g.arboreum_cottongen_reftransV1_0001983, g.arboreum_cottongen_reftransV1_0001983 (contig) Gossypium arboreum
Overview
Alignments
The following features are aligned
Analyses
This contig is derived from or has results from the following analyses
Homology
BLAST of g.arboreum_cottongen_reftransV1_0001983 vs. ExPASy TrEMBL
Match: A0A0D2TEK2_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_009G059700 PE=4 SV=1) HSP 1 Score: 282.722 bits (722), Expect = 3.740e-86 Identity = 134/137 (97.81%), Postives = 135/137 (98.54%), Query Frame = 1 Query: 1 MEDSTVYIYNVRLDEVKSKLRGHSKRITGLAFSPLLNILVSSGADAQIIVWDLNNWERKNGCYLQSPAGRTPTARSDTQIQFHQDQTQLLAVNETQIAIYDMRKMECIKQLAIGEASASISHATFSCDSLLVYTGFV 411 MEDSTVYIYNVRLDEVKSKLRGHSKRITGLAFSPLLNILVSSGADAQIIVWDLNNWERKNGCYLQSPAGRTPTARSDTQIQFHQDQTQLLAVNETQ+AIYDMRKMECIKQLAIGEASASISHATFSCDS LVYT FV Sbjct: 850 MEDSTVYIYNVRLDEVKSKLRGHSKRITGLAFSPLLNILVSSGADAQIIVWDLNNWERKNGCYLQSPAGRTPTARSDTQIQFHQDQTQLLAVNETQLAIYDMRKMECIKQLAIGEASASISHATFSCDSQLVYTSFV 986
BLAST of g.arboreum_cottongen_reftransV1_0001983 vs. ExPASy TrEMBL
Match: B9HAH3_POPTR (WD-40 repeat family protein OS=Populus trichocarpa GN=POPTR_0006s27400g PE=4 SV=1) HSP 1 Score: 210.69 bits (535), Expect = 3.619e-60 Identity = 96/137 (70.07%), Postives = 113/137 (82.48%), Query Frame = 1 Query: 1 MEDSTVYIYNVRLDEVKSKLRGHSKRITGLAFSPLLNILVSSGADAQIIVWDLNNWERKNGCYLQSPAGRTPTARSDTQIQFHQDQTQLLAVNETQIAIYDMRKMECIKQLAIGEASASISHATFSCDSLLVYTGFV 411 M+DSTV+IYNVR+DEVKSKL+GHSKRITGLAFS +LN LVSSGAD+Q+IVW ++ WERK C LQ PAGRTP A SDTQ+QFHQDQ LL ++TQ+ IY+ K+EC+KQ IGE SA ISHATFSCDS LVY F+ Sbjct: 863 MDDSTVHIYNVRVDEVKSKLKGHSKRITGLAFSSVLNTLVSSGADSQVIVWSIDRWERKKNCVLQVPAGRTPAAMSDTQVQFHQDQVHLLVAHDTQLGIYETTKLECLKQWTIGEFSAPISHATFSCDSQLVYASFL 999
BLAST of g.arboreum_cottongen_reftransV1_0001983 vs. ExPASy TrEMBL
Match: B9IL09_POPTR (WD-40 repeat family protein OS=Populus trichocarpa GN=POPTR_0018s02080g PE=4 SV=2) HSP 1 Score: 204.912 bits (520), Expect = 3.478e-58 Identity = 97/137 (70.80%), Postives = 110/137 (80.29%), Query Frame = 1 Query: 1 MEDSTVYIYNVRLDEVKSKLRGHSKRITGLAFSPLLNILVSSGADAQIIVWDLNNWERKNGCYLQSPAGRTPTARSDTQIQFHQDQTQLLAVNETQIAIYDMRKMECIKQLAIGEASASISHATFSCDSLLVYTGFV 411 M+DST++IYNVR+DEVKSKL GHSKRI GLAFS +LN LVSSGADAQ+IVW + WERK C LQ PAGRTP A S TQ+QFHQDQ LL V+ET +AIY+ K+EC+KQ IGE SA ISHATFSCDS LVY FV Sbjct: 880 MDDSTIHIYNVRVDEVKSKLMGHSKRIAGLAFSNVLNTLVSSGADAQVIVWSTDRWERKKNCVLQIPAGRTPPAMSGTQVQFHQDQIHLLVVHETLLAIYETTKLECLKQWNIGEFSAPISHATFSCDSQLVYASFV 1016
BLAST of g.arboreum_cottongen_reftransV1_0001983 vs. ExPASy TrEMBL
Match: B9N190_POPTR (WD-40 repeat family protein OS=Populus trichocarpa GN=POPTR_0001s20770g PE=4 SV=1) HSP 1 Score: 199.904 bits (507), Expect = 2.941e-56 Identity = 91/137 (66.42%), Postives = 114/137 (83.21%), Query Frame = 1 Query: 1 MEDSTVYIYNVRLDEVKSKLRGHSKRITGLAFSPLLNILVSSGADAQIIVWDLNNWERKNGCYLQSPAGRTPTARSDTQIQFHQDQTQLLAVNETQIAIYDMRKMECIKQLAIGEASASISHATFSCDSLLVYTGFV 411 M+DST+ IYNVR+DEVKSKL+GHSKRITGLAFS +LN+LVSSGADAQ+ VW+ + WE++ +LQ PAGRTPTA+SDT++QFHQDQ L V+ETQ+AIY+ K+EC+KQ + E+SA ISHA FSCDS LVY F+ Sbjct: 919 MDDSTIQIYNVRVDEVKSKLKGHSKRITGLAFSHVLNMLVSSGADAQLCVWNSDGWEKQKARFLQVPAGRTPTAQSDTRVQFHQDQIHFLVVHETQLAIYETTKLECVKQWVLRESSAPISHAVFSCDSHLVYASFL 1055
BLAST of g.arboreum_cottongen_reftransV1_0001983 vs. ExPASy TrEMBL
Match: M0SMK9_MUSAM (Uncharacterized protein OS=Musa acuminata subsp. malaccensis PE=4 SV=1) HSP 1 Score: 198.749 bits (504), Expect = 6.723e-56 Identity = 92/137 (67.15%), Postives = 110/137 (80.29%), Query Frame = 1 Query: 1 MEDSTVYIYNVRLDEVKSKLRGHSKRITGLAFSPLLNILVSSGADAQIIVWDLNNWERKNGCYLQSPAGRTPTARSDTQIQFHQDQTQLLAVNETQIAIYDMRKMECIKQLAIGEASASISHATFSCDSLLVYTGFV 411 MEDST+ IYNVR+DEVKSKLRGHSKRITGLAFS +LN+LVSSGADAQ+ +W + WE+ +LQ P GRTP A SDT++QFHQDQ LAV+ETQIA+Y+ K+EC+KQ A E SA ISHATFSCDS L+Y F+ Sbjct: 916 MEDSTIQIYNVRVDEVKSKLRGHSKRITGLAFSNVLNVLVSSGADAQLCLWGTDGWEKHRSRFLQIPPGRTPAAISDTRVQFHQDQIHFLAVHETQIALYETTKLECVKQWAPREGSAPISHATFSCDSQLIYASFL 1052
BLAST of g.arboreum_cottongen_reftransV1_0001983 vs. ExPASy TrEMBL
Match: D7TZB7_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_09s0002g08370 PE=4 SV=1) HSP 1 Score: 197.593 bits (501), Expect = 1.635e-55 Identity = 91/137 (66.42%), Postives = 113/137 (82.48%), Query Frame = 1 Query: 1 MEDSTVYIYNVRLDEVKSKLRGHSKRITGLAFSPLLNILVSSGADAQIIVWDLNNWERKNGCYLQSPAGRTPTARSDTQIQFHQDQTQLLAVNETQIAIYDMRKMECIKQLAIGEASASISHATFSCDSLLVYTGFV 411 M+DST+ IYNVR+DEVKSKL+GHSKRITGLAFS +LN+LVSSGADAQ+ VW + WE++ +LQ PAGRT T +SDT++QFHQDQT L V+ETQ+AIY+ K++C+KQ EA+A ISHATFSCDSLLVY F+ Sbjct: 903 MDDSTIQIYNVRVDEVKSKLKGHSKRITGLAFSHVLNVLVSSGADAQLCVWSSDGWEKQKSRFLQVPAGRTSTGQSDTRVQFHQDQTHFLVVHETQLAIYEATKLDCVKQWVQREAAAPISHATFSCDSLLVYASFL 1039
BLAST of g.arboreum_cottongen_reftransV1_0001983 vs. ExPASy TrEMBL
Match: A0A067EEH6_CITSI (Uncharacterized protein (Fragment) OS=Citrus sinensis GN=CISIN_1g0012242mg PE=4 SV=1) HSP 1 Score: 191.815 bits (486), Expect = 2.078e-55 Identity = 87/137 (63.50%), Postives = 111/137 (81.02%), Query Frame = 1 Query: 1 MEDSTVYIYNVRLDEVKSKLRGHSKRITGLAFSPLLNILVSSGADAQIIVWDLNNWERKNGCYLQSPAGRTPTARSDTQIQFHQDQTQLLAVNETQIAIYDMRKMECIKQLAIGEASASISHATFSCDSLLVYTGFV 411 M+DS++ IYNVR+DEVKSKL+GHSKRITGLAFS LN+LVSSGAD+Q+ VW + WE++ +LQ P GRTPTA+SDT++QFHQDQ L V+ETQ+AI++ K+EC+KQ E+SA I+HATFSCDS LVY F+ Sbjct: 280 MDDSSIQIYNVRVDEVKSKLKGHSKRITGLAFSHALNVLVSSGADSQLCVWSSDGWEKQKNRFLQIPTGRTPTAQSDTRVQFHQDQIHFLVVHETQLAIFETTKLECVKQWVPRESSAPITHATFSCDSQLVYACFL 416
BLAST of g.arboreum_cottongen_reftransV1_0001983 vs. ExPASy TrEMBL
Match: U5GP80_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0003s02410g PE=4 SV=1) HSP 1 Score: 189.504 bits (480), Expect = 2.376e-55 Identity = 87/137 (63.50%), Postives = 111/137 (81.02%), Query Frame = 1 Query: 1 MEDSTVYIYNVRLDEVKSKLRGHSKRITGLAFSPLLNILVSSGADAQIIVWDLNNWERKNGCYLQSPAGRTPTARSDTQIQFHQDQTQLLAVNETQIAIYDMRKMECIKQLAIGEASASISHATFSCDSLLVYTGFV 411 M+DST+ IYNVR+DEVKSKL+GHSKRITGLAFS +L++LVSSGADAQ+ VW+ + WE++ +LQ P GRT TA+SDT++QFHQDQ L V+ETQ+AI++ K+EC+KQ E+SA ISHA FSCDS LVY F+ Sbjct: 171 MDDSTIQIYNVRVDEVKSKLKGHSKRITGLAFSHVLSVLVSSGADAQLCVWNSDGWEKQKTRFLQVPTGRTTTAQSDTRVQFHQDQIHFLVVHETQLAIFETTKLECVKQWLPRESSAPISHAVFSCDSQLVYASFL 307
BLAST of g.arboreum_cottongen_reftransV1_0001983 vs. ExPASy TrEMBL
Match: A0A067EAS9_CITSI (Uncharacterized protein (Fragment) OS=Citrus sinensis GN=CISIN_1g0012242mg PE=4 SV=1) HSP 1 Score: 192.2 bits (487), Expect = 3.417e-55 Identity = 87/137 (63.50%), Postives = 111/137 (81.02%), Query Frame = 1 Query: 1 MEDSTVYIYNVRLDEVKSKLRGHSKRITGLAFSPLLNILVSSGADAQIIVWDLNNWERKNGCYLQSPAGRTPTARSDTQIQFHQDQTQLLAVNETQIAIYDMRKMECIKQLAIGEASASISHATFSCDSLLVYTGFV 411 M+DS++ IYNVR+DEVKSKL+GHSKRITGLAFS LN+LVSSGAD+Q+ VW + WE++ +LQ P GRTPTA+SDT++QFHQDQ L V+ETQ+AI++ K+EC+KQ E+SA I+HATFSCDS LVY F+ Sbjct: 312 MDDSSIQIYNVRVDEVKSKLKGHSKRITGLAFSHALNVLVSSGADSQLCVWSSDGWEKQKNRFLQIPTGRTPTAQSDTRVQFHQDQIHFLVVHETQLAIFETTKLECVKQWVPRESSAPITHATFSCDSQLVYACFL 448
BLAST of g.arboreum_cottongen_reftransV1_0001983 vs. ExPASy TrEMBL
Match: W9RBZ1_9ROSA (Protein TOPLESS OS=Morus notabilis GN=L484_025714 PE=4 SV=1) HSP 1 Score: 196.823 bits (499), Expect = 3.487e-55 Identity = 90/137 (65.69%), Postives = 114/137 (83.21%), Query Frame = 1 Query: 1 MEDSTVYIYNVRLDEVKSKLRGHSKRITGLAFSPLLNILVSSGADAQIIVWDLNNWERKNGCYLQSPAGRTPTARSDTQIQFHQDQTQLLAVNETQIAIYDMRKMECIKQLAIGEASASISHATFSCDSLLVYTGFV 411 M+DST+ IYNVR+DEVKSKL+GHSKRITGLAFS +LN+LVSSGADAQI VW + WE++ +LQ P+GRTP+++SDT++QFHQDQ L V+ETQ+AIY+ K+EC+KQ E++ASISHATFSCDS LVY F+ Sbjct: 905 MDDSTIQIYNVRVDEVKSKLKGHSKRITGLAFSHVLNVLVSSGADAQICVWSSDGWEKQRNRFLQIPSGRTPSSQSDTRVQFHQDQIHFLVVHETQLAIYEATKLECVKQWIPRESAASISHATFSCDSQLVYASFL 1041
BLAST of g.arboreum_cottongen_reftransV1_0001983 vs. ExPASy Swiss-Prot
Match: TPR1_ARATH (Topless-related protein 1 OS=Arabidopsis thaliana GN=TPR1 PE=1 SV=3) HSP 1 Score: 189.889 bits (481), Expect = 1.215e-54 Identity = 85/137 (62.04%), Postives = 112/137 (81.75%), Query Frame = 1 Query: 1 MEDSTVYIYNVRLDEVKSKLRGHSKRITGLAFSPLLNILVSSGADAQIIVWDLNNWERKNGCYLQSPAGRTPTARSDTQIQFHQDQTQLLAVNETQIAIYDMRKMECIKQLAIGEASASISHATFSCDSLLVYTGFV 411 M+DST+ IYNVR+DEVKSKL+GHSKRITGLAFS +LN+LVSSGADAQ+ VW+ + WE++ LQ P GR+ ++ SDT++QFHQDQ L V+ETQ+AIY+ K+EC+KQ + E++A I+HATFSCDS L+YT F+ Sbjct: 885 MDDSTIQIYNVRVDEVKSKLKGHSKRITGLAFSNVLNVLVSSGADAQLCVWNTDGWEKQKSKVLQIPQGRSTSSLSDTRVQFHQDQVHFLVVHETQLAIYETTKLECMKQWPVRESAAPITHATFSCDSQLIYTSFM 1021
BLAST of g.arboreum_cottongen_reftransV1_0001983 vs. ExPASy Swiss-Prot
Match: TPL_ARATH (Protein TOPLESS OS=Arabidopsis thaliana GN=TPL PE=1 SV=1) HSP 1 Score: 186.808 bits (473), Expect = 1.240e-53 Identity = 86/137 (62.77%), Postives = 109/137 (79.56%), Query Frame = 1 Query: 1 MEDSTVYIYNVRLDEVKSKLRGHSKRITGLAFSPLLNILVSSGADAQIIVWDLNNWERKNGCYLQSPAGRTPTARSDTQIQFHQDQTQLLAVNETQIAIYDMRKMECIKQLAIGEASASISHATFSCDSLLVYTGFV 411 M+DST+ IYNVR+DEVKSKL+GHSKRITGLAFS +LN+LVSSGADAQ+ VW+ + WE++ L P GR +A SDT++QFHQDQ L V+ETQ+AIY+ K+EC+KQ A+ E+ A I+HATFSCDS LVY F+ Sbjct: 896 MDDSTIQIYNVRVDEVKSKLKGHSKRITGLAFSNVLNVLVSSGADAQLCVWNTDGWEKQRSKVLPLPQGRPNSAPSDTRVQFHQDQAHFLVVHETQLAIYETTKLECMKQWAVRESLAPITHATFSCDSQLVYASFM 1032
BLAST of g.arboreum_cottongen_reftransV1_0001983 vs. ExPASy Swiss-Prot
Match: TPR3_ARATH (Topless-related protein 3 OS=Arabidopsis thaliana GN=TPR3 PE=1 SV=1) HSP 1 Score: 168.318 bits (425), Expect = 4.154e-47 Identity = 80/137 (58.39%), Postives = 105/137 (76.64%), Query Frame = 1 Query: 1 MEDSTVYIYNVRLDEVKSKLRGHSKRITGLAFSPLLNILVSSGADAQIIVWDLNNWERKNGCYLQSPAGRTPTARSDTQIQFHQDQTQLLAVNETQIAIYDMRKMECIKQLAIGEA-SASISHATFSCDSLLVYTGF 408 MEDST++IYNVR+DEVKSKL+GH KRITGLAFS LNILVSSGADAQI W ++ WE++ +Q PAG+ A DT++QFH DQ ++L V+ETQ+A++D KMECI+Q ++ SA IS A ++C+S L+YT F Sbjct: 881 MEDSTIHIYNVRVDEVKSKLKGHQKRITGLAFSTALNILVSSGADAQICFWSIDTWEKRKSVAIQMPAGK--AANGDTRVQFHVDQLRILVVHETQLAVFDASKMECIRQWIPQDSLSAPISSAVYACNSQLIYTTF 1015
BLAST of g.arboreum_cottongen_reftransV1_0001983 vs. ExPASy Swiss-Prot
Match: TPR2_ARATH (Topless-related protein 2 OS=Arabidopsis thaliana GN=TPR2 PE=1 SV=2) HSP 1 Score: 165.236 bits (417), Expect = 4.694e-46 Identity = 79/137 (57.66%), Postives = 101/137 (73.72%), Query Frame = 1 Query: 1 MEDSTVYIYNVRLDEVKSKLRGHSKRITGLAFSPLLNILVSSGADAQIIVWDLNNWERKNGCYLQSPAGRTPTARSDTQIQFHQDQTQLLAVNETQIAIYDMRKMECIKQLAIGEA-SASISHATFSCDSLLVYTGF 408 MEDS+++IYNVR+DEVK+KL+GH K ITGLAFS LNILVSSGADAQ+ W ++WE+K +Q P G+ P DT++QFH DQ QLL +ETQ+AIYD KMECI + EA S+ I+ A++SC+S LVY F Sbjct: 892 MEDSSIHIYNVRVDEVKTKLKGHQKHITGLAFSTALNILVSSGADAQLFFWTADSWEKKKSSAIQLPPGKAPVG--DTRVQFHNDQIQLLVSHETQLAIYDASKMECIHKWVPQEALSSPITSASYSCNSQLVYASF 1026
BLAST of g.arboreum_cottongen_reftransV1_0001983 vs. ExPASy Swiss-Prot
Match: TPR4_ARATH (Topless-related protein 4 OS=Arabidopsis thaliana GN=TPR4 PE=1 SV=2) HSP 1 Score: 159.458 bits (402), Expect = 5.435e-44 Identity = 70/136 (51.47%), Postives = 102/136 (75.00%), Query Frame = 1 Query: 1 MEDSTVYIYNVRLDEVKSKLRGHSKRITGLAFSPLLNILVSSGADAQIIVWDLNNWERKNGCYLQSPAGRTPTARSDTQIQFHQDQTQLLAVNETQIAIYDMRKMECIKQLAIGEASASISHATFSCDSLLVYTGF 408 M+DS++ IYNVR+DEVKSKL+GH KR+TGLAFS +LN+LVSSGAD+Q+ VW ++ WE++ +Q P+G +P + T++QFHQDQ +L V+ +Q+AIY+ K+E +KQ E+S S++ A +SCDS +Y F Sbjct: 906 MDDSSIQIYNVRVDEVKSKLKGHQKRVTGLAFSNVLNVLVSSGADSQLCVWSMDGWEKQASKQIQIPSGHSPNPLAHTRVQFHQDQIHVLVVHASQLAIYEAPKLENMKQWIPKESSGSVTDAVYSCDSQSIYAAF 1041
BLAST of g.arboreum_cottongen_reftransV1_0001983 vs. ExPASy Swiss-Prot
Match: GBLP_LEIIN (Guanine nucleotide-binding protein subunit beta-like protein OS=Leishmania infantum GN=LACK1 PE=2 SV=1) HSP 1 Score: 53.5286 bits (127), Expect = 6.841e-8 Identity = 36/135 (26.67%), Postives = 65/135 (48.15%), Query Frame = 1 Query: 7 DSTVYIYNVRLDEVKSKLRGHSKRITGLAFSPLLNILVSSGADAQIIVWDLNNWERKNGCYLQSPAGRTPTARSDTQIQFHQDQTQLLAVNETQIAIYDMRKMECIKQLAIGEASAS--ISHATFSCDSLLVYTG 405 D+T+ ++NV + + L+GHS ++ + SP ++ S G D ++WDL+ E+ ++SP QI F ++ + E +++YD+ I +L A S IS A +S D +Y+G Sbjct: 173 DNTIKVWNVNGGKCERTLKGHSNYVSTVTVSPDGSLCASGGKDGAALLWDLSTGEQLFKINVESPI---------NQIAFSPNRFWMCVATERSLSVYDLESKAVIAELTPDGAKPSECISIA-WSADGNTLYSG 297
BLAST of g.arboreum_cottongen_reftransV1_0001983 vs. ExPASy Swiss-Prot
Match: GBLP_LEICH (Guanine nucleotide-binding protein subunit beta-like protein OS=Leishmania chagasi PE=2 SV=1) HSP 1 Score: 53.5286 bits (127), Expect = 6.841e-8 Identity = 36/135 (26.67%), Postives = 65/135 (48.15%), Query Frame = 1 Query: 7 DSTVYIYNVRLDEVKSKLRGHSKRITGLAFSPLLNILVSSGADAQIIVWDLNNWERKNGCYLQSPAGRTPTARSDTQIQFHQDQTQLLAVNETQIAIYDMRKMECIKQLAIGEASAS--ISHATFSCDSLLVYTG 405 D+T+ ++NV + + L+GHS ++ + SP ++ S G D ++WDL+ E+ ++SP QI F ++ + E +++YD+ I +L A S IS A +S D +Y+G Sbjct: 173 DNTIKVWNVNGGKCERTLKGHSNYVSTVTVSPDGSLCASGGKDGAALLWDLSTGEQLFKINVESPI---------NQIAFSPNRFWMCVATERSLSVYDLESKAVIAELTPDGAKPSECISIA-WSADGNTLYSG 297
BLAST of g.arboreum_cottongen_reftransV1_0001983 vs. ExPASy Swiss-Prot
Match: GBLP_LEIMA (Guanine nucleotide-binding protein subunit beta-like protein OS=Leishmania major PE=2 SV=1) HSP 1 Score: 53.5286 bits (127), Expect = 7.731e-8 Identity = 36/135 (26.67%), Postives = 65/135 (48.15%), Query Frame = 1 Query: 7 DSTVYIYNVRLDEVKSKLRGHSKRITGLAFSPLLNILVSSGADAQIIVWDLNNWERKNGCYLQSPAGRTPTARSDTQIQFHQDQTQLLAVNETQIAIYDMRKMECIKQLAIGEASAS--ISHATFSCDSLLVYTG 405 D+T+ ++NV + + L+GHS ++ + SP ++ S G D ++WDL+ E+ ++SP QI F ++ + E +++YD+ I +L A S IS A +S D +Y+G Sbjct: 173 DNTIKVWNVNGGKCERTLKGHSNYVSTVTVSPDGSLCASGGKDGAALLWDLSTGEQLFKINVESPI---------NQIGFSPNRFWMCVATERSLSVYDLESKAVIAELTPDGAKPSECISIA-WSADGNTLYSG 297
BLAST of g.arboreum_cottongen_reftransV1_0001983 vs. ExPASy Swiss-Prot
Match: WDR5_DICDI (WD repeat-containing protein 5 homolog OS=Dictyostelium discoideum GN=wdr5 PE=3 SV=1) HSP 1 Score: 51.2174 bits (121), Expect = 4.209e-7 Identity = 33/135 (24.44%), Postives = 66/135 (48.89%), Query Frame = 1 Query: 4 EDSTVYIYNVRLDEVKSKLRGHSKRITGLAFSPLLNILVSSGADAQIIVWDLNNWERKNGCYLQSPAGRTPTARSDTQIQFHQDQTQLLAVN-ETQIAIYDMRKMECIKQLAIGEASASISHATFSCDSLLVYTG 405 +D T+ I++V ++ L+GH + + G++F+P N++VS D + +WD+N E C A P T + F++D T +++ + + + I+D + + ++ E +S FS + V G Sbjct: 108 DDKTIKIWDVESGKMVKTLKGHKEYVFGVSFNPQSNLIVSGSFDENVRIWDVNTGE----CTKMISAHSDPV----TGVHFNRDGTLVVSGSYDGTVRIWDTTTGQLLNTIST-EDGKEVSFVKFSPNGKFVLAG 233 The following BLAST results are available for this feature:
BLAST of g.arboreum_cottongen_reftransV1_0001983 vs. ExPASy TrEMBL
Analysis Date: 2016-11-15 (Homology Analysis for Gossypium arboreum CottonGen RefTrans V1 vs TrEMBL) Total hits: 25
Pagesback to top
BLAST of g.arboreum_cottongen_reftransV1_0001983 vs. ExPASy Swiss-Prot
Analysis Date: 2016-11-15 (Homology Analysis for Gossypium arboreum CottonGen RefTrans V1 vs SwissProt) Total hits: 9
InterPro
Analysis Name: InterProScan analysis for Gossypium arboreum CottonGen RefTrans V1
Date Performed: 2016-11-14
Sequences
The
following sequences are available for this feature:
contig sequence >g.arboreum_cottongen_reftransV1_0001983 ID=g.arboreum_cottongen_reftransV1_0001983; Name=g.arboreum_cottongen_reftransV1_0001983; organism=Gossypium arboreum; type=contig; length=411bpback to top Annotated Terms
The
following terms have been associated with
this contig:
|