g.arboreum_cottongen_reftransV1_0006205, g.arboreum_cottongen_reftransV1_0006205 (contig) Gossypium arboreum

Overview


Name	g.arboreum_cottongen_reftransV1_0006205
Unique Name	g.arboreum_cottongen_reftransV1_0006205
Type	contig
Organism	Gossypium arboreum (Tree cotton)
Sequence length	820

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
Chr12	chromosome	g.arboreum_cottongen_reftransV1_0006205:1..820 . Chr12:115128122..115128941 -

Analyses

This contig is derived from or has results from the following analyses


Analysis Name	Date Performed
Gossypium arboreum CottonGen RefTrans V1	2016-11-14
InterProScan analysis for Gossypium arboreum CottonGen RefTrans V1	2016-11-14
Homology Analysis for Gossypium arboreum CottonGen RefTrans V1 vs TrEMBL	2016-11-15
Homology Analysis for Gossypium arboreum CottonGen RefTrans V1 vs SwissProt	2016-11-15

Homology

[Close]

BLAST of g.arboreum_cottongen_reftransV1_0006205 vs. ExPASy TrEMBL
Match: A0A0D2SGF0_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_007G084100 PE=4 SV=1)

HSP 1 Score: 382.489 bits (981), Expect = 1.071e-128
Identity = 229/231 (99.13%), Postives = 230/231 (99.57%), Query Frame = -2

Query:  127 LAFNAVFSYLLNSQKLTXXXXXXXXXXXXXXXXXXXNEDSDGPSGVSKGKYLVGFICTXXXXXXXXXXXXXXXXSFQKVLRKETYNVVLEMQIYTSLVATCVSTAGLFGSGEWKGLQDEMKGFKSGRVSYVLTLVWAAVSWQVCAVGVVGLIFAVSSLFSNVISTLSLAITPLAALLVFHDEMNGVKVIAMLLALCGFCSYIYQNYLDDTKARKSESQSHTDDVIQESHHV 819
            LAFNAVFSYLLNSQKLTALILNSVVILSLSAALIAVNEDSDGPSGVSKGKYLVGFICTLGASALYSLLLSLMQLSFQKVLRKETYNVVLEMQIYTSLVATCVSTAG+FGSGEWKGLQDEMKGFKSGRVSYVLTLVW AVSWQVCAVGVVGLIFAVSSLFSNVISTLSLAITPLAALLVFHDEMNGVKVIAMLLALCGFCSYIYQNYLDDTKARKSESQSHTDDVIQESHHV
Sbjct:  141 LAFNAVFSYLLNSQKLTALILNSVVILSLSAALIAVNEDSDGPSGVSKGKYLVGFICTLGASALYSLLLSLMQLSFQKVLRKETYNVVLEMQIYTSLVATCVSTAGMFGSGEWKGLQDEMKGFKSGRVSYVLTLVWTAVSWQVCAVGVVGLIFAVSSLFSNVISTLSLAITPLAALLVFHDEMNGVKVIAMLLALCGFCSYIYQNYLDDTKARKSESQSHTDDVIQESHHV 371

[Close]

BLAST of g.arboreum_cottongen_reftransV1_0006205 vs. ExPASy TrEMBL
Match: A0A061DV33_THECC (Purine permease 11 isoform 2 OS=Theobroma cacao GN=TCM_005801 PE=4 SV=1)

HSP 1 Score: 303.138 bits (775), Expect = 5.340e-98
Identity = 188/229 (82.10%), Postives = 209/229 (91.27%), Query Frame = -2

Query:  133 LAFNAVFSYLLNSQKLTXXXXXXXXXXXXXXXXXXXNEDSDGPSGVSKGKYLVGFICTXXXXXXXXXXXXXXXXSFQKVLRKETYNVVLEMQIYTSLVATCVSTAGLFGSGEWKGLQDEMKGFKSGRVSYVLTLVWAAVSWQVCAVGVVGLIFAVSSLFSNVISTLSLAITPLAALLVFHDEMNGVKVIAMLLALCGFCSYIYQNYLDDTKARKSESQSHTDDVIQESH 819
            LAFNAVFS+ LNSQK TALILNSVVILSLSAALIAVN+DS+GPSGVSKGK+L+GF+CT+GASALYSLLLSLMQLSFQKVL+KET++VVLEMQIYTSLVA+CVST GLF SGEWK L  EM+ F SGRVSYVLTLVW AV+WQVCAVGVVGLIF VSSLFSNVISTLSLA+TPLAAL+VFHD+MNGVKVIAMLLALCGF SYIYQNYLDD KAR+S++       +QE+H
Sbjct:  124 LAFNAVFSFFLNSQKFTALILNSVVILSLSAALIAVNDDSEGPSGVSKGKFLLGFLCTVGASALYSLLLSLMQLSFQKVLKKETFSVVLEMQIYTSLVASCVSTVGLFASGEWKTLHHEMEDFNSGRVSYVLTLVWTAVTWQVCAVGVVGLIFVVSSLFSNVISTLSLAVTPLAALVVFHDKMNGVKVIAMLLALCGFASYIYQNYLDDKKARRSQTD------VQENH 346

[Close]

BLAST of g.arboreum_cottongen_reftransV1_0006205 vs. ExPASy TrEMBL
Match: A0A061DUU7_THECC (Purine permease 11 isoform 1 OS=Theobroma cacao GN=TCM_005801 PE=4 SV=1)

HSP 1 Score: 303.138 bits (775), Expect = 1.001e-97
Identity = 188/229 (82.10%), Postives = 209/229 (91.27%), Query Frame = -2

Query:  133 LAFNAVFSYLLNSQKLTXXXXXXXXXXXXXXXXXXXNEDSDGPSGVSKGKYLVGFICTXXXXXXXXXXXXXXXXSFQKVLRKETYNVVLEMQIYTSLVATCVSTAGLFGSGEWKGLQDEMKGFKSGRVSYVLTLVWAAVSWQVCAVGVVGLIFAVSSLFSNVISTLSLAITPLAALLVFHDEMNGVKVIAMLLALCGFCSYIYQNYLDDTKARKSESQSHTDDVIQESH 819
            LAFNAVFS+ LNSQK TALILNSVVILSLSAALIAVN+DS+GPSGVSKGK+L+GF+CT+GASALYSLLLSLMQLSFQKVL+KET++VVLEMQIYTSLVA+CVST GLF SGEWK L  EM+ F SGRVSYVLTLVW AV+WQVCAVGVVGLIF VSSLFSNVISTLSLA+TPLAAL+VFHD+MNGVKVIAMLLALCGF SYIYQNYLDD KAR+S++       +QE+H
Sbjct:  139 LAFNAVFSFFLNSQKFTALILNSVVILSLSAALIAVNDDSEGPSGVSKGKFLLGFLCTVGASALYSLLLSLMQLSFQKVLKKETFSVVLEMQIYTSLVASCVSTVGLFASGEWKTLHHEMEDFNSGRVSYVLTLVWTAVTWQVCAVGVVGLIFVVSSLFSNVISTLSLAVTPLAALVVFHDKMNGVKVIAMLLALCGFASYIYQNYLDDKKARRSQTD------VQENH 361

[Close]

BLAST of g.arboreum_cottongen_reftransV1_0006205 vs. ExPASy TrEMBL
Match: A0A0D2PSU4_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_008G111600 PE=4 SV=1)

HSP 1 Score: 297.745 bits (761), Expect = 1.241e-95
Identity = 183/224 (81.70%), Postives = 204/224 (91.07%), Query Frame = -2

Query:  148 LAFNAVFSYLLNSQKLTXXXXXXXXXXXXXXXXXXXNEDSDGPSGVSKGKYLVGFICTXXXXXXXXXXXXXXXXSFQKVLRKETYNVVLEMQIYTSLVATCVSTAGLFGSGEWKGLQDEMKGFKSGRVSYVLTLVWAAVSWQVCAVGVVGLIFAVSSLFSNVISTLSLAITPLAALLVFHDEMNGVKVIAMLLALCGFCSYIYQNYLDDTKARKSESQSHTDDV 819
            LAFNAVFSY LNSQK TALILNSVVILSLSAALIAVN+DSDGPSGV KGK+L+GF+CTLGASALYSLLLS MQLSFQKVL+KET++VVLEMQIYTS+VA+C+ST GLF SGEWK LQ EM+ F +GRVSYVLTLVW A++WQVCAVGVVGLIF VSSLFSNVISTLSLA+TPLAAL+VFHD+MNGVKVIAMLLALCGF SYIYQNY+DD KAR    Q+H  ++
Sbjct:  139 LAFNAVFSYFLNSQKFTALILNSVVILSLSAALIAVNDDSDGPSGVPKGKFLIGFLCTLGASALYSLLLSFMQLSFQKVLKKETFSVVLEMQIYTSVVASCLSTIGLFASGEWKSLQHEMEVFGTGRVSYVLTLVWTAITWQVCAVGVVGLIFVVSSLFSNVISTLSLAVTPLAALVVFHDKMNGVKVIAMLLALCGFASYIYQNYIDDKKART--LQTHVREI 360

[Close]

BLAST of g.arboreum_cottongen_reftransV1_0006205 vs. ExPASy TrEMBL
Match: A0A0B2S886_GLYSO (Putative purine permease 11 OS=Glycine soja GN=glysoja_001002 PE=4 SV=1)

HSP 1 Score: 284.648 bits (727), Expect = 2.479e-91
Identity = 165/225 (73.33%), Postives = 201/225 (89.33%), Query Frame = -2

Query:  151 LAFNAVFSYLLNSQKLTXXXXXXXXXXXXXXXXXXXNEDSDGPSGVSKGKYLVGFICTXXXXXXXXXXXXXXXXSFQKVLRKETYNVVLEMQIYTSLVATCVSTAGLFGSGEWKGLQDEMKGFKSGRVSYVLTLVWAAVSWQVCAVGVVGLIFAVSSLFSNVISTLSLAITPLAALLVFHDEMNGVKVIAMLLALCGFCSYIYQNYLDDTKARKSE--SQSHTDD 819
            LAFNAVFSY +NSQK TALI+NS V+L+LSAAL+AVNEDSD PSG+S GKY++GF+CTLGASA+YSLLLSLMQL+F+KVL+KET++VVL+MQIYTSLVATC S  GLF SGEW  L  EMKGF+ G V+YV+TLVW A++WQVC+VGVVGLIF VSSL+SNVIST+SLA+TP+AA++VFHD+MNGVK+I+MLLAL GF SYIYQNYLDD+KAR ++  ++SH D 
Sbjct:   75 LAFNAVFSYFINSQKFTALIINSTVVLTLSAALLAVNEDSDEPSGLSMGKYIIGFLCTLGASAVYSLLLSLMQLTFEKVLKKETFSVVLQMQIYTSLVATCASVIGLFASGEWHTLHGEMKGFQKGHVAYVMTLVWTAIAWQVCSVGVVGLIFLVSSLYSNVISTVSLAVTPIAAVIVFHDKMNGVKIISMLLALWGFASYIYQNYLDDSKARHAQAVAKSHNDS 299

[Close]

BLAST of g.arboreum_cottongen_reftransV1_0006205 vs. ExPASy TrEMBL
Match: W9RFX8_9ROSA (Uncharacterized protein OS=Morus notabilis GN=L484_023902 PE=4 SV=1)

HSP 1 Score: 281.182 bits (718), Expect = 4.470e-90
Identity = 169/227 (74.45%), Postives = 201/227 (88.55%), Query Frame = -2

Query:  148 LAFNAVFSYLLNSQKLTXXXXXXXXXXXXXXXXXXXNEDSDGPSGVSKGKYLVGFICTXXXXXXXXXXXXXXXXSFQKVLRKETYNVVLEMQIYTSLVATCVSTAGLFGSGEWKGLQDEMKGFKSGRVSYVLTLVWAAVSWQVCAVGVVGLIFAVSSLFSNVISTLSLAITPLAALLVFHDEMNGVKVIAMLLALCGFCSYIYQNYLDDTKARKS---ESQSHTDDV 819
            LAFNAVFSY +NSQK TAL+LNSVV+LSLSAALIAVN+DSDGP+GVSK KY++GFICTL ASA+YSLLLSLMQLSFQKVL++ET+ VVLEMQIYTSLVAT VS  GLF SGEW+ L  EM+GF  G  +YV+TLVW AV+WQVC+VGVVGLIF VSSLFSNVISTLSLA+TP+A+++VFHD+MNGVK++AML+A+ GF SYIYQNYLDD+KAR++   E++S  D V
Sbjct:   76 LAFNAVFSYFINSQKFTALVLNSVVVLSLSAALIAVNDDSDGPTGVSKAKYIIGFICTLAASAIYSLLLSLMQLSFQKVLKRETFTVVLEMQIYTSLVATSVSLIGLFASGEWRILHGEMQGFGKGGFAYVMTLVWTAVAWQVCSVGVVGLIFVVSSLFSNVISTLSLAVTPIASVIVFHDKMNGVKIVAMLMAIWGFASYIYQNYLDDSKARRTQTRETESQNDSV 302

[Close]

BLAST of g.arboreum_cottongen_reftransV1_0006205 vs. ExPASy TrEMBL
Match: I1N423_SOYBN (Uncharacterized protein OS=Glycine max PE=4 SV=2)

HSP 1 Score: 282.337 bits (721), Expect = 1.112e-89
Identity = 165/225 (73.33%), Postives = 201/225 (89.33%), Query Frame = -2

Query:  151 LAFNAVFSYLLNSQKLTXXXXXXXXXXXXXXXXXXXNEDSDGPSGVSKGKYLVGFICTXXXXXXXXXXXXXXXXSFQKVLRKETYNVVLEMQIYTSLVATCVSTAGLFGSGEWKGLQDEMKGFKSGRVSYVLTLVWAAVSWQVCAVGVVGLIFAVSSLFSNVISTLSLAITPLAALLVFHDEMNGVKVIAMLLALCGFCSYIYQNYLDDTKARKSE--SQSHTDD 819
            LAFNAVFSY +NSQK TALI+NS V+L+LSAAL+AVNEDSD PSG+S GKY++GF+CTLGASA+YSLLLSLMQL+F+KVL+KET++VVL+MQIYTSLVATC S  GLF SGEW  L  EMKGF+ G V+YV+TLVW A++WQVC+VGVVGLIF VSSL+SNVIST+SLA+TP+AA++VFHD+MNGVK+I+MLLAL GF SYIYQNYLDD+KAR ++  ++SH D 
Sbjct:  136 LAFNAVFSYFINSQKFTALIINSTVVLTLSAALLAVNEDSDEPSGLSMGKYIIGFLCTLGASAVYSLLLSLMQLTFEKVLKKETFSVVLQMQIYTSLVATCASVIGLFASGEWHTLHGEMKGFQKGHVAYVMTLVWTAIAWQVCSVGVVGLIFLVSSLYSNVISTVSLAVTPIAAVIVFHDKMNGVKIISMLLALWGFASYIYQNYLDDSKARHAQAVAKSHNDS 360

[Close]

BLAST of g.arboreum_cottongen_reftransV1_0006205 vs. ExPASy TrEMBL
Match: K7MUJ0_SOYBN (Uncharacterized protein OS=Glycine max PE=4 SV=1)

HSP 1 Score: 281.952 bits (720), Expect = 1.720e-89
Identity = 165/225 (73.33%), Postives = 201/225 (89.33%), Query Frame = -2

Query:  151 LAFNAVFSYLLNSQKLTXXXXXXXXXXXXXXXXXXXNEDSDGPSGVSKGKYLVGFICTXXXXXXXXXXXXXXXXSFQKVLRKETYNVVLEMQIYTSLVATCVSTAGLFGSGEWKGLQDEMKGFKSGRVSYVLTLVWAAVSWQVCAVGVVGLIFAVSSLFSNVISTLSLAITPLAALLVFHDEMNGVKVIAMLLALCGFCSYIYQNYLDDTKARKSE--SQSHTDD 819
            LAFNAVFSY +NSQK TALI+NS V+L+LSAAL+AVNEDSD PSG+S GKY++GF+CTLGASA+YSLLLSLMQL+F+KVL+KET++VVL+MQIYTSLVATC S  GLF SGEW  L  EMKGF+ G V+YV+TLVW A++WQVC+VGVVGLIF VSSL+SNVIST+SLA+TP+AA++VFHD+MNGVK+I+MLLAL GF SYIYQNYLDD+KAR ++  ++SH D 
Sbjct:  139 LAFNAVFSYFINSQKFTALIINSTVVLTLSAALLAVNEDSDEPSGLSMGKYIIGFLCTLGASAVYSLLLSLMQLTFEKVLKKETFSVVLQMQIYTSLVATCASVIGLFASGEWHTLHGEMKGFQKGHVAYVMTLVWTAIAWQVCSVGVVGLIFLVSSLYSNVISTVSLAVTPIAAVIVFHDKMNGVKIISMLLALWGFASYIYQNYLDDSKARHAQAVAKSHNDS 363

[Close]

BLAST of g.arboreum_cottongen_reftransV1_0006205 vs. ExPASy TrEMBL
Match: W9QQS4_9ROSA (Uncharacterized protein OS=Morus notabilis GN=L484_021136 PE=4 SV=1)

HSP 1 Score: 279.256 bits (713), Expect = 3.312e-88
Identity = 169/227 (74.45%), Postives = 201/227 (88.55%), Query Frame = -2

Query:  148 LAFNAVFSYLLNSQKLTXXXXXXXXXXXXXXXXXXXNEDSDGPSGVSKGKYLVGFICTXXXXXXXXXXXXXXXXSFQKVLRKETYNVVLEMQIYTSLVATCVSTAGLFGSGEWKGLQDEMKGFKSGRVSYVLTLVWAAVSWQVCAVGVVGLIFAVSSLFSNVISTLSLAITPLAALLVFHDEMNGVKVIAMLLALCGFCSYIYQNYLDDTKARKS---ESQSHTDDV 819
            LAFNAVFSY +NSQK TAL+LNSVV+LSLSAALIAVN+DSDGP+GVSK KY++GFICTL ASA+YSLLLSLMQLSFQKVL++ET+ VVLEMQIYTSLVAT VS  GLF SGEW+ L  EM+GF  G  +YV+TLVW AV+WQVC+VGVVGLIF VSSLFSNVISTLSLA+TP+A+++VFHD+MNGVK++AML+A+ GF SYIYQNYLDD+KAR++   E++S  D V
Sbjct:  163 LAFNAVFSYFINSQKFTALVLNSVVVLSLSAALIAVNDDSDGPTGVSKAKYIIGFICTLAASAIYSLLLSLMQLSFQKVLKRETFTVVLEMQIYTSLVATSVSLIGLFASGEWRILHGEMQGFGKGGFAYVMTLVWTAVAWQVCSVGVVGLIFVVSSLFSNVISTLSLAVTPIASVIVFHDKMNGVKIVAMLMAIWGFASYIYQNYLDDSKARRTQTRETESQNDSV 389

[Close]

BLAST of g.arboreum_cottongen_reftransV1_0006205 vs. ExPASy TrEMBL
Match: M5WZV3_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa007245mg PE=4 SV=1)

HSP 1 Score: 278.1 bits (710), Expect = 5.411e-88
Identity = 164/225 (72.89%), Postives = 201/225 (89.33%), Query Frame = -2

Query:  154 LAFNAVFSYLLNSQKLTXXXXXXXXXXXXXXXXXXXNEDSDGPSGVSKGKYLVGFICTXXXXXXXXXXXXXXXXSFQKVLRKETYNVVLEMQIYTSLVATCVSTAGLFGSGEWKGLQDEMKGFKSGRVSYVLTLVWAAVSWQVCAVGVVGLIFAVSSLFSNVISTLSLAITPLAALLVFHDEMNGVKVIAMLLALCGFCSYIYQNYLDDTKARKSE---SQSHTD 819
            LAFNAVFSY +NSQK TALILNSV+I+S SAALIAV++DS GP+GVSK K+++GFICTLGASA+YSLLLSLMQL+FQKVL+KET++VVLEMQIYT+LVA+C +T GLF SGEW+ L  EM+ F  GRVSYV+TLVW AV+WQVC+VGVVGLIF VSSLFSNVISTLSLA+TP+AA+++FHD+M+GVK+IAMLLA+ GF +YIYQNYLDD+K R+ +   ++SH D
Sbjct:  141 LAFNAVFSYFINSQKFTALILNSVIIVSFSAALIAVSDDSSGPAGVSKWKHILGFICTLGASAIYSLLLSLMQLTFQKVLKKETFSVVLEMQIYTALVASCAATVGLFASGEWRTLHGEMENFGEGRVSYVMTLVWTAVAWQVCSVGVVGLIFVVSSLFSNVISTLSLAVTPIAAVIIFHDKMDGVKIIAMLLAIWGFATYIYQNYLDDSKVRRRQTGVTESHND 365

[Close]

BLAST of g.arboreum_cottongen_reftransV1_0006205 vs. ExPASy Swiss-Prot
Match: PUP11_ARATH (Probable purine permease 11 OS=Arabidopsis thaliana GN=PUP11 PE=1 SV=1)

HSP 1 Score: 267.7 bits (683), Expect = 1.137e-85
Identity = 159/224 (70.98%), Postives = 195/224 (87.05%), Query Frame = -2

Query:  148 LAFNAVFSYLLNSQKLTXXXXXXXXXXXXXXXXXXXNEDSDGPSGVSKGKYLVGFICTXXXXXXXXXXXXXXXXSFQKVLRKETYNVVLEMQIYTSLVATCVSTAGLFGSGEWKGLQDEMKGFKSGRVSYVLTLVWAAVSWQVCAVGVVGLIFAVSSLFSNVISTLSLAITPLAALLVFHDEMNGVKVIAMLLALCGFCSYIYQNYLDDTKARKSESQSHTDDV 819
            LAFNAVFSY +N+QK TALILNSVV+LS SAALIA+N+D+D PSGVS+ KY+VGF+CTL ASALYSLLLSLMQ SF+K+L++ET++VVLEMQIYTSLVATCVS  GLF SGEW+ L  EM+G+  G+ SYVLTLVW AV+WQVC+VGVVGLIF V+SLFSNVISTLSLA+TPLAAL+VF D+M+GVK++AML+A+ GF SY+YQN++DD K R++  Q+    V
Sbjct:  152 LAFNAVFSYFINAQKFTALILNSVVLLSFSAALIALNDDADTPSGVSRSKYIVGFVCTLAASALYSLLLSLMQFSFEKILKRETFSVVLEMQIYTSLVATCVSVIGLFASGEWRTLHGEMEGYHKGQASYVLTLVWTAVTWQVCSVGVVGLIFLVTSLFSNVISTLSLAVTPLAALVVFRDKMSGVKIMAMLIAIWGFASYVYQNHIDDLKVRQARQQAQAGRV 375

[Close]

BLAST of g.arboreum_cottongen_reftransV1_0006205 vs. ExPASy Swiss-Prot
Match: PUP13_ARATH (Probable purine permease 13 OS=Arabidopsis thaliana GN=PUP13 PE=2 SV=1)

HSP 1 Score: 218.009 bits (554), Expect = 1.055e-66
Identity = 137/221 (61.99%), Postives = 172/221 (77.83%), Query Frame = -2

Query:  160 LAFNAVFSYLLNSQKLTXXXXXXXXXXXXXXXXXXXNEDSDGPSGVSKGKYLVGFICTXXXXXXXXXXXXXXXXSFQKVLRKETYNVVLEMQIYTSLVATCVSTAGLFGSGEWKGLQDEMKGFKSGRVSYVLTLVWAAVSWQVCAVGVVGLIFAVSSLFSNVISTLSLAITPLAALLVFHDEMNGVKVIAMLLALCGFCSYIYQNYLDDTKA-RKSESQSH 819
            LAFN VFSY +NSQK+T LIL SV+ LS+SA L+++++DS+ PSG SK  YL+G +CT+ AS +YSL LSLMQ SF+ VL+ ET+++VLEMQIYTSLVA+CV+  GLF SGEW  L  EM+ F  G+V YVLTLV  AVSWQ+ +VG V LIF VSSLFSN+I TLSL +TPLAA+ VFHD++  VK++AML+A  GF  YIYQNYLDD K  R  E+Q+ 
Sbjct:  141 LAFNGVFSYYINSQKITCLILFSVLFLSVSAVLVSLDDDSNSPSGDSKWSYLIGCLCTVFASLIYSLQLSLMQFSFENVLKSETFSMVLEMQIYTSLVASCVAVIGLFASGEWMLLSVEMEEFHEGQVIYVLTLVGTAVSWQLGSVGAVALIFLVSSLFSNLIGTLSLIVTPLAAIAVFHDKLTEVKMVAMLIAFMGFGFYIYQNYLDDLKVQRAREAQAE 361

[Close]

BLAST of g.arboreum_cottongen_reftransV1_0006205 vs. ExPASy Swiss-Prot
Match: PUP9_ARATH (Probable purine permease 9 OS=Arabidopsis thaliana GN=PUP9 PE=2 SV=2)

HSP 1 Score: 214.542 bits (545), Expect = 5.785e-65
Identity = 126/223 (56.50%), Postives = 170/223 (76.23%), Query Frame = -2

Query:  151 LAFNAVFSYLLNSQKLTXXXXXXXXXXXXXXXXXXXNEDSDGPSGVSKGKYLVGFICTXXXXXXXXXXXXXXXXSFQKVLRKETYNVVLEMQIYTSLVATCVSTAGLFGSGEWKGLQDEMKGFKSGRVSYVLTLVWAAVSWQVCAVGVVGLIFAVSSLFSNVISTLSLAITPLAALLVFHDEMNGVKVIAMLLALCGFCSYIYQNYLDDTKARKSESQSHTDD 819
            LAF A FSYLLNSQKLT +ILNS+ +L++S+ L+A N +      V+KG+Y+ GF+CT+GASA + LLLSL QL+F+KVL+K+T++ V+ M IY SLVA+CVS  GLF S EWK L  EM+ +K G+VSYV+ LVW AV+WQV ++G  GLIF +SSLFSN IS L L + P+ A+++FHD+MNG+KVI+M+LA+ GF SY+YQ YLD+T  +KS     T+ 
Sbjct:  154 LAFTAFFSYLLNSQKLTPIILNSLFLLTISSTLLAFNNEESDSKKVTKGEYVKGFVCTVGASAGFGLLLSLQQLAFRKVLKKQTFSEVINMIIYMSLVASCVSVVGLFASSEWKTLSSEMENYKLGKVSYVMNLVWTAVTWQVFSIGCTGLIFELSSLFSNAISALGLPVVPILAVIIFHDKMNGLKVISMILAIWGFVSYVYQQYLDETNLKKSNEIPTTES 376

[Close]

BLAST of g.arboreum_cottongen_reftransV1_0006205 vs. ExPASy Swiss-Prot
Match: PUP10_ARATH (Probable purine permease 10 OS=Arabidopsis thaliana GN=PUP10 PE=2 SV=2)

HSP 1 Score: 213.001 bits (541), Expect = 2.237e-64
Identity = 123/222 (55.41%), Postives = 168/222 (75.68%), Query Frame = -2

Query:  154 LAFNAVFSYLLNSQKLTXXXXXXXXXXXXXXXXXXXNEDSDGPSGVSKGKYLVGFICTXXXXXXXXXXXXXXXXSFQKVLRKETYNVVLEMQIYTSLVATCVSTAGLFGSGEWKGLQDEMKGFKSGRVSYVLTLVWAAVSWQVCAVGVVGLIFAVSSLFSNVISTLSLAITPLAALLVFHDEMNGVKVIAMLLALCGFCSYIYQNYLDDTKARKSESQSHTD 819
            LAFNA FSY LNSQKLT +ILNS+ +L++S+ L+A N +    + V+KG+Y+ GFICT+ ASA Y L+LSL QL+F KVL+K+ ++ V++M IY SLVA+CVS  GLF S EWK L  EM  +K G+VSY++ LVW AV+WQV ++G  GLIF +SSLFSN IS L L + P+ A+++FHD+MNG+KVI+M+LA+ GF SY+YQ YLDD   +K+   + T+
Sbjct:  154 LAFNAFFSYFLNSQKLTPIILNSLFLLTISSTLLAFNNEETDSTKVTKGEYVKGFICTVAASAGYGLVLSLQQLAFLKVLKKQNFSEVMDMIIYVSLVASCVSVVGLFASSEWKTLSSEMDNYKHGKVSYIMNLVWTAVTWQVFSIGGTGLIFELSSLFSNAISVLGLPVVPILAVIIFHDKMNGLKVISMILAIWGFTSYVYQQYLDDKNLKKNHEITTTE 375

[Close]

BLAST of g.arboreum_cottongen_reftransV1_0006205 vs. ExPASy Swiss-Prot
Match: PUP12_ARATH (Putative purine permease 12 OS=Arabidopsis thaliana GN=PUP12 PE=3 SV=1)

HSP 1 Score: 209.534 bits (532), Expect = 1.935e-63
Identity = 135/221 (61.09%), Postives = 168/221 (76.02%), Query Frame = -2

Query:  160 LAFNAVFSYLLNSQKLTXXXXXXXXXXXXXXXXXXXNEDSDGPSGVSKGKYLVGFICTXXXXXXXXXXXXXXXXSFQKVLRKETYNVVLEMQIYTSLVATCVSTAGLFGSGEWKGLQDEMKGFKSGRVSYVLTLVWAAVSWQVCAVGVVGLIFAVSSLFSNVISTLSLAITPLAALLVFHDEMNGVKVIAMLLALCGFCSYIYQNYLDDTKA-RKSESQSH 819
            LAFN VF Y +NSQK+T LI  SV+ LS+SA L+++++DS+ PSG SK  YL+G  C + AS +YSL LSLMQ SF+KVL+ ET ++VLEMQIYTSLVA+CV+  GLF SGEW  L  EM+ F+ G+V YVLTLV AAVS Q+  VG V LIF VSSLFSN+ISTLSL +TPLAA+ VFHD++  VK++AM +A  GF  YIYQNYLDD K  R  E+Q+ 
Sbjct:  138 LAFNGVFYYYINSQKITCLIFFSVLFLSISAVLVSLDDDSNSPSGDSKWSYLIGCFCAVFASLIYSLQLSLMQFSFEKVLKSETLSMVLEMQIYTSLVASCVAVIGLFASGEWMLLSVEMEEFQEGQVIYVLTLVGAAVSCQLGCVGAVSLIFLVSSLFSNLISTLSLIVTPLAAIAVFHDKLTEVKMVAMPIAFTGFTFYIYQNYLDDLKVQRAREAQAE 358

[Close]

BLAST of g.arboreum_cottongen_reftransV1_0006205 vs. ExPASy Swiss-Prot
Match: PUP7_ARATH (Probable purine permease 7 OS=Arabidopsis thaliana GN=PUP7 PE=2 SV=1)

HSP 1 Score: 197.208 bits (500), Expect = 2.389e-58
Identity = 120/231 (51.95%), Postives = 170/231 (73.59%), Query Frame = -2

Query:  133 LAFNAVFSYLLNSQKLTXXXXXXXXXXXXXXXXXXXNEDSDGPSGVSKGKYLVGFICTXXXXXXXXXXXXXXXXSFQKVLRKETYNVVLEMQIYTSLVATCVSTAGLFGSGEWKGLQDEMKGFKSGRVSYVLTLVWAAVSWQVCAVGVVGLIFAVSSLFSNVISTLSLAITPLAALLVFHDEMNGVKVIAMLLALCGFCSYIYQNYLDDTKARKSESQSHTD--DVIQESH 819
            LAF A FSY LNSQK T LI++S+++L++S+AL+ VN DS+  + VS+ +Y++GFICT+GASA   LLLSL+Q+ F+KV  K T + V ++ IY SLVA+CV   GLF SGEW+ L  EM+ +K G+VSYVLTL  AA+SWQV  +G+VGLIF  SS+FSN I+ + L I P+AA++VFHD M+  K+ +++LA+CGF S++YQ+YLD+ K   S + +  D    ++E H
Sbjct:  154 LAFTAFFSYFLNSQKFTPLIVSSLLLLTVSSALLVVNTDSENSTNVSRVQYVIGFICTIGASAGIGLLLSLIQMLFRKVFTKHTSSAVTDLAIYQSLVASCVVLIGLFASGEWETLPSEMRNYKLGKVSYVLTLASAAISWQVYTLGLVGLIFESSSVFSNSITAVGLPIVPVAAVIVFHDRMDASKIFSIILAICGFLSFVYQHYLDEKKLNTSHTSAVGDLHLPVEEGH 384

[Close]

BLAST of g.arboreum_cottongen_reftransV1_0006205 vs. ExPASy Swiss-Prot
Match: PUP8_ARATH (Probable purine permease 8 OS=Arabidopsis thaliana GN=PUP8 PE=2 SV=1)

HSP 1 Score: 176.792 bits (447), Expect = 1.258e-50
Identity = 118/232 (50.86%), Postives = 166/232 (71.55%), Query Frame = -2

Query:  133 LAFNAVFSYLLNSQKLTXXXXXXXXXXXXXXXXXXXNEDSDGPSGVSKGKYLVGFICTXXXXXXXXXXXXXXXXSFQKVLRKETYNVVLEMQIYTSLVATCVSTAGLFGSGEWKGLQDEMKGFKSGRVSYVLTLVWAAVSWQVCAVGVVGLIFAVSSLFSNVISTLSLAITPLAALLVFHDEMNGVKVIAMLLALCGFCSYIYQNYLDDTKARKSESQSHTDDVI---QESH 819
            LAF A FSY LNSQK T  I+NS+ +L++S+AL+ VN DS+  + VS+ KY++G ICT+GASA   LLLSL+QL  +KVL+K+T++ V ++  Y SLVA+CV   GLF SGEWK L  EM+ +K G+V YV+TL   A+SWQV  +GVVGLIF  SS+FSN I+ + L I P+ A++VFHD+MN  K+ +++LA+ GF S++YQ+YLD+ K + S +    D  +   +E H
Sbjct:  157 LAFTAFFSYFLNSQKFTPFIVNSLFLLTISSALLVVNTDSENTAKVSRVKYVIGIICTIGASAGIGLLLSLVQLILRKVLKKQTFSTVTDLVAYQSLVASCVVLIGLFASGEWKTLTSEMENYKLGKVPYVMTLASIAISWQVYTIGVVGLIFESSSVFSNSITAVGLPIVPVVAVIVFHDKMNASKIFSIILAIWGFISFVYQHYLDEKKLKTSHTSPVGDPHLLPAEEGH 388

[Close]

BLAST of g.arboreum_cottongen_reftransV1_0006205 vs. ExPASy Swiss-Prot
Match: PUP21_ARATH (Probable purine permease 21 OS=Arabidopsis thaliana GN=PUP21 PE=2 SV=1)

HSP 1 Score: 176.407 bits (446), Expect = 1.478e-50
Identity = 115/223 (51.57%), Postives = 164/223 (73.54%), Query Frame = -2

Query:  151 LAFNAVFSYLLNSQKLTXXXXXXXXXXXXXXXXXXXNEDSDGPSGVSKGKYLVGFICTXXXXXXXXXXXXXXXXSFQKVLRKETYNVVLEMQIYTSLVATCVSTAGLFGSGEWKGLQDEMKGFKSGRVSYVLTLVWAAVSWQVCAVGVVGLIFAVSSLFSNVISTLSLAITPLAALLVFHDEMNGVKVIAMLLALCGFCSYIYQNYLDDTKARKSESQSHTDD 819
            LAF A FSY LNSQK T LI+NS+ +L++S+AL+ VN DS+  + VS+ +Y++GFICT+GASA   L+LSL+QL F+KV  K T + VL++  Y SLVATCV   GLF SGEW+ L  EM+ +K G+VSY+LTL  AA+ WQV  VG VGLIF  SS+FSN I+ + L I P+ A++VFHD+M+  K+ +++LA+ GF S++YQ+YLD+ K +  +++   ++
Sbjct:  151 LAFTAFFSYFLNSQKFTPLIVNSLFLLTVSSALLVVNTDSENTTNVSRVQYVIGFICTIGASAGIGLVLSLIQLLFRKVFTKHTSSAVLDLANYQSLVATCVVLIGLFASGEWRTLPSEMRNYKLGKVSYILTLASAAIFWQVYTVGCVGLIFESSSVFSNSITAVGLPIVPVVAVIVFHDKMDASKIFSIILAIWGFLSFVYQHYLDEKKLKTCQTKPVEEE 373

[Close]

BLAST of g.arboreum_cottongen_reftransV1_0006205 vs. ExPASy Swiss-Prot
Match: PUP6_ARATH (Probable purine permease 6 OS=Arabidopsis thaliana GN=PUP6 PE=3 SV=2)

HSP 1 Score: 170.629 bits (431), Expect = 2.495e-48
Identity = 113/227 (49.78%), Postives = 161/227 (70.93%), Query Frame = -2

Query:  151 LAFNAVFSYLLNSQKLTXXXXXXXXXXXXXXXXXXXNEDSDGPSGVSKGK----YLVGFICTXXXXXXXXXXXXXXXXSFQKVLRKETYNVVLEMQIYTSLVATCVSTAGLFGSGEWKGLQDEMKGFKSGRVSYVLTLVWAAVSWQVCAVGVVGLIFAVSSLFSNVISTLSLAITPLAALLVFHDEMNGVKVIAMLLALCGFCSYIYQNYLDDTKARKSESQSHTDD 819
            LAFNAVFSY LNSQK+T  ILNS+V+L++S+ L+ +  + + PS  SK      Y++G+IC +G+SA YSL+LSL   +F+K+L+K T+  +L+M  Y S+VATCV   GLFGSG WK L  EM+ F+ G+ SY+L  + + +SWQ C +G VGLI  VSSLFSNVISTL L + P+ A++ F DEM+G+K++AM LA+ GF SY YQ+Y++D K  + +    + +
Sbjct:  147 LAFNAVFSYFLNSQKITPFILNSLVLLTISSTLLVIQHEPESPSSTSKSAAKSKYVIGYICAVGSSAGYSLVLSLTDYAFEKILKKYTFKAILDMATYPSMVATCVVVVGLFGSGGWKKLSTEMEEFQLGKSSYILINIGSTISWQACLIGSVGLIIEVSSLFSNVISTLCLPVVPVLAVVFFRDEMSGIKLVAMFLAIWGFVSYGYQHYVNDRKPEEDQELPQSKE 373

[Close]

BLAST of g.arboreum_cottongen_reftransV1_0006205 vs. ExPASy Swiss-Prot
Match: PUP3_ARATH (Purine permease 3 OS=Arabidopsis thaliana GN=PUP3 PE=2 SV=1)

HSP 1 Score: 107.842 bits (268), Expect = 1.318e-25
Identity = 72/214 (33.64%), Postives = 133/214 (62.15%), Query Frame = -2

Query:  178 LAFNAVFSYLLNSQKLTXXXXXXXXXXXXXXXXXXXNEDSDGPSGVSKGKYLVGFICTXXXXXXXXXXXXXXXXSFQKVLRKETYNVVLEMQIYTSLVATCVSTAGLFGSGEWKGLQDEMKGFKSGRVSYVLTLVWAAVSWQVCAVGVVGLIFAVSSLFSNVISTLSLAITPLAALLVFHDEMNGVKVIAMLLALCGFCSYIYQNYLDDTKARK 819
            LAF A+FS+ +   K T   +N+VV+L++ AA++ ++ ++D P   +  +Y+ GF+ T+ A+ +Y+ +L L++L++QK  +  +Y +VLE Q+   L+A+ VS  G+F +G++K L  E + FK G   + +  V++A+ WQ   +G +GLIF+ SSL S ++ ++ L IT + A++ +H++    K +++ L+L GF SY Y         R+
Sbjct:  117 LAFIAIFSFFMVKHKFTPFTINAVVLLTVGAAVLGMHTETDKPVHETHKQYITGFLITVAAAVMYAFILPLVELAYQKAKQTMSYTLVLEFQLILCLLASIVSVIGMFIAGDFKALPKEAREFKLGEALFYVVAVFSAIIWQGFFLGAIGLIFSTSSLVSGIMISVLLPITEVLAVIFYHEKFQAEKGLSLALSLWGFVSYFYGEIKSGEDKRR 330

The following BLAST results are available for this feature:

BLAST of g.arboreum_cottongen_reftransV1_0006205 vs. ExPASy TrEMBL
BLAST of g.arboreum_cottongen_reftransV1_0006205 vs. ExPASy Swiss-Prot

BLAST of g.arboreum_cottongen_reftransV1_0006205 vs. ExPASy TrEMBL
Analysis Date: 2016-11-15 (Homology Analysis for Gossypium arboreum CottonGen RefTrans V1 vs TrEMBL)
Total hits: 25


Match Name	E-value	Identity	Description
A0A0D2SGF0_GOSRA	1.071e-128	99.13	Uncharacterized protein OS=Gossypium raimondii GN=...	[more]
A0A061DV33_THECC	5.340e-98	82.10	Purine permease 11 isoform 2 OS=Theobroma cacao GN...	[more]
A0A061DUU7_THECC	1.001e-97	82.10	Purine permease 11 isoform 1 OS=Theobroma cacao GN...	[more]
A0A0D2PSU4_GOSRA	1.241e-95	81.70	Uncharacterized protein OS=Gossypium raimondii GN=...	[more]
A0A0B2S886_GLYSO	2.479e-91	73.33	Putative purine permease 11 OS=Glycine soja GN=gly...	[more]
W9RFX8_9ROSA	4.470e-90	74.45	Uncharacterized protein OS=Morus notabilis GN=L484...	[more]
I1N423_SOYBN	1.112e-89	73.33	Uncharacterized protein OS=Glycine max PE=4 SV=2	[more]
K7MUJ0_SOYBN	1.720e-89	73.33	Uncharacterized protein OS=Glycine max PE=4 SV=1	[more]
W9QQS4_9ROSA	3.312e-88	74.45	Uncharacterized protein OS=Morus notabilis GN=L484...	[more]
M5WZV3_PRUPE	5.411e-88	72.89	Uncharacterized protein OS=Prunus persica GN=PRUPE...	[more]

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BLAST of g.arboreum_cottongen_reftransV1_0006205 vs. ExPASy Swiss-Prot
Analysis Date: 2016-11-15 (Homology Analysis for Gossypium arboreum CottonGen RefTrans V1 vs SwissProt)
Total hits: 22


Match Name	E-value	Identity	Description
PUP11_ARATH	1.137e-85	70.98	Probable purine permease 11 OS=Arabidopsis thalian...	[more]
PUP13_ARATH	1.055e-66	61.99	Probable purine permease 13 OS=Arabidopsis thalian...	[more]
PUP9_ARATH	5.785e-65	56.50	Probable purine permease 9 OS=Arabidopsis thaliana...	[more]
PUP10_ARATH	2.237e-64	55.41	Probable purine permease 10 OS=Arabidopsis thalian...	[more]
PUP12_ARATH	1.935e-63	61.09	Putative purine permease 12 OS=Arabidopsis thalian...	[more]
PUP7_ARATH	2.389e-58	51.95	Probable purine permease 7 OS=Arabidopsis thaliana...	[more]
PUP8_ARATH	1.258e-50	50.86	Probable purine permease 8 OS=Arabidopsis thaliana...	[more]
PUP21_ARATH	1.478e-50	51.57	Probable purine permease 21 OS=Arabidopsis thalian...	[more]
PUP6_ARATH	2.495e-48	49.78	Probable purine permease 6 OS=Arabidopsis thaliana...	[more]
PUP3_ARATH	1.318e-25	33.64	Purine permease 3 OS=Arabidopsis thaliana GN=PUP3 ...	[more]

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InterPro

Analysis Name: InterProScan analysis for Gossypium arboreum CottonGen RefTrans V1
Date Performed: 2016-11-14


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PFAM	PF16913	PUNUT	coord: 2..202 e-value: 9.2E-83 score: 278.0
None	No IPR available	PANTHER	PTHR31376:SF2	PURINE PERMEASE 11-RELATED	coord: 1..210
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 171..175
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 7..27
None	No IPR available	PHOBIUS	CYTOPLASMIC_DOMAIN	Cytoplasmic domain	coord: 195..222
None	No IPR available	PHOBIUS	CYTOPLASMIC_DOMAIN	Cytoplasmic domain	coord: 147..152
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 102..120
None	No IPR available	PHOBIUS	CYTOPLASMIC_DOMAIN	Cytoplasmic domain	coord: 64..83
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 153..170
None	No IPR available	PHOBIUS	CYTOPLASMIC_DOMAIN	Cytoplasmic domain	coord: 1..6
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 84..101
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 121..146
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 176..194
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 28..41
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 42..63
None	No IPR available	SIGNALP_GRAM_POSITIVE	SignalP-TM	SignalP-TM	coord: 1..25 score: 0.484
None	No IPR available	SIGNALP_EUK	SignalP-TM	SignalP-TM	coord: 1..23 score: 0.519
None	No IPR available	TMHMM	TMhelix		coord: 7..27
None	No IPR available	TMHMM	TMhelix		coord: 42..64
None	No IPR available	TMHMM	TMhelix		coord: 77..99
None	No IPR available	TMHMM	TMhelix		coord: 148..170
None	No IPR available	TMHMM	TMhelix		coord: 180..198
None	No IPR available	TMHMM	TMhelix		coord: 119..141
IPR030182	Purine permease, plant	PANTHER	PTHR31376	FAMILY NOT NAMED	coord: 1..210

Sequences

The following sequences are available for this feature:

contig sequence

contig sequence

>g.arboreum_cottongen_reftransV1_0006205 ID=g.arboreum_cottongen_reftransV1_0006205; Name=g.arboreum_cottongen_reftransV1_0006205; organism=Gossypium arboreum; type=contig; length=820bp
GTTTTTTATTTCCTATTCCAAGAAAAAAAAAGAAAAAGAAAAAAGGATAA
AAGACTATCCAATCCATTTTCTATGAGAGTAAATTGAATGCATTGGCACC
AAGTAAGTTAGCAAGAGGAAGAACTATACATGATGGCTCTCCTGAATAAC
ATCATCAGTATGTGATTGTGATTCCGATTTCCTTGCCTTCGTATCATCTA
GATAATTTTGATAAATATAAGAGCAAAAACCACAGAGTGCTAGAAGCATA
GCAATTACCTTCACCCCATTCATCTCGTCATGAAAAACCAGCAGAGCAGC
TAGAGGTGTAATAGCCAATGATAGAGTACTGATCACGTTGGAGAAGAGGG
ACGACACTGCAAAAATCAACCCTACCACCCCAACAGCACATACCTGCCAA
CTTACGGCCGCCCAAACCAACGTCAGCACATACGAAACTCTTCCGCTTTT
GAAACCCTTCATCTCATCCTGCAATCCTTTCCATTCCCCACTCCCAAACA
GACCCGCAGTCGAAACACATGTCGCCACAAGTGATGTATAAATTTGCATT
TCCAAAACCACATTATATGTTTCCTTTCTCAACACTTTCTGAAACGAAAG
TTGCATAAGGGAGAGTAAAAGAGAGTAAAGAGCAGAAGCCCCAAGGGTAC
AGATAAAGCCAACCAGATACTTCCCCTTGGAAACTCCTGACGGTCCATCT
GAATCTTCATTCACTGCTATCAGAGCAGCGGACAACGAGAGGATAACCAC
GGAGTTGAGGATTAAAGCAGTCAACTTCTGTGAATTAAGCAAATACGAAA
AAACTGCATTGAAAGCTAAT

Annotated Terms

The following terms have been associated with this contig:

Vocabulary: **INTERPRO**
Term	Definition
IPR030182	PUP_plant

Vocabulary: **Molecular Function**
Term	Definition
GO:0005215	transporter activity

Vocabulary: **Cellular Component**
Term	Definition
GO:0016021	integral to membrane

Search form

g.arboreum_cottongen_reftransV1_0006205, g.arboreum_cottongen_reftransV1_0006205 (contig) Gossypium arboreum

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