g.arboreum_cottongen_reftransV1_0003109, g.arboreum_cottongen_reftransV1_0003109 (contig) Gossypium arboreum

Overview
Nameg.arboreum_cottongen_reftransV1_0003109
Unique Nameg.arboreum_cottongen_reftransV1_0003109
Typecontig
OrganismGossypium arboreum (Tree cotton)
Sequence length871
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Chr5chromosomeg.arboreum_cottongen_reftransV1_0003109:1..871 .
Chr5:18795953..18800106 +
Homology
BLAST of g.arboreum_cottongen_reftransV1_0003109 vs. ExPASy TrEMBL
Match: F6MF11_GOSHI (Somatic embryogenesis receptor-like kinase 3 protein OS=Gossypium hirsutum GN=serk3 PE=2 SV=1)

HSP 1 Score: 378.252 bits (970), Expect = 1.492e-123
Identity = 203/204 (99.51%), Postives = 203/204 (99.51%), Query Frame = -3
Query:    3 MKENMTQRLISFCLWLIFVLDLAFRVAGNAEGDALNALKTNMVDPNNVLQSWDPTLVNPCTWFHVTCNSENSVTRVDLGNANLTGQLVPQLGSLPNLQYLELYSNNISGTIPDELGNLTELVSLDLYLNKLTGDIPTTLGQXXXXXXXXXXXXXLAGTIPRSLTTIDTLQVLDLSNNGLVGDVPVNGSFSLFTPISFANNKLNN 614
            MKENMTQRLISFCLWLIFV DLAFRVAGNAEGDALNALKTNMVDPNNVLQSWDPTLVNPCTWFHVTCNSENSVTRVDLGNANLTGQLVPQLGSLPNLQYLELYSNNISGTIPDELGNLTELVSLDLYLNKLTGDIPTTLGQLKKLRFLRLNNNSLAGTIPRSLTTIDTLQVLDLSNNGLVGDVPVNGSFSLFTPISFANNKLNN
Sbjct:    1 MKENMTQRLISFCLWLIFVFDLAFRVAGNAEGDALNALKTNMVDPNNVLQSWDPTLVNPCTWFHVTCNSENSVTRVDLGNANLTGQLVPQLGSLPNLQYLELYSNNISGTIPDELGNLTELVSLDLYLNKLTGDIPTTLGQLKKLRFLRLNNNSLAGTIPRSLTTIDTLQVLDLSNNGLVGDVPVNGSFSLFTPISFANNKLNN 204          
BLAST of g.arboreum_cottongen_reftransV1_0003109 vs. ExPASy TrEMBL
Match: A0A0D2NGT4_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_005G218200 PE=4 SV=1)

HSP 1 Score: 368.622 bits (945), Expect = 9.093e-120
Identity = 199/204 (97.55%), Postives = 200/204 (98.04%), Query Frame = -3
Query:    3 MKENMTQRLISFCLWLIFVLDLAFRVAGNAEGDALNALKTNMVDPNNVLQSWDPTLVNPCTWFHVTCNSENSVTRVDLGNANLTGQLVPQLGSLPNLQYLELYSNNISGTIPDELGNLTELVSLDLYLNKLTGDIPTTLGQXXXXXXXXXXXXXLAGTIPRSLTTIDTLQVLDLSNNGLVGDVPVNGSFSLFTPISFANNKLNN 614
            MKENMT+RLISFCLWLIFVLDLAFRVAGNAEGDALNALKTNM DPNNVLQSWDPTLVNPCTWFHVTCNSENSVTRVDLGNANLTGQLVPQLGSLPNLQYLELYSNNISG IPDELGNLTELVSLDLYLNKLTGDIPTTLGQLKKLRFLRLNNNSL GTIP SLTTIDTLQVLDLSNNGLVGDVPVNGSFSLFTPISFANNKLNN
Sbjct:    1 MKENMTRRLISFCLWLIFVLDLAFRVAGNAEGDALNALKTNMADPNNVLQSWDPTLVNPCTWFHVTCNSENSVTRVDLGNANLTGQLVPQLGSLPNLQYLELYSNNISGMIPDELGNLTELVSLDLYLNKLTGDIPTTLGQLKKLRFLRLNNNSLVGTIPLSLTTIDTLQVLDLSNNGLVGDVPVNGSFSLFTPISFANNKLNN 204          
BLAST of g.arboreum_cottongen_reftransV1_0003109 vs. ExPASy TrEMBL
Match: F5BZU9_GOSHI (Somatic embryogenesis receptor-like kinase 2 protein OS=Gossypium hirsutum GN=SERK2 PE=2 SV=1)

HSP 1 Score: 368.237 bits (944), Expect = 1.476e-119
Identity = 198/204 (97.06%), Postives = 200/204 (98.04%), Query Frame = -3
Query:    3 MKENMTQRLISFCLWLIFVLDLAFRVAGNAEGDALNALKTNMVDPNNVLQSWDPTLVNPCTWFHVTCNSENSVTRVDLGNANLTGQLVPQLGSLPNLQYLELYSNNISGTIPDELGNLTELVSLDLYLNKLTGDIPTTLGQXXXXXXXXXXXXXLAGTIPRSLTTIDTLQVLDLSNNGLVGDVPVNGSFSLFTPISFANNKLNN 614
            MKENMT+RLISFCLWLIFVLDLAFRVAGNAEGDALNALKTNM DPNNVLQSWDPTLVNPCTWFHVTCNSENSVTRVDLGNANLTGQLVPQLGSLPNLQYLELYSNNISG IPDELGNLTELVSLDLYLNKLTGDIPTTLGQLKKLRFLRLNNNSL GTIP SLTTIDTLQVLDLSNNGL+GDVPVNGSFSLFTPISFANNKLNN
Sbjct:    1 MKENMTRRLISFCLWLIFVLDLAFRVAGNAEGDALNALKTNMADPNNVLQSWDPTLVNPCTWFHVTCNSENSVTRVDLGNANLTGQLVPQLGSLPNLQYLELYSNNISGMIPDELGNLTELVSLDLYLNKLTGDIPTTLGQLKKLRFLRLNNNSLVGTIPLSLTTIDTLQVLDLSNNGLIGDVPVNGSFSLFTPISFANNKLNN 204          
BLAST of g.arboreum_cottongen_reftransV1_0003109 vs. ExPASy TrEMBL
Match: A0A061E3D3_THECC (BRI1-associated receptor kinase OS=Theobroma cacao GN=TCM_007534 PE=3 SV=1)

HSP 1 Score: 311.227 bits (796), Expect = 1.217e-97
Identity = 170/200 (85.00%), Postives = 182/200 (91.00%), Query Frame = -3
Query:    3 MTQRLISFCLWLIFVLDLAFRVAGNAEGDALNALKTNMVDPNNVLQSWDPTLVNPCTWFHVTCNSENSVTRVDLGNANLTGQLVPQLGSLPNLQYLELYSNNISGTIPDELGNLTELVSLDLYLNKLTGDIPTTLGQXXXXXXXXXXXXXLAGTIPRSLTTIDTLQVLDLSNNGLVGDVPVNGSFSLFTPISFANNKLNN 602
            M +RLIS  LWLI VLDLAFRVAGNAEGDALNALKTN+ DPNNVLQSWD TLVNPCTWFHVTCNSENSVTRVDLGNANL+GQLV QLG L NLQYLELYSNNI+G IP+ELGNLT LVSLDLYLN L G IPTTLG+L +LRFLRLNNNSL+G IP SLTT+++LQVLDLSNN LVGDVPVNGSFSLFTPISFANN+LNN
Sbjct:    1 MMERLISVTLWLILVLDLAFRVAGNAEGDALNALKTNLADPNNVLQSWDATLVNPCTWFHVTCNSENSVTRVDLGNANLSGQLVSQLGQLTNLQYLELYSNNITGIIPEELGNLTNLVSLDLYLNGLNGHIPTTLGKLTRLRFLRLNNNSLSGQIPMSLTTVNSLQVLDLSNNLLVGDVPVNGSFSLFTPISFANNRLNN 200          
BLAST of g.arboreum_cottongen_reftransV1_0003109 vs. ExPASy TrEMBL
Match: A0A0D2VZD5_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_012G140900 PE=4 SV=1)

HSP 1 Score: 308.531 bits (789), Expect = 1.361e-96
Identity = 168/200 (84.00%), Postives = 181/200 (90.50%), Query Frame = -3
Query:    3 MTQRLISFCLWLIFVLDLAFRVAGNAEGDALNALKTNMVDPNNVLQSWDPTLVNPCTWFHVTCNSENSVTRVDLGNANLTGQLVPQLGSLPNLQYLELYSNNISGTIPDELGNLTELVSLDLYLNKLTGDIPTTLGQXXXXXXXXXXXXXLAGTIPRSLTTIDTLQVLDLSNNGLVGDVPVNGSFSLFTPISFANNKLNN 602
            M +RLIS CL LI VLDL FRV+GNAEGDALNALK NM DPN+VLQSWD TLVNPCTWFHVTCNSENSVTRVDLGNANL+GQLVPQLG LPNLQYLELYSNNISG IP++LGNLT LVSLDLYLN LTG IP+TLG+L+KLRFLRLNNN+LAG IP  LTTI +LQVLDLSNN L GD+PVNGSFSLFTPISFANN+LNN
Sbjct:    1 MMERLISVCLQLILVLDLVFRVSGNAEGDALNALKNNMADPNSVLQSWDSTLVNPCTWFHVTCNSENSVTRVDLGNANLSGQLVPQLGQLPNLQYLELYSNNISGIIPEDLGNLTNLVSLDLYLNTLTGHIPSTLGKLQKLRFLRLNNNTLAGQIPMPLTTIMSLQVLDLSNNKLEGDIPVNGSFSLFTPISFANNRLNN 200          
BLAST of g.arboreum_cottongen_reftransV1_0003109 vs. ExPASy TrEMBL
Match: A0A0D2V5B9_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_012G140900 PE=4 SV=1)

HSP 1 Score: 308.145 bits (788), Expect = 1.826e-96
Identity = 168/200 (84.00%), Postives = 181/200 (90.50%), Query Frame = -3
Query:    3 MTQRLISFCLWLIFVLDLAFRVAGNAEGDALNALKTNMVDPNNVLQSWDPTLVNPCTWFHVTCNSENSVTRVDLGNANLTGQLVPQLGSLPNLQYLELYSNNISGTIPDELGNLTELVSLDLYLNKLTGDIPTTLGQXXXXXXXXXXXXXLAGTIPRSLTTIDTLQVLDLSNNGLVGDVPVNGSFSLFTPISFANNKLNN 602
            M +RLIS CL LI VLDL FRV+GNAEGDALNALK NM DPN+VLQSWD TLVNPCTWFHVTCNSENSVTRVDLGNANL+GQLVPQLG LPNLQYLELYSNNISG IP++LGNLT LVSLDLYLN LTG IP+TLG+L+KLRFLRLNNN+LAG IP  LTTI +LQVLDLSNN L GD+PVNGSFSLFTPISFANN+LNN
Sbjct:    1 MMERLISVCLQLILVLDLVFRVSGNAEGDALNALKNNMADPNSVLQSWDSTLVNPCTWFHVTCNSENSVTRVDLGNANLSGQLVPQLGQLPNLQYLELYSNNISGIIPEDLGNLTNLVSLDLYLNTLTGHIPSTLGKLQKLRFLRLNNNTLAGQIPMPLTTIMSLQVLDLSNNKLEGDIPVNGSFSLFTPISFANNRLNN 200          
BLAST of g.arboreum_cottongen_reftransV1_0003109 vs. ExPASy TrEMBL
Match: A0A0A1DZF0_GOSHI (Somatic embryogenesis receptor-like kinase 4 protein OS=Gossypium hirsutum GN=SERK4 PE=2 SV=1)

HSP 1 Score: 306.605 bits (784), Expect = 8.273e-96
Identity = 166/200 (83.00%), Postives = 181/200 (90.50%), Query Frame = -3
Query:    3 MTQRLISFCLWLIFVLDLAFRVAGNAEGDALNALKTNMVDPNNVLQSWDPTLVNPCTWFHVTCNSENSVTRVDLGNANLTGQLVPQLGSLPNLQYLELYSNNISGTIPDELGNLTELVSLDLYLNKLTGDIPTTLGQXXXXXXXXXXXXXLAGTIPRSLTTIDTLQVLDLSNNGLVGDVPVNGSFSLFTPISFANNKLNN 602
            M +RLIS CL LI VLDL FR++GNAEGDALNALK N+ DPN+VLQSWD TLVNPCTWFHVTCNSENSVTRVDLGNANL+GQLVPQLG LPNLQYLELYSNNISG IP++LGNLT LVSLDLYLN LTG IP+TLG+L+KLRFLRLNNN+LAG IP  LTTI +LQVLDLSNN L GD+PVNGSFSLFTPISFANN+LNN
Sbjct:    1 MMERLISVCLQLILVLDLVFRISGNAEGDALNALKNNLADPNSVLQSWDSTLVNPCTWFHVTCNSENSVTRVDLGNANLSGQLVPQLGQLPNLQYLELYSNNISGIIPEDLGNLTNLVSLDLYLNTLTGHIPSTLGKLQKLRFLRLNNNTLAGQIPMPLTTIMSLQVLDLSNNKLEGDIPVNGSFSLFTPISFANNRLNN 200          
BLAST of g.arboreum_cottongen_reftransV1_0003109 vs. ExPASy TrEMBL
Match: A0A0D2TW42_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_013G063200 PE=4 SV=1)

HSP 1 Score: 296.204 bits (757), Expect = 6.999e-92
Identity = 160/197 (81.22%), Postives = 172/197 (87.31%), Query Frame = -3
Query:    6 QRLISFCLWLIFVLDLAFRVAGNAEGDALNALKTNMVDPNNVLQSWDPTLVNPCTWFHVTCNSENSVTRVDLGNANLTGQLVPQLGSLPNLQYLELYSNNISGTIPDELGNLTELVSLDLYLNKLTGDIPTTLGQXXXXXXXXXXXXXLAGTIPRSLTTIDTLQVLDLSNNGLVGDVPVNGSFSLFTPISFANNKLN 596
            +R +  CLWLI VL+L FR AGNAEGDALNALKTNM DPNNVLQSWD TLVNPCTWFHVTCN+ENSVTRVDLGNANL+GQLV QLG LPNLQYLELYSN I+GTIP+ELGNLT LVSLDLYLN LTG IPTTLG+L KLRFLRLNNN+L G IPR LT I++LQVLDLSNN L GD+PV GSFSLFTPISF NN L 
Sbjct:    2 ERFVPLCLWLILVLELVFRAAGNAEGDALNALKTNMADPNNVLQSWDATLVNPCTWFHVTCNNENSVTRVDLGNANLSGQLVAQLGQLPNLQYLELYSNKITGTIPEELGNLTNLVSLDLYLNNLTGGIPTTLGKLTKLRFLRLNNNTLTGQIPRVLTAINSLQVLDLSNNRLEGDIPVTGSFSLFTPISFNNNLLR 198          
BLAST of g.arboreum_cottongen_reftransV1_0003109 vs. ExPASy TrEMBL
Match: A0A0D2TW39_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_013G062900 PE=4 SV=1)

HSP 1 Score: 279.641 bits (714), Expect = 5.638e-90
Identity = 151/197 (76.65%), Postives = 170/197 (86.29%), Query Frame = -3
Query:    6 QRLISFCLWLIFVLDLAFRVAGNAEGDALNALKTNMVDPNNVLQSWDPTLVNPCTWFHVTCNSENSVTRVDLGNANLTGQLVPQLGSLPNLQYLELYSNNISGTIPDELGNLTELVSLDLYLNKLTGDIPTTLGQXXXXXXXXXXXXXLAGTIPRSLTTIDTLQVLDLSNNGLVGDVPVNGSFSLFTPISFANNKLN 596
            +RLIS CLWLI  L L  RVAGNAEGDALNALK N+ DPNN+LQ WDPT +NPC W+++TCN ENSVTR+DLGNA L+G+LVP LG L NLQYLELYSNNISG IP+E+GNLT LVSLDLYLN LTG IP TLG+L+KLRFLRLNNNSL G IP +LTTIDTLQVLD+SNN L GD+PVNGSFSLF PISF+NN+LN
Sbjct:    2 ERLISVCLWLILALHLVLRVAGNAEGDALNALKNNLADPNNLLQDWDPTDINPCQWYNITCNGENSVTRIDLGNAKLSGKLVPDLGLLSNLQYLELYSNNISGEIPEEIGNLTNLVSLDLYLNVLTGHIPATLGKLRKLRFLRLNNNSLTGQIPMALTTIDTLQVLDVSNNQLEGDIPVNGSFSLFQPISFSNNRLN 198          
BLAST of g.arboreum_cottongen_reftransV1_0003109 vs. ExPASy TrEMBL
Match: A0A0B0PZP1_GOSAR (BRASSINOSTEROID INSENSITIVE 1-associated receptor kinase 1 OS=Gossypium arboreum GN=F383_15318 PE=4 SV=1)

HSP 1 Score: 291.967 bits (746), Expect = 1.950e-89
Identity = 181/273 (66.30%), Postives = 192/273 (70.33%), Query Frame = -3
Query:    3 MKENMTQRLISFCLWLIFVLDLAFRVAGNAEGDALNALKTNMVDPNNVLQSWDPTLVNPCTWFHVTCNSENSVTRVDLGNANLTGQLVPQLGSLPNLQY--------------------------------LELYS-NNISGTIP-----------DELGNLTELVSL-DLYLNKLTG------------------------DIPTTLGQXXXXXXXXXXXXXLAGTIPRSLTTIDTLQVLDLSNNGLVGDVPVNGSFSLFTPISFANNKLNN 614
            MKENMTQRLISFCLWLIFVLDLAFRVAGNAEGDALNALKTNMVDPNNVLQSWDPTLVNPCTWFHVTCNSENSVTRVDLGNANLTGQLVPQLGSLPNLQY                                LE++    +SG +P             LG +  ++ + +LY N ++G                        DIPTTLGQLKKLRFLRLNNNSLAGTIPRSLTTIDTLQVLDLSNNGLVGDVPVNGSFSLFTPISFANNKLNN
Sbjct:    1 MKENMTQRLISFCLWLIFVLDLAFRVAGNAEGDALNALKTNMVDPNNVLQSWDPTLVNPCTWFHVTCNSENSVTRVDLGNANLTGQLVPQLGSLPNLQYLMPDLNSKFQVLLKGTRCTLDLRTPIQGARTLLEIFEVTTLSGAVPLCLVLRPDNNASTLGKVDMVLHVPELYSNNISGTIPDELGNLTELVSLDLYLNKLTGDIPTTLGQLKKLRFLRLNNNSLAGTIPRSLTTIDTLQVLDLSNNGLVGDVPVNGSFSLFTPISFANNKLNN 273          
BLAST of g.arboreum_cottongen_reftransV1_0003109 vs. ExPASy Swiss-Prot
Match: BAK1_ARATH (BRASSINOSTEROID INSENSITIVE 1-associated receptor kinase 1 OS=Arabidopsis thaliana GN=BAK1 PE=1 SV=2)

HSP 1 Score: 284.648 bits (727), Expect = 2.149e-89
Identity = 158/198 (79.80%), Postives = 175/198 (88.38%), Query Frame = -3
Query:   12 MTQRLISFCL-WLIFVLDLAFRVAGNAEGDALNALKTNMVDPNNVLQSWDPTLVNPCTWFHVTCNSENSVTRVDLGNANLTGQLVPQLGSLPNLQYLELYSNNISGTIPDELGNLTELVSLDLYLNKLTGDIPTTLGQXXXXXXXXXXXXXLAGTIPRSLTTIDTLQVLDLSNNGLVGDVPVNGSFSLFTPISFANNK 602
            M +RL+  C  WLI VLDL  RV+GNAEGDAL+ALK ++ DPN VLQSWD TLV PCTWFHVTCNS+NSVTRVDLGNANL+GQLV QLG LPNLQYLELYSNNI+GTIP++LGNLTELVSLDLYLN L+G IP+TLG+LKKLRFLRLNNNSL+G IPRSLT + TLQVLDLSNN L GD+PVNGSFSLFTPISFAN K
Sbjct:    1 MERRLMIPCFFWLILVLDLVLRVSGNAEGDALSALKNSLADPNKVLQSWDATLVTPCTWFHVTCNSDNSVTRVDLGNANLSGQLVMQLGQLPNLQYLELYSNNITGTIPEQLGNLTELVSLDLYLNNLSGPIPSTLGRLKKLRFLRLNNNSLSGEIPRSLTAVLTLQVLDLSNNPLTGDIPVNGSFSLFTPISFANTK 198          
BLAST of g.arboreum_cottongen_reftransV1_0003109 vs. ExPASy Swiss-Prot
Match: SERK2_ARATH (Somatic embryogenesis receptor kinase 2 OS=Arabidopsis thaliana GN=SERK2 PE=1 SV=1)

HSP 1 Score: 246.514 bits (628), Expect = 1.152e-74
Identity = 138/175 (78.86%), Postives = 151/175 (86.29%), Query Frame = -3
Query:   15 VAGNAEGDALNALKTNMVDPNNVLQSWDPTLVNPCTWFHVTCNSENSVTRVDLGNANLTGQLVPQLGSLPNLQYLELYSNNISGTIPDELGNLTELVSLDLYLNKLTGDIPTTLGQXXXXXXXXXXXXXLAGTIPRSLTTIDTLQVLDLSNNGLVGDVPVNGSFSLFTPISFANN 539
             + N EGDAL++L+ N+VDPNNVLQSWDPTLVNPCTWFHVTCN+ENSV RVDLGNA+L+GQLVPQLG L NLQYLELYSNNI+G +P +LGNLT LVSLDLYLN  TG IP +LG+L KLRFLRLNNNSL G IP SLT I TLQVLDLSNN L G VP NGSFSLFTPISFANN
Sbjct:   27 ASSNMEGDALHSLRANLVDPNNVLQSWDPTLVNPCTWFHVTCNNENSVIRVDLGNADLSGQLVPQLGQLKNLQYLELYSNNITGPVPSDLGNLTNLVSLDLYLNSFTGPIPDSLGKLFKLRFLRLNNNSLTGPIPMSLTNIMTLQVLDLSNNRLSGSVPDNGSFSLFTPISFANN 201          
BLAST of g.arboreum_cottongen_reftransV1_0003109 vs. ExPASy Swiss-Prot
Match: SERK1_ARATH (Somatic embryogenesis receptor kinase 1 OS=Arabidopsis thaliana GN=SERK1 PE=1 SV=2)

HSP 1 Score: 239.965 bits (611), Expect = 3.491e-72
Identity = 135/175 (77.14%), Postives = 147/175 (84.00%), Query Frame = -3
Query:   15 VAGNAEGDALNALKTNMVDPNNVLQSWDPTLVNPCTWFHVTCNSENSVTRVDLGNANLTGQLVPQLGSLPNLQYLELYSNNISGTIPDELGNLTELVSLDLYLNKLTGDIPTTLGQXXXXXXXXXXXXXLAGTIPRSLTTIDTLQVLDLSNNGLVGDVPVNGSFSLFTPISFANN 539
             + N EGDAL+ L+  +VDPNNVLQSWDPTLVNPCTWFHVTCN+ENSV RVDLGNA L+G LVP+LG L NLQYLELYSNNI+G IP  LGNLT LVSLDLYLN  +G IP +LG+L KLRFLRLNNNSL G+IP SLT I TLQVLDLSNN L G VP NGSFSLFTPISFANN
Sbjct:   24 ASANLEGDALHTLRVTLVDPNNVLQSWDPTLVNPCTWFHVTCNNENSVIRVDLGNAELSGHLVPELGVLKNLQYLELYSNNITGPIPSNLGNLTNLVSLDLYLNSFSGPIPESLGKLSKLRFLRLNNNSLTGSIPMSLTNITTLQVLDLSNNRLSGSVPDNGSFSLFTPISFANN 198          
BLAST of g.arboreum_cottongen_reftransV1_0003109 vs. ExPASy Swiss-Prot
Match: SERK4_ARATH (Somatic embryogenesis receptor kinase 4 OS=Arabidopsis thaliana GN=SERK4 PE=1 SV=2)

HSP 1 Score: 235.343 bits (599), Expect = 1.461e-70
Identity = 135/183 (73.77%), Postives = 155/183 (84.70%), Query Frame = -3
Query:    3 RVAGNAEGDALNALKTNMV--DP-NNVLQSWDPTLVNPCTWFHVTCNSENSVTRVDLGNANLTGQLVPQLGSLPNLQYLELYSNNISGTIPDELGNLTELVSLDLYLNKLTGDIPTTLGQXXXXXXXXXXXXXLAGTIPRSLTTIDTLQVLDLSNNGLVGDVPVNGSFSLFTPISFANNKLNN 542
            RVAGNAEGDAL  LK ++   DP NNVLQSWD TLV PCTWFHVTCN EN VTRVDLGNA L+G+LVP+LG L NLQYLELYSNNI+G IP+ELG+L ELVSLDLY N ++G IP++LG+L KLRFLRLNNNSL+G IP +LT++  LQVLD+SNN L GD+PVNGSFSLFTPISFANN L +
Sbjct:   26 RVAGNAEGDALTQLKNSLSSGDPANNVLQSWDATLVTPCTWFHVTCNPENKVTRVDLGNAKLSGKLVPELGQLLNLQYLELYSNNITGEIPEELGDLVELVSLDLYANSISGPIPSSLGKLGKLRFLRLNNNSLSGEIPMTLTSVQ-LQVLDISNNRLSGDIPVNGSFSLFTPISFANNSLTD 207          
BLAST of g.arboreum_cottongen_reftransV1_0003109 vs. ExPASy Swiss-Prot
Match: SERK5_ARATH (Somatic embryogenesis receptor kinase 5 OS=Arabidopsis thaliana GN=SERK5 PE=1 SV=2)

HSP 1 Score: 224.172 bits (570), Expect = 1.714e-66
Identity = 125/192 (65.10%), Postives = 155/192 (80.73%), Query Frame = -3
Query:    9 LWLIFVLDLAFRVAGNAEGDALNALKTNMV---DPNNVLQSWDPTLVNPCTWFHVTCNSENSVTRVDLGNANLTGQLVPQLGSLPNLQYLELYSNNISGTIPDELGNLTELVSLDLYLNKLTGDIPTTLGQXXXXXXXXXXXXXLAGTIPRSLTTIDTLQVLDLSNNGLVGDVPVNGSFSLFTPISFANNKL 575
            +WLI  LD   RV G  + DAL AL++++      NN+LQSW+ T V PC+WFHVTCN+ENSVTR+DLG+ANL+G+LVPQL  LPNLQYLEL++NNI+G IP+ELG+L ELVSLDL+ N ++G IP++LG+L KLRFLRL NNSL+G IPRSLT +  L VLD+SNN L GD+PVNGSFS FT +SFANNKL
Sbjct:   10 IWLILFLDFVSRVTGKTQVDALIALRSSLSSGDHTNNILQSWNATHVTPCSWFHVTCNTENSVTRLDLGSANLSGELVPQLAQLPNLQYLELFNNNITGEIPEELGDLMELVSLDLFANNISGPIPSSLGKLGKLRFLRLYNNSLSGEIPRSLTAL-PLDVLDISNNRLSGDIPVNGSFSQFTSMSFANNKL 200          
BLAST of g.arboreum_cottongen_reftransV1_0003109 vs. ExPASy Swiss-Prot
Match: Y5129_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At5g10290 OS=Arabidopsis thaliana GN=At5g10290 PE=2 SV=1)

HSP 1 Score: 112.464 bits (280), Expect = 2.999e-26
Identity = 87/196 (44.39%), Postives = 118/196 (60.20%), Query Frame = -3
Query:    6 ISFCLWLIFVLDLAFRVAGNAEGDALNALKTNMVDPNNVLQSWDPTLVNPCTWFHVTCNSENSVTRVDLGNANLTGQLVPQLGSLPNLQYLELYSNNISGTIPDELGNLTELVSLDLYLNKLTGDIPTTLGQXXXXXXXXXXXXXLAGTIPRSLTTIDTLQVLDLSNNGLVGDVPVNGSFSLFT--PISFANNKLN 587
            ++    L+F   L   V+ +A+GDAL AL+ ++    N L  W+   VNPCTW  V C+ +N VT + L + N +G L  ++G L NL+ L L  N I+G IP++ GNLT L SLDL  N+LTG IP+T+G LKKL+FL L+ N L GTIP SLT +  L  L L +N L G +P     SLF     +F +N LN
Sbjct:    9 MAMAFTLLFFACLCSFVSPDAQGDALFALRISLRALPNQLSDWNQNQVNPCTWSQVICDDKNFVTSLTLSDMNFSGTLSSRVGILENLKTLTLKGNGITGEIPEDFGNLTSLTSLDLEDNQLTGRIPSTIGNLKKLQFLTLSRNKLNGTIPESLTGLPNLLNLLLDSNSLSGQIPQ----SLFEIPKYNFTSNNLN 200          
BLAST of g.arboreum_cottongen_reftransV1_0003109 vs. ExPASy Swiss-Prot
Match: NIK2_ARATH (Protein NSP-INTERACTING KINASE 2 OS=Arabidopsis thaliana GN=NIK2 PE=1 SV=1)

HSP 1 Score: 110.538 bits (275), Expect = 1.490e-25
Identity = 75/156 (48.08%), Postives = 101/156 (64.74%), Query Frame = -3
Query:   63 NAEGDALNALKTNMVDPNNVLQSWDPTLVNPCTWFHVTCNSENSVTRVDLGNANLTGQLVPQLGSLPNLQYLELYSNNISGTIPDELGNLTELVSLDLYLNKLTGDIPTTLGQXXXXXXXXXXXXXLAGTIPRSLTTIDTLQVLDLSNNGLVGDVP 530
            N E  AL  +K+++ DP+ VL +WD T V+PC+W  +TC S+  V R++  + NL+G L   +G+L NLQ + L +N I+G IP E+G L +L +LDL  N  TG IP TL   K L++LR+NNNSL GTIP SL  +  L  LDLS N L G VP
Sbjct:   40 NFEVVALIGIKSSLTDPHGVLMNWDDTAVDPCSWNMITC-SDGFVIRLEAPSQNLSGTLSSSIGNLTNLQTVLLQNNYITGNIPHEIGKLMKLKTLDLSTNNFTGQIPFTLSYSKNLQYLRVNNNSLTGTIPSSLANMTQLTFLDLSYNNLSGPVP 194          
BLAST of g.arboreum_cottongen_reftransV1_0003109 vs. ExPASy Swiss-Prot
Match: NIK3_ARATH (Protein NSP-INTERACTING KINASE 3 OS=Arabidopsis thaliana GN=NIK3 PE=1 SV=1)

HSP 1 Score: 110.153 bits (274), Expect = 1.992e-25
Identity = 79/185 (42.70%), Postives = 115/185 (62.16%), Query Frame = -3
Query:   63 ISFCLW----LIFVLDLAFRVAG------NAEGDALNALKTNMVDPNNVLQSWDPTLVNPCTWFHVTCNSENSVTRVDLGNANLTGQLVPQLGSLPNLQYLELYSNNISGTIPDELGNLTELVSLDLYLNKLTGDIPTTLGQXXXXXXXXXXXXXLAGTIPRSLTTIDTLQVLDLSNNGLVGDVP 587
            + F +W    L+FV       A       N E  AL A+K  + DP  VL++WD   V+PC+W  V+C ++  V+ +DL + +L+G L P++G+L  LQ + L +N I+G IP+ +G L +L SLDL  N  TG+IP +LG+LK L +LRLNNNSL GT P SL+ I+ L ++D+S N L G +P
Sbjct:    4 VRFVVWRLGFLVFVWFFDISSATLSPTGVNYEVTALVAVKNELNDPYKVLENWDVNSVDPCSWRMVSC-TDGYVSSLDLPSQSLSGTLSPRIGNLTYLQSVVLQNNAITGPIPETIGRLEKLQSLDLSNNSFTGEIPASLGELKNLNYLRLNNNSLIGTCPESLSKIEGLTLVDISYNNLSGSLP 187          
BLAST of g.arboreum_cottongen_reftransV1_0003109 vs. ExPASy Swiss-Prot
Match: NIK1_ARATH (Protein NSP-INTERACTING KINASE 1 OS=Arabidopsis thaliana GN=NIK1 PE=1 SV=1)

HSP 1 Score: 110.153 bits (274), Expect = 2.002e-25
Identity = 81/181 (44.75%), Postives = 110/181 (60.77%), Query Frame = -3
Query:   63 SFCLWLIFVLDLAFRVAG-------NAEGDALNALKTNMVDPNNVLQSWDPTLVNPCTWFHVTCNSENSVTRVDLGNANLTGQLVPQLGSLPNLQYLELYSNNISGTIPDELGNLTELVSLDLYLNKLTGDIPTTLGQXXXXXXXXXXXXXLAGTIPRSLTTIDTLQVLDLSNNGLVGDVP 584
            SF  +L F+  L   V G       N E  AL  +K ++ DP+ VL +WD   V+PC+W  VTC+SEN V  +   + NL+G L P + +L NL+ + L +NNI G IP E+G LT L +LDL  N   G+IP ++G L+ L++LRLNNNSL+G  P SL+ +  L  LDLS N L G VP
Sbjct:   14 SFFCFLGFLCLLCSSVHGLLSPKGVNFEVQALMDIKASLHDPHGVLDNWDRDAVDPCSWTMVTCSSENFVIGLGTPSQNLSGTLSPSITNLTNLRIVLLQNNNIKGKIPAEIGRLTRLETLDLSDNFFHGEIPFSVGYLQSLQYLRLNNNSLSGVFPLSLSNMTQLAFLDLSYNNLSGPVP 194          
BLAST of g.arboreum_cottongen_reftransV1_0003109 vs. ExPASy Swiss-Prot
Match: Y4052_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At4g30520 OS=Arabidopsis thaliana GN=At4g30520 PE=2 SV=1)

HSP 1 Score: 109.768 bits (273), Expect = 2.581e-25
Identity = 72/156 (46.15%), Postives = 103/156 (66.03%), Query Frame = -3
Query:   63 NAEGDALNALKTNMVDPNNVLQSWDPTLVNPCTWFHVTCNSENSVTRVDLGNANLTGQLVPQLGSLPNLQYLELYSNNISGTIPDELGNLTELVSLDLYLNKLTGDIPTTLGQXXXXXXXXXXXXXLAGTIPRSLTTIDTLQVLDLSNNGLVGDVP 530
            N E +AL +++ N+ DP+  L +WD   V+PC+W  +TC+ +N V  +   + +L+G L   +G+L NL+ + L +NNISG IP ELG L +L +LDL  N+ +GDIP ++ QL  L++LRLNNNSL+G  P SL+ I  L  LDLS N L G VP
Sbjct:   35 NPEVEALISIRNNLHDPHGALNNWDEFSVDPCSWAMITCSPDNLVIGLGAPSQSLSGGLSESIGNLTNLRQVSLQNNNISGKIPPELGFLPKLQTLDLSNNRFSGDIPVSIDQLSSLQYLRLNNNSLSGPFPASLSQIPHLSFLDLSYNNLSGPVP 190          
The following BLAST results are available for this feature:
BLAST of g.arboreum_cottongen_reftransV1_0003109 vs. ExPASy TrEMBL
Analysis Date: 2016-11-15 (Homology Analysis for Gossypium arboreum CottonGen RefTrans V1 vs TrEMBL)
Total hits: 25
Match NameE-valueIdentityDescription
F6MF11_GOSHI1.492e-12399.51Somatic embryogenesis receptor-like kinase 3 prote... [more]
A0A0D2NGT4_GOSRA9.093e-12097.55Uncharacterized protein OS=Gossypium raimondii GN=... [more]
F5BZU9_GOSHI1.476e-11997.06Somatic embryogenesis receptor-like kinase 2 prote... [more]
A0A061E3D3_THECC1.217e-9785.00BRI1-associated receptor kinase OS=Theobroma cacao... [more]
A0A0D2VZD5_GOSRA1.361e-9684.00Uncharacterized protein OS=Gossypium raimondii GN=... [more]
A0A0D2V5B9_GOSRA1.826e-9684.00Uncharacterized protein OS=Gossypium raimondii GN=... [more]
A0A0A1DZF0_GOSHI8.273e-9683.00Somatic embryogenesis receptor-like kinase 4 prote... [more]
A0A0D2TW42_GOSRA6.999e-9281.22Uncharacterized protein OS=Gossypium raimondii GN=... [more]
A0A0D2TW39_GOSRA5.638e-9076.65Uncharacterized protein OS=Gossypium raimondii GN=... [more]
A0A0B0PZP1_GOSAR1.950e-8966.30BRASSINOSTEROID INSENSITIVE 1-associated receptor ... [more]

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BLAST of g.arboreum_cottongen_reftransV1_0003109 vs. ExPASy Swiss-Prot
Analysis Date: 2016-11-15 (Homology Analysis for Gossypium arboreum CottonGen RefTrans V1 vs SwissProt)
Total hits: 25
Match NameE-valueIdentityDescription
BAK1_ARATH2.149e-8979.80BRASSINOSTEROID INSENSITIVE 1-associated receptor ... [more]
SERK2_ARATH1.152e-7478.86Somatic embryogenesis receptor kinase 2 OS=Arabido... [more]
SERK1_ARATH3.491e-7277.14Somatic embryogenesis receptor kinase 1 OS=Arabido... [more]
SERK4_ARATH1.461e-7073.77Somatic embryogenesis receptor kinase 4 OS=Arabido... [more]
SERK5_ARATH1.714e-6665.10Somatic embryogenesis receptor kinase 5 OS=Arabido... [more]
Y5129_ARATH2.999e-2644.39Probable LRR receptor-like serine/threonine-protei... [more]
NIK2_ARATH1.490e-2548.08Protein NSP-INTERACTING KINASE 2 OS=Arabidopsis th... [more]
NIK3_ARATH1.992e-2542.70Protein NSP-INTERACTING KINASE 3 OS=Arabidopsis th... [more]
NIK1_ARATH2.002e-2544.75Protein NSP-INTERACTING KINASE 1 OS=Arabidopsis th... [more]
Y4052_ARATH2.581e-2546.15Probable LRR receptor-like serine/threonine-protei... [more]

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Sequences
The following sequences are available for this feature:

contig sequence

>g.arboreum_cottongen_reftransV1_0003109 ID=g.arboreum_cottongen_reftransV1_0003109; Name=g.arboreum_cottongen_reftransV1_0003109; organism=Gossypium arboreum; type=contig; length=871bp
GGATTATTGAGTTTATTATTGGCAAAACTGATAGGAGTGAATAGTGAAAA
GGAACCATTAACTGGAACATCTCCTACTAGGCCATTGTTTGAAAGATCCA
GCACTTGCAGTGTGTCAATAGTAGTTAAGGACCTAGGAATTGTTCCTGCC
AATGAGTTGTTGTTGAGACGCAAGAAACGGAGTTTTTTAAGCTGGCCCAG
AGTAGTCGGGATGTCTCCAGTTAATTTATTCAAGTAAAGATCCAAGCTCA
CCAATTCCGTCAAATTCCCCAGCTCGTCTGGGATTGTCCCAGATATGTTA
TTACTATAAAGCTCCAAATACTGCAAATTTGGAAGTGACCCCAGCTGTGG
AACCAGTTGACCAGTGAGATTTGCATTCCCAAGATCAACTCTTGTTACAC
TATTTTCACTATTACATGTAACATGAAACCATGTGCAAGGATTAACAAGG
GTTGGGTCCCAACTTTGTAACACATTATTAGGGTCAACCATATTGGTCTT
CAATGCATTCAAAGCATCACCTTCGGCATTTCCTGCAACTCTGAAAGCCA
AATCCAACACGAAAATCAACCATAAACAAAAGGAAATCAATCGCTGCGTC
ATATTTTCCTTCATTTTTGCCTACTTTTGATTTCAAAGAGCTAAATCCCC
AAATTCATCATCAATCATCCACTTGACGAATCGCGGAAACATCAATTCAG
TCTAAAACGAACATCACAAATCACACACATATCGGCCGTTGACCGAATCA
ACGAGCAAATAATTCAAAAAAGAAAAGAAAACAGCACGATACACTTCGAA
AAAGACTCTTCTATAATCTAAATCCAAAAGAGAGAATAGAAAATGCTCAA
GATTCCAGCAAAATTCTTGAT
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