g.arboreum_cottongen_reftransV1_0019423, g.arboreum_cottongen_reftransV1_0019423 (contig) Gossypium arboreum

Overview
Nameg.arboreum_cottongen_reftransV1_0019423
Unique Nameg.arboreum_cottongen_reftransV1_0019423
Typecontig
OrganismGossypium arboreum (Tree cotton)
Sequence length1396
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Chr6chromosomeg.arboreum_cottongen_reftransV1_0019423:1..1396 .
Chr6:50212770..50215307 -
Homology
BLAST of g.arboreum_cottongen_reftransV1_0019423 vs. ExPASy TrEMBL
Match: A0A0B0NST2_GOSAR (Survival motor neuron OS=Gossypium arboreum GN=F383_18755 PE=4 SV=1)

HSP 1 Score: 604.749 bits (1558), Expect = 0.000e+0
Identity = 312/312 (100.00%), Postives = 312/312 (100.00%), Query Frame = 3
Query:   21 MGKESELWDDSALIDAFDNAMSKYKKMHGKKNSEANVSVSVHQTGDEAIKPRDAGENSSSRANTGMEMEAAKDVEPVKENHTVKLQTPETYIDSSTSLPMQDKQDGNMAYSDSQAAQDYNQLLNQYYEVEDKRQMILQQLQQFGSWNYQYSGEGSSTAAQWGTSCASQEYPIPTSQAAHSTVICSCCPYACQSLATTCTSYPCCSLAGTSVGKISTEPNGAMAYGNLPPFIDSDIVKTAMGAAEKAISSMTTKASIXXXXXXXXXXXXXXXXXXXQSTSCETDLTVLLNAWYSAGFYTGKYLVEQSIAKRRQ 956
            MGKESELWDDSALIDAFDNAMSKYKKMHGKKNSEANVSVSVHQTGDEAIKPRDAGENSSSRANTGMEMEAAKDVEPVKENHTVKLQTPETYIDSSTSLPMQDKQDGNMAYSDSQAAQDYNQLLNQYYEVEDKRQMILQQLQQFGSWNYQYSGEGSSTAAQWGTSCASQEYPIPTSQAAHSTVICSCCPYACQSLATTCTSYPCCSLAGTSVGKISTEPNGAMAYGNLPPFIDSDIVKTAMGAAEKAISSMTTKASINPNVNEENKEKKDGEEEMNQSTSCETDLTVLLNAWYSAGFYTGKYLVEQSIAKRRQ
Sbjct:    1 MGKESELWDDSALIDAFDNAMSKYKKMHGKKNSEANVSVSVHQTGDEAIKPRDAGENSSSRANTGMEMEAAKDVEPVKENHTVKLQTPETYIDSSTSLPMQDKQDGNMAYSDSQAAQDYNQLLNQYYEVEDKRQMILQQLQQFGSWNYQYSGEGSSTAAQWGTSCASQEYPIPTSQAAHSTVICSCCPYACQSLATTCTSYPCCSLAGTSVGKISTEPNGAMAYGNLPPFIDSDIVKTAMGAAEKAISSMTTKASINPNVNEENKEKKDGEEEMNQSTSCETDLTVLLNAWYSAGFYTGKYLVEQSIAKRRQ 312          
BLAST of g.arboreum_cottongen_reftransV1_0019423 vs. ExPASy TrEMBL
Match: A0A0D2TAT5_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_008G224100 PE=4 SV=1)

HSP 1 Score: 583.178 bits (1502), Expect = 0.000e+0
Identity = 304/312 (97.44%), Postives = 307/312 (98.40%), Query Frame = 3
Query:   21 MGKESELWDDSALIDAFDNAMSKYKKMHGKKNSEANVSVSVHQTGDEAIKPRDAGENSSSRANTGMEMEAAKDVEPVKENHTVKLQTPETYIDSSTSLPMQDKQDGNMAYSDSQAAQDYNQLLNQYYEVEDKRQMILQQLQQFGSWNYQYSGEGSSTAAQWGTSCASQEYPIPTSQAAHSTVICSCCPYACQSLATTCTSYPCCSLAGTSVGKISTEPNGAMAYGNLPPFIDSDIVKTAMGAAEKAISSMTTKASIXXXXXXXXXXXXXXXXXXXQSTSCETDLTVLLNAWYSAGFYTGKYLVEQSIAKRRQ 956
            MGKESELWDDSALIDAFDNAMSKYKKMHGKKNSEANVSVSVHQTGDEAIKPRDAGENSSSRANTGMEMEAAKDVEPVKENHTVKLQTPET IDSS SLPMQDKQDGN AYSDSQAAQDYNQLL QYYEVEDKRQMILQQLQQFGSWNYQYSGEGSSTAAQW TSCASQEYPIPTSQA+HSTVICSCCPYACQSLATTCTSYPCCSLAGTSVGKISTEPNGA+AYGNLPPFIDSDIVKTAMGAAE+AISSMTTKASINPNVNEENKEKKDGEEEMNQSTSCETDLTVLLNAWYSAGFYTGKYLVEQSIAKRRQ
Sbjct:    1 MGKESELWDDSALIDAFDNAMSKYKKMHGKKNSEANVSVSVHQTGDEAIKPRDAGENSSSRANTGMEMEAAKDVEPVKENHTVKLQTPETCIDSS-SLPMQDKQDGNKAYSDSQAAQDYNQLLTQYYEVEDKRQMILQQLQQFGSWNYQYSGEGSSTAAQWSTSCASQEYPIPTSQASHSTVICSCCPYACQSLATTCTSYPCCSLAGTSVGKISTEPNGAVAYGNLPPFIDSDIVKTAMGAAERAISSMTTKASINPNVNEENKEKKDGEEEMNQSTSCETDLTVLLNAWYSAGFYTGKYLVEQSIAKRRQ 311          
BLAST of g.arboreum_cottongen_reftransV1_0019423 vs. ExPASy TrEMBL
Match: A0A0D2PZS1_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_008G224100 PE=4 SV=1)

HSP 1 Score: 557.37 bits (1435), Expect = 0.000e+0
Identity = 292/300 (97.33%), Postives = 295/300 (98.33%), Query Frame = 3
Query:   21 MGKESELWDDSALIDAFDNAMSKYKKMHGKKNSEANVSVSVHQTGDEAIKPRDAGENSSSRANTGMEMEAAKDVEPVKENHTVKLQTPETYIDSSTSLPMQDKQDGNMAYSDSQAAQDYNQLLNQYYEVEDKRQMILQQLQQFGSWNYQYSGEGSSTAAQWGTSCASQEYPIPTSQAAHSTVICSCCPYACQSLATTCTSYPCCSLAGTSVGKISTEPNGAMAYGNLPPFIDSDIVKTAMGAAEKAISSMTTKASIXXXXXXXXXXXXXXXXXXXQSTSCETDLTVLLNAWYSAGFYTGK 920
            MGKESELWDDSALIDAFDNAMSKYKKMHGKKNSEANVSVSVHQTGDEAIKPRDAGENSSSRANTGMEMEAAKDVEPVKENHTVKLQTPET IDSS SLPMQDKQDGN AYSDSQAAQDYNQLL QYYEVEDKRQMILQQLQQFGSWNYQYSGEGSSTAAQW TSCASQEYPIPTSQA+HSTVICSCCPYACQSLATTCTSYPCCSLAGTSVGKISTEPNGA+AYGNLPPFIDSDIVKTAMGAAE+AISSMTTKASINPNVNEENKEKKDGEEEMNQSTSCETDLTVLLNAWYSAGFYTGK
Sbjct:    1 MGKESELWDDSALIDAFDNAMSKYKKMHGKKNSEANVSVSVHQTGDEAIKPRDAGENSSSRANTGMEMEAAKDVEPVKENHTVKLQTPETCIDSS-SLPMQDKQDGNKAYSDSQAAQDYNQLLTQYYEVEDKRQMILQQLQQFGSWNYQYSGEGSSTAAQWSTSCASQEYPIPTSQASHSTVICSCCPYACQSLATTCTSYPCCSLAGTSVGKISTEPNGAVAYGNLPPFIDSDIVKTAMGAAERAISSMTTKASINPNVNEENKEKKDGEEEMNQSTSCETDLTVLLNAWYSAGFYTGK 299          
BLAST of g.arboreum_cottongen_reftransV1_0019423 vs. ExPASy TrEMBL
Match: A0A061G7V9_THECC (Uncharacterized protein OS=Theobroma cacao GN=TCM_016596 PE=4 SV=1)

HSP 1 Score: 441.81 bits (1135), Expect = 7.372e-150
Identity = 229/312 (73.40%), Postives = 262/312 (83.97%), Query Frame = 3
Query:   21 MGKESELWDDSALIDAFDNAMSKYKKMHGKKNSEANVSVSVHQTGDEAIKPRDAGENSSSRANTGMEMEAAKDVEPVKENHTVKLQTPETYIDSSTSLPMQDKQDGNMAYSDSQAAQDYNQLLNQYYEVEDKRQMILQQLQQFGSWNYQYSGEGSSTAAQWGTSCASQEYPIPTSQAAHSTVICSCCPYACQSLATTCTSYPCCSLAGTSVGKISTEPNGAMAYGNLPPFIDSDIVKTAMGAAEKAISSMTTKASIXXXXXXXXXXXXXXXXXXXQSTSCETDLTVLLNAWYSAGFYTGKYLVEQSIAKRRQ 956
            MGKE +LWDDSAL+DAFD+AMSKYK+MHGKK SE NVSV V Q GDEA+K RDAGENS++ ++TG E   AKD++P +EN  +  QTPE YIDSS +LPMQDKQDG+  YSD Q  +DYNQLL+QYYEVE+KRQ +LQQ+QQFGSWNYQY  EGSS AAQWGTSC SQEYPI TSQA+HSTV+CSCCPY  QSL T CTSYPCCSL GT VGK ST  N A+A+G L   ID DIVKTAMGAAE+AISSMT KAS+NPN+NE+NKEKKDGE E NQST+ ETDL VLLNAWYSAGFYTGKYL+EQ+IA++RQ
Sbjct:    1 MGKEGDLWDDSALVDAFDSAMSKYKRMHGKKTSEENVSV-VDQCGDEAMKHRDAGENSNATSDTGTESAEAKDLQPDEENDNINSQTPERYIDSSNNLPMQDKQDGHKGYSDVQGTEDYNQLLSQYYEVEEKRQKLLQQMQQFGSWNYQYPAEGSSAAAQWGTSCTSQEYPIHTSQASHSTVVCSCCPYVSQSLVTPCTSYPCCSLGGTCVGKTSTNTNNAVAHGTLSTAIDCDIVKTAMGAAERAISSMTNKASVNPNINEDNKEKKDGEGETNQSTTFETDLAVLLNAWYSAGFYTGKYLMEQNIARKRQ 311          
BLAST of g.arboreum_cottongen_reftransV1_0019423 vs. ExPASy TrEMBL
Match: A0A067E8X5_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g019321mg PE=4 SV=1)

HSP 1 Score: 291.582 bits (745), Expect = 3.507e-91
Identity = 167/332 (50.30%), Postives = 214/332 (64.46%), Query Frame = 3
Query:   21 MGKESELWDDSALIDAFDNAMSKYKKMHGKKNSEANVSVSVHQTGDEAI---------KPRDAGENSSSRA-NTGMEMEAAKDVEPVKENHTVKLQTPETYIDSSTSLPMQDKQDGNMAYSDSQAAQDYNQLLNQYYEVEDKRQMILQQLQQFGSWNYQYSGEGSSTAAQWGTSCASQEYPIPTSQAAHSTVICSCCPYACQSLATTCTSYPCCSLAGTSVGKISTEPNGAMAYGNLPPFIDSDIVKTAMGAAEKAISSMTTKASIXXXXXXXXXXXXXXXXXXXQSTSCETDLTVLLNAWYSAGFYTGKYLVEQSIAKRRQ**AILIMQCG 986
            MGKE ELWDDSAL+ AFD+AMSKYKKMHGK  ++ NV   V  +G EAI         +PR   E++++    T  EM   +++  VKE+  V+   PE +++SS  L   D   G   +S SQ + DYNQLL+QYYE+E+K+Q ILQQL QF +WNYQ+SGEG    AQWGT   SQE+P+P SQ +  TV+CSCCPY CQ L   CT+YP CSL G    K  T+ N A A       ++ DIV TAMGAA KAISSM +K+ +       +  ++  E++ N+S S ETDLTV+LNAWYSAGFYTGKYL EQS+AK R+  A+    CG
Sbjct:    1 MGKEGELWDDSALVKAFDDAMSKYKKMHGK--NKTNVEEKVTSSG-EAIGSAHENQNHEPRREAEDANALVLETKTEMGETENIMSVKEDPCVESYAPELHVESSNGLATNDAVKG---HSHSQGSDDYNQLLSQYYELEEKKQQILQQLHQFSAWNYQFSGEG----AQWGTYTTSQEHPVPASQESQ-TVVCSCCPYGCQFLVAPCTAYPSCSLGGACTSKTCTDKNAAAASRKSTSLVNDDIVNTAMGAAGKAISSMKSKSFV-----YPDINEEIEEKKENESISSETDLTVVLNAWYSAGFYTGKYLTEQSMAKNRRSKALQHDACG 316          
BLAST of g.arboreum_cottongen_reftransV1_0019423 vs. ExPASy TrEMBL
Match: V4V2B3_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10001787mg PE=4 SV=1)

HSP 1 Score: 291.197 bits (744), Expect = 4.514e-91
Identity = 164/322 (50.93%), Postives = 210/322 (65.22%), Query Frame = 3
Query:   21 MGKESELWDDSALIDAFDNAMSKYKKMHGKKNSEANVSVSVHQTGDEAI---------KPRDAGENSSSRA-NTGMEMEAAKDVEPVKENHTVKLQTPETYIDSSTSLPMQDKQDGNMAYSDSQAAQDYNQLLNQYYEVEDKRQMILQQLQQFGSWNYQYSGEGSSTAAQWGTSCASQEYPIPTSQAAHSTVICSCCPYACQSLATTCTSYPCCSLAGTSVGKISTEPNGAMAYGNLPPFIDSDIVKTAMGAAEKAISSMTTKASIXXXXXXXXXXXXXXXXXXXQSTSCETDLTVLLNAWYSAGFYTGKYLVEQSIAKRRQ 956
            MGKE ELWDDSAL+ AFD+AMSKYKKMHGK  ++ NV   V  +G EAI         +PR   E++++    T  EM   +++  VKE+  V+   PE +++SS  L   D   G   +S SQ + DYNQLL+QYYE+E+K+Q ILQQL QF +WNYQ+SGEG    AQWGT   SQE+P+P SQ +  TV+CSCCPY CQ L   CT+YP CSL G    K  T+ N A A       ++ DIV TAMGAA KAISSM +K+ +       +  ++  E++ N+S S ETDLTV+LNAWYSAGFYTGKYL EQS+AK R+
Sbjct:    1 MGKEGELWDDSALVKAFDDAMSKYKKMHGK--NKTNVEEKVTSSG-EAIGSAHENQNHEPRREAEDANALVLETKTEMGETENIMSVKEDPCVESYAPELHVESSNGLATNDAVKG---HSHSQGSDDYNQLLSQYYELEEKKQQILQQLHQFSAWNYQFSGEG----AQWGTYTTSQEHPVPASQESQ-TVVCSCCPYGCQFLVAPCTAYPSCSLGGACTSKTCTDKNAAAASRKSTSLVNDDIVNTAMGAAGKAISSMKSKSFV-----YPDINEEIEEKKENESISSETDLTVVLNAWYSAGFYTGKYLTEQSMAKNRR 306          
BLAST of g.arboreum_cottongen_reftransV1_0019423 vs. ExPASy TrEMBL
Match: A0A067EHD4_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g019321mg PE=4 SV=1)

HSP 1 Score: 288.5 bits (737), Expect = 1.434e-89
Identity = 168/353 (47.59%), Postives = 216/353 (61.19%), Query Frame = 3
Query:   21 MGKESELWDDSALIDAFDNAMSKYKKMHGKKNSEANVSVSVHQTGDEAI---------KPRDAGENSSSRA-NTGMEMEAAKDVEPVKENHTVKLQTPETYIDSSTSLPMQDKQDGNMAYSDSQAAQDYNQLLNQYYEVEDKRQMILQQLQQFGSWNYQYSGEGSSTAAQWGTSCASQEYPIPTSQAAHSTVICSCCPYACQSLATTCTSYPCCSLAGTSVGKISTEPNGAMAYGNLPPFIDSDIVKTAMGAAEKAISSMTTKA---------------------SIXXXXXXXXXXXXXXXXXXXQSTSCETDLTVLLNAWYSAGFYTGKYLVEQSIAKRRQ**AILIMQCG 986
            MGKE ELWDDSAL+ AFD+AMSKYKKMHGK  ++ NV   V  +G EAI         +PR   E++++    T  EM   +++  VKE+  V+   PE +++SS  L   D   G   +S SQ + DYNQLL+QYYE+E+K+Q ILQQL QF +WNYQ+SGEG    AQWGT   SQE+P+P SQ +  TV+CSCCPY CQ L   CT+YP CSL G    K  T+ N A A       ++ DIV TAMGAA KAISSM +K+                     ++  +   +  E +  E++ N+S S ETDLTV+LNAWYSAGFYTGKYL EQS+AK R+  A+    CG
Sbjct:    1 MGKEGELWDDSALVKAFDDAMSKYKKMHGK--NKTNVEEKVTSSG-EAIGSAHENQNHEPRREAEDANALVLETKTEMGETENIMSVKEDPCVESYAPELHVESSNGLATNDAVKG---HSHSQGSDDYNQLLSQYYELEEKKQQILQQLHQFSAWNYQFSGEG----AQWGTYTTSQEHPVPASQESQ-TVVCSCCPYGCQFLVAPCTAYPSCSLGGACTSKTCTDKNAAAASRKSTSLVNDDIVNTAMGAAGKAISSMKSKSFVYPDINEGVVWGQRSYSTPFTLRESSENKEGEAEIEEKKENESISSETDLTVVLNAWYSAGFYTGKYLTEQSMAKNRRSKALQHDACG 342          
BLAST of g.arboreum_cottongen_reftransV1_0019423 vs. ExPASy TrEMBL
Match: V4T3J3_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10001787mg PE=4 SV=1)

HSP 1 Score: 287.345 bits (734), Expect = 3.209e-89
Identity = 165/343 (48.10%), Postives = 212/343 (61.81%), Query Frame = 3
Query:   21 MGKESELWDDSALIDAFDNAMSKYKKMHGKKNSEANVSVSVHQTGDEAI---------KPRDAGENSSSRA-NTGMEMEAAKDVEPVKENHTVKLQTPETYIDSSTSLPMQDKQDGNMAYSDSQAAQDYNQLLNQYYEVEDKRQMILQQLQQFGSWNYQYSGEGSSTAAQWGTSCASQEYPIPTSQAAHSTVICSCCPYACQSLATTCTSYPCCSLAGTSVGKISTEPNGAMAYGNLPPFIDSDIVKTAMGAAEKAISSMTTKA---------------------SIXXXXXXXXXXXXXXXXXXXQSTSCETDLTVLLNAWYSAGFYTGKYLVEQSIAKRRQ 956
            MGKE ELWDDSAL+ AFD+AMSKYKKMHGK  ++ NV   V  +G EAI         +PR   E++++    T  EM   +++  VKE+  V+   PE +++SS  L   D   G   +S SQ + DYNQLL+QYYE+E+K+Q ILQQL QF +WNYQ+SGEG    AQWGT   SQE+P+P SQ +  TV+CSCCPY CQ L   CT+YP CSL G    K  T+ N A A       ++ DIV TAMGAA KAISSM +K+                     ++  +   +  E +  E++ N+S S ETDLTV+LNAWYSAGFYTGKYL EQS+AK R+
Sbjct:    1 MGKEGELWDDSALVKAFDDAMSKYKKMHGK--NKTNVEEKVTSSG-EAIGSAHENQNHEPRREAEDANALVLETKTEMGETENIMSVKEDPCVESYAPELHVESSNGLATNDAVKG---HSHSQGSDDYNQLLSQYYELEEKKQQILQQLHQFSAWNYQFSGEG----AQWGTYTTSQEHPVPASQESQ-TVVCSCCPYGCQFLVAPCTAYPSCSLGGACTSKTCTDKNAAAASRKSTSLVNDDIVNTAMGAAGKAISSMKSKSFVYPDINEGVVWGQRSCSTPFTLRESSENKEGEAEIEEKKENESISSETDLTVVLNAWYSAGFYTGKYLTEQSMAKNRR 332          
BLAST of g.arboreum_cottongen_reftransV1_0019423 vs. ExPASy TrEMBL
Match: U5GS09_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0001s01970g PE=4 SV=1)

HSP 1 Score: 274.633 bits (701), Expect = 1.973e-84
Identity = 158/329 (48.02%), Postives = 201/329 (61.09%), Query Frame = 3
Query:   21 MGKESELWDDSALIDAFDNAMSKYKKMHGKK-----------------NSEANVSVSVHQTGDEAIKPRDAGENSSSRANTGMEMEAAKDVEPVKENHTVKLQTPETYIDSSTSLPMQDKQDGNMAYSDSQAAQDYNQLLNQYYEVEDKRQMILQQLQQFGSWNYQYSGEGSSTAAQWGTSCASQEYPIPTSQAAHSTVICSCCPYACQSLATTCTSYPCCSLAGTSVGKISTEPNGAMAYGNLPPFIDSDIVKTAMGAAEKAISSMTTKASIXXX--XXXXXXXXXXXXXXXXQSTSCETDLTVLLNAWYSAGFYTGKYLVEQSIAKR 950
            MGKE ELWDDSALI+AFD+AMSKYKKMHGKK                 +  A+    V ++ D  +K  D  ENS+  +NT  E+E  +++ P K N+ V    PE Y+D S          G      S  A+DYNQLL QYYE+E+KRQ ILQQL   G +NYQY  EGS +   WGT  ASQ+  +  +QA+ S +ICSCCPYAC      C+S+  C+  GTS+GK  T+ +  M  G   P ID DIVKTAM AAE+A+SSMT    +  +     +   +KD E E+ ++TS ETDLTV+LNAWYSAGFYTGKYL E+SIAK+
Sbjct:    1 MGKEGELWDDSALINAFDDAMSKYKKMHGKKRIQDKSTDGGKFGGGTEDENASAITRVDESLDGTVKEAD--ENSNVTSNTVTELEETENLAPAKLNNCVDSLGPEPYVDPSNGGVHAQTLSGLY----SHGAEDYNQLLGQYYELEEKRQRILQQLNLHGGYNYQYPAEGSGSGGYWGTCSASQDQSVAATQASLSPLICSCCPYACHCSVAPCSSFSSCTFGGTSLGKACTDSSAMMNPGKSFPPIDDDIVKTAMDAAERAMSSMTMNTPVVNSDIEGNKAGNRKDNEGEITENTSSETDLTVVLNAWYSAGFYTGKYLTERSIAKK 323          
BLAST of g.arboreum_cottongen_reftransV1_0019423 vs. ExPASy TrEMBL
Match: W9S513_9ROSA (Uncharacterized protein OS=Morus notabilis GN=L484_003623 PE=4 SV=1)

HSP 1 Score: 259.225 bits (661), Expect = 1.066e-78
Identity = 154/325 (47.38%), Postives = 194/325 (59.69%), Query Frame = 3
Query:   21 MGKESELWDDSALIDAFDNAMSKYKKMHGKK------NSEANVSVSVHQTGD-----EAIKPRDAGENSSSRANTGMEMEAAKDVEPVKENHTVKLQTPETYIDSSTSLPMQDKQDGNMAYSDSQAAQDYNQLLNQYYEVEDKRQMILQQLQQFGSWNYQYSGEGSSTAAQWGTSCASQEYPIPTSQAAHSTVICSCCPYACQSLATTCTSYPCCSLAGTSVGKISTEPNGAMAYGNLPPFIDSDIVKTAMGAAEKAISSMTTKAS--IXXXXXXXXXXXXXXXXXXXQSTSCETDLTVLLNAWYSAGFYTGKYLVEQSIAKRRQ 956
            MG++ +LWDDSAL++AFD+A+SKYK MHGKK      + E   S   H   D     EA +   A + S+  ++T  EM  + +   VKE  +V    PE Y + +        QD   +YS  Q A DYNQLLNQYYE+E KRQ I+ QL Q+GSWNYQ  G+GS +  Q        E+P+P  QA++ T  C+CCPYA Q  A  CTS P C L G+ VGK   +      +    P +DS+IV+TAMGAAE+AI+SM  K S   N       KEK   E  +   TS ETDLTV+LNAWYSAGFYTGKYLVEQSIAK+RQ
Sbjct:    1 MGRQGDLWDDSALLNAFDDAISKYKIMHGKKSGDVSNDGELISSCGDHLVADVDDHQEATRQEGADDKSNLPSSTVTEMGESSNPSLVKEKQSVDPHVPEPYAEVA--------QDVQKSYSYLQDAHDYNQLLNQYYELEQKRQQIIGQLHQYGSWNYQSYGDGSGSTFQ--------EHPLPVCQASNPTTFCTCCPYASQCFAAPCTSLPSCFLGGSCVGKSCADACEVTNFRKSSPQVDSNIVETAMGAAERAIASMREKVSGDSNSTEGNIEKEKHSTERAVVSPTSSETDLTVVLNAWYSAGFYTGKYLVEQSIAKKRQ 309          
The following BLAST results are available for this feature:
BLAST of g.arboreum_cottongen_reftransV1_0019423 vs. ExPASy TrEMBL
Analysis Date: 2016-11-15 (Homology Analysis for Gossypium arboreum CottonGen RefTrans V1 vs TrEMBL)
Total hits: 25
Match NameE-valueIdentityDescription
A0A0B0NST2_GOSAR0.000e+0100.00Survival motor neuron OS=Gossypium arboreum GN=F38... [more]
A0A0D2TAT5_GOSRA0.000e+097.44Uncharacterized protein OS=Gossypium raimondii GN=... [more]
A0A0D2PZS1_GOSRA0.000e+097.33Uncharacterized protein OS=Gossypium raimondii GN=... [more]
A0A061G7V9_THECC7.372e-15073.40Uncharacterized protein OS=Theobroma cacao GN=TCM_... [more]
A0A067E8X5_CITSI3.507e-9150.30Uncharacterized protein OS=Citrus sinensis GN=CISI... [more]
V4V2B3_9ROSI4.514e-9150.93Uncharacterized protein OS=Citrus clementina GN=CI... [more]
A0A067EHD4_CITSI1.434e-8947.59Uncharacterized protein OS=Citrus sinensis GN=CISI... [more]
V4T3J3_9ROSI3.209e-8948.10Uncharacterized protein OS=Citrus clementina GN=CI... [more]
U5GS09_POPTR1.973e-8448.02Uncharacterized protein OS=Populus trichocarpa GN=... [more]
W9S513_9ROSA1.066e-7847.38Uncharacterized protein OS=Morus notabilis GN=L484... [more]

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BLAST of g.arboreum_cottongen_reftransV1_0019423 vs. ExPASy Swiss-Prot
Analysis Date: 2016-11-15 (Homology Analysis for Gossypium arboreum CottonGen RefTrans V1 vs SwissProt)
Total hits: 0
Match NameE-valueIdentityDescription
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InterPro
Analysis Name: InterProScan analysis for Gossypium arboreum CottonGen RefTrans V1
Date Performed: 2016-11-14
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR39267:SF1SUBFAMILY NOT NAMEDcoord: 2..312
NoneNo IPR availablePANTHERPTHR39267FAMILY NOT NAMEDcoord: 2..312

Sequences
The following sequences are available for this feature:

contig sequence

>g.arboreum_cottongen_reftransV1_0019423 ID=g.arboreum_cottongen_reftransV1_0019423; Name=g.arboreum_cottongen_reftransV1_0019423; organism=Gossypium arboreum; type=contig; length=1396bp
GGAAACCTTCGAACGAAAACATGGGCAAAGAAAGTGAGCTTTGGGACGAC
TCCGCCCTCATCGATGCCTTCGACAACGCCATGTCCAAATATAAGAAAAT
GCATGGAAAGAAAAACAGTGAGGCCAATGTCTCTGTTTCTGTTCATCAAA
CCGGTGATGAGGCCATAAAACCCAGGGATGCAGGAGAGAACAGCAGTTCC
AGAGCTAATACTGGGATGGAAATGGAGGCGGCGAAGGATGTTGAACCAGT
TAAAGAAAATCATACTGTAAAGTTACAGACTCCTGAGACTTACATAGATT
CATCAACTAGTCTGCCAATGCAGGATAAGCAAGATGGGAATATGGCCTAT
TCGGATTCGCAAGCTGCGCAGGATTATAACCAATTACTCAACCAGTATTA
TGAGGTTGAAGACAAGAGGCAAATGATTCTGCAGCAGCTTCAGCAATTTG
GTAGTTGGAATTATCAATACTCGGGTGAGGGTTCTAGCACAGCTGCACAG
TGGGGTACCTCCTGTGCTTCTCAGGAGTATCCAATTCCTACAAGTCAAGC
TGCACACTCCACTGTCATCTGTTCGTGTTGCCCATATGCATGTCAATCTC
TGGCAACAACATGCACATCATATCCTTGCTGTTCTTTGGCTGGGACATCT
GTTGGTAAAATTAGCACTGAACCAAACGGTGCAATGGCTTATGGAAACTT
ACCACCTTTCATAGATTCCGACATTGTTAAAACAGCTATGGGAGCTGCAG
AAAAAGCTATATCCTCTATGACAACAAAAGCTTCTATTAATCCTAATGTA
AATGAAGAGAACAAGGAGAAGAAAGATGGTGAAGAGGAAATGAATCAAAG
TACTAGTTGTGAAACTGATCTCACTGTACTTTTAAATGCATGGTATTCTG
CCGGCTTCTATACAGGAAAGTACCTTGTGGAGCAGAGTATTGCTAAGAGA
AGGCAGTGATAAGCAATTCTTATTATGCAATGTGGACTGCTACAGGGCGA
GATCCCAGATATCAGTCGTCCTGCACATTGCATGGAATCCCTACATTTAT
TTGGTAGGCAAGAAAGGAACGTGAGAATGTATGACCAAGATACGAAGTGT
AGTAGACATGCTCGGATTTTGCAACAAATTCAAGAAATTATCAGATAACG
GCTGCATGGTTTAAGGAACAGCTTTGCTGATGATCCTGTTAATAGGGATT
TGTGTTGGAGTCTAAATAGTGCTAAGTTCGCTTAGGCATGTTACTTTGTT
AGATACTTTGGATTGCACAGCTTATTATGTGTTGCTTGTAGTGTTAGAAG
TAATGGGAAGGCCATCAAAGTGATCAACATTCATTTTTGTTAATTTGGGT
TGGATTCAACATAAGCTCAAATCCACTTAAGATCGTTGGCATAAAA
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