g.arboreum_cottongen_reftransV1_0021584, g.arboreum_cottongen_reftransV1_0021584 (contig) Gossypium arboreum
Overview
Alignments
The following features are aligned
Analyses
This contig is derived from or has results from the following analyses
Homology
BLAST of g.arboreum_cottongen_reftransV1_0021584 vs. ExPASy TrEMBL
Match: A0A0D2RSD4_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_004G025600 PE=4 SV=1) HSP 1 Score: 513.457 bits (1321), Expect = 1.803e-178 Identity = 264/268 (98.51%), Postives = 266/268 (99.25%), Query Frame = 3 Query: 114 MEQVAGEREAEEFTLVARKPYFDLPTACPICLPLFIYLKLAHFPFRLSFNSIFPDSDQIPYVESGTYVAYNNENSGVVECLKKDGIVDLDSEFQSAPDWVSIQAMINSWLADALTYELWVGTDGRSAYKIYYSDLSWPIGKVLFLKQVYSVKQRLGITKDNAEHREDEIYRRAKIAYGALSTKLGEQNFLFDDRPSSLDATFLGHVLVTLHALPDTSVLRSKVLEHDNIVRYAEKLKTELIEXXXXXXXXXXXXXXXXXTPRKGPSNW 917 MEQV GEREAEEFT+VARKPYF LPTACPICLPLFIYLKLAHFPFRLSFNSIFPDSDQIPYVESGTYVAYNNENSGVVECLKKDGIVDLDSEFQSAPDWVSIQAMINSWLADALTYELWVGTDGRSAYKIYYSDLSWPIGKVLFLKQVYSVKQRLGITKDNAEHREDEIYRRAKIAYGALSTKLGEQNFLFDDRPSSLDATFLGHVLVTLHALPDTSVLRSK+LEHDNIVRYAEKLKTELIESGSSSSGPQFRSVPSSSTPRKGPSNW Sbjct: 1 MEQVVGEREAEEFTVVARKPYFGLPTACPICLPLFIYLKLAHFPFRLSFNSIFPDSDQIPYVESGTYVAYNNENSGVVECLKKDGIVDLDSEFQSAPDWVSIQAMINSWLADALTYELWVGTDGRSAYKIYYSDLSWPIGKVLFLKQVYSVKQRLGITKDNAEHREDEIYRRAKIAYGALSTKLGEQNFLFDDRPSSLDATFLGHVLVTLHALPDTSVLRSKLLEHDNIVRYAEKLKTELIESGSSSSGPQFRSVPSSSTPRKGPSNW 268
BLAST of g.arboreum_cottongen_reftransV1_0021584 vs. ExPASy TrEMBL
Match: A0A0D2QY37_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_004G025600 PE=4 SV=1) HSP 1 Score: 504.597 bits (1298), Expect = 7.190e-175 Identity = 264/279 (94.62%), Postives = 266/279 (95.34%), Query Frame = 3 Query: 114 MEQVAGEREAEEFTLVARKPYFDLPTACPICLPLFIYLKLAHFPFRLSFNSIFPDSDQIPYVESGTYVAYNNENSGVVECLKKDGIVDLDSEFQSAPDWVSIQAMINSWLADALTYELWVGTDGRSAYKIYYSDLSWPIGKVLFLKQVYSVKQRLGITKDNAEHREDE-----------IYRRAKIAYGALSTKLGEQNFLFDDRPSSLDATFLGHVLVTLHALPDTSVLRSKVLEHDNIVRYAEKLKTELIEXXXXXXXXXXXXXXXXXTPRKGPSNW 917 MEQV GEREAEEFT+VARKPYF LPTACPICLPLFIYLKLAHFPFRLSFNSIFPDSDQIPYVESGTYVAYNNENSGVVECLKKDGIVDLDSEFQSAPDWVSIQAMINSWLADALTYELWVGTDGRSAYKIYYSDLSWPIGKVLFLKQVYSVKQRLGITKDNAEHREDE IYRRAKIAYGALSTKLGEQNFLFDDRPSSLDATFLGHVLVTLHALPDTSVLRSK+LEHDNIVRYAEKLKTELIESGSSSSGPQFRSVPSSSTPRKGPSNW Sbjct: 1 MEQVVGEREAEEFTVVARKPYFGLPTACPICLPLFIYLKLAHFPFRLSFNSIFPDSDQIPYVESGTYVAYNNENSGVVECLKKDGIVDLDSEFQSAPDWVSIQAMINSWLADALTYELWVGTDGRSAYKIYYSDLSWPIGKVLFLKQVYSVKQRLGITKDNAEHREDENCTSLYSICGQIYRRAKIAYGALSTKLGEQNFLFDDRPSSLDATFLGHVLVTLHALPDTSVLRSKLLEHDNIVRYAEKLKTELIESGSSSSGPQFRSVPSSSTPRKGPSNW 279
BLAST of g.arboreum_cottongen_reftransV1_0021584 vs. ExPASy TrEMBL
Match: A0A061GQ31_THECC (Metaxin-related isoform 1 OS=Theobroma cacao GN=TCM_039342 PE=4 SV=1) HSP 1 Score: 447.588 bits (1150), Expect = 1.519e-152 Identity = 229/268 (85.45%), Postives = 246/268 (91.79%), Query Frame = 3 Query: 114 MEQVAGEREAEEFTLVARKPYFDLPTACPICLPLFIYLKLAHFPFRLSFNSIFPDSDQIPYVESGTYVAYNNENSGVVECLKKDGIVDLDSEFQSAPDWVSIQAMINSWLADALTYELWVGTDGRSAYKIYYSDLSWPIGKVLFLKQVYSVKQRLGITKDNAEHREDEIYRRAKIAYGALSTKLGEQNFLFDDRPSSLDATFLGHVLVTLHALPDTSVLRSKVLEHDNIVRYAEKLKTELIEXXXXXXXXXXXXXXXXXTPRKGPSNW 917 MEQV REAEEFTLV RKPYFDLPTACP+CLP++IYLKLAH PF L FNS++PDSDQIPYVESGTYVAYNNEN GV+E LK+DGIVDLDSEFQS PDW+S++AMI+SWLADA+ YELWVG+DGRSA KIYYSDLSWPIGKVL LKQVY VKQRLGITKDNAE REDEIYRRAKIAYGALST+LGEQNFLFDDRPSSLDATFLGH LVTLH LP++SVLRSK+LEHDNIVRYAEKLK ELIESGSSSSGPQF SVPSSS PRK SNW Sbjct: 1 MEQVQA-REAEEFTLVTRKPYFDLPTACPLCLPVYIYLKLAHLPFHLEFNSVYPDSDQIPYVESGTYVAYNNENGGVIERLKQDGIVDLDSEFQSVPDWISMKAMISSWLADAIMYELWVGSDGRSANKIYYSDLSWPIGKVLLLKQVYIVKQRLGITKDNAEQREDEIYRRAKIAYGALSTRLGEQNFLFDDRPSSLDATFLGHALVTLHVLPESSVLRSKLLEHDNIVRYAEKLKMELIESGSSSSGPQFHSVPSSSAPRKDSSNW 267
BLAST of g.arboreum_cottongen_reftransV1_0021584 vs. ExPASy TrEMBL
Match: A0A061GR24_THECC (Metaxin-related isoform 2 OS=Theobroma cacao GN=TCM_039342 PE=4 SV=1) HSP 1 Score: 417.157 bits (1071), Expect = 9.284e-141 Identity = 219/268 (81.72%), Postives = 235/268 (87.69%), Query Frame = 3 Query: 114 MEQVAGEREAEEFTLVARKPYFDLPTACPICLPLFIYLKLAHFPFRLSFNSIFPDSDQIPYVESGTYVAYNNENSGVVECLKKDGIVDLDSEFQSAPDWVSIQAMINSWLADALTYELWVGTDGRSAYKIYYSDLSWPIGKVLFLKQVYSVKQRLGITKDNAEHREDEIYRRAKIAYGALSTKLGEQNFLFDDRPSSLDATFLGHVLVTLHALPDTSVLRSKVLEHDNIVRYAEKLKTELIEXXXXXXXXXXXXXXXXXTPRKGPSNW 917 MEQV REAEEFTLV RKPYFDLPTACP+CLP++IYLKLAH PF L FNS++PDSDQIPYVESGTYVAYNNEN GV+E LK+DGIVDLDSEFQS PDW+S++AMI+SWLADA+ YELWVG+DGRSA KIYYSDLSWPIGKVL LKQVY VKQRLGITKDNAE REDEIYRRAKIAYGALST RPSSLDATFLGH LVTLH LP++SVLRSK+LEHDNIVRYAEKLK ELIESGSSSSGPQF SVPSSS PRK SNW Sbjct: 1 MEQVQA-REAEEFTLVTRKPYFDLPTACPLCLPVYIYLKLAHLPFHLEFNSVYPDSDQIPYVESGTYVAYNNENGGVIERLKQDGIVDLDSEFQSVPDWISMKAMISSWLADAIMYELWVGSDGRSANKIYYSDLSWPIGKVLLLKQVYIVKQRLGITKDNAEQREDEIYRRAKIAYGALST-----------RPSSLDATFLGHALVTLHVLPESSVLRSKLLEHDNIVRYAEKLKMELIESGSSSSGPQFHSVPSSSAPRKDSSNW 256
BLAST of g.arboreum_cottongen_reftransV1_0021584 vs. ExPASy TrEMBL
Match: A0A0D2QQR5_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_004G025600 PE=4 SV=1) HSP 1 Score: 402.134 bits (1032), Expect = 2.217e-135 Identity = 215/222 (96.85%), Postives = 216/222 (97.30%), Query Frame = 3 Query: 252 LSFNSIFPDSDQIPYVESGTYVAYNNENSGVVECLKKDGIVDLDSEFQSAPDWVSIQAMINSWLADALTYELWVGTDGRSAYKIYYSDLSWPIGKVLFLKQVYSVKQRLGITKDNAEHREDEIYRRAKIAYGALSTKLGEQNFLFDDRPSSLDATFLGHVLVTLHALPDTSVLRSKVLEHDNIVRYAEKLKTELIEXXXXXXXXXXXXXXXXXTPRKGPSNW 917 L FN SDQIPYVESGTYVAYNNENSGVVECLKKDGIVDLDSEFQSAPDWVSIQAMINSWLADALTYELWVGTDGRSAYKIYYSDLSWPIGKVLFLKQVYSVKQRLGITKDNAEHREDEIYRRAKIAYGALSTKLGEQNFLFDDRPSSLDATFLGHVLVTLHALPDTSVLRSK+LEHDNIVRYAEKLKTELIESGSSSSGPQFRSVPSSSTPRKGPSNW Sbjct: 4 LFFNKFL--SDQIPYVESGTYVAYNNENSGVVECLKKDGIVDLDSEFQSAPDWVSIQAMINSWLADALTYELWVGTDGRSAYKIYYSDLSWPIGKVLFLKQVYSVKQRLGITKDNAEHREDEIYRRAKIAYGALSTKLGEQNFLFDDRPSSLDATFLGHVLVTLHALPDTSVLRSKLLEHDNIVRYAEKLKTELIESGSSSSGPQFRSVPSSSTPRKGPSNW 223
BLAST of g.arboreum_cottongen_reftransV1_0021584 vs. ExPASy TrEMBL
Match: A0A067LDZ2_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_04566 PE=4 SV=1) HSP 1 Score: 384.415 bits (986), Expect = 8.407e-128 Identity = 192/262 (73.28%), Postives = 222/262 (84.73%), Query Frame = 3 Query: 135 REAEEFTLVARKPYFDLPTACPICLPLFIYLKLAHFPFRLSFNSIFPDSDQIPYVESGTYVAYNNENSGVVECLKKDGIVDLDSEFQSAPDWVSIQAMINSWLADALTYELWVGTDGRSAYKIYYSDLSWPIGKVLFLKQVYSVKQRLGITKDNAEHREDEIYRRAKIAYGALSTKLGEQNFLFDDRPSSLDATFLGHVLVTLHALPDTSVLRSKVLEHDNIVRYAEKLKTELIEXXXXXXXX-XXXXXXXXXTPRKGPSNW 917 RE EE+TLVARKP F LPTACPICLP++IYLKLA FPFRL FNS +PDSDQIPYVESG YVAYNNEN GV++ LK+DGIV+LD+EF S P+W+S++AMINSWL DA+TYELW+G+ G SA+K YYSDL W IGK LF+KQ Y+VKQRLGITK+NAE RE EIY+RAKIAY ALST+LGEQ FLFDDR SSLDA FLGHVL T+ ALP+TSVLRS +LEH N+VRYAEK KT +ES SSSS +F SSSTPR+GPSN+ Sbjct: 5 REREEYTLVARKPCFGLPTACPICLPVYIYLKLARFPFRLDFNSTYPDSDQIPYVESGVYVAYNNENGGVIQRLKEDGIVNLDAEFCSIPEWISLKAMINSWLLDAITYELWLGSAGSSAFKSYYSDLPWLIGKALFVKQTYTVKQRLGITKENAERREVEIYKRAKIAYAALSTRLGEQEFLFDDRASSLDAFFLGHVLYTIQALPETSVLRSSLLEHGNLVRYAEKFKTNFLESDSSSSSIPRFHPESSSSTPRRGPSNY 266
BLAST of g.arboreum_cottongen_reftransV1_0021584 vs. ExPASy TrEMBL
Match: V4UK35_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10008916mg PE=4 SV=1) HSP 1 Score: 377.867 bits (969), Expect = 2.641e-125 Identity = 191/268 (71.27%), Postives = 232/268 (86.57%), Query Frame = 3 Query: 114 MEQVAGEREAEEFTLVARKPYFDLPTACPICLPLFIYLKLAHFPFRLSFNSIFPDSDQIPYVESGTYVAYNNENSGVVECLKKDGIVDLDSEFQSAPDWVSIQAMINSWLADALTYELWVGTDGRSAYKIYYSDLSWPIGKVLFLKQVYSVKQRLGITKDNAEHREDEIYRRAKIAYGALSTKLGEQNFLFDDRPSSLDATFLGHVLVTLHALPDTSVLRSKVLEHDNIVRYAEKLKTELIEXXXXXXXXXXXXXXXXXTPRKGPSNW 917 ME+V E E+FTLV RKPYF LPTACPICLP++IYLK A PF L+F+S +PDSD IPYVES TYVA NNEN GV+ECLKKDGIVDLD+ +QS P+W+S++A+I+SWL +AL YELWVG+DG S KIYYSDL+WPIGKVLFL+QV +VKQ+LGITK+N++ RE+EIY+RA IAY ALST+LGE++FLF++RPSS+DA L HVLVTLHALP+TS+L+SK+LEH N+VRYAEKLKTE +E+GSSSS P F S PSSSTPRKGPS+W Sbjct: 1 MERV---NEREDFTLVTRKPYFGLPTACPICLPVYIYLKFARLPFHLAFDSTYPDSDIIPYVESATYVACNNENGGVIECLKKDGIVDLDNGYQSVPEWISMKALISSWLEEALIYELWVGSDGNSVRKIYYSDLAWPIGKVLFLQQVRTVKQQLGITKENSDRREEEIYKRASIAYRALSTRLGEESFLFENRPSSVDAILLAHVLVTLHALPETSLLKSKLLEHGNLVRYAEKLKTEFVEAGSSSSIPPFPSDPSSSTPRKGPSHW 265
BLAST of g.arboreum_cottongen_reftransV1_0021584 vs. ExPASy TrEMBL
Match: W9SGI3_9ROSA (Uncharacterized protein OS=Morus notabilis GN=L484_009206 PE=4 SV=1) HSP 1 Score: 368.237 bits (944), Expect = 1.454e-121 Identity = 176/264 (66.67%), Postives = 215/264 (81.44%), Query Frame = 3 Query: 123 VAGEREAEEFTLVARKPYFDLPTACPICLPLFIYLKLAHFPFRLSFNSIFPDSDQIPYVESGTYVAYNNENSGVVECLKKDGIVDLDSEFQSAPDWVSIQAMINSWLADALTYELWVGTDGRSAYKIYYSDLSWPIGKVLFLKQVYSVKQRLGITKDNAEHREDEIYRRAKIAYGALSTKLGEQNFLFDDRPSSLDATFLGHVLVTLHALPDTSVLRSKVLEHDNIVRYAEKLKTELIEXXXXXXXXXXXXXXXXXTPRKGPSN 914 + GER E +TLV R+P + LPTACP CLPL++YL+ A+ PF L FN ++PDSDQIPY+ESG YVAYNNE GV+E +K DGI+DLD+E S PDW+S +AM+ SWLADA+ YELWV +DG SA KIY SDL WPIGKVLFLKQ Y+VKQ+LGI KDNAE +E+EIYR+A IAYGALSTKLG+QNFLF++RPSSLDA LG L+T+HALP+TSVLRSK+LEHDN+VRYAE++KTE +++G S S P + SSST RKG S Sbjct: 1 MEGERARESYTLVVRRPCYGLPTACPECLPLYLYLRFANVPFHLDFNLVYPDSDQIPYIESGDYVAYNNEKGGVIERIKNDGIIDLDNELYSVPDWISTKAMLTSWLADAIKYELWVASDGSSAQKIYCSDLPWPIGKVLFLKQAYNVKQQLGICKDNAEQKEEEIYRKASIAYGALSTKLGDQNFLFENRPSSLDAIVLGQALITIHALPETSVLRSKLLEHDNLVRYAERIKTEFVDTGPSISVPHLHAESSSSTSRKGQSQ 264
BLAST of g.arboreum_cottongen_reftransV1_0021584 vs. ExPASy TrEMBL
Match: A0A0A0LU72_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G423330 PE=4 SV=1) HSP 1 Score: 357.451 bits (916), Expect = 3.416e-117 Identity = 175/265 (66.04%), Postives = 213/265 (80.38%), Query Frame = 3 Query: 135 REAEEFTLVARKPYFDLPTACPICLPLFIYLKLAHFPFRLSFNSIFPDSDQIPYVESGTYVAYNNENSGVVECLKKDGIVDLDSEFQSAPDWVSIQAMINSWLADALTYELWVGTDGRSAYKIYYSDLSWPIGKVLFLKQVYSVKQRLGITKDNAEHREDEIYRRAKIAYGALSTKLGEQNFLFDDRPSSLDATFLGHVLVTLHALPDTSVLRSKVLEHDNIVRYAEKLKTELIEXXX----XXXXXXXXXXXXXXTPRKGPSNW 917 R E TLV RKP F+LPT CP LP++IYL+LA+ F L FN I+P+SD IPYVE+G YVAYNNE GV+ECL++DGIVDLDSEF S P+WVS ++M++SWLADA+ YELW+GTDG SA K+YYSDL WPIGKVLFLK++YSVK +LGI K+NAE RE++IYR A +AYGALST+LGEQNFLF++RPSSLDA LGH+L TL LP+TSVLRSK+LEH N+VRYAEK TEL+E G+ S + + SSSTPR+GP NW Sbjct: 4 RAEEGLTLVVRKPCFNLPTGCPDSLPVYIYLRLANLHFHLDFNLIYPESDIIPYVETGNYVAYNNEKGGVIECLRQDGIVDLDSEFLSLPEWVSAKSMVSSWLADAVMYELWLGTDGASASKVYYSDLPWPIGKVLFLKKLYSVKLQLGINKENAERREEQIYRNANLAYGALSTRLGEQNFLFENRPSSLDALVLGHLLFTLQVLPETSVLRSKLLEHSNLVRYAEKYMTELVEVGTSSSPLPSSSRSSTGASSSTPRRGPYNW 268
BLAST of g.arboreum_cottongen_reftransV1_0021584 vs. ExPASy TrEMBL
Match: A0A059CL74_EUCGR (Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_C00132 PE=4 SV=1) HSP 1 Score: 354.755 bits (909), Expect = 3.617e-116 Identity = 180/267 (67.42%), Postives = 214/267 (80.15%), Query Frame = 3 Query: 123 VAGEREAE-EFTLVARKPYFDLPTACPICLPLFIYLKLAHFPFRLSFNSIFPDSDQIPYVESGTYVAYNNENSGVVECLKKDGIVDLDSEFQSAPDWVSIQAMINSWLADALTYELWVGTDGRSAYKIYYSDLSWPIGKVLFLKQVYSVKQRLGITKDNAEHREDEIYRRAKIAYGALSTKLGEQNFLFDDRPSSLDATFLGHVLVTLHALPDTSVLRSKVLEHDNIVRYAEKLKTELIEXXXXXXXXXXXXXXXXXT-PRKGPSNW 917 + G E E EFTLVARKP F LPTACP CLP+FIYLKLA PFRL FN FPDSDQ+PYVESG YVAYNNE GV+E LK+DGIVDLD E +S P+++S +AMI+SWL +A+ YELWVG+DG SA+ IYY+DL WP+GK+L+LKQ+ SVKQ LGITKDNAE RE EIYRRAKIAY ALST LGE N+ F RPSSLDA FLGH L TL ALP+ S+LR+++LEH N+VRYAEK K+E +E+GSSSS SS++ PR+GPS+W Sbjct: 1 MEGASETEREFTLVARKPCFGLPTACPHCLPVFIYLKLAKIPFRLDFNLTFPDSDQVPYVESGAYVAYNNEKGGVIESLKEDGIVDLDLELRSVPEFISSKAMISSWLEEAIIYELWVGSDGTSAHNIYYADLPWPVGKLLYLKQIRSVKQHLGITKDNAERREAEIYRRAKIAYEALSTMLGE-NYFFFGRPSSLDAFFLGHALFTLQALPEASLLRNRLLEHGNLVRYAEKHKSECLEAGSSSSSDMHFPPSSSASAPRQGPSHW 266
BLAST of g.arboreum_cottongen_reftransV1_0021584 vs. ExPASy Swiss-Prot
Match: MTX_ARATH (Mitochondrial outer membrane import complex protein METAXIN OS=Arabidopsis thaliana GN=MTX1 PE=1 SV=1) HSP 1 Score: 340.887 bits (873), Expect = 7.141e-113 Identity = 161/237 (67.93%), Postives = 191/237 (80.59%), Query Frame = 3 Query: 129 GEREAEEFTLVARKPYFDLPTACPICLPLFIYLKLAHFPFRLSFNSIFPDSDQIPYVESGTYVAYNNENSGVVECLKKDGIVDLDSEFQSAPDWVSIQAMINSWLADALTYELWVGTDGRSAYKIYYSDLSWPIGKVLFLKQVYSVKQRLGITKDNAEHREDEIYRRAKIAYGALSTKLGEQNFLFDDRPSSLDATFLGHVLVTLHALPDTSVLRSKVLEHDNIVRYAEKLKTELIE 839 G++E +TLVARKP FDLPTACP CLP +IYLKLA PF L+FNS FPDSD++PY ES TYVAYNNE+ GV+E LKKDGIV+LDS+ QS D++S++A+I SWL +ALTYE+WVGT+G S KIYYSDL W I KVLF KQ Y K RLGITK+NAE RE +IY+RA AY ALST+LGEQ FLF+DRPSSLDA L H+L + ALP TSVLR K+LEH N+VRYAEKLK+E +E Sbjct: 3 GDQETNVYTLVARKPSFDLPTACPNCLPAYIYLKLAQLPFELAFNSTFPDSDELPYFESDTYVAYNNEDGGVIEKLKKDGIVNLDSQLQSLSDYLSLKALIVSWLEEALTYEIWVGTEGISTSKIYYSDLPWVISKVLFYKQTYLAKNRLGITKENAEQREKQIYKRASEAYEALSTRLGEQKFLFEDRPSSLDAFLLSHILFIIQALPVTSVLRCKLLEHSNLVRYAEKLKSEFLE 239
BLAST of g.arboreum_cottongen_reftransV1_0021584 vs. ExPASy Swiss-Prot
Match: MTX2_HUMAN (Metaxin-2 OS=Homo sapiens GN=MTX2 PE=1 SV=1) HSP 1 Score: 60.8474 bits (146), Expect = 3.952e-9 Identity = 51/221 (23.08%), Postives = 97/221 (43.89%), Query Frame = 3 Query: 207 LPLFIYLKLAHFPFRLSFNS---IFPDSDQIPYVESGTYVAYNNENSGVVECLKKDG--IVDLDSEFQSAPDWVSIQAMINSWLADALTYELWV--GTDGRSAYKIYYSDLSWPIGKVLFLKQVYSVKQRL---GITKDNAEHREDEIYRRAKIAYGALSTKLGEQNFLFDDRPSSLDATFLGHVLVTLHALPDTSVLRSKVLEHDNIVRYAEKLKTELIE 839 L + +L++ + P ++ + S ++P++ G V +E +V+ +K G + D E Q A + + ++N+ L A Y W T G + Y S WP+ +L ++ + VK+++ G K D++ ALS +LG Q + F+ +P+ LDA GH+ L L KV + N++ + +++ E Sbjct: 42 LAVQAFLQMCNLPIKVVCRANAEYMSPSGKVPFIHVGNQVV--SELGPIVQFVKAKGHSLSDGLEEVQKA-EMKAYMELVNNMLLTAELYLQWCDEATVGEITHARYGSPYPWPLNHILAYQKQWEVKRKMKAIGWGKKTL----DQVLEDVDQCCQALSQRLGTQPYFFNKQPTELDALVFGHLYTILTTQLTNDELSEKVKNYSNLLAFCRRIEQHYFE 255
BLAST of g.arboreum_cottongen_reftransV1_0021584 vs. ExPASy Swiss-Prot
Match: MTX2_PIG (Metaxin-2 OS=Sus scrofa GN=MTX2 PE=2 SV=1) HSP 1 Score: 60.077 bits (144), Expect = 6.538e-9 Identity = 51/219 (23.29%), Postives = 97/219 (44.29%), Query Frame = 3 Query: 207 LPLFIYLKLAHFPFRLSFNS---IFPDSDQIPYVESGTYVAYNNENSGVVECLKKDG--IVDLDSEFQSAPDWVSIQAMINSWLADALTYELWV--GTDGRSAYKIYYSDLSWPIGKVLFLKQVYSVKQRL-GITKDNAEHREDEIYRRAKIAYGALSTKLGEQNFLFDDRPSSLDATFLGHVLVTLHALPDTSVLRSKVLEHDNIVRYAEKLKTELIE 839 L + +L++ + P ++ + S ++P++ G V +E +V+ +K G + D E Q A + + ++N+ L A Y W T G + Y S WP+ +L ++ + VK+++ I N D++ ALS +LG Q + F+ +P+ LDA GH+ L L KV + N++ + +++ E Sbjct: 42 LAVQAFLQMCNLPIKVVCRANAEYMSPSGKVPFIHVGNQVV--SELGPIVQFVKAKGHSLSDGLDEVQKA-EMKAYMELVNNMLLTAELYLQWCDEATVGEITHARYGSPYPWPLNHILAYQKQWEVKRKMKAIGWGN--KTLDQVLEDVDQCCQALSQRLGTQPYFFNKQPTELDALVFGHLYTILTTQLTNDELSEKVKNYSNLLAFCRRIEQHYFE 255
BLAST of g.arboreum_cottongen_reftransV1_0021584 vs. ExPASy Swiss-Prot
Match: MTX2_MOUSE (Metaxin-2 OS=Mus musculus GN=Mtx2 PE=1 SV=1) HSP 1 Score: 59.3066 bits (142), Expect = 1.354e-8 Identity = 51/219 (23.29%), Postives = 97/219 (44.29%), Query Frame = 3 Query: 207 LPLFIYLKLAHFPFRLSFNS---IFPDSDQIPYVESGTYVAYNNENSGVVECLKKDG--IVDLDSEFQSAPDWVSIQAMINSWLADALTYELWV--GTDGRSAYKIYYSDLSWPIGKVLFLKQVYSVKQRL-GITKDNAEHREDEIYRRAKIAYGALSTKLGEQNFLFDDRPSSLDATFLGHVLVTLHALPDTSVLRSKVLEHDNIVRYAEKLKTELIE 839 L + +L++ + P ++ + S ++P++ G V +E +V+ +K G + D E Q A + + ++N+ L A Y W T G Y S WP+ +L ++ + VK+++ I N D++ ALS +LG Q + F+ +P+ LDA GH+ L + L KV + N++ + +++ E Sbjct: 42 LAVQAFLQMCNLPVKVVCRANAEYMSPSGKVPFIHVGNQVV--SELGPIVQFVKAKGHSLSDGLDEVQKA-EMKAYMELVNNMLLTAELYLQWCDEATVGEITIARYGSPYPWPLNHILAYQKQWEVKRKMKAIGWGN--KTLDQVLEDVDQCCQALSQRLGTQPYFFNKQPTELDALVFGHLYTILTTQLTSDELSEKVKNYSNLLAFCRRIEQHYFE 255
BLAST of g.arboreum_cottongen_reftransV1_0021584 vs. ExPASy Swiss-Prot
Match: FAXC_RAT (Failed axon connections homolog OS=Rattus norvegicus GN=Faxc PE=3 SV=1) HSP 1 Score: 59.3066 bits (142), Expect = 2.419e-8 Identity = 57/234 (24.36%), Postives = 99/234 (42.31%), Query Frame = 3 Query: 168 KPYFDLPTACPICLPLFIYLKLAHFPFRLSFNSIFPDSDQIPYVESGTYVAYNNEN-SG---VVECLKKDGIVDLDSEFQSAPDWVS--IQAMINSWLADALTYELWVGTDGRSAYKIYYSDLSWPIGKVLFLKQVYSVKQRLGITKDN------AEHREDEIYRRAKIAYGALSTKLGEQNFLFDDRPSSLDATFLGHVLVTLHALPDTSVLRSKVLEHDNIVRYAEKLKTEL 833 +P +P+ P CL + YL++A P++ F ++P++E YNNE SG +++ L++ V+L+ VS + M+ L Y WV + + S P +L + K GI K E+EIY + +L+ LG++ ++ + S+LDAT GH+ + LP T R E N+ Y E+++ + Sbjct: 107 RPNNGVPSLSPFCLKMETYLRMADLPYQNYFGGKLSAQGKMPWIE------YNNEKVSGTEFIIDFLEEKLGVNLNKNLGPHERAVSRAVTKMVEEHFYWTLAYCQWVDNLNETRKMLSLSGGG-PFSNLLRWVVCHITK---GIVKREMHGHGIGRFSEEEIYMLMEKDMRSLAGLLGDKKYIMGPKLSTLDATVFGHLAQAMWTLPGTRPERLIKGELINLAMYCERIRRKF 330
BLAST of g.arboreum_cottongen_reftransV1_0021584 vs. ExPASy Swiss-Prot
Match: FAXC_MOUSE (Failed axon connections homolog OS=Mus musculus GN=Faxc PE=2 SV=1) HSP 1 Score: 59.3066 bits (142), Expect = 2.620e-8 Identity = 57/234 (24.36%), Postives = 99/234 (42.31%), Query Frame = 3 Query: 168 KPYFDLPTACPICLPLFIYLKLAHFPFRLSFNSIFPDSDQIPYVESGTYVAYNNEN-SG---VVECLKKDGIVDLDSEFQSAPDWVS--IQAMINSWLADALTYELWVGTDGRSAYKIYYSDLSWPIGKVLFLKQVYSVKQRLGITKDN------AEHREDEIYRRAKIAYGALSTKLGEQNFLFDDRPSSLDATFLGHVLVTLHALPDTSVLRSKVLEHDNIVRYAEKLKTEL 833 +P +P+ P CL + YL++A P++ F ++P++E YNNE SG +++ L++ V+L+ VS + M+ L Y WV + + S P +L + K GI K E+EIY + +L+ LG++ ++ + S+LDAT GH+ + LP T R E N+ Y E+++ + Sbjct: 107 RPNNGVPSLSPFCLKMETYLRMADLPYQNYFGGKLSAQGKMPWIE------YNNEKVSGTEFIIDFLEEKLGVNLNKSLGPHERAVSRAVTKMVEEHFYWTLAYCQWVDNLNETRKMLSLSGGG-PFSNLLRWVVCHITK---GIVKREMHGHGIGRFSEEEIYMLMEKDMRSLAGLLGDKKYIMGPKLSTLDATVFGHLAQAMWTLPGTRPERLIKGELINLAMYCERIRRKF 330
BLAST of g.arboreum_cottongen_reftransV1_0021584 vs. ExPASy Swiss-Prot
Match: MTX3_DANRE (Metaxin-3 OS=Danio rerio GN=mtx3 PE=2 SV=2) HSP 1 Score: 56.6102 bits (135), Expect = 1.240e-7 Identity = 60/240 (25.00%), Postives = 99/240 (41.25%), Query Frame = 3 Query: 141 AEEFTLVARKPYFDLPTACPICLPLFIYLKLAHFPFRLSF-----NSIFPDSDQIPYVESGTYVAYNNENSGVVECLKKDGI-VDLDSEFQSAPDWVSIQAMINSWLADALTYELWVGTDGRS--AYKIYYSDLSWPIGKVLFLKQVYSVKQRLGITKD-----NAEHREDEIYRRAKIAYGALSTKLGEQNFLFDDRPSSLDATFLGHVLVTLHALPDTSVLRSKVLEHDNIVRYAEKL 821 AE L+ +DLP+ L + Y K A + F +I QI Y GT V E + ++ L+K D + + D ++ A++ L AL + WV + + + S +P+ + +Q R+ +TK N E +IY AK LS +LG NF F D P+SLDA GH+ + A + L+ + + DN+ ++ + Sbjct: 2 AEPIELLCWGGDWDLPSVQTDSLTVLAYAKFAGAELTVKFVDWTWRTITASVPQIHY--EGTTVT---EPTQILNFLRKQRFNADFELTAKQGADTMAYIALLEEKLRPALLHTFWVDAENYANLTRPWFTSHSPFPLNFFVPGRQASLALSRILLTKAESPLLNITEVEGKIYSEAKECLNLLSHRLGNFNFFFGDTPTSLDAFVFGHIAPLIKAPLPSGQLQKHLNQLDNLCQFCNTI 236
BLAST of g.arboreum_cottongen_reftransV1_0021584 vs. ExPASy Swiss-Prot
Match: FAXC_HUMAN (Failed axon connections homolog OS=Homo sapiens GN=FAXC PE=2 SV=2) HSP 1 Score: 56.6102 bits (135), Expect = 1.679e-7 Identity = 55/234 (23.50%), Postives = 99/234 (42.31%), Query Frame = 3 Query: 168 KPYFDLPTACPICLPLFIYLKLAHFPFRLSFNSIFPDSDQIPYVESGTYVAYNNEN-SG---VVECLKKDGIVDLDSEFQSAPDWVS--IQAMINSWLADALTYELWVGTDGRSAYKIYYSDLSWPIGKVLFLKQVYSVKQRLGITKDN------AEHREDEIYRRAKIAYGALSTKLGEQNFLFDDRPSSLDATFLGHVLVTLHALPDTSVLRSKVLEHDNIVRYAEKLKTEL 833 +P +P+ P CL + YL++A P++ F ++P++E YN+E SG +++ L++ V+L+ +S + M+ L Y WV + + S P +L + K GI K E+EIY + +L+ LG++ ++ + S+LDAT GH+ + LP T R E N+ Y E+++ + Sbjct: 107 RPNNGVPSLSPFCLKMETYLRMADLPYQNYFGGKLSAQGKMPWIE------YNHEKVSGTEFIIDFLEEKLGVNLNKNLGPHERAISRAVTKMVEEHFYWTLAYCQWVDNLNETRKMLSLSGGG-PFSNLLRWVVCHITK---GIVKREMHGHGIGRFSEEEIYMLMEKDMRSLAGLLGDKKYIMGPKLSTLDATVFGHLAQAMWTLPGTRPERLIKGELINLAMYCERIRRKF 330
BLAST of g.arboreum_cottongen_reftransV1_0021584 vs. ExPASy Swiss-Prot
Match: FAXC_XENTR (Failed axon connections homolog OS=Xenopus tropicalis GN=faxc PE=3 SV=1) HSP 1 Score: 55.0694 bits (131), Expect = 5.959e-7 Identity = 50/225 (22.22%), Postives = 95/225 (42.22%), Query Frame = 3 Query: 168 KPYFDLPTACPICLPLFIYLKLAHFPFRLSFNSIFPDSDQIPYVESGTYVAYNNEN-SG---VVECLKKDGIVDLDSEFQSAPDWVS--IQAMINSWLADALTYELWVGTDGRSAYKIYYSDLSWPIGKVLFLKQVYSVKQRLGITKDNAEHREDEIYRRAKIAYGALSTKLGEQNFLFDDRPSSLDATFLGHVLVTLHALPDTSVLRSKVLEHDNIVRYAEKLK 824 +P +P+ P CL + YL++A P++ F+ ++P++E YN+ SG +++ L++ V+L+ VS + M+ L Y WV + + + + K + + +R + E+EIYR + +L+ LG++ +L + S+LDAT GH+ L T E N+ Y E+++ Sbjct: 106 RPNNGVPSLSPFCLKIETYLRMADLPYQNYFDGKLSPQGKMPWIE------YNHTRVSGTEFIIDFLEEKLGVNLNKHLNPHQRAVSRAVTKMVEEHFYWTLAYCQWVENLDETQKMLNITGPLSDLLKWILCHLTKGIVKREMYGQGIGRFSEEEIYRLMEKDMRSLAGLLGDKKYLMGPKFSTLDATVFGHIANALWGTQGTYKEEGIAGELINLAMYCERIR 324 The following BLAST results are available for this feature:
BLAST of g.arboreum_cottongen_reftransV1_0021584 vs. ExPASy TrEMBL
Analysis Date: 2016-11-15 (Homology Analysis for Gossypium arboreum CottonGen RefTrans V1 vs TrEMBL) Total hits: 25
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BLAST of g.arboreum_cottongen_reftransV1_0021584 vs. ExPASy Swiss-Prot
Analysis Date: 2016-11-15 (Homology Analysis for Gossypium arboreum CottonGen RefTrans V1 vs SwissProt) Total hits: 9
InterPro
Analysis Name: InterProScan analysis for Gossypium arboreum CottonGen RefTrans V1
Date Performed: 2016-11-14
Sequences
The
following sequences are available for this feature:
contig sequence >g.arboreum_cottongen_reftransV1_0021584 ID=g.arboreum_cottongen_reftransV1_0021584; Name=g.arboreum_cottongen_reftransV1_0021584; organism=Gossypium arboreum; type=contig; length=1262bpback to top Annotated Terms
The
following terms have been associated with
this contig:
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