKKGGDDCGYDDGWLDLLSWENPVISSFDDLLVSSDSDHGFKPTDVLPLPKNRNA+CGQHKEEVLHQLRELAKSEP LSFDNT DLQTGTVHTSCTNDTAPI FPAYESSALRFFGDNVEMTD+VFVPFSELRGH EECAVVPDKHLGSSRTIPVSDSLGNQQHQID GTVSALPKVAVHELNSQERDSAISRYKEKRKTRRFDKHIRYESRKVRAESR RIKGRFAK+EH Sbjct: 37 SCDREVHS-ANQLFSKHSRSQLCDACDGSPASIFCETEQSVFCSNCDWESHKFSTSSLHNRRPIEGFTGCPSVNELVSFVGIEDVGEKKGGDDCGYDDGWLDLLSWENPVISSFDDLLVSSDSDHGFKPTDVLPLPKNRNANCGQHKEEVLHQLRELAKSEPTLSFDNTDDLQTGTVHTSCTNDTAPISFPAYESSALRFFGDNVEMTDKVFVPFSELRGHTEECAVVPDKHLGSSRTIPVSDSLGNQQHQIDAGTVSALPKVAVHELNSQERDSAISRYKEKRKTRRFDKHIRYESRKVRAESRARIKGRFAKLEH 352
BLAST of g.arboreum_cottongen_reftransV1_0018556 vs. ExPASy TrEMBL
Match: A0A061DQF5_THECC (B-box type zinc finger protein with CCT domain, putative OS=Theobroma cacao GN=TCM_004548 PE=4 SV=1) HSP 1 Score: 423.32 bits (1087), Expect = 9.025e-141 Identity = 245/338 (72.49%), Postives = 268/338 (79.29%), Query Frame = -2 Query: 640 SLSQEKHSLANQLFSKHSRSQLCDACDGSPASIFCETEQSVFCSNCDWESHKFSSSSLHNRRPIEGFTGCPSVNELVSIVGIEDLG--------EKKXXXXXXXXXXXXXXLSWENPVIXXXXXXXXXXXXDHGFKPTDVLPLPKNRNAHCGQHKEEVLHQLRELAKSEPILSFD------------NTGDLQTGTVHTSCTNDTAPIPFPAYESSALRFFGDNVEMTDQVFVPFSELRGHPEECAVVPDKHLGSSRTIPVSDSLGNQ-QHQIDTGTVSALPKVAVHELNSQERDSAISRYKEKRKTRRFDKHIRYESRKVRAESRTRIKGRFAKVEH 1590 S +E HS ANQLF++H RSQLCDACD SPASIFCETEQSVFCSNCDWESHK SSSSLHNRRPIEGF+GCPSV+ELV+ GIEDLG EK G D G DDG LDLLSWE P SS DDL+VSSD HGFKPTDV PL KNRNA CG+HKEE+L QLRELAKSEP LS D NT + Q G+VHTSC D PIPFPAYE SA + F DNVEM +QVF+PFS+LRG+ EE AVVP++HL +SRT V+DSL +Q QHQI GT SALPK+ VHELNSQERDSAISRYKEKRKTRR+DKHIRYESRKVRAESRTRIKGRFAKVEH Sbjct: 37 SCDREVHS-ANQLFTRHPRSQLCDACDKSPASIFCETEQSVFCSNCDWESHKCSSSSLHNRRPIEGFSGCPSVSELVNSFGIEDLGSKTLFLSEEKVGCGDGGEDDGLLDLLSWETPEFSSLDDLIVSSDFGHGFKPTDVPPLRKNRNASCGRHKEEMLLQLRELAKSEPNLSTDFENVTGFLPLLPNTYNSQPGSVHTSCKIDKDPIPFPAYELSAPQCFSDNVEMANQVFLPFSQLRGYTEESAVVPNEHLDTSRTAHVNDSLEDQLQHQIAAGTTSALPKIVVHELNSQERDSAISRYKEKRKTRRYDKHIRYESRKVRAESRTRIKGRFAKVEH 373
BLAST of g.arboreum_cottongen_reftransV1_0018556 vs. ExPASy TrEMBL
Match: A0A0D2TTQ8_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_008G008400 PE=4 SV=1) HSP 1 Score: 374.785 bits (961), Expect = 6.634e-123 Identity = 232/317 (73.19%), Postives = 241/317 (76.03%), Query Frame = -2 Query: 640 SLSQEKHSLANQLFSKHSRSQLCDACDGSPASIFCETEQSVFCSNCDWESHKFSSSSLHNRRPIEGFTGCPSVNELVSIVGIEDLGEKKXXXXXXXXXXXXXXLSWENPVIXXXXXXXXXXXXDHGFKPTDVLPLPKNRNAHCGQHKEEVLHQLRELAKSEPILSFDNTGDLQTGTVHTSCTNDTAPIPFPAYESSALRFFGDNVEMTDQVFVPFSELRGHPEECAVVPDKHLGSSRTIPVSDSLGNQQHQIDTGTVSALPKVAVHELNSQERDSAISRYKEKRKTRRFDKHIRYESRKVRAESRTRIKGRFAKVEH 1590 S +E HS ANQLFSKHSRSQLCDACDGSPASIFCETEQSVFCSNCDWESHKFS+SSLHNRRPIEGFTGCPSVNELVS VGIED+GEKKGGDDCGYDDGWLDLLSWENPVISSFDDLLVSSDSDHGFKPTDVLPLP KS + F + ++ D +PF SELRGH EECAVVPDKHLGSSRTIPVSDSLGNQQHQID GTVSALPKVAVHELNSQERDSAISRYKEKRKTRRFDKHIRYESRKVRAESR RIKGRFAK+EH Sbjct: 37 SCDREVHS-ANQLFSKHSRSQLCDACDGSPASIFCETEQSVFCSNCDWESHKFSTSSLHNRRPIEGFTGCPSVNELVSFVGIEDVGEKKGGDDCGYDDGWLDLLSWENPVISSFDDLLVSSDSDHGFKPTDVLPLP----------------------KSSALRFFGDNVEM----------TDKVFVPF-------------------------SELRGHTEECAVVPDKHLGSSRTIPVSDSLGNQQHQIDAGTVSALPKVAVHELNSQERDSAISRYKEKRKTRRFDKHIRYESRKVRAESRARIKGRFAKLEH 295
BLAST of g.arboreum_cottongen_reftransV1_0018556 vs. ExPASy TrEMBL
Match: A0A0D2R4H8_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_004G140600 PE=4 SV=1) HSP 1 Score: 346.28 bits (887), Expect = 5.982e-111 Identity = 196/329 (59.57%), Postives = 234/329 (71.12%), Query Frame = -2 Query: 643 SLSQEKHSLANQLFSKHSRSQLCDACDGSPASIFCETEQSVFCSNCDWESHKFSSSSLHNRRPIEGFTGCPSVNELVSIVGIEDLGEKKXXXXXXXXXXXXXXLSWENPVIXXXXXXXXXXXXDHGFKPTDVLPLPKNRNAHCGQHKEEVLHQLRELAKSEPILSFDN---------TGDLQTGTVHTSCTNDTAPIPFPAYESSALRF--FGDNVEMTDQVFVPFSELRGHPEECAVVPDKHLGSSRTIPVSDSLGNQQH--QIDTGTVSALPKVAVHELNSQERDSAISRYKEKRKTRRFDKHIRYESRKVRAESRTRIKGRFAKVE 1590 S +E HS ANQLF+KHSRSQLCDACD SPAS+FCETEQSVFCSNCDWE H+ SLHNRRP+E FTGCPSV+EL+S +GIEDLG K D L +WE P+IS FD ++V +D DHGFK TDV PLPKNRN+ CGQHKEE+ HQL ELAKS+P L+F T Q ++ SC ND P+ PA E+S L+ F DNVE+T+Q + + EE A V + H+ SR I V+D +QQ Q GT+SALPKV+VHELNSQER++AISRYKEK+KTRR+DKH+RYESRK RAESRTRIKGRFAKV+ Sbjct: 36 SCDREVHS-ANQLFTKHSRSQLCDACDESPASLFCETEQSVFCSNCDWERHR---CSLHNRRPVEVFTGCPSVSELLSFLGIEDLGNDKASCWSEDDGFLDFL-TWECPLISGFDGVIVPNDMDHGFKATDVPPLPKNRNSSCGQHKEEIFHQLHELAKSDPTLTFQKIDLQSLIPETDHFQPASMQPSCNNDADPVSCPALETSPLQCLKFNDNVEITNQALL-------YTEENARVANTHVDCSRNIDVNDGPEDQQMKPQTGVGTISALPKVSVHELNSQERETAISRYKEKKKTRRYDKHVRYESRKARAESRTRIKGRFAKVK 352
BLAST of g.arboreum_cottongen_reftransV1_0018556 vs. ExPASy TrEMBL
Match: A0A0D2PL15_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_008G008400 PE=4 SV=1) HSP 1 Score: 310.842 bits (795), Expect = 2.171e-98 Identity = 182/194 (93.81%), Postives = 186/194 (95.88%), Query Frame = -2 Query: 1009 SLSQEKHSLANQLFSKHSRSQLCDACDGSPASIFCETEQSVFCSNCDWESHKFSSSSLHNRRPIEGFTGCPSVNELVSIVGIEDLGEKKXXXXXXXXXXXXXXLSWENPVIXXXXXXXXXXXXDHGFKPTDVLPLPKNRNAHCGQHKEEVLHQLRELAKSEPILSFDNTGDLQTGTVHTSCTNDTAPIPFPAYE 1590 S +E HS ANQLFSKHSRSQLCDACDGSPASIFCETEQSVFCSNCDWESHKFS+SSLHNRRPIEGFTGCPSVNELVS VGIED+GEKKGGDDCGYDDGWLDLLSWENPVISSFDDLLVSSDSDHGFKPTDVLPLPKNRNA+CGQHKEEVLHQLRELAKSEP LSFDNT DLQTGTVHTSCTNDTAPI FPAYE Sbjct: 37 SCDREVHS-ANQLFSKHSRSQLCDACDGSPASIFCETEQSVFCSNCDWESHKFSTSSLHNRRPIEGFTGCPSVNELVSFVGIEDVGEKKGGDDCGYDDGWLDLLSWENPVISSFDDLLVSSDSDHGFKPTDVLPLPKNRNANCGQHKEEVLHQLRELAKSEPTLSFDNTDDLQTGTVHTSCTNDTAPISFPAYE 229
BLAST of g.arboreum_cottongen_reftransV1_0018556 vs. ExPASy TrEMBL
Match: V4TAX4_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10020545mg PE=4 SV=1) HSP 1 Score: 305.064 bits (780), Expect = 1.259e-94 Identity = 177/344 (51.45%), Postives = 223/344 (64.83%), Query Frame = -2 Query: 640 QEKHSLANQLFSKHSRSQLCDACDGSPASIFCETEQSVFCSNCDWESHKFSS---SSLHNRRPIEGFTGCPSVNELVSIVGIEDLGEKKXXXXXXXXXXX----------XXXLSWENPVIXXXXXXXXXXXXDHGFKPTDVLPLPKNRNAHCGQHKEEVLHQLRELAKSEPILSFDNTGD---------------LQTGTVHTSCTNDTAPIPFPAYESSALRFFGDNVEMTDQVFVPFSELRGHPEECAVVPDKHLGSSRTIPVSD--SLGNQQHQIDTGTVSALPKVAVHELNSQERDSAISRYKEKRKTRRFDKHIRYESRKVRAESRTRIKGRFAKVEH 1581 +E HS NQLFSKHSRSQLCD CD SPASIFCETE SV C+NCDWESH S+ SS+HNRRPIE F+GCPSVNE+ +I+G +DL K + + DL +WE P S DDL+VSS++ H F+ V PLPKNRNA GQHKEE+LHQLR+LAK +P ++N Q G ++T D P FPAYE+S L++FGD+ + +Q+ P + + EE +VP+KH + + + G QH +T S +V+VHELNSQERDSA+SRYKEK+KTRR+DKH+RYESRKVRAESRTRIKGRFAK++H Sbjct: 47 KEVHS-TNQLFSKHSRSQLCDVCDASPASIFCETEHSVLCTNCDWESHSQSNLRVSSVHNRRPIESFSGCPSVNEMFAIIGFDDLDSKALFLNDETRNYSHFDGVDSDGFSDLFAWETPDFVSLDDLIVSSNAGHNFQAIGVPPLPKNRNAAGGQHKEEMLHQLRQLAKLDPNFKYENANIDEPIVGFHSLVPEPISQPGNMNTGSELDAEPNRFPAYEASTLQWFGDSFDHANQL--PSTLFKSCKEESFIVPEKHFDTDGFVKNINEGGEGQSQHPTNTEKSSVFHRVSVHELNSQERDSALSRYKEKKKTRRYDKHVRYESRKVRAESRTRIKGRFAKIDH 387
BLAST of g.arboreum_cottongen_reftransV1_0018556 vs. ExPASy TrEMBL
Match: A0A067H8R2_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g016553mg PE=4 SV=1) HSP 1 Score: 305.064 bits (780), Expect = 1.259e-94 Identity = 177/344 (51.45%), Postives = 223/344 (64.83%), Query Frame = -2 Query: 640 QEKHSLANQLFSKHSRSQLCDACDGSPASIFCETEQSVFCSNCDWESHKFSS---SSLHNRRPIEGFTGCPSVNELVSIVGIEDLGEKKXXXXXXXXXXX----------XXXLSWENPVIXXXXXXXXXXXXDHGFKPTDVLPLPKNRNAHCGQHKEEVLHQLRELAKSEPILSFDNTGD---------------LQTGTVHTSCTNDTAPIPFPAYESSALRFFGDNVEMTDQVFVPFSELRGHPEECAVVPDKHLGSSRTIPVSD--SLGNQQHQIDTGTVSALPKVAVHELNSQERDSAISRYKEKRKTRRFDKHIRYESRKVRAESRTRIKGRFAKVEH 1581 +E HS NQLFSKHSRSQLCD CD SPASIFCETE SV C+NCDWESH S+ SS+HNRRPIE F+GCPSVNE+ +I+G +DL K + + DL +WE P S DDL+VSS++ H F+ V PLPKNRNA GQHKEE+LHQLR+LAK +P ++N Q G ++T D P FPAYE+S L++FGD+ + +Q+ P + + EE +VP+KH + + + G QH +T S +V+VHELNSQERDSA+SRYKEK+KTRR+DKH+RYESRKVRAESRTRIKGRFAK++H Sbjct: 47 KEVHS-TNQLFSKHSRSQLCDVCDASPASIFCETEHSVLCTNCDWESHSQSNLRVSSVHNRRPIESFSGCPSVNEMFAIIGFDDLDSKALFLNDETRNYSHFDGVDSDGFSDLFAWETPDFVSLDDLIVSSNAGHNFQAIGVPPLPKNRNAAGGQHKEEMLHQLRQLAKLDPNFKYENANIDEPIVGFHSLVPEPISQPGNMNTGSELDAEPNRFPAYEASTLQWFGDSFDHANQL--PSTLFKSCKEESFIVPEKHFDTDGFVKNINEGGEGQSQHPTNTEKSSVFHRVSVHELNSQERDSALSRYKEKKKTRRYDKHVRYESRKVRAESRTRIKGRFAKIDH 387
BLAST of g.arboreum_cottongen_reftransV1_0018556 vs. ExPASy TrEMBL
Match: B9S3V9_RICCO (Putative uncharacterized protein OS=Ricinus communis GN=RCOM_0555710 PE=4 SV=1) HSP 1 Score: 302.753 bits (774), Expect = 1.976e-93 Identity = 186/364 (51.10%), Postives = 221/364 (60.71%), Query Frame = -2 Query: 643 SLSQEKHSLANQLFSKHSRSQLCDACDGSPASIFCETEQSVFCSNCDWESHKFSSSSLHNRRPIEGFTGCPSVNELVSIVGIEDLGEKKXXXXXXXXXXXXXXLS-----------------WENPVIXXXXXXXXXXXXDHGFKPTDVLPLPK----------------NRNAHCGQHKEEVLHQLRELA-----------KSEPILSFDNTG--DLQTGTVHTSCTNDTAPIPFPAYESSALRFFGDNVEMTDQVFVPFSELRGHPEECAVVPDK--HLGSSRTIPVSDSLGNQQHQIDTGTVSALPKVAVHELNSQERDSAISRYKEKRKTRRFDKHIRYESRKVRAESRTRIKGRFAKVE 1590 S +E HS NQLFSKH+RS LCD+CD SPASIFCETE SVFC NCDWE H S SS+HNRRPIEGF+G PSV+ELVSI+G EDLG+KK +++G L S WE P + S DDL+VSSDS F V PLPK NRNA CGQHKEE+L QLRELA ++EP F + ++QT H C PI P+YE + + DN E +QV VP + R H EE VVPDK ++ S + G Q+ TG +S PKV H++NSQERDSAISRYKEKRKTRR+DKHIRYESRK RAESRTRI+GRFAK++ Sbjct: 48 SCDREVHS-TNQLFSKHTRSLLCDSCDASPASIFCETEHSVFCQNCDWEKHNLSLSSVHNRRPIEGFSGFPSVSELVSILGFEDLGDKKDKKALLFNEGDNGLASSGPDGSGFEDGYSDLLIWETPAVVSIDDLIVSSDSGPNFPALGVPPLPKAIVFRFSLFYFSCKSQNRNAVCGQHKEEILRQLRELAGLEPDPNCHNPETEPTYVFQSAAGENMQTRMTHKCCEPVARPISSPSYEENIFNWLSDNGEAGNQVSVPCTLPRSHLEESPVVPDKQSNIDGSASYANGSHEGEPQYPASTGLISVFPKVVSHDINSQERDSAISRYKEKRKTRRYDKHIRYESRKARAESRTRIRGRFAKMD 410
BLAST of g.arboreum_cottongen_reftransV1_0018556 vs. ExPASy TrEMBL
Match: M5VM63_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa006893mg PE=4 SV=1) HSP 1 Score: 288.5 bits (737), Expect = 3.659e-88 Identity = 165/346 (47.69%), Postives = 217/346 (62.72%), Query Frame = -2 Query: 640 QEKHSLANQLFSKHSRSQLCDACDGSPASIFCETEQSVFCSNCDWESHKFSSSSLHNRRPIEGFTGCPSVNELVSIVGIEDLGEKKXXXXXXXXXXXXXXLS---------------------WENPVIXXXXXXXXXXXXDHGFKPTDVLPLPKNRNAHCGQHKEEVLHQLRELAKSEPILSFDNTG-----------DLQTGTVHTSCTNDTAPIPFPAYESSALRFFGDNVEMTDQVFVPFSELRGHPEECAVVPDKHLGSSRTIPVSDSLGNQQHQIDTGTVSALPKVAVHELNSQERDSAISRYKEKRKTRRFDKHIRYESRKVRAESRTRIKGRFAKVEH 1581 +E HS ANQLFSKH+RS LCDACDGSPASIFC TE SV C NCDWESH SSSS+H+RRP+EGF+GCP +NEL+++VG E++ +K G W+ P + S DDL+VS+ + + F+ V PLPKNRNA CG+HKEE+ QLR L KSEP L +N ++Q G++ T +D P FPAYE+ ++ D + P + +R + +EC VVPDKH + + ++ Q+++ SA PKVA HEL+SQ R++A+SRYKEK+KTRR++KHIRYESRKVRAESRTRIKGRFAK++H Sbjct: 49 REVHS-ANQLFSKHTRSLLCDACDGSPASIFCTTESSVLCQNCDWESHNLSSSSVHDRRPLEGFSGCPCLNELLTVVGFENMDKKALLLSDESGGGGGGGDGFLGCGVDGSFDLDDGFSDFLVWDTPSVVSLDDLIVSNPA-YKFQAMGVPPLPKNRNAACGRHKEEIFRQLRVLVKSEPNLFSENVDVKPLKSLASEQNMQRGSLFTGFEHDAEPTVFPAYEAHDFQY-NDCGAAEKRESSPKTFIRSYLQECCVVPDKHSYNDGSASHANDGHGHGGQMNSEASSAFPKVAAHELSSQNRETALSRYKEKKKTRRYEKHIRYESRKVRAESRTRIKGRFAKMDH 391
BLAST of g.arboreum_cottongen_reftransV1_0018556 vs. ExPASy TrEMBL
Match: A0A067K755_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_13861 PE=4 SV=1) HSP 1 Score: 272.707 bits (696), Expect = 9.889e-83 Identity = 164/333 (49.25%), Postives = 196/333 (58.86%), Query Frame = -2 Query: 643 NQLFSKHSRSQLCDACDGSPASIFCETEQSVFCSNCDWESHKFSSSSLHNRRPIEGFTGCPSVNELVSIVGIEDLGEKKXXXXXXXXXXXXXXLS-------------WENPVIXXXXXXXXXXXXDHGFKPTDVLPLPKNRNAHCGQHKEEVLHQLRELAKSEPILSFDN--------------TGDLQTGTVHTSCTNDTAPIPFPAYESSALRFFGDNVEMTDQVFVPFSELRGHPEECAVVPDKHLGSSRTIPVSDSLGNQQHQIDTGTVSALPKVAVHELNSQERDSAISRYKEKRKTRRFDKHIRYESRKVRAESRTRIKGRFAKVE 1560 N+LFSKH+RS LCDACD SPASIFCETE SV C NCDWE H S SS+HNRRPIEGF+GC SV+ELVSI G ED+G+KK L WE+P +S D + +S + F+ +V PLPKNRNA CG+HKEE+L QLRELA+SEP ++ N + Q +HT C E + ++ D E QV VP + R EE +V DK L N H + +PK+ HELNSQERDSAISRYKEKRKTRR+DKHIRYESRKVRAESRTRIKGRFAK++ Sbjct: 38 NKLFSKHTRSLLCDACDASPASIFCETEHSVLCQNCDWERHSLSVSSVHNRRPIEGFSGCRSVSELVSIWGFEDIGDKKALFLNEDSGLVGSGLDGSGFGDGYSDLLVWESPAVSIDDLIGLSGSGQN-FQALEVPPLPKNRNAVCGRHKEEILGQLRELARSEPDSNWKNPHTEPINVFQSSAEGQNRQLQNMHTGC------------EENVFQWISDPGEAGVQVSVPCTAARSDLEENFIVLDK-------------LVNGSH-----GATRVPKIGSHELNSQERDSAISRYKEKRKTRRYDKHIRYESRKVRAESRTRIKGRFAKID 339
BLAST of g.arboreum_cottongen_reftransV1_0018556 vs. ExPASy Swiss-Prot
Match: HD1_ORYSJ (Zinc finger protein HD1 OS=Oryza sativa subsp. japonica GN=HD1 PE=2 SV=1) HSP 1 Score: 62.3882 bits (150), Expect = 3.920e-9 Identity = 27/47 (57.45%), Postives = 38/47 (80.85%), Query Frame = -2 Query: 649 LNSQERDSAISRYKEKRKTRRFDKHIRYESRKVRAESRTRIKGRFAK 789 +S +R++ + RY+EK+K R+F+K IRYE+RK AE+R RIKGRFAK Sbjct: 321 FSSMDREARVLRYREKKKARKFEKTIRYETRKAYAEARPRIKGRFAK 367
BLAST of g.arboreum_cottongen_reftransV1_0018556 vs. ExPASy Swiss-Prot
Match: COL7_ARATH (Zinc finger protein CONSTANS-LIKE 7 OS=Arabidopsis thaliana GN=COL7 PE=2 SV=1) HSP 1 Score: 60.4622 bits (145), Expect = 1.635e-8 Identity = 39/105 (37.14%), Postives = 50/105 (47.62%), Query Frame = -2 Query: 649 GHPEECAVVPDKHLGSSRTIP----------VSDSLGNQQHQIDTGTVSALPKVAVHELNSQERDSAISRYKEKRKTRRFDKHIRYESRKVRAESRTRIKGRFAK 933 G P + + P+ LG + +P SD +Q D G ER++ + RYKEKR+TR F K IRYE RK+ AE R RIKGRF K Sbjct: 294 GSPWKTGIKPECMLGGNTCLPHVVGGYEKLMSSDGSVTRQQGRDGGGSDG------------EREARVLRYKEKRRTRLFSKKIRYEVRKLNAEQRPRIKGRFVK 386
BLAST of g.arboreum_cottongen_reftransV1_0018556 vs. ExPASy Swiss-Prot
Match: COL1_ARATH (Zinc finger protein CONSTANS-LIKE 1 OS=Arabidopsis thaliana GN=COL1 PE=1 SV=1) HSP 1 Score: 59.6918 bits (143), Expect = 2.640e-8 Identity = 27/47 (57.45%), Postives = 37/47 (78.72%), Query Frame = -2 Query: 649 LNSQERDSAISRYKEKRKTRRFDKHIRYESRKVRAESRTRIKGRFAK 789 L+ ++R++ + RY+EK+K R+F+K IRY SRK AE R RIKGRFAK Sbjct: 281 LSPRDREARVLRYREKKKMRKFEKTIRYASRKAYAEKRPRIKGRFAK 327
BLAST of g.arboreum_cottongen_reftransV1_0018556 vs. ExPASy Swiss-Prot
Match: COL16_ARATH (Zinc finger protein CONSTANS-LIKE 16 OS=Arabidopsis thaliana GN=COL16 PE=2 SV=2) HSP 1 Score: 57.7658 bits (138), Expect = 1.170e-7 Identity = 26/42 (61.90%), Postives = 33/42 (78.57%), Query Frame = -2 Query: 649 RDSAISRYKEKRKTRRFDKHIRYESRKVRAESRTRIKGRFAK 774 R++ +SRY+EKR+TR F K IRYE RK+ AE R R+KGRF K Sbjct: 361 REARVSRYREKRRTRLFSKKIRYEVRKLNAEKRPRMKGRFVK 402
BLAST of g.arboreum_cottongen_reftransV1_0018556 vs. ExPASy Swiss-Prot
Match: COL12_ARATH (Zinc finger protein CONSTANS-LIKE 12 OS=Arabidopsis thaliana GN=COL12 PE=2 SV=2) HSP 1 Score: 57.3806 bits (137), Expect = 1.541e-7 Identity = 26/45 (57.78%), Postives = 31/45 (68.89%), Query Frame = -2 Query: 646 QERDSAISRYKEKRKTRRFDKHIRYESRKVRAESRTRIKGRFAKV 780 Q R+ A RYKEK+ R F K IRY SRK RA++R R+KGRF K Sbjct: 305 QARNEAKLRYKEKKLKRSFGKQIRYASRKARADTRKRVKGRFVKA 349
BLAST of g.arboreum_cottongen_reftransV1_0018556 vs. ExPASy Swiss-Prot
Match: COL6_ARATH (Zinc finger protein CONSTANS-LIKE 6 OS=Arabidopsis thaliana GN=COL6 PE=2 SV=2) HSP 1 Score: 57.3806 bits (137), Expect = 1.576e-7 Identity = 26/42 (61.90%), Postives = 33/42 (78.57%), Query Frame = -2 Query: 649 RDSAISRYKEKRKTRRFDKHIRYESRKVRAESRTRIKGRFAK 774 R++ +SRY+EKR+TR F K IRYE RK+ AE R R+KGRF K Sbjct: 357 REARVSRYREKRRTRLFSKKIRYEVRKLNAEKRPRMKGRFVK 398 The following BLAST results are available for this feature:
BLAST of g.arboreum_cottongen_reftransV1_0018556 vs. ExPASy TrEMBL
Analysis Date: 2016-11-15 (Homology Analysis for Gossypium arboreum CottonGen RefTrans V1 vs TrEMBL) Total hits: 25
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BLAST of g.arboreum_cottongen_reftransV1_0018556 vs. ExPASy Swiss-Prot
Analysis Date: 2016-11-15 (Homology Analysis for Gossypium arboreum CottonGen RefTrans V1 vs SwissProt) Total hits: 16
Pagesback to topInterPro
Analysis Name: InterProScan analysis for Gossypium arboreum CottonGen RefTrans V1
Date Performed: 2016-11-14
Sequences
The
following sequences are available for this feature:
contig sequence >g.arboreum_cottongen_reftransV1_0018556 ID=g.arboreum_cottongen_reftransV1_0018556; Name=g.arboreum_cottongen_reftransV1_0018556; organism=Gossypium arboreum; type=contig; length=1594bpback to top Annotated Terms
The
following terms have been associated with
this contig:
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