g.arboreum_cottongen_reftransV1_0021584, g.arboreum_cottongen_reftransV1_0021584 (contig) Gossypium arboreum

Overview
Nameg.arboreum_cottongen_reftransV1_0021584
Unique Nameg.arboreum_cottongen_reftransV1_0021584
Typecontig
OrganismGossypium arboreum (Tree cotton)
Sequence length1262
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Chr3chromosomeg.arboreum_cottongen_reftransV1_0021584:1..1262 .
Chr3:382984..390828 +
Homology
[Close]
BLAST of g.arboreum_cottongen_reftransV1_0021584 vs. ExPASy TrEMBL
Match: A0A0D2RSD4_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_004G025600 PE=4 SV=1)

HSP 1 Score: 513.457 bits (1321), Expect = 1.803e-178
Identity = 264/268 (98.51%), Postives = 266/268 (99.25%), Query Frame = 3 
Query:  114 MEQVAGEREAEEFTLVARKPYFDLPTACPICLPLFIYLKLAHFPFRLSFNSIFPDSDQIPYVESGTYVAYNNENSGVVECLKKDGIVDLDSEFQSAPDWVSIQAMINSWLADALTYELWVGTDGRSAYKIYYSDLSWPIGKVLFLKQVYSVKQRLGITKDNAEHREDEIYRRAKIAYGALSTKLGEQNFLFDDRPSSLDATFLGHVLVTLHALPDTSVLRSKVLEHDNIVRYAEKLKTELIEXXXXXXXXXXXXXXXXXTPRKGPSNW 917
            MEQV GEREAEEFT+VARKPYF LPTACPICLPLFIYLKLAHFPFRLSFNSIFPDSDQIPYVESGTYVAYNNENSGVVECLKKDGIVDLDSEFQSAPDWVSIQAMINSWLADALTYELWVGTDGRSAYKIYYSDLSWPIGKVLFLKQVYSVKQRLGITKDNAEHREDEIYRRAKIAYGALSTKLGEQNFLFDDRPSSLDATFLGHVLVTLHALPDTSVLRSK+LEHDNIVRYAEKLKTELIESGSSSSGPQFRSVPSSSTPRKGPSNW
Sbjct:    1 MEQVVGEREAEEFTVVARKPYFGLPTACPICLPLFIYLKLAHFPFRLSFNSIFPDSDQIPYVESGTYVAYNNENSGVVECLKKDGIVDLDSEFQSAPDWVSIQAMINSWLADALTYELWVGTDGRSAYKIYYSDLSWPIGKVLFLKQVYSVKQRLGITKDNAEHREDEIYRRAKIAYGALSTKLGEQNFLFDDRPSSLDATFLGHVLVTLHALPDTSVLRSKLLEHDNIVRYAEKLKTELIESGSSSSGPQFRSVPSSSTPRKGPSNW 268
[Close]
BLAST of g.arboreum_cottongen_reftransV1_0021584 vs. ExPASy TrEMBL
Match: A0A0D2QY37_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_004G025600 PE=4 SV=1)

HSP 1 Score: 504.597 bits (1298), Expect = 7.190e-175
Identity = 264/279 (94.62%), Postives = 266/279 (95.34%), Query Frame = 3 
Query:  114 MEQVAGEREAEEFTLVARKPYFDLPTACPICLPLFIYLKLAHFPFRLSFNSIFPDSDQIPYVESGTYVAYNNENSGVVECLKKDGIVDLDSEFQSAPDWVSIQAMINSWLADALTYELWVGTDGRSAYKIYYSDLSWPIGKVLFLKQVYSVKQRLGITKDNAEHREDE-----------IYRRAKIAYGALSTKLGEQNFLFDDRPSSLDATFLGHVLVTLHALPDTSVLRSKVLEHDNIVRYAEKLKTELIEXXXXXXXXXXXXXXXXXTPRKGPSNW 917
            MEQV GEREAEEFT+VARKPYF LPTACPICLPLFIYLKLAHFPFRLSFNSIFPDSDQIPYVESGTYVAYNNENSGVVECLKKDGIVDLDSEFQSAPDWVSIQAMINSWLADALTYELWVGTDGRSAYKIYYSDLSWPIGKVLFLKQVYSVKQRLGITKDNAEHREDE           IYRRAKIAYGALSTKLGEQNFLFDDRPSSLDATFLGHVLVTLHALPDTSVLRSK+LEHDNIVRYAEKLKTELIESGSSSSGPQFRSVPSSSTPRKGPSNW
Sbjct:    1 MEQVVGEREAEEFTVVARKPYFGLPTACPICLPLFIYLKLAHFPFRLSFNSIFPDSDQIPYVESGTYVAYNNENSGVVECLKKDGIVDLDSEFQSAPDWVSIQAMINSWLADALTYELWVGTDGRSAYKIYYSDLSWPIGKVLFLKQVYSVKQRLGITKDNAEHREDENCTSLYSICGQIYRRAKIAYGALSTKLGEQNFLFDDRPSSLDATFLGHVLVTLHALPDTSVLRSKLLEHDNIVRYAEKLKTELIESGSSSSGPQFRSVPSSSTPRKGPSNW 279
[Close]
BLAST of g.arboreum_cottongen_reftransV1_0021584 vs. ExPASy TrEMBL
Match: A0A061GQ31_THECC (Metaxin-related isoform 1 OS=Theobroma cacao GN=TCM_039342 PE=4 SV=1)

HSP 1 Score: 447.588 bits (1150), Expect = 1.519e-152
Identity = 229/268 (85.45%), Postives = 246/268 (91.79%), Query Frame = 3 
Query:  114 MEQVAGEREAEEFTLVARKPYFDLPTACPICLPLFIYLKLAHFPFRLSFNSIFPDSDQIPYVESGTYVAYNNENSGVVECLKKDGIVDLDSEFQSAPDWVSIQAMINSWLADALTYELWVGTDGRSAYKIYYSDLSWPIGKVLFLKQVYSVKQRLGITKDNAEHREDEIYRRAKIAYGALSTKLGEQNFLFDDRPSSLDATFLGHVLVTLHALPDTSVLRSKVLEHDNIVRYAEKLKTELIEXXXXXXXXXXXXXXXXXTPRKGPSNW 917
            MEQV   REAEEFTLV RKPYFDLPTACP+CLP++IYLKLAH PF L FNS++PDSDQIPYVESGTYVAYNNEN GV+E LK+DGIVDLDSEFQS PDW+S++AMI+SWLADA+ YELWVG+DGRSA KIYYSDLSWPIGKVL LKQVY VKQRLGITKDNAE REDEIYRRAKIAYGALST+LGEQNFLFDDRPSSLDATFLGH LVTLH LP++SVLRSK+LEHDNIVRYAEKLK ELIESGSSSSGPQF SVPSSS PRK  SNW
Sbjct:    1 MEQVQA-REAEEFTLVTRKPYFDLPTACPLCLPVYIYLKLAHLPFHLEFNSVYPDSDQIPYVESGTYVAYNNENGGVIERLKQDGIVDLDSEFQSVPDWISMKAMISSWLADAIMYELWVGSDGRSANKIYYSDLSWPIGKVLLLKQVYIVKQRLGITKDNAEQREDEIYRRAKIAYGALSTRLGEQNFLFDDRPSSLDATFLGHALVTLHVLPESSVLRSKLLEHDNIVRYAEKLKMELIESGSSSSGPQFHSVPSSSAPRKDSSNW 267
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BLAST of g.arboreum_cottongen_reftransV1_0021584 vs. ExPASy TrEMBL
Match: A0A061GR24_THECC (Metaxin-related isoform 2 OS=Theobroma cacao GN=TCM_039342 PE=4 SV=1)

HSP 1 Score: 417.157 bits (1071), Expect = 9.284e-141
Identity = 219/268 (81.72%), Postives = 235/268 (87.69%), Query Frame = 3 
Query:  114 MEQVAGEREAEEFTLVARKPYFDLPTACPICLPLFIYLKLAHFPFRLSFNSIFPDSDQIPYVESGTYVAYNNENSGVVECLKKDGIVDLDSEFQSAPDWVSIQAMINSWLADALTYELWVGTDGRSAYKIYYSDLSWPIGKVLFLKQVYSVKQRLGITKDNAEHREDEIYRRAKIAYGALSTKLGEQNFLFDDRPSSLDATFLGHVLVTLHALPDTSVLRSKVLEHDNIVRYAEKLKTELIEXXXXXXXXXXXXXXXXXTPRKGPSNW 917
            MEQV   REAEEFTLV RKPYFDLPTACP+CLP++IYLKLAH PF L FNS++PDSDQIPYVESGTYVAYNNEN GV+E LK+DGIVDLDSEFQS PDW+S++AMI+SWLADA+ YELWVG+DGRSA KIYYSDLSWPIGKVL LKQVY VKQRLGITKDNAE REDEIYRRAKIAYGALST           RPSSLDATFLGH LVTLH LP++SVLRSK+LEHDNIVRYAEKLK ELIESGSSSSGPQF SVPSSS PRK  SNW
Sbjct:    1 MEQVQA-REAEEFTLVTRKPYFDLPTACPLCLPVYIYLKLAHLPFHLEFNSVYPDSDQIPYVESGTYVAYNNENGGVIERLKQDGIVDLDSEFQSVPDWISMKAMISSWLADAIMYELWVGSDGRSANKIYYSDLSWPIGKVLLLKQVYIVKQRLGITKDNAEQREDEIYRRAKIAYGALST-----------RPSSLDATFLGHALVTLHVLPESSVLRSKLLEHDNIVRYAEKLKMELIESGSSSSGPQFHSVPSSSAPRKDSSNW 256
[Close]
BLAST of g.arboreum_cottongen_reftransV1_0021584 vs. ExPASy TrEMBL
Match: A0A0D2QQR5_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_004G025600 PE=4 SV=1)

HSP 1 Score: 402.134 bits (1032), Expect = 2.217e-135
Identity = 215/222 (96.85%), Postives = 216/222 (97.30%), Query Frame = 3 
Query:  252 LSFNSIFPDSDQIPYVESGTYVAYNNENSGVVECLKKDGIVDLDSEFQSAPDWVSIQAMINSWLADALTYELWVGTDGRSAYKIYYSDLSWPIGKVLFLKQVYSVKQRLGITKDNAEHREDEIYRRAKIAYGALSTKLGEQNFLFDDRPSSLDATFLGHVLVTLHALPDTSVLRSKVLEHDNIVRYAEKLKTELIEXXXXXXXXXXXXXXXXXTPRKGPSNW 917
            L FN     SDQIPYVESGTYVAYNNENSGVVECLKKDGIVDLDSEFQSAPDWVSIQAMINSWLADALTYELWVGTDGRSAYKIYYSDLSWPIGKVLFLKQVYSVKQRLGITKDNAEHREDEIYRRAKIAYGALSTKLGEQNFLFDDRPSSLDATFLGHVLVTLHALPDTSVLRSK+LEHDNIVRYAEKLKTELIESGSSSSGPQFRSVPSSSTPRKGPSNW
Sbjct:    4 LFFNKFL--SDQIPYVESGTYVAYNNENSGVVECLKKDGIVDLDSEFQSAPDWVSIQAMINSWLADALTYELWVGTDGRSAYKIYYSDLSWPIGKVLFLKQVYSVKQRLGITKDNAEHREDEIYRRAKIAYGALSTKLGEQNFLFDDRPSSLDATFLGHVLVTLHALPDTSVLRSKLLEHDNIVRYAEKLKTELIESGSSSSGPQFRSVPSSSTPRKGPSNW 223
[Close]
BLAST of g.arboreum_cottongen_reftransV1_0021584 vs. ExPASy TrEMBL
Match: A0A067LDZ2_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_04566 PE=4 SV=1)

HSP 1 Score: 384.415 bits (986), Expect = 8.407e-128
Identity = 192/262 (73.28%), Postives = 222/262 (84.73%), Query Frame = 3 
Query:  135 REAEEFTLVARKPYFDLPTACPICLPLFIYLKLAHFPFRLSFNSIFPDSDQIPYVESGTYVAYNNENSGVVECLKKDGIVDLDSEFQSAPDWVSIQAMINSWLADALTYELWVGTDGRSAYKIYYSDLSWPIGKVLFLKQVYSVKQRLGITKDNAEHREDEIYRRAKIAYGALSTKLGEQNFLFDDRPSSLDATFLGHVLVTLHALPDTSVLRSKVLEHDNIVRYAEKLKTELIEXXXXXXXX-XXXXXXXXXTPRKGPSNW 917
            RE EE+TLVARKP F LPTACPICLP++IYLKLA FPFRL FNS +PDSDQIPYVESG YVAYNNEN GV++ LK+DGIV+LD+EF S P+W+S++AMINSWL DA+TYELW+G+ G SA+K YYSDL W IGK LF+KQ Y+VKQRLGITK+NAE RE EIY+RAKIAY ALST+LGEQ FLFDDR SSLDA FLGHVL T+ ALP+TSVLRS +LEH N+VRYAEK KT  +ES SSSS   +F    SSSTPR+GPSN+
Sbjct:    5 REREEYTLVARKPCFGLPTACPICLPVYIYLKLARFPFRLDFNSTYPDSDQIPYVESGVYVAYNNENGGVIQRLKEDGIVNLDAEFCSIPEWISLKAMINSWLLDAITYELWLGSAGSSAFKSYYSDLPWLIGKALFVKQTYTVKQRLGITKENAERREVEIYKRAKIAYAALSTRLGEQEFLFDDRASSLDAFFLGHVLYTIQALPETSVLRSSLLEHGNLVRYAEKFKTNFLESDSSSSSIPRFHPESSSSTPRRGPSNY 266
[Close]
BLAST of g.arboreum_cottongen_reftransV1_0021584 vs. ExPASy TrEMBL
Match: V4UK35_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10008916mg PE=4 SV=1)

HSP 1 Score: 377.867 bits (969), Expect = 2.641e-125
Identity = 191/268 (71.27%), Postives = 232/268 (86.57%), Query Frame = 3 
Query:  114 MEQVAGEREAEEFTLVARKPYFDLPTACPICLPLFIYLKLAHFPFRLSFNSIFPDSDQIPYVESGTYVAYNNENSGVVECLKKDGIVDLDSEFQSAPDWVSIQAMINSWLADALTYELWVGTDGRSAYKIYYSDLSWPIGKVLFLKQVYSVKQRLGITKDNAEHREDEIYRRAKIAYGALSTKLGEQNFLFDDRPSSLDATFLGHVLVTLHALPDTSVLRSKVLEHDNIVRYAEKLKTELIEXXXXXXXXXXXXXXXXXTPRKGPSNW 917
            ME+V    E E+FTLV RKPYF LPTACPICLP++IYLK A  PF L+F+S +PDSD IPYVES TYVA NNEN GV+ECLKKDGIVDLD+ +QS P+W+S++A+I+SWL +AL YELWVG+DG S  KIYYSDL+WPIGKVLFL+QV +VKQ+LGITK+N++ RE+EIY+RA IAY ALST+LGE++FLF++RPSS+DA  L HVLVTLHALP+TS+L+SK+LEH N+VRYAEKLKTE +E+GSSSS P F S PSSSTPRKGPS+W
Sbjct:    1 MERV---NEREDFTLVTRKPYFGLPTACPICLPVYIYLKFARLPFHLAFDSTYPDSDIIPYVESATYVACNNENGGVIECLKKDGIVDLDNGYQSVPEWISMKALISSWLEEALIYELWVGSDGNSVRKIYYSDLAWPIGKVLFLQQVRTVKQQLGITKENSDRREEEIYKRASIAYRALSTRLGEESFLFENRPSSVDAILLAHVLVTLHALPETSLLKSKLLEHGNLVRYAEKLKTEFVEAGSSSSIPPFPSDPSSSTPRKGPSHW 265
[Close]
BLAST of g.arboreum_cottongen_reftransV1_0021584 vs. ExPASy TrEMBL
Match: W9SGI3_9ROSA (Uncharacterized protein OS=Morus notabilis GN=L484_009206 PE=4 SV=1)

HSP 1 Score: 368.237 bits (944), Expect = 1.454e-121
Identity = 176/264 (66.67%), Postives = 215/264 (81.44%), Query Frame = 3 
Query:  123 VAGEREAEEFTLVARKPYFDLPTACPICLPLFIYLKLAHFPFRLSFNSIFPDSDQIPYVESGTYVAYNNENSGVVECLKKDGIVDLDSEFQSAPDWVSIQAMINSWLADALTYELWVGTDGRSAYKIYYSDLSWPIGKVLFLKQVYSVKQRLGITKDNAEHREDEIYRRAKIAYGALSTKLGEQNFLFDDRPSSLDATFLGHVLVTLHALPDTSVLRSKVLEHDNIVRYAEKLKTELIEXXXXXXXXXXXXXXXXXTPRKGPSN 914
            + GER  E +TLV R+P + LPTACP CLPL++YL+ A+ PF L FN ++PDSDQIPY+ESG YVAYNNE  GV+E +K DGI+DLD+E  S PDW+S +AM+ SWLADA+ YELWV +DG SA KIY SDL WPIGKVLFLKQ Y+VKQ+LGI KDNAE +E+EIYR+A IAYGALSTKLG+QNFLF++RPSSLDA  LG  L+T+HALP+TSVLRSK+LEHDN+VRYAE++KTE +++G S S P   +  SSST RKG S 
Sbjct:    1 MEGERARESYTLVVRRPCYGLPTACPECLPLYLYLRFANVPFHLDFNLVYPDSDQIPYIESGDYVAYNNEKGGVIERIKNDGIIDLDNELYSVPDWISTKAMLTSWLADAIKYELWVASDGSSAQKIYCSDLPWPIGKVLFLKQAYNVKQQLGICKDNAEQKEEEIYRKASIAYGALSTKLGDQNFLFENRPSSLDAIVLGQALITIHALPETSVLRSKLLEHDNLVRYAERIKTEFVDTGPSISVPHLHAESSSSTSRKGQSQ 264
[Close]
BLAST of g.arboreum_cottongen_reftransV1_0021584 vs. ExPASy TrEMBL
Match: A0A0A0LU72_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G423330 PE=4 SV=1)

HSP 1 Score: 357.451 bits (916), Expect = 3.416e-117
Identity = 175/265 (66.04%), Postives = 213/265 (80.38%), Query Frame = 3 
Query:  135 REAEEFTLVARKPYFDLPTACPICLPLFIYLKLAHFPFRLSFNSIFPDSDQIPYVESGTYVAYNNENSGVVECLKKDGIVDLDSEFQSAPDWVSIQAMINSWLADALTYELWVGTDGRSAYKIYYSDLSWPIGKVLFLKQVYSVKQRLGITKDNAEHREDEIYRRAKIAYGALSTKLGEQNFLFDDRPSSLDATFLGHVLVTLHALPDTSVLRSKVLEHDNIVRYAEKLKTELIEXXX----XXXXXXXXXXXXXXTPRKGPSNW 917
            R  E  TLV RKP F+LPT CP  LP++IYL+LA+  F L FN I+P+SD IPYVE+G YVAYNNE  GV+ECL++DGIVDLDSEF S P+WVS ++M++SWLADA+ YELW+GTDG SA K+YYSDL WPIGKVLFLK++YSVK +LGI K+NAE RE++IYR A +AYGALST+LGEQNFLF++RPSSLDA  LGH+L TL  LP+TSVLRSK+LEH N+VRYAEK  TEL+E G+      S  +  +  SSSTPR+GP NW
Sbjct:    4 RAEEGLTLVVRKPCFNLPTGCPDSLPVYIYLRLANLHFHLDFNLIYPESDIIPYVETGNYVAYNNEKGGVIECLRQDGIVDLDSEFLSLPEWVSAKSMVSSWLADAVMYELWLGTDGASASKVYYSDLPWPIGKVLFLKKLYSVKLQLGINKENAERREEQIYRNANLAYGALSTRLGEQNFLFENRPSSLDALVLGHLLFTLQVLPETSVLRSKLLEHSNLVRYAEKYMTELVEVGTSSSPLPSSSRSSTGASSSTPRRGPYNW 268
[Close]
BLAST of g.arboreum_cottongen_reftransV1_0021584 vs. ExPASy TrEMBL
Match: A0A059CL74_EUCGR (Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_C00132 PE=4 SV=1)

HSP 1 Score: 354.755 bits (909), Expect = 3.617e-116
Identity = 180/267 (67.42%), Postives = 214/267 (80.15%), Query Frame = 3 
Query:  123 VAGEREAE-EFTLVARKPYFDLPTACPICLPLFIYLKLAHFPFRLSFNSIFPDSDQIPYVESGTYVAYNNENSGVVECLKKDGIVDLDSEFQSAPDWVSIQAMINSWLADALTYELWVGTDGRSAYKIYYSDLSWPIGKVLFLKQVYSVKQRLGITKDNAEHREDEIYRRAKIAYGALSTKLGEQNFLFDDRPSSLDATFLGHVLVTLHALPDTSVLRSKVLEHDNIVRYAEKLKTELIEXXXXXXXXXXXXXXXXXT-PRKGPSNW 917
            + G  E E EFTLVARKP F LPTACP CLP+FIYLKLA  PFRL FN  FPDSDQ+PYVESG YVAYNNE  GV+E LK+DGIVDLD E +S P+++S +AMI+SWL +A+ YELWVG+DG SA+ IYY+DL WP+GK+L+LKQ+ SVKQ LGITKDNAE RE EIYRRAKIAY ALST LGE N+ F  RPSSLDA FLGH L TL ALP+ S+LR+++LEH N+VRYAEK K+E +E+GSSSS        SS++ PR+GPS+W
Sbjct:    1 MEGASETEREFTLVARKPCFGLPTACPHCLPVFIYLKLAKIPFRLDFNLTFPDSDQVPYVESGAYVAYNNEKGGVIESLKEDGIVDLDLELRSVPEFISSKAMISSWLEEAIIYELWVGSDGTSAHNIYYADLPWPVGKLLYLKQIRSVKQHLGITKDNAERREAEIYRRAKIAYEALSTMLGE-NYFFFGRPSSLDAFFLGHALFTLQALPEASLLRNRLLEHGNLVRYAEKHKSECLEAGSSSSSDMHFPPSSSASAPRQGPSHW 266
[Close]
BLAST of g.arboreum_cottongen_reftransV1_0021584 vs. ExPASy Swiss-Prot
Match: MTX_ARATH (Mitochondrial outer membrane import complex protein METAXIN OS=Arabidopsis thaliana GN=MTX1 PE=1 SV=1)

HSP 1 Score: 340.887 bits (873), Expect = 7.141e-113
Identity = 161/237 (67.93%), Postives = 191/237 (80.59%), Query Frame = 3 
Query:  129 GEREAEEFTLVARKPYFDLPTACPICLPLFIYLKLAHFPFRLSFNSIFPDSDQIPYVESGTYVAYNNENSGVVECLKKDGIVDLDSEFQSAPDWVSIQAMINSWLADALTYELWVGTDGRSAYKIYYSDLSWPIGKVLFLKQVYSVKQRLGITKDNAEHREDEIYRRAKIAYGALSTKLGEQNFLFDDRPSSLDATFLGHVLVTLHALPDTSVLRSKVLEHDNIVRYAEKLKTELIE 839
            G++E   +TLVARKP FDLPTACP CLP +IYLKLA  PF L+FNS FPDSD++PY ES TYVAYNNE+ GV+E LKKDGIV+LDS+ QS  D++S++A+I SWL +ALTYE+WVGT+G S  KIYYSDL W I KVLF KQ Y  K RLGITK+NAE RE +IY+RA  AY ALST+LGEQ FLF+DRPSSLDA  L H+L  + ALP TSVLR K+LEH N+VRYAEKLK+E +E
Sbjct:    3 GDQETNVYTLVARKPSFDLPTACPNCLPAYIYLKLAQLPFELAFNSTFPDSDELPYFESDTYVAYNNEDGGVIEKLKKDGIVNLDSQLQSLSDYLSLKALIVSWLEEALTYEIWVGTEGISTSKIYYSDLPWVISKVLFYKQTYLAKNRLGITKENAEQREKQIYKRASEAYEALSTRLGEQKFLFEDRPSSLDAFLLSHILFIIQALPVTSVLRCKLLEHSNLVRYAEKLKSEFLE 239
[Close]
BLAST of g.arboreum_cottongen_reftransV1_0021584 vs. ExPASy Swiss-Prot
Match: MTX2_HUMAN (Metaxin-2 OS=Homo sapiens GN=MTX2 PE=1 SV=1)

HSP 1 Score: 60.8474 bits (146), Expect = 3.952e-9
Identity = 51/221 (23.08%), Postives = 97/221 (43.89%), Query Frame = 3 
Query:  207 LPLFIYLKLAHFPFRLSFNS---IFPDSDQIPYVESGTYVAYNNENSGVVECLKKDG--IVDLDSEFQSAPDWVSIQAMINSWLADALTYELWV--GTDGRSAYKIYYSDLSWPIGKVLFLKQVYSVKQRL---GITKDNAEHREDEIYRRAKIAYGALSTKLGEQNFLFDDRPSSLDATFLGHVLVTLHALPDTSVLRSKVLEHDNIVRYAEKLKTELIE 839
            L +  +L++ + P ++   +       S ++P++  G  V   +E   +V+ +K  G  + D   E Q A +  +   ++N+ L  A  Y  W    T G   +  Y S   WP+  +L  ++ + VK+++   G  K       D++         ALS +LG Q + F+ +P+ LDA   GH+   L        L  KV  + N++ +  +++    E
Sbjct:   42 LAVQAFLQMCNLPIKVVCRANAEYMSPSGKVPFIHVGNQVV--SELGPIVQFVKAKGHSLSDGLEEVQKA-EMKAYMELVNNMLLTAELYLQWCDEATVGEITHARYGSPYPWPLNHILAYQKQWEVKRKMKAIGWGKKTL----DQVLEDVDQCCQALSQRLGTQPYFFNKQPTELDALVFGHLYTILTTQLTNDELSEKVKNYSNLLAFCRRIEQHYFE 255
[Close]
BLAST of g.arboreum_cottongen_reftransV1_0021584 vs. ExPASy Swiss-Prot
Match: MTX2_PIG (Metaxin-2 OS=Sus scrofa GN=MTX2 PE=2 SV=1)

HSP 1 Score: 60.077 bits (144), Expect = 6.538e-9
Identity = 51/219 (23.29%), Postives = 97/219 (44.29%), Query Frame = 3 
Query:  207 LPLFIYLKLAHFPFRLSFNS---IFPDSDQIPYVESGTYVAYNNENSGVVECLKKDG--IVDLDSEFQSAPDWVSIQAMINSWLADALTYELWV--GTDGRSAYKIYYSDLSWPIGKVLFLKQVYSVKQRL-GITKDNAEHREDEIYRRAKIAYGALSTKLGEQNFLFDDRPSSLDATFLGHVLVTLHALPDTSVLRSKVLEHDNIVRYAEKLKTELIE 839
            L +  +L++ + P ++   +       S ++P++  G  V   +E   +V+ +K  G  + D   E Q A +  +   ++N+ L  A  Y  W    T G   +  Y S   WP+  +L  ++ + VK+++  I   N     D++         ALS +LG Q + F+ +P+ LDA   GH+   L        L  KV  + N++ +  +++    E
Sbjct:   42 LAVQAFLQMCNLPIKVVCRANAEYMSPSGKVPFIHVGNQVV--SELGPIVQFVKAKGHSLSDGLDEVQKA-EMKAYMELVNNMLLTAELYLQWCDEATVGEITHARYGSPYPWPLNHILAYQKQWEVKRKMKAIGWGN--KTLDQVLEDVDQCCQALSQRLGTQPYFFNKQPTELDALVFGHLYTILTTQLTNDELSEKVKNYSNLLAFCRRIEQHYFE 255
[Close]
BLAST of g.arboreum_cottongen_reftransV1_0021584 vs. ExPASy Swiss-Prot
Match: MTX2_MOUSE (Metaxin-2 OS=Mus musculus GN=Mtx2 PE=1 SV=1)

HSP 1 Score: 59.3066 bits (142), Expect = 1.354e-8
Identity = 51/219 (23.29%), Postives = 97/219 (44.29%), Query Frame = 3 
Query:  207 LPLFIYLKLAHFPFRLSFNS---IFPDSDQIPYVESGTYVAYNNENSGVVECLKKDG--IVDLDSEFQSAPDWVSIQAMINSWLADALTYELWV--GTDGRSAYKIYYSDLSWPIGKVLFLKQVYSVKQRL-GITKDNAEHREDEIYRRAKIAYGALSTKLGEQNFLFDDRPSSLDATFLGHVLVTLHALPDTSVLRSKVLEHDNIVRYAEKLKTELIE 839
            L +  +L++ + P ++   +       S ++P++  G  V   +E   +V+ +K  G  + D   E Q A +  +   ++N+ L  A  Y  W    T G      Y S   WP+  +L  ++ + VK+++  I   N     D++         ALS +LG Q + F+ +P+ LDA   GH+   L     +  L  KV  + N++ +  +++    E
Sbjct:   42 LAVQAFLQMCNLPVKVVCRANAEYMSPSGKVPFIHVGNQVV--SELGPIVQFVKAKGHSLSDGLDEVQKA-EMKAYMELVNNMLLTAELYLQWCDEATVGEITIARYGSPYPWPLNHILAYQKQWEVKRKMKAIGWGN--KTLDQVLEDVDQCCQALSQRLGTQPYFFNKQPTELDALVFGHLYTILTTQLTSDELSEKVKNYSNLLAFCRRIEQHYFE 255
[Close]
BLAST of g.arboreum_cottongen_reftransV1_0021584 vs. ExPASy Swiss-Prot
Match: FAXC_RAT (Failed axon connections homolog OS=Rattus norvegicus GN=Faxc PE=3 SV=1)

HSP 1 Score: 59.3066 bits (142), Expect = 2.419e-8
Identity = 57/234 (24.36%), Postives = 99/234 (42.31%), Query Frame = 3 
Query:  168 KPYFDLPTACPICLPLFIYLKLAHFPFRLSFNSIFPDSDQIPYVESGTYVAYNNEN-SG---VVECLKKDGIVDLDSEFQSAPDWVS--IQAMINSWLADALTYELWVGTDGRSAYKIYYSDLSWPIGKVLFLKQVYSVKQRLGITKDN------AEHREDEIYRRAKIAYGALSTKLGEQNFLFDDRPSSLDATFLGHVLVTLHALPDTSVLRSKVLEHDNIVRYAEKLKTEL 833
            +P   +P+  P CL +  YL++A  P++  F        ++P++E      YNNE  SG   +++ L++   V+L+         VS  +  M+       L Y  WV     +   +  S    P   +L     +  K   GI K            E+EIY   +    +L+  LG++ ++   + S+LDAT  GH+   +  LP T   R    E  N+  Y E+++ + 
Sbjct:  107 RPNNGVPSLSPFCLKMETYLRMADLPYQNYFGGKLSAQGKMPWIE------YNNEKVSGTEFIIDFLEEKLGVNLNKNLGPHERAVSRAVTKMVEEHFYWTLAYCQWVDNLNETRKMLSLSGGG-PFSNLLRWVVCHITK---GIVKREMHGHGIGRFSEEEIYMLMEKDMRSLAGLLGDKKYIMGPKLSTLDATVFGHLAQAMWTLPGTRPERLIKGELINLAMYCERIRRKF 330
[Close]
BLAST of g.arboreum_cottongen_reftransV1_0021584 vs. ExPASy Swiss-Prot
Match: FAXC_MOUSE (Failed axon connections homolog OS=Mus musculus GN=Faxc PE=2 SV=1)

HSP 1 Score: 59.3066 bits (142), Expect = 2.620e-8
Identity = 57/234 (24.36%), Postives = 99/234 (42.31%), Query Frame = 3 
Query:  168 KPYFDLPTACPICLPLFIYLKLAHFPFRLSFNSIFPDSDQIPYVESGTYVAYNNEN-SG---VVECLKKDGIVDLDSEFQSAPDWVS--IQAMINSWLADALTYELWVGTDGRSAYKIYYSDLSWPIGKVLFLKQVYSVKQRLGITKDN------AEHREDEIYRRAKIAYGALSTKLGEQNFLFDDRPSSLDATFLGHVLVTLHALPDTSVLRSKVLEHDNIVRYAEKLKTEL 833
            +P   +P+  P CL +  YL++A  P++  F        ++P++E      YNNE  SG   +++ L++   V+L+         VS  +  M+       L Y  WV     +   +  S    P   +L     +  K   GI K            E+EIY   +    +L+  LG++ ++   + S+LDAT  GH+   +  LP T   R    E  N+  Y E+++ + 
Sbjct:  107 RPNNGVPSLSPFCLKMETYLRMADLPYQNYFGGKLSAQGKMPWIE------YNNEKVSGTEFIIDFLEEKLGVNLNKSLGPHERAVSRAVTKMVEEHFYWTLAYCQWVDNLNETRKMLSLSGGG-PFSNLLRWVVCHITK---GIVKREMHGHGIGRFSEEEIYMLMEKDMRSLAGLLGDKKYIMGPKLSTLDATVFGHLAQAMWTLPGTRPERLIKGELINLAMYCERIRRKF 330
[Close]
BLAST of g.arboreum_cottongen_reftransV1_0021584 vs. ExPASy Swiss-Prot
Match: MTX3_DANRE (Metaxin-3 OS=Danio rerio GN=mtx3 PE=2 SV=2)

HSP 1 Score: 56.6102 bits (135), Expect = 1.240e-7
Identity = 60/240 (25.00%), Postives = 99/240 (41.25%), Query Frame = 3 
Query:  141 AEEFTLVARKPYFDLPTACPICLPLFIYLKLAHFPFRLSF-----NSIFPDSDQIPYVESGTYVAYNNENSGVVECLKKDGI-VDLDSEFQSAPDWVSIQAMINSWLADALTYELWVGTDGRS--AYKIYYSDLSWPIGKVLFLKQVYSVKQRLGITKD-----NAEHREDEIYRRAKIAYGALSTKLGEQNFLFDDRPSSLDATFLGHVLVTLHALPDTSVLRSKVLEHDNIVRYAEKL 821
            AE   L+     +DLP+     L +  Y K A     + F      +I     QI Y   GT V    E + ++  L+K     D +   +   D ++  A++   L  AL +  WV  +  +      + S   +P+   +  +Q      R+ +TK      N    E +IY  AK     LS +LG  NF F D P+SLDA   GH+   + A   +  L+  + + DN+ ++   +
Sbjct:    2 AEPIELLCWGGDWDLPSVQTDSLTVLAYAKFAGAELTVKFVDWTWRTITASVPQIHY--EGTTVT---EPTQILNFLRKQRFNADFELTAKQGADTMAYIALLEEKLRPALLHTFWVDAENYANLTRPWFTSHSPFPLNFFVPGRQASLALSRILLTKAESPLLNITEVEGKIYSEAKECLNLLSHRLGNFNFFFGDTPTSLDAFVFGHIAPLIKAPLPSGQLQKHLNQLDNLCQFCNTI 236
[Close]
BLAST of g.arboreum_cottongen_reftransV1_0021584 vs. ExPASy Swiss-Prot
Match: FAXC_HUMAN (Failed axon connections homolog OS=Homo sapiens GN=FAXC PE=2 SV=2)

HSP 1 Score: 56.6102 bits (135), Expect = 1.679e-7
Identity = 55/234 (23.50%), Postives = 99/234 (42.31%), Query Frame = 3 
Query:  168 KPYFDLPTACPICLPLFIYLKLAHFPFRLSFNSIFPDSDQIPYVESGTYVAYNNEN-SG---VVECLKKDGIVDLDSEFQSAPDWVS--IQAMINSWLADALTYELWVGTDGRSAYKIYYSDLSWPIGKVLFLKQVYSVKQRLGITKDN------AEHREDEIYRRAKIAYGALSTKLGEQNFLFDDRPSSLDATFLGHVLVTLHALPDTSVLRSKVLEHDNIVRYAEKLKTEL 833
            +P   +P+  P CL +  YL++A  P++  F        ++P++E      YN+E  SG   +++ L++   V+L+         +S  +  M+       L Y  WV     +   +  S    P   +L     +  K   GI K            E+EIY   +    +L+  LG++ ++   + S+LDAT  GH+   +  LP T   R    E  N+  Y E+++ + 
Sbjct:  107 RPNNGVPSLSPFCLKMETYLRMADLPYQNYFGGKLSAQGKMPWIE------YNHEKVSGTEFIIDFLEEKLGVNLNKNLGPHERAISRAVTKMVEEHFYWTLAYCQWVDNLNETRKMLSLSGGG-PFSNLLRWVVCHITK---GIVKREMHGHGIGRFSEEEIYMLMEKDMRSLAGLLGDKKYIMGPKLSTLDATVFGHLAQAMWTLPGTRPERLIKGELINLAMYCERIRRKF 330
[Close]
BLAST of g.arboreum_cottongen_reftransV1_0021584 vs. ExPASy Swiss-Prot
Match: FAXC_XENTR (Failed axon connections homolog OS=Xenopus tropicalis GN=faxc PE=3 SV=1)

HSP 1 Score: 55.0694 bits (131), Expect = 5.959e-7
Identity = 50/225 (22.22%), Postives = 95/225 (42.22%), Query Frame = 3 
Query:  168 KPYFDLPTACPICLPLFIYLKLAHFPFRLSFNSIFPDSDQIPYVESGTYVAYNNEN-SG---VVECLKKDGIVDLDSEFQSAPDWVS--IQAMINSWLADALTYELWVGTDGRSAYKIYYSDLSWPIGKVLFLKQVYSVKQRLGITKDNAEHREDEIYRRAKIAYGALSTKLGEQNFLFDDRPSSLDATFLGHVLVTLHALPDTSVLRSKVLEHDNIVRYAEKLK 824
            +P   +P+  P CL +  YL++A  P++  F+       ++P++E      YN+   SG   +++ L++   V+L+         VS  +  M+       L Y  WV     +   +  +     + K +       + +R    +      E+EIYR  +    +L+  LG++ +L   + S+LDAT  GH+   L     T        E  N+  Y E+++
Sbjct:  106 RPNNGVPSLSPFCLKIETYLRMADLPYQNYFDGKLSPQGKMPWIE------YNHTRVSGTEFIIDFLEEKLGVNLNKHLNPHQRAVSRAVTKMVEEHFYWTLAYCQWVENLDETQKMLNITGPLSDLLKWILCHLTKGIVKREMYGQGIGRFSEEEIYRLMEKDMRSLAGLLGDKKYLMGPKFSTLDATVFGHIANALWGTQGTYKEEGIAGELINLAMYCERIR 324
The following BLAST results are available for this feature:
BLAST of g.arboreum_cottongen_reftransV1_0021584 vs. ExPASy TrEMBL
Analysis Date: 2016-11-15 (Homology Analysis for Gossypium arboreum CottonGen RefTrans V1 vs TrEMBL)
Total hits: 25
Match NameE-valueIdentityDescription
A0A0D2RSD4_GOSRA1.803e-17898.51Uncharacterized protein OS=Gossypium raimondii GN=... [more]
A0A0D2QY37_GOSRA7.190e-17594.62Uncharacterized protein OS=Gossypium raimondii GN=... [more]
A0A061GQ31_THECC1.519e-15285.45Metaxin-related isoform 1 OS=Theobroma cacao GN=TC... [more]
A0A061GR24_THECC9.284e-14181.72Metaxin-related isoform 2 OS=Theobroma cacao GN=TC... [more]
A0A0D2QQR5_GOSRA2.217e-13596.85Uncharacterized protein OS=Gossypium raimondii GN=... [more]
A0A067LDZ2_JATCU8.407e-12873.28Uncharacterized protein OS=Jatropha curcas GN=JCGZ... [more]
V4UK35_9ROSI2.641e-12571.27Uncharacterized protein OS=Citrus clementina GN=CI... [more]
W9SGI3_9ROSA1.454e-12166.67Uncharacterized protein OS=Morus notabilis GN=L484... [more]
A0A0A0LU72_CUCSA3.416e-11766.04Uncharacterized protein OS=Cucumis sativus GN=Csa_... [more]
A0A059CL74_EUCGR3.617e-11667.42Uncharacterized protein OS=Eucalyptus grandis GN=E... [more]

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BLAST of g.arboreum_cottongen_reftransV1_0021584 vs. ExPASy Swiss-Prot
Analysis Date: 2016-11-15 (Homology Analysis for Gossypium arboreum CottonGen RefTrans V1 vs SwissProt)
Total hits: 9
Match NameE-valueIdentityDescription
MTX_ARATH7.141e-11367.93Mitochondrial outer membrane import complex protei... [more]
MTX2_HUMAN3.952e-923.08Metaxin-2 OS=Homo sapiens GN=MTX2 PE=1 SV=1[more]
MTX2_PIG6.538e-923.29Metaxin-2 OS=Sus scrofa GN=MTX2 PE=2 SV=1[more]
MTX2_MOUSE1.354e-823.29Metaxin-2 OS=Mus musculus GN=Mtx2 PE=1 SV=1[more]
FAXC_RAT2.419e-824.36Failed axon connections homolog OS=Rattus norvegic... [more]
FAXC_MOUSE2.620e-824.36Failed axon connections homolog OS=Mus musculus GN... [more]
MTX3_DANRE1.240e-725.00Metaxin-3 OS=Danio rerio GN=mtx3 PE=2 SV=2[more]
FAXC_HUMAN1.679e-723.50Failed axon connections homolog OS=Homo sapiens GN... [more]
FAXC_XENTR5.959e-722.22Failed axon connections homolog OS=Xenopus tropica... [more]
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InterPro
Analysis Name: InterProScan analysis for Gossypium arboreum CottonGen RefTrans V1
Date Performed: 2016-11-14
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR033468Metaxin, glutathione S-transferase domainPFAMPF17171GST_C_6coord: 197..259
e-value: 3.7E-16
score: 58.5
IPR017410Mitochondrial outer membrane transport complex protein, metaxinPIRSFPIRSF038150Metaxincoord: 33..349
e-value: 4.0E-100
score: 332.5
IPR012336Thioredoxin-like foldPFAMPF17172GST_N_4coord: 53..145
e-value: 1.6E-16
score: 60.7
NoneNo IPR availablePANTHERPTHR12289:SF38METAXIN-2coord: 18..348
NoneNo IPR availablePANTHERPTHR12289METAXIN RELATEDcoord: 18..348
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 317..336
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 337..353
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..316
NoneNo IPR availableTMHMMTMhelixcoord: 317..336

Sequences
The following sequences are available for this feature:

contig sequence

>g.arboreum_cottongen_reftransV1_0021584 ID=g.arboreum_cottongen_reftransV1_0021584; Name=g.arboreum_cottongen_reftransV1_0021584; organism=Gossypium arboreum; type=contig; length=1262bp
AAACGCTTTGTTAAACCCCTACTCTCAAAACTCTTTTCAGCTTGCTCTGG
TATTTTTACCCATCGGAGCAAATTACAAACAGCCATAGCTGCTTAGTGAA
AAAGAAAAAGAAAATGGAGCAAGTGGCGGGTGAAAGGGAAGCCGAAGAGT
TCACACTGGTCGCAAGGAAGCCTTACTTCGATCTCCCAACTGCGTGCCCT
ATTTGTTTGCCGCTTTTCATTTATCTCAAGCTTGCCCACTTTCCCTTTCG
TTTATCTTTCAATTCAATCTTCCCTGATTCAGATCAAATTCCTTATGTTG
AATCTGGTACTTACGTTGCCTACAACAACGAGAATAGTGGGGTTGTTGAG
TGTTTAAAGAAAGATGGTATCGTTGATCTGGACTCTGAATTCCAATCTGC
CCCAGATTGGGTATCGATACAAGCTATGATTAACTCTTGGTTAGCTGATG
CATTGACGTACGAACTATGGGTGGGTACCGATGGAAGATCAGCCTACAAG
ATTTATTATTCTGATCTTTCATGGCCAATAGGAAAAGTTCTTTTCCTAAA
GCAAGTGTATAGTGTTAAACAACGTCTTGGAATTACTAAAGACAATGCCG
AACACAGAGAAGATGAGATTTACAGGAGAGCAAAAATTGCTTATGGTGCT
CTATCTACTAAGTTAGGAGAACAGAACTTCCTCTTTGATGATAGGCCATC
AAGCTTGGATGCAACTTTTCTCGGACATGTTCTTGTCACCCTTCATGCAC
TACCTGACACGTCAGTGCTCCGAAGCAAAGTCTTGGAGCATGACAATATT
GTCAGATATGCCGAAAAACTTAAAACGGAGTTGATAGAGTCTGGTTCATC
ATCTTCTGGTCCACAATTTCGCTCAGTCCCTTCATCGTCAACTCCGAGAA
AAGGTCCCTCAAATTGGAGTTCAAAGCCGAAGAGCAAGCCAAAAAGGGAG
AAAACAGAGGAGGAGAAAACTTTTAAGAGGAGGGCAAAATATTTTCTAGC
TGCACAGCTACTTGCGGTTCTGCTTTTCCTCTCCATGATGGGCGGTTATG
ATTCTGGTGACCTGGAGCTCGACGACGAAGATGAAGGCATCTCTTTCAAT
TGAAACAAATCTCTCAGTTACCGGGTACTCATTACTGACATTTTTCCCAT
TATTAGTGACAATGTTAGTGATCTGTTGAGGTTGAGCTATTAGTATTTGC
ATTAACATTGTGGTAAAAAATAAGAACATACATTTAAAGATTTGATTTAT
ACAATATTTACG
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Annotated Terms
The following terms have been associated with this contig:
Vocabulary: INTERPRO
TermDefinition
IPR033468Metaxin_GST
IPR017410Metaxin1/3
IPR012336Thioredoxin-like_fold
Vocabulary: Biological Process
TermDefinition
GO:0006626protein targeting to mitochondrion
Vocabulary: Cellular Component
TermDefinition
GO:0005741mitochondrial outer membrane