g.arboreum_cottongen_reftransV1_0021584, g.arboreum_cottongen_reftransV1_0021584 (contig) Gossypium arboreum

Overview
Nameg.arboreum_cottongen_reftransV1_0021584
Unique Nameg.arboreum_cottongen_reftransV1_0021584
Typecontig
OrganismGossypium arboreum (Tree cotton)
Sequence length1262
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Chr3chromosomeg.arboreum_cottongen_reftransV1_0021584:1..1262 .
Chr3:382984..390828 +
Homology
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BLAST of g.arboreum_cottongen_reftransV1_0021584 vs. ExPASy TrEMBL
Match: M5WGC9_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa008927mg PE=4 SV=1)

HSP 1 Score: 352.058 bits (902), Expect = 2.355e-115
Identity = 164/258 (63.57%), Postives = 208/258 (80.62%), Query Frame = 3 
Query:  144 EEFTLVARKPYFDLPTACPICLPLFIYLKLAHFPFRLSFNSIFPDSDQIPYVESGTYVAYNNENSGVVECLKKDGIVDLDSEFQSAPDWVSIQAMINSWLADALTYELWVGTDGRSAYKIYYSDLSWPIGKVLFLKQVYSVKQRLGITKDNAEHREDEIYRRAKIAYGALSTKLGEQNFLFDDRPSSLDATFLGHVLVTLHALPDTSVLRSKVLEHDNIVRYAEKLKTELIEXXXXXXXXXXXXXXXXXTPRKGPSNW 917
            EE+TLV RKP F LPTACP CLP+F YLK A+ PF L++N  +PDSD+IPY+ESG YV YNNE  G++E LK+D I DLD+E  S P+W+S +AMI+SWLADA+ YELW+GTDG SA  IYYSDL WPIGK+LFLKQ++ VKQ LGITKDN+E  E++ Y+RA +A+GALS++L EQNFLF++RPSSLDA FLG  L+TL ALP+TSVLRSK+LEH+N+VRY ++LKTE ++   + S     + PSS+ PR+GPSNW
Sbjct:    2 EEYTLVVRKPCFGLPTACPSCLPVFFYLKFANVPFHLAYNLTYPDSDKIPYIESGEYVTYNNEKGGIIERLKEDRIADLDTELHSVPEWISTKAMISSWLADAIKYELWLGTDGSSAETIYYSDLPWPIGKILFLKQLHKVKQELGITKDNSEKIEEQTYKRASLAFGALSSRLEEQNFLFENRPSSLDALFLGQALITLQALPETSVLRSKLLEHENLVRYVDRLKTEFVD---AGSSSSVPNYPSSAAPRRGPSNW 256
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BLAST of g.arboreum_cottongen_reftransV1_0021584 vs. ExPASy TrEMBL
Match: D7L1Y0_ARALL (Putative uncharacterized protein (Fragment) OS=Arabidopsis lyrata subsp. lyrata GN=ARALYDRAFT_480824 PE=4 SV=1)

HSP 1 Score: 347.821 bits (891), Expect = 1.140e-113
Identity = 164/239 (68.62%), Postives = 195/239 (81.59%), Query Frame = 3 
Query:  123 VAGEREAEEFTLVARKPYFDLPTACPICLPLFIYLKLAHFPFRLSFNSIFPDSDQIPYVESGTYVAYNNENSGVVECLKKDGIVDLDSEFQSAPDWVSIQAMINSWLADALTYELWVGTDGRSAYKIYYSDLSWPIGKVLFLKQVYSVKQRLGITKDNAEHREDEIYRRAKIAYGALSTKLGEQNFLFDDRPSSLDATFLGHVLVTLHALPDTSVLRSKVLEHDNIVRYAEKLKTELIE 839
            + G++E E +TLVARKP FDLPTACP CLP +IYLKLA  PF L+FNS FPDSD++PY ESGTYVAYNNE+ GV+E LKKDGIV+LDS+ QS PD++S++A+I SWL +ALTYE+WVGT+G S  KIYYSDL W I KVLF KQ Y  K RLGITK+NAE RE +IY+RA  AY ALST+LGEQ FLF+DRPSSLDA  L H+L  + ALP TSVLR K+LEH N+VRYAEKLK+E +E
Sbjct:    1 MEGDQETEVYTLVARKPSFDLPTACPNCLPAYIYLKLAQLPFELAFNSTFPDSDELPYFESGTYVAYNNEDGGVIEKLKKDGIVNLDSQLQSLPDYLSLKALIVSWLEEALTYEIWVGTEGISTTKIYYSDLPWVISKVLFYKQTYLAKNRLGITKENAEQREKQIYKRASEAYEALSTRLGEQKFLFEDRPSSLDAFLLSHMLFIIQALPVTSVLRCKLLEHSNLVRYAEKLKSEFLE 239
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BLAST of g.arboreum_cottongen_reftransV1_0021584 vs. ExPASy TrEMBL
Match: B2Y4N9_ARAHH (Putative uncharacterized protein OS=Arabidopsis halleri subsp. halleri GN=7C17.7 PE=4 SV=1)

HSP 1 Score: 347.436 bits (890), Expect = 1.613e-113
Identity = 163/237 (68.78%), Postives = 193/237 (81.43%), Query Frame = 3 
Query:  129 GEREAEEFTLVARKPYFDLPTACPICLPLFIYLKLAHFPFRLSFNSIFPDSDQIPYVESGTYVAYNNENSGVVECLKKDGIVDLDSEFQSAPDWVSIQAMINSWLADALTYELWVGTDGRSAYKIYYSDLSWPIGKVLFLKQVYSVKQRLGITKDNAEHREDEIYRRAKIAYGALSTKLGEQNFLFDDRPSSLDATFLGHVLVTLHALPDTSVLRSKVLEHDNIVRYAEKLKTELIE 839
            G++E E +TLVARKP FDLPTACP CLP +IYLKLA  PF L+FNS FPDSD++PY ESGTYVAYNNE+ GVVE LKKDGIV+LDS+ QS PD++S++A+I SWL +ALTYE+WVGT+G S  KIYYSDL W I KVLF KQ Y  K RLGITK+N E RE +IY+RA  AY ALST+LGEQ FLF+DRPSSLDA  L H+L  + ALP TS+LR K+LEH N+VRYAEKLK+E +E
Sbjct:    3 GDQETEVYTLVARKPSFDLPTACPNCLPAYIYLKLAQLPFELAFNSTFPDSDELPYFESGTYVAYNNEDGGVVEKLKKDGIVNLDSQLQSLPDYLSLKALIVSWLEEALTYEIWVGTEGISTTKIYYSDLPWVISKVLFYKQTYMAKNRLGITKENTEQREKQIYKRASEAYEALSTRLGEQKFLFEDRPSSLDAFLLSHILFIIQALPVTSMLRCKLLEHSNLVRYAEKLKSEFLE 239
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BLAST of g.arboreum_cottongen_reftransV1_0021584 vs. ExPASy TrEMBL
Match: B9HBA0_POPTR (Metaxin-related family protein OS=Populus trichocarpa GN=POPTR_0006s07670g PE=4 SV=2)

HSP 1 Score: 347.051 bits (889), Expect = 2.075e-113
Identity = 160/235 (68.09%), Postives = 196/235 (83.40%), Query Frame = 3 
Query:  135 REAEEFTLVARKPYFDLPTACPICLPLFIYLKLAHFPFRLSFNSIFPDSDQIPYVESGTYVAYNNENSGVVECLKKDGIVDLDSEFQSAPDWVSIQAMINSWLADALTYELWVGTDGRSAYKIYYSDLSWPIGKVLFLKQVYSVKQRLGITKDNAEHREDEIYRRAKIAYGALSTKLGEQNFLFDDRPSSLDATFLGHVLVTLHALPDTSVLRSKVLEHDNIVRYAEKLKTELIE 839
            +E  E+TLVARKP F LPT CPICLP++I+LK A FPFRL FN+ FPDSDQIPY+ESGTYVA+N+EN G++E L++DGIVDLD+ F S P+W+S++AM+ +WLA+A+ YELWVG+DG SA  IYYSDL W IGK LF+KQVY VKQR GITK+NAE +E EIY+RAKIAYGALST LG+Q FLF +RPSSLDA   GHVL TL ALP++SVLR  + EH N++RYAEKLK+E +E
Sbjct:    5 QERAEYTLVARKPSFGLPTGCPICLPVYIHLKFASFPFRLDFNNTFPDSDQIPYIESGTYVAFNDENGGLIERLREDGIVDLDAAFCSLPEWISMKAMVCTWLAEAVMYELWVGSDGTSARAIYYSDLPWLIGKALFMKQVYVVKQRFGITKENAERKEAEIYKRAKIAYGALSTTLGDQTFLF-ERPSSLDAYLFGHVLFTLQALPESSVLRLALSEHGNLIRYAEKLKSEYLE 238
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BLAST of g.arboreum_cottongen_reftransV1_0021584 vs. ExPASy TrEMBL
Match: A0A022REG3_ERYGU (Uncharacterized protein OS=Erythranthe guttata GN=MIMGU_mgv1a009960mg PE=4 SV=1)

HSP 1 Score: 345.51 bits (885), Expect = 1.142e-112
Identity = 173/268 (64.55%), Postives = 209/268 (77.99%), Query Frame = 3 
Query:  114 MEQVAGEREAEEFTLVARKPYFDLPTACPICLPLFIYLKLAHFPFRLSFNSIFPDSDQIPYVESGTYVAYNNENSGVVECLKKDGIVDLDSEFQSAPDWVSIQAMINSWLADALTYELWVGTDGRSAYKIYYSDLSWPIGKVLFLKQVYSVKQRLGITKDNAEHREDEIYRRAKIAYGALSTKLGEQNFLFDDRPSSLDATFLGHVLVTLHALPDTSVLRSKVLEHDNIVRYAEKLKTELIEXXXXXXXXXXXXXXXXXTPRKGPSNW 917
            ME   GERE    TLVARKP F LPTACP CLP++IYL+ +  PF L FN I PDSDQIP+VESG  VAYNNE  GV++ LK+DGIVDLDS     P+WVS +AMI SWLADA+ YELW+G+DG+SA+KIYYSDL WPIGK+L+ KQV++VKQ  GIT DNAE+RE+EIY RA +AY ALS++LGE++F F++RP+SLDA FLGHVL TLHALP+TSVLRSK+L H N+V+YAE LK E I++ SSSS        SS+  R GPS W
Sbjct:    1 MEHGTGEREG--LTLVARKPCFGLPTACPNCLPVYIYLRFSKIPFNLEFNLIHPDSDQIPFVESGDRVAYNNEKGGVIQNLKEDGIVDLDSGVSGLPEWVSTKAMIESWLADAVMYELWLGSDGKSAHKIYYSDLPWPIGKILYFKQVHAVKQLFGITSDNAENREEEIYSRASLAYDALSSRLGEESFFFENRPTSLDAVFLGHVLFTLHALPETSVLRSKLLGHANLVKYAENLKMEYIDASSSSSSAPQSDPSSSAA-RNGPSYW 265
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BLAST of g.arboreum_cottongen_reftransV1_0021584 vs. ExPASy TrEMBL
Match: D7UBK5_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_11s0103g00300 PE=4 SV=1)

HSP 1 Score: 342.428 bits (877), Expect = 1.824e-111
Identity = 178/263 (67.68%), Postives = 218/263 (82.89%), Query Frame = 3 
Query:  132 EREAEEFTLVARKPYFDLPTACPICLPLFIYLKLAHFPFRLSFNSIFPDSDQIPYVESGTYVAYNNENSGVVECLKKDGIVDLDSEFQSAPDWVSIQAMINSWLADALTYELWVGTDGRSAYKIYYSDLSWPIGKVLFLKQVYSVKQRLGITKDNAEHREDEIYRRAKIAYGALSTKLGEQNFLFDDRPSSLDATFLGHVLVTLHALPDTSVLRSKVLEHDNIVRYAEKLKTELIEXXXXXXXX-XXXXXXXXXTPRKGPSNW 917
            E + ++ TLVARKP F LPTACP CLP++IYL+ A  PF LSFN I PDSDQIPY+ESG YVAYNNE  GV+E LK+DGI+DLDS+  + P+W+S++ MI++WL +A+ YELWV +DG SA KIYYSDL WPIGK+L+ KQ+++VKQ LGITKDNAE RE+EI+RRA IAYGALST+LGEQ F F++RPS +DA FLGH L TL ALPDTSVLRSK+LEH N+V+YAEKLKTE +E+GSSSS   +F + PSSST R+GPSNW
Sbjct:    3 ELDNQKLTLVARKPCFGLPTACPSCLPVYIYLRFAQVPFDLSFNLIHPDSDQIPYIESGAYVAYNNEKGGVLESLKEDGIIDLDSQLHAIPEWLSMKVMISTWLEEAIMYELWVCSDGSSAKKIYYSDLPWPIGKILYFKQIHAVKQLLGITKDNAERREEEIHRRATIAYGALSTRLGEQTFFFENRPSGVDALFLGHALFTLQALPDTSVLRSKLLEHSNLVQYAEKLKTEFMEAGSSSSSVPRFPAEPSSSTSRRGPSNW 265
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BLAST of g.arboreum_cottongen_reftransV1_0021584 vs. ExPASy TrEMBL
Match: A5B6D4_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_004544 PE=4 SV=1)

HSP 1 Score: 342.428 bits (877), Expect = 2.241e-111
Identity = 178/263 (67.68%), Postives = 218/263 (82.89%), Query Frame = 3 
Query:  132 EREAEEFTLVARKPYFDLPTACPICLPLFIYLKLAHFPFRLSFNSIFPDSDQIPYVESGTYVAYNNENSGVVECLKKDGIVDLDSEFQSAPDWVSIQAMINSWLADALTYELWVGTDGRSAYKIYYSDLSWPIGKVLFLKQVYSVKQRLGITKDNAEHREDEIYRRAKIAYGALSTKLGEQNFLFDDRPSSLDATFLGHVLVTLHALPDTSVLRSKVLEHDNIVRYAEKLKTELIEXXXXXXXX-XXXXXXXXXTPRKGPSNW 917
            E + ++ TLVARKP F LPTACP CLP++IYL+ A  PF LSFN I PDSDQIPY+ESG YVAYNNE  GV+E LK+DGI+DLDS+  + P+W+S++ MI++WL +A+ YELWV +DG SA KIYYSDL WPIGK+L+ KQ+++VKQ LGITKDNAE RE+EI+RRA IAYGALST+LGEQ F F++RPS +DA FLGH L TL ALPDTSVLRSK+LEH N+V+YAEKLKTE +E+GSSSS   +F + PSSST R+GPSNW
Sbjct:    3 ELDNQKLTLVARKPCFGLPTACPSCLPVYIYLRFAQVPFDLSFNLIHPDSDQIPYIESGAYVAYNNEKGGVLESLKEDGIIDLDSQLHAIPEWLSMKVMISTWLEEAIMYELWVCSDGTSAKKIYYSDLPWPIGKILYFKQIHAVKQLLGITKDNAERREEEIHRRATIAYGALSTRLGEQTFFFENRPSGVDALFLGHALFTLQALPDTSVLRSKLLEHSNLVQYAEKLKTEFMEAGSSSSSVPRFPAEPSSSTSRRGPSNW 265
[Close]
BLAST of g.arboreum_cottongen_reftransV1_0021584 vs. ExPASy TrEMBL
Match: A0A078EQ64_BRANA (BnaC09g09820D protein OS=Brassica napus GN=BnaC09g09820D PE=4 SV=1)

HSP 1 Score: 340.117 bits (871), Expect = 1.231e-110
Identity = 159/234 (67.95%), Postives = 193/234 (82.48%), Query Frame = 3 
Query:  123 VAGEREAEEFTLVARKPYFDLPTACPICLPLFIYLKLAHFPFRLSFNSIFPDSDQIPYVESGTYVAYNNENSGVVECLKKDGIVDLDSEFQSAPDWVSIQAMINSWLADALTYELWVGTDGRSAYKIYYSDLSWPIGKVLFLKQVYSVKQRLGITKDNAEHREDEIYRRAKIAYGALSTKLGEQNFLFDDRPSSLDATFLGHVLVTLHALPDTSVLRSKVLEHDNIVRYAEKLK 824
            + G+++  +FTLV RKP F LPTACP CLP +IYLKLAH PF+L+FNS FPDS+++PY ESGTYVAYNNE+ GV+E LKKDGIV+LDS+ QS PD++S++A+I SWL +ALTYE+WVGT+G  A KIYYSDL W IGKVLF KQ Y  K RLG+TK+NAE RE  IY+RA  AY ALST+LGEQ FLF+DRPSSLDA FL H+L T+  LP+TSVLR K+LEH N+VRYAE+LK
Sbjct:    1 MEGDQDTSDFTLVTRKPCFGLPTACPNCLPAYIYLKLAHLPFQLAFNSTFPDSEELPYFESGTYVAYNNEDGGVIEKLKKDGIVNLDSQLQSLPDYLSLKALIVSWLDEALTYEIWVGTEGVCASKIYYSDLPWVIGKVLFYKQTYLTKNRLGLTKENAEQREKLIYKRASEAYEALSTRLGEQKFLFEDRPSSLDAFFLSHMLFTIQVLPETSVLRRKLLEHGNLVRYAERLK 234
[Close]
BLAST of g.arboreum_cottongen_reftransV1_0021584 vs. ExPASy TrEMBL
Match: V4MDI7_EUTSA (Uncharacterized protein OS=Eutrema salsugineum GN=EUTSA_v10022785mg PE=4 SV=1)

HSP 1 Score: 339.347 bits (869), Expect = 1.940e-110
Identity = 159/239 (66.53%), Postives = 193/239 (80.75%), Query Frame = 3 
Query:  123 VAGEREAEEFTLVARKPYFDLPTACPICLPLFIYLKLAHFPFRLSFNSIFPDSDQIPYVESGTYVAYNNENSGVVECLKKDGIVDLDSEFQSAPDWVSIQAMINSWLADALTYELWVGTDGRSAYKIYYSDLSWPIGKVLFLKQVYSVKQRLGITKDNAEHREDEIYRRAKIAYGALSTKLGEQNFLFDDRPSSLDATFLGHVLVTLHALPDTSVLRSKVLEHDNIVRYAEKLKTELIE 839
            + G++++ +FTLV RKP F LPTACP CLP +IYLKLA  PF L+FNS FPDSD++PY ESGTYVAYNNE+ GV+E LKKDGIV+LDS+ QS PD++S++A+I SWL +ALTYELWVGT+G S  KIYYSD+ W I KVLF KQ Y  K  LGITK+NAE +E  IY+RA  AY ALST+LGEQ FLF+DRPSSLDA FL H+L  +  LP+TSVLR K+LEH N+VRYAEKLK+E +E
Sbjct:    1 MEGDQQSADFTLVTRKPGFGLPTACPNCLPAYIYLKLAQLPFELAFNSTFPDSDELPYFESGTYVAYNNEDGGVIEKLKKDGIVNLDSQLQSLPDYLSLKALIVSWLEEALTYELWVGTEGISVSKIYYSDIPWVISKVLFYKQTYIAKNSLGITKENAEQKEKLIYKRASEAYEALSTRLGEQKFLFEDRPSSLDAFFLSHMLFIIQVLPETSVLRCKLLEHSNLVRYAEKLKSEFLE 239
[Close]
BLAST of g.arboreum_cottongen_reftransV1_0021584 vs. ExPASy TrEMBL
Match: M1AFY1_SOLTU (Uncharacterized protein OS=Solanum tuberosum GN=PGSC0003DMG400008514 PE=4 SV=1)

HSP 1 Score: 339.732 bits (870), Expect = 2.371e-110
Identity = 157/234 (67.09%), Postives = 192/234 (82.05%), Query Frame = 3 
Query:  135 REAEEFTLVARKPYFDLPTACPICLPLFIYLKLAHFPFRLSFNSIFPDSDQIPYVESGTYVAYNNENSGVVECLKKDGIVDLDSEFQSAPDWVSIQAMINSWLADALTYELWVGTDGRSAYKIYYSDLSWPIGKVLFLKQVYSVKQRLGITKDNAEHREDEIYRRAKIAYGALSTKLGEQNFLFDDRPSSLDATFLGHVLVTLHALPDTSVLRSKVLEHDNIVRYAEKLKTELI 836
            +E E+ TLV RK  F LPT+CP CLP ++YLK +  PF L FN I PDSDQIPYVESGTYVAYNNE  GV+  L +DG VDLDS+ +  P+W+S +AM++SWLADA+ YELWVG+DG SA+KIYYSDL WP+GK+L+LKQV+ VKQ LGITK+NAE RE+EIYR A  A+ ALST+LGEQ + FD+RP+SLDA FLGH L TL+ALP+TSVLRSK+LEHDN+VRY EK K+EL+
Sbjct:    5 KEREKLTLVTRKSCFGLPTSCPNCLPAYVYLKFSGTPFDLDFNLINPDSDQIPYVESGTYVAYNNEKGGVIRSLSEDGFVDLDSQVRGIPEWISAKAMVDSWLADAIIYELWVGSDGTSAHKIYYSDLPWPLGKILYLKQVHVVKQILGITKENAERREEEIYRNANDAFCALSTRLGEQAYFFDNRPTSLDAVFLGHALFTLYALPETSVLRSKLLEHDNLVRYTEKYKSELV 238
[Close]
BLAST of g.arboreum_cottongen_reftransV1_0021584 vs. ExPASy Swiss-Prot
Match: MTX_ARATH (Mitochondrial outer membrane import complex protein METAXIN OS=Arabidopsis thaliana GN=MTX1 PE=1 SV=1)

HSP 1 Score: 340.887 bits (873), Expect = 7.141e-113
Identity = 161/237 (67.93%), Postives = 191/237 (80.59%), Query Frame = 3 
Query:  129 GEREAEEFTLVARKPYFDLPTACPICLPLFIYLKLAHFPFRLSFNSIFPDSDQIPYVESGTYVAYNNENSGVVECLKKDGIVDLDSEFQSAPDWVSIQAMINSWLADALTYELWVGTDGRSAYKIYYSDLSWPIGKVLFLKQVYSVKQRLGITKDNAEHREDEIYRRAKIAYGALSTKLGEQNFLFDDRPSSLDATFLGHVLVTLHALPDTSVLRSKVLEHDNIVRYAEKLKTELIE 839
            G++E   +TLVARKP FDLPTACP CLP +IYLKLA  PF L+FNS FPDSD++PY ES TYVAYNNE+ GV+E LKKDGIV+LDS+ QS  D++S++A+I SWL +ALTYE+WVGT+G S  KIYYSDL W I KVLF KQ Y  K RLGITK+NAE RE +IY+RA  AY ALST+LGEQ FLF+DRPSSLDA  L H+L  + ALP TSVLR K+LEH N+VRYAEKLK+E +E
Sbjct:    3 GDQETNVYTLVARKPSFDLPTACPNCLPAYIYLKLAQLPFELAFNSTFPDSDELPYFESDTYVAYNNEDGGVIEKLKKDGIVNLDSQLQSLSDYLSLKALIVSWLEEALTYEIWVGTEGISTSKIYYSDLPWVISKVLFYKQTYLAKNRLGITKENAEQREKQIYKRASEAYEALSTRLGEQKFLFEDRPSSLDAFLLSHILFIIQALPVTSVLRCKLLEHSNLVRYAEKLKSEFLE 239
[Close]
BLAST of g.arboreum_cottongen_reftransV1_0021584 vs. ExPASy Swiss-Prot
Match: MTX2_HUMAN (Metaxin-2 OS=Homo sapiens GN=MTX2 PE=1 SV=1)

HSP 1 Score: 60.8474 bits (146), Expect = 3.952e-9
Identity = 51/221 (23.08%), Postives = 97/221 (43.89%), Query Frame = 3 
Query:  207 LPLFIYLKLAHFPFRLSFNS---IFPDSDQIPYVESGTYVAYNNENSGVVECLKKDG--IVDLDSEFQSAPDWVSIQAMINSWLADALTYELWV--GTDGRSAYKIYYSDLSWPIGKVLFLKQVYSVKQRL---GITKDNAEHREDEIYRRAKIAYGALSTKLGEQNFLFDDRPSSLDATFLGHVLVTLHALPDTSVLRSKVLEHDNIVRYAEKLKTELIE 839
            L +  +L++ + P ++   +       S ++P++  G  V   +E   +V+ +K  G  + D   E Q A +  +   ++N+ L  A  Y  W    T G   +  Y S   WP+  +L  ++ + VK+++   G  K       D++         ALS +LG Q + F+ +P+ LDA   GH+   L        L  KV  + N++ +  +++    E
Sbjct:   42 LAVQAFLQMCNLPIKVVCRANAEYMSPSGKVPFIHVGNQVV--SELGPIVQFVKAKGHSLSDGLEEVQKA-EMKAYMELVNNMLLTAELYLQWCDEATVGEITHARYGSPYPWPLNHILAYQKQWEVKRKMKAIGWGKKTL----DQVLEDVDQCCQALSQRLGTQPYFFNKQPTELDALVFGHLYTILTTQLTNDELSEKVKNYSNLLAFCRRIEQHYFE 255
[Close]
BLAST of g.arboreum_cottongen_reftransV1_0021584 vs. ExPASy Swiss-Prot
Match: MTX2_PIG (Metaxin-2 OS=Sus scrofa GN=MTX2 PE=2 SV=1)

HSP 1 Score: 60.077 bits (144), Expect = 6.538e-9
Identity = 51/219 (23.29%), Postives = 97/219 (44.29%), Query Frame = 3 
Query:  207 LPLFIYLKLAHFPFRLSFNS---IFPDSDQIPYVESGTYVAYNNENSGVVECLKKDG--IVDLDSEFQSAPDWVSIQAMINSWLADALTYELWV--GTDGRSAYKIYYSDLSWPIGKVLFLKQVYSVKQRL-GITKDNAEHREDEIYRRAKIAYGALSTKLGEQNFLFDDRPSSLDATFLGHVLVTLHALPDTSVLRSKVLEHDNIVRYAEKLKTELIE 839
            L +  +L++ + P ++   +       S ++P++  G  V   +E   +V+ +K  G  + D   E Q A +  +   ++N+ L  A  Y  W    T G   +  Y S   WP+  +L  ++ + VK+++  I   N     D++         ALS +LG Q + F+ +P+ LDA   GH+   L        L  KV  + N++ +  +++    E
Sbjct:   42 LAVQAFLQMCNLPIKVVCRANAEYMSPSGKVPFIHVGNQVV--SELGPIVQFVKAKGHSLSDGLDEVQKA-EMKAYMELVNNMLLTAELYLQWCDEATVGEITHARYGSPYPWPLNHILAYQKQWEVKRKMKAIGWGN--KTLDQVLEDVDQCCQALSQRLGTQPYFFNKQPTELDALVFGHLYTILTTQLTNDELSEKVKNYSNLLAFCRRIEQHYFE 255
[Close]
BLAST of g.arboreum_cottongen_reftransV1_0021584 vs. ExPASy Swiss-Prot
Match: MTX2_MOUSE (Metaxin-2 OS=Mus musculus GN=Mtx2 PE=1 SV=1)

HSP 1 Score: 59.3066 bits (142), Expect = 1.354e-8
Identity = 51/219 (23.29%), Postives = 97/219 (44.29%), Query Frame = 3 
Query:  207 LPLFIYLKLAHFPFRLSFNS---IFPDSDQIPYVESGTYVAYNNENSGVVECLKKDG--IVDLDSEFQSAPDWVSIQAMINSWLADALTYELWV--GTDGRSAYKIYYSDLSWPIGKVLFLKQVYSVKQRL-GITKDNAEHREDEIYRRAKIAYGALSTKLGEQNFLFDDRPSSLDATFLGHVLVTLHALPDTSVLRSKVLEHDNIVRYAEKLKTELIE 839
            L +  +L++ + P ++   +       S ++P++  G  V   +E   +V+ +K  G  + D   E Q A +  +   ++N+ L  A  Y  W    T G      Y S   WP+  +L  ++ + VK+++  I   N     D++         ALS +LG Q + F+ +P+ LDA   GH+   L     +  L  KV  + N++ +  +++    E
Sbjct:   42 LAVQAFLQMCNLPVKVVCRANAEYMSPSGKVPFIHVGNQVV--SELGPIVQFVKAKGHSLSDGLDEVQKA-EMKAYMELVNNMLLTAELYLQWCDEATVGEITIARYGSPYPWPLNHILAYQKQWEVKRKMKAIGWGN--KTLDQVLEDVDQCCQALSQRLGTQPYFFNKQPTELDALVFGHLYTILTTQLTSDELSEKVKNYSNLLAFCRRIEQHYFE 255
[Close]
BLAST of g.arboreum_cottongen_reftransV1_0021584 vs. ExPASy Swiss-Prot
Match: FAXC_RAT (Failed axon connections homolog OS=Rattus norvegicus GN=Faxc PE=3 SV=1)

HSP 1 Score: 59.3066 bits (142), Expect = 2.419e-8
Identity = 57/234 (24.36%), Postives = 99/234 (42.31%), Query Frame = 3 
Query:  168 KPYFDLPTACPICLPLFIYLKLAHFPFRLSFNSIFPDSDQIPYVESGTYVAYNNEN-SG---VVECLKKDGIVDLDSEFQSAPDWVS--IQAMINSWLADALTYELWVGTDGRSAYKIYYSDLSWPIGKVLFLKQVYSVKQRLGITKDN------AEHREDEIYRRAKIAYGALSTKLGEQNFLFDDRPSSLDATFLGHVLVTLHALPDTSVLRSKVLEHDNIVRYAEKLKTEL 833
            +P   +P+  P CL +  YL++A  P++  F        ++P++E      YNNE  SG   +++ L++   V+L+         VS  +  M+       L Y  WV     +   +  S    P   +L     +  K   GI K            E+EIY   +    +L+  LG++ ++   + S+LDAT  GH+   +  LP T   R    E  N+  Y E+++ + 
Sbjct:  107 RPNNGVPSLSPFCLKMETYLRMADLPYQNYFGGKLSAQGKMPWIE------YNNEKVSGTEFIIDFLEEKLGVNLNKNLGPHERAVSRAVTKMVEEHFYWTLAYCQWVDNLNETRKMLSLSGGG-PFSNLLRWVVCHITK---GIVKREMHGHGIGRFSEEEIYMLMEKDMRSLAGLLGDKKYIMGPKLSTLDATVFGHLAQAMWTLPGTRPERLIKGELINLAMYCERIRRKF 330
[Close]
BLAST of g.arboreum_cottongen_reftransV1_0021584 vs. ExPASy Swiss-Prot
Match: FAXC_MOUSE (Failed axon connections homolog OS=Mus musculus GN=Faxc PE=2 SV=1)

HSP 1 Score: 59.3066 bits (142), Expect = 2.620e-8
Identity = 57/234 (24.36%), Postives = 99/234 (42.31%), Query Frame = 3 
Query:  168 KPYFDLPTACPICLPLFIYLKLAHFPFRLSFNSIFPDSDQIPYVESGTYVAYNNEN-SG---VVECLKKDGIVDLDSEFQSAPDWVS--IQAMINSWLADALTYELWVGTDGRSAYKIYYSDLSWPIGKVLFLKQVYSVKQRLGITKDN------AEHREDEIYRRAKIAYGALSTKLGEQNFLFDDRPSSLDATFLGHVLVTLHALPDTSVLRSKVLEHDNIVRYAEKLKTEL 833
            +P   +P+  P CL +  YL++A  P++  F        ++P++E      YNNE  SG   +++ L++   V+L+         VS  +  M+       L Y  WV     +   +  S    P   +L     +  K   GI K            E+EIY   +    +L+  LG++ ++   + S+LDAT  GH+   +  LP T   R    E  N+  Y E+++ + 
Sbjct:  107 RPNNGVPSLSPFCLKMETYLRMADLPYQNYFGGKLSAQGKMPWIE------YNNEKVSGTEFIIDFLEEKLGVNLNKSLGPHERAVSRAVTKMVEEHFYWTLAYCQWVDNLNETRKMLSLSGGG-PFSNLLRWVVCHITK---GIVKREMHGHGIGRFSEEEIYMLMEKDMRSLAGLLGDKKYIMGPKLSTLDATVFGHLAQAMWTLPGTRPERLIKGELINLAMYCERIRRKF 330
[Close]
BLAST of g.arboreum_cottongen_reftransV1_0021584 vs. ExPASy Swiss-Prot
Match: MTX3_DANRE (Metaxin-3 OS=Danio rerio GN=mtx3 PE=2 SV=2)

HSP 1 Score: 56.6102 bits (135), Expect = 1.240e-7
Identity = 60/240 (25.00%), Postives = 99/240 (41.25%), Query Frame = 3 
Query:  141 AEEFTLVARKPYFDLPTACPICLPLFIYLKLAHFPFRLSF-----NSIFPDSDQIPYVESGTYVAYNNENSGVVECLKKDGI-VDLDSEFQSAPDWVSIQAMINSWLADALTYELWVGTDGRS--AYKIYYSDLSWPIGKVLFLKQVYSVKQRLGITKD-----NAEHREDEIYRRAKIAYGALSTKLGEQNFLFDDRPSSLDATFLGHVLVTLHALPDTSVLRSKVLEHDNIVRYAEKL 821
            AE   L+     +DLP+     L +  Y K A     + F      +I     QI Y   GT V    E + ++  L+K     D +   +   D ++  A++   L  AL +  WV  +  +      + S   +P+   +  +Q      R+ +TK      N    E +IY  AK     LS +LG  NF F D P+SLDA   GH+   + A   +  L+  + + DN+ ++   +
Sbjct:    2 AEPIELLCWGGDWDLPSVQTDSLTVLAYAKFAGAELTVKFVDWTWRTITASVPQIHY--EGTTVT---EPTQILNFLRKQRFNADFELTAKQGADTMAYIALLEEKLRPALLHTFWVDAENYANLTRPWFTSHSPFPLNFFVPGRQASLALSRILLTKAESPLLNITEVEGKIYSEAKECLNLLSHRLGNFNFFFGDTPTSLDAFVFGHIAPLIKAPLPSGQLQKHLNQLDNLCQFCNTI 236
[Close]
BLAST of g.arboreum_cottongen_reftransV1_0021584 vs. ExPASy Swiss-Prot
Match: FAXC_HUMAN (Failed axon connections homolog OS=Homo sapiens GN=FAXC PE=2 SV=2)

HSP 1 Score: 56.6102 bits (135), Expect = 1.679e-7
Identity = 55/234 (23.50%), Postives = 99/234 (42.31%), Query Frame = 3 
Query:  168 KPYFDLPTACPICLPLFIYLKLAHFPFRLSFNSIFPDSDQIPYVESGTYVAYNNEN-SG---VVECLKKDGIVDLDSEFQSAPDWVS--IQAMINSWLADALTYELWVGTDGRSAYKIYYSDLSWPIGKVLFLKQVYSVKQRLGITKDN------AEHREDEIYRRAKIAYGALSTKLGEQNFLFDDRPSSLDATFLGHVLVTLHALPDTSVLRSKVLEHDNIVRYAEKLKTEL 833
            +P   +P+  P CL +  YL++A  P++  F        ++P++E      YN+E  SG   +++ L++   V+L+         +S  +  M+       L Y  WV     +   +  S    P   +L     +  K   GI K            E+EIY   +    +L+  LG++ ++   + S+LDAT  GH+   +  LP T   R    E  N+  Y E+++ + 
Sbjct:  107 RPNNGVPSLSPFCLKMETYLRMADLPYQNYFGGKLSAQGKMPWIE------YNHEKVSGTEFIIDFLEEKLGVNLNKNLGPHERAISRAVTKMVEEHFYWTLAYCQWVDNLNETRKMLSLSGGG-PFSNLLRWVVCHITK---GIVKREMHGHGIGRFSEEEIYMLMEKDMRSLAGLLGDKKYIMGPKLSTLDATVFGHLAQAMWTLPGTRPERLIKGELINLAMYCERIRRKF 330
[Close]
BLAST of g.arboreum_cottongen_reftransV1_0021584 vs. ExPASy Swiss-Prot
Match: FAXC_XENTR (Failed axon connections homolog OS=Xenopus tropicalis GN=faxc PE=3 SV=1)

HSP 1 Score: 55.0694 bits (131), Expect = 5.959e-7
Identity = 50/225 (22.22%), Postives = 95/225 (42.22%), Query Frame = 3 
Query:  168 KPYFDLPTACPICLPLFIYLKLAHFPFRLSFNSIFPDSDQIPYVESGTYVAYNNEN-SG---VVECLKKDGIVDLDSEFQSAPDWVS--IQAMINSWLADALTYELWVGTDGRSAYKIYYSDLSWPIGKVLFLKQVYSVKQRLGITKDNAEHREDEIYRRAKIAYGALSTKLGEQNFLFDDRPSSLDATFLGHVLVTLHALPDTSVLRSKVLEHDNIVRYAEKLK 824
            +P   +P+  P CL +  YL++A  P++  F+       ++P++E      YN+   SG   +++ L++   V+L+         VS  +  M+       L Y  WV     +   +  +     + K +       + +R    +      E+EIYR  +    +L+  LG++ +L   + S+LDAT  GH+   L     T        E  N+  Y E+++
Sbjct:  106 RPNNGVPSLSPFCLKIETYLRMADLPYQNYFDGKLSPQGKMPWIE------YNHTRVSGTEFIIDFLEEKLGVNLNKHLNPHQRAVSRAVTKMVEEHFYWTLAYCQWVENLDETQKMLNITGPLSDLLKWILCHLTKGIVKREMYGQGIGRFSEEEIYRLMEKDMRSLAGLLGDKKYLMGPKFSTLDATVFGHIANALWGTQGTYKEEGIAGELINLAMYCERIR 324
The following BLAST results are available for this feature:
BLAST of g.arboreum_cottongen_reftransV1_0021584 vs. ExPASy TrEMBL
Analysis Date: 2016-11-15 (Homology Analysis for Gossypium arboreum CottonGen RefTrans V1 vs TrEMBL)
Total hits: 25
Match NameE-valueIdentityDescription
M5WGC9_PRUPE2.355e-11563.57Uncharacterized protein OS=Prunus persica GN=PRUPE... [more]
D7L1Y0_ARALL1.140e-11368.62Putative uncharacterized protein (Fragment) OS=Ara... [more]
B2Y4N9_ARAHH1.613e-11368.78Putative uncharacterized protein OS=Arabidopsis ha... [more]
B9HBA0_POPTR2.075e-11368.09Metaxin-related family protein OS=Populus trichoca... [more]
A0A022REG3_ERYGU1.142e-11264.55Uncharacterized protein OS=Erythranthe guttata GN=... [more]
D7UBK5_VITVI1.824e-11167.68Putative uncharacterized protein OS=Vitis vinifera... [more]
A5B6D4_VITVI2.241e-11167.68Putative uncharacterized protein OS=Vitis vinifera... [more]
A0A078EQ64_BRANA1.231e-11067.95BnaC09g09820D protein OS=Brassica napus GN=BnaC09g... [more]
V4MDI7_EUTSA1.940e-11066.53Uncharacterized protein OS=Eutrema salsugineum GN=... [more]
M1AFY1_SOLTU2.371e-11067.09Uncharacterized protein OS=Solanum tuberosum GN=PG... [more]

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BLAST of g.arboreum_cottongen_reftransV1_0021584 vs. ExPASy Swiss-Prot
Analysis Date: 2016-11-15 (Homology Analysis for Gossypium arboreum CottonGen RefTrans V1 vs SwissProt)
Total hits: 9
Match NameE-valueIdentityDescription
MTX_ARATH7.141e-11367.93Mitochondrial outer membrane import complex protei... [more]
MTX2_HUMAN3.952e-923.08Metaxin-2 OS=Homo sapiens GN=MTX2 PE=1 SV=1[more]
MTX2_PIG6.538e-923.29Metaxin-2 OS=Sus scrofa GN=MTX2 PE=2 SV=1[more]
MTX2_MOUSE1.354e-823.29Metaxin-2 OS=Mus musculus GN=Mtx2 PE=1 SV=1[more]
FAXC_RAT2.419e-824.36Failed axon connections homolog OS=Rattus norvegic... [more]
FAXC_MOUSE2.620e-824.36Failed axon connections homolog OS=Mus musculus GN... [more]
MTX3_DANRE1.240e-725.00Metaxin-3 OS=Danio rerio GN=mtx3 PE=2 SV=2[more]
FAXC_HUMAN1.679e-723.50Failed axon connections homolog OS=Homo sapiens GN... [more]
FAXC_XENTR5.959e-722.22Failed axon connections homolog OS=Xenopus tropica... [more]
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InterPro
Analysis Name: InterProScan analysis for Gossypium arboreum CottonGen RefTrans V1
Date Performed: 2016-11-14
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR033468Metaxin, glutathione S-transferase domainPFAMPF17171GST_C_6coord: 197..259
e-value: 3.7E-16
score: 58.5
IPR017410Mitochondrial outer membrane transport complex protein, metaxinPIRSFPIRSF038150Metaxincoord: 33..349
e-value: 4.0E-100
score: 332.5
IPR012336Thioredoxin-like foldPFAMPF17172GST_N_4coord: 53..145
e-value: 1.6E-16
score: 60.7
NoneNo IPR availablePANTHERPTHR12289:SF38METAXIN-2coord: 18..348
NoneNo IPR availablePANTHERPTHR12289METAXIN RELATEDcoord: 18..348
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 317..336
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 337..353
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..316
NoneNo IPR availableTMHMMTMhelixcoord: 317..336

Sequences
The following sequences are available for this feature:

contig sequence

>g.arboreum_cottongen_reftransV1_0021584 ID=g.arboreum_cottongen_reftransV1_0021584; Name=g.arboreum_cottongen_reftransV1_0021584; organism=Gossypium arboreum; type=contig; length=1262bp
AAACGCTTTGTTAAACCCCTACTCTCAAAACTCTTTTCAGCTTGCTCTGG
TATTTTTACCCATCGGAGCAAATTACAAACAGCCATAGCTGCTTAGTGAA
AAAGAAAAAGAAAATGGAGCAAGTGGCGGGTGAAAGGGAAGCCGAAGAGT
TCACACTGGTCGCAAGGAAGCCTTACTTCGATCTCCCAACTGCGTGCCCT
ATTTGTTTGCCGCTTTTCATTTATCTCAAGCTTGCCCACTTTCCCTTTCG
TTTATCTTTCAATTCAATCTTCCCTGATTCAGATCAAATTCCTTATGTTG
AATCTGGTACTTACGTTGCCTACAACAACGAGAATAGTGGGGTTGTTGAG
TGTTTAAAGAAAGATGGTATCGTTGATCTGGACTCTGAATTCCAATCTGC
CCCAGATTGGGTATCGATACAAGCTATGATTAACTCTTGGTTAGCTGATG
CATTGACGTACGAACTATGGGTGGGTACCGATGGAAGATCAGCCTACAAG
ATTTATTATTCTGATCTTTCATGGCCAATAGGAAAAGTTCTTTTCCTAAA
GCAAGTGTATAGTGTTAAACAACGTCTTGGAATTACTAAAGACAATGCCG
AACACAGAGAAGATGAGATTTACAGGAGAGCAAAAATTGCTTATGGTGCT
CTATCTACTAAGTTAGGAGAACAGAACTTCCTCTTTGATGATAGGCCATC
AAGCTTGGATGCAACTTTTCTCGGACATGTTCTTGTCACCCTTCATGCAC
TACCTGACACGTCAGTGCTCCGAAGCAAAGTCTTGGAGCATGACAATATT
GTCAGATATGCCGAAAAACTTAAAACGGAGTTGATAGAGTCTGGTTCATC
ATCTTCTGGTCCACAATTTCGCTCAGTCCCTTCATCGTCAACTCCGAGAA
AAGGTCCCTCAAATTGGAGTTCAAAGCCGAAGAGCAAGCCAAAAAGGGAG
AAAACAGAGGAGGAGAAAACTTTTAAGAGGAGGGCAAAATATTTTCTAGC
TGCACAGCTACTTGCGGTTCTGCTTTTCCTCTCCATGATGGGCGGTTATG
ATTCTGGTGACCTGGAGCTCGACGACGAAGATGAAGGCATCTCTTTCAAT
TGAAACAAATCTCTCAGTTACCGGGTACTCATTACTGACATTTTTCCCAT
TATTAGTGACAATGTTAGTGATCTGTTGAGGTTGAGCTATTAGTATTTGC
ATTAACATTGTGGTAAAAAATAAGAACATACATTTAAAGATTTGATTTAT
ACAATATTTACG
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Annotated Terms
The following terms have been associated with this contig:
Vocabulary: INTERPRO
TermDefinition
IPR033468Metaxin_GST
IPR017410Metaxin1/3
IPR012336Thioredoxin-like_fold
Vocabulary: Biological Process
TermDefinition
GO:0006626protein targeting to mitochondrion
Vocabulary: Cellular Component
TermDefinition
GO:0005741mitochondrial outer membrane