g.arboreum_cottongen_reftransV1_0006460, g.arboreum_cottongen_reftransV1_0006460 (contig) Gossypium arboreum

Overview
Nameg.arboreum_cottongen_reftransV1_0006460
Unique Nameg.arboreum_cottongen_reftransV1_0006460
Typecontig
OrganismGossypium arboreum (Tree cotton)
Sequence length1559
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Chr4chromosomeg.arboreum_cottongen_reftransV1_0006460:1..1559 .
Chr4:127331594..127334683 +
Homology
BLAST of g.arboreum_cottongen_reftransV1_0006460 vs. ExPASy TrEMBL
Match: A0A0B0P269_GOSAR (Light-inducible CPRF2 OS=Gossypium arboreum GN=F383_23731 PE=4 SV=1)

HSP 1 Score: 660.218 bits (1702), Expect = 0.000e+0
Identity = 390/390 (100.00%), Postives = 390/390 (100.00%), Query Frame = -2
Query:  347 MDRVFSVEEIPDHFWSSSAPDDDKNKSPGSEMNRSTSEWAFQQFLRXXXXXXXXXXXXXXXXXXXXXXNNKHDNIPADVEDYQAFLKKKLNLACAAVAMSMASFAKPQDSATRADRGSQASNTPQLGSKTVSRGTGDKDDNAVAEVLSFPSGQKKFRAQVRPSTSTGSSKEQSXXXXXXXXXXXXXNMDPADVKRVRRMLXXXXXXXXXXXRKQAHLTELESQVSQLRVENADLLKSLTDISQRYNEAAVNNRILKADVETLXXXXXXXXXXXKRTTGLNPVFHALPEIPSMSSFDGCPSETSTDAAVYEEDGPKHTLYQAAANDSISTHDLRINNALADISSVENIQPVSEGSAVTGNKIGRTASLHRVASLEHLQKRIRGGVSLNGKQ 1516
            MDRVFSVEEIPDHFWSSSAPDDDKNKSPGSEMNRSTSEWAFQQFLREEVDKKGEDNEEEEAKENGCFENNKHDNIPADVEDYQAFLKKKLNLACAAVAMSMASFAKPQDSATRADRGSQASNTPQLGSKTVSRGTGDKDDNAVAEVLSFPSGQKKFRAQVRPSTSTGSSKEQSDEDEVEGENETTENMDPADVKRVRRMLSNRESARRSRRRKQAHLTELESQVSQLRVENADLLKSLTDISQRYNEAAVNNRILKADVETLKAKVKMAEEAVKRTTGLNPVFHALPEIPSMSSFDGCPSETSTDAAVYEEDGPKHTLYQAAANDSISTHDLRINNALADISSVENIQPVSEGSAVTGNKIGRTASLHRVASLEHLQKRIRGGVSLNGKQ
Sbjct:    1 MDRVFSVEEIPDHFWSSSAPDDDKNKSPGSEMNRSTSEWAFQQFLREEVDKKGEDNEEEEAKENGCFENNKHDNIPADVEDYQAFLKKKLNLACAAVAMSMASFAKPQDSATRADRGSQASNTPQLGSKTVSRGTGDKDDNAVAEVLSFPSGQKKFRAQVRPSTSTGSSKEQSDEDEVEGENETTENMDPADVKRVRRMLSNRESARRSRRRKQAHLTELESQVSQLRVENADLLKSLTDISQRYNEAAVNNRILKADVETLKAKVKMAEEAVKRTTGLNPVFHALPEIPSMSSFDGCPSETSTDAAVYEEDGPKHTLYQAAANDSISTHDLRINNALADISSVENIQPVSEGSAVTGNKIGRTASLHRVASLEHLQKRIRGGVSLNGKQ 390          
BLAST of g.arboreum_cottongen_reftransV1_0006460 vs. ExPASy TrEMBL
Match: A0A0D2PFQ0_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_007G277300 PE=4 SV=1)

HSP 1 Score: 642.499 bits (1656), Expect = 0.000e+0
Identity = 384/407 (94.35%), Postives = 388/407 (95.33%), Query Frame = -2
Query:  347 KRTKKPANHPTNHTMDRVFSVEEIPDHFWSSSAPD---DDKNKSPGSEMNRSTSEWAFQQFLRXXXXXXXXXXXXXXXXXXXXXXNNKHDNIPADVEDYQAFLKKKLNLACAAVAMSMASFAKPQDSATRADRGSQASNTPQLGSKTVSRGTGDKDDNAVAEVLSFPSGQKKFRAQVRPSTSTGSSKEQSXXXXXXXXXXXXXNMDPADVKRVRRMLXXXXXXXXXXXRKQAHLTELESQVSQLRVENADLLKSLTDISQRYNEAAVNNRILKADVETLXXXXXXXXXXXKRTTGLNPVFHALPEIPSMSSFDGCPSETSTDAAVYEEDGPKHTLYQAAANDSISTHDLRINNALADISSVENIQPVSEGSAVTGNKIGRTASLHRVASLEHLQKRIRGGVSLNGKQ 1558
            K TKKPAN PTNHTMDRVFSVEE+PDHFWSSSA D   DDKNKSP SEMNRS SEWAFQQFLREEVDKKGEDNEEEEAKENGCFENNKHDN PADVEDYQAFLKKKLNLACAAVAMSMASFAKPQDSA RAD G QASNTPQLGSKTVSRG GDKDDNAVAEV SFPSGQKK RAQVRPSTSTGSSKEQSDEDEVEGENET ENMDPADVKRVRRMLSNRESARRSRRRKQAHLTELESQVSQLRVENA+LLKSLTDISQRYNEAAVNNRILKADVETLKAKVKMA EAVKRTTGLNPVFHALPEIPSMSSFDGCPS+TSTDAAVYEEDGPKHTLYQAAANDSISTH+LRINNALADISSVENIQPVSEGSAVTGNKIGRTASL RVASLEHLQKRI GGVSLNGKQ
Sbjct:    3 KTTKKPANDPTNHTMDRVFSVEEVPDHFWSSSAADGGDDDKNKSPSSEMNRSASEWAFQQFLREEVDKKGEDNEEEEAKENGCFENNKHDNSPADVEDYQAFLKKKLNLACAAVAMSMASFAKPQDSAARADSGPQASNTPQLGSKTVSRGAGDKDDNAVAEVPSFPSGQKKLRAQVRPSTSTGSSKEQSDEDEVEGENETMENMDPADVKRVRRMLSNRESARRSRRRKQAHLTELESQVSQLRVENANLLKSLTDISQRYNEAAVNNRILKADVETLKAKVKMAVEAVKRTTGLNPVFHALPEIPSMSSFDGCPSDTSTDAAVYEEDGPKHTLYQAAANDSISTHELRINNALADISSVENIQPVSEGSAVTGNKIGRTASLQRVASLEHLQKRIHGGVSLNGKQ 409          
BLAST of g.arboreum_cottongen_reftransV1_0006460 vs. ExPASy TrEMBL
Match: A0A0D2R0F6_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_007G277300 PE=4 SV=1)

HSP 1 Score: 570.466 bits (1469), Expect = 0.000e+0
Identity = 331/393 (84.22%), Postives = 337/393 (85.75%), Query Frame = -2
Query:  347 MDRVFSVEEIPDHFWSSSAPD---DDKNKSPGSEMNRSTSEWAFQQFLRXXXXXXXXXXXXXXXXXXXXXXNNKHDNIPADVEDYQAFLKKKLNLACAAVAMSMASFAKPQDSATRADRGSQASNTPQLGSKTVSRGTGDKDDNAVAEVLSFPSGQKKFRAQVRPSTSTGSSKEQSXXXXXXXXXXXXXNMDPADVKRVRRMLXXXXXXXXXXXRKQAHLTELESQVSQLRVENADLLKSLTDISQRYNEAAVNNRILKADVETLXXXXXXXXXXXKRTTGLNPVFHALPEIPSMSSFDGCPSETSTDAAVYEEDGPKHTLYQAAANDSISTHDLRINNALADISSVENIQPVSEGSAVTGNKIGRTASLHRVASLEHLQKRIRGGVSLNGKQ 1516
            MDRVFSVEE+PDHFWSSSA D   DDKNKSP SEMNRS SEWAFQQFLR                                        ++KLNLACAAVAMSMASFAKPQDSA RAD G QASNTPQLGSKTVSRG GDKDDNAVAEV SFPSGQKK RAQVRPSTSTGSSKEQSDEDEVEGENET ENMDPADVKRVRRMLSNRESARRSRRRKQAHLTELESQVSQLRVENA+LLKSLTDISQRYNEAAVNNRILKADVETLKAKVKMA EAVKRTTGLNPVFHALPEIPSMSSFDGCPS+TSTDAAVYEEDGPKHTLYQAAANDSISTH+LRINNALADISSVENIQPVSEGSAVTGNKIGRTASL RVASLEHLQKRI GGVSLNGKQ
Sbjct:    1 MDRVFSVEEVPDHFWSSSAADGGDDDKNKSPSSEMNRSASEWAFQQFLR----------------------------------------EEKLNLACAAVAMSMASFAKPQDSAARADSGPQASNTPQLGSKTVSRGAGDKDDNAVAEVPSFPSGQKKLRAQVRPSTSTGSSKEQSDEDEVEGENETMENMDPADVKRVRRMLSNRESARRSRRRKQAHLTELESQVSQLRVENANLLKSLTDISQRYNEAAVNNRILKADVETLKAKVKMAVEAVKRTTGLNPVFHALPEIPSMSSFDGCPSDTSTDAAVYEEDGPKHTLYQAAANDSISTHELRINNALADISSVENIQPVSEGSAVTGNKIGRTASLQRVASLEHLQKRIHGGVSLNGKQ 353          
BLAST of g.arboreum_cottongen_reftransV1_0006460 vs. ExPASy TrEMBL
Match: A0A061F207_THECC (Light-inducible protein CPRF-2, putative OS=Theobroma cacao GN=TCM_026349 PE=4 SV=1)

HSP 1 Score: 447.588 bits (1150), Expect = 7.569e-150
Identity = 286/407 (70.27%), Postives = 316/407 (77.64%), Query Frame = -2
Query:  353 MDRVFSVEEIPDHFWSSSAPDDDKN--KSPGSEMNRSTSEWAFQQFLRXXX--------------XXXXXXXXXXXXXXXXXXXNNK-HDNIPADVEDYQAFLKKKLNLACAAVAMSMASFAKPQDSATRADRGSQASNTPQLGSKTVSRGTGDKDDNAVAEVLSFPSGQKKFRAQVRPSTSTGSSKEQSXXXXXXXXXXXXXNMDPADVKRVRRMLXXXXXXXXXXXRKQAHLTELESQVSQLRVENADLLKSLTDISQRYNEAAVNNRILKADVETLXXXXXXXXXXXKRTTGLNPVFHALPEIPSM--SSFDGCPSETSTDAAVYEEDGPKHTLYQAAANDSISTHDLRINNALADISSVENIQPVSEGSAVTGNKIGRTASLHRVASLEHLQKRIRGGVSLNG 1516
            MDRVFSVEEI DHFWSSS+     +  K PGS+MNRS SEWAFQQFLREE                ++ +  E      +     NK  +NIPAD E+YQAFLK KLNLACAAVAMS ASF K QDSA RAD GSQASN+PQLGSK  S+G G+KD NA  E+ S P+GQKK  AQVRPSTS GSS+E S+EDEVEGENET ENMDPAD KRVRRMLSNRESARRSRRRKQAHLTELE+QV QLRVENA L+K L DISQ+YNEAAV+NR+LKADVETL+AKVKMAEE VKR TGLNP+ H  PEI +M  SSFDG PS+TSTDAAV  +DGPKH LY+AAAN+ I  HDLR++NALADISS ENIQP S GS V GNKIG TASL RVASLEHLQKRIRGGVS  G
Sbjct:    1 MDRVFSVEEISDHFWSSSSAVSAADDDKKPGSKMNRSASEWAFQQFLREEADRKGEDKKEEEEEAKEELKKKENGVMTSSNGGLENKDKNNIPADSEEYQAFLKTKLNLACAAVAMSRASFLKSQDSAARADSGSQASNSPQLGSKATSKGAGNKDGNAPVEIPSLPNGQKKSVAQVRPSTS-GSSRELSEEDEVEGENETMENMDPADAKRVRRMLSNRESARRSRRRKQAHLTELETQVGQLRVENASLMKRLADISQKYNEAAVDNRVLKADVETLRAKVKMAEETVKRITGLNPLLHGSPEISTMAMSSFDGSPSDTSTDAAVPVQDGPKHPLYRAAANNPIFAHDLRVSNALADISSAENIQPNSGGSTVPGNKIGWTASLQRVASLEHLQKRIRGGVSPCG 406          
BLAST of g.arboreum_cottongen_reftransV1_0006460 vs. ExPASy TrEMBL
Match: A0A0B0NCG2_GOSAR (Light-inducible CPRF2 OS=Gossypium arboreum GN=F383_14363 PE=4 SV=1)

HSP 1 Score: 445.662 bits (1145), Expect = 4.940e-149
Identity = 291/415 (70.12%), Postives = 329/415 (79.28%), Query Frame = -2
Query:  347 MDRVFSVEEIPDHFW--------SSSAPDDDKNKSPGSEMNRSTSEWAFQQFLRXXXXXXXXXXXXXXXXXXXXX----------XNNKHDNIPADVEDYQAFLKKKLNLACAAVAMSMASFAKPQDSATRADRGSQASNTPQLGSKTVSRGTGDKDDNAVAEVLSFPSGQKKFRAQVRPSTSTGSSKEQSXXXXXXXXXXXXXNMDPADVKRVRRMLXXXXXXXXXXXRKQAHLTELESQVSQLRVENADLLKSLTDISQRYNEAAVNNRILKADVETLXXXXXXXXXXXKRTTGLNPVFHALPEIPS--MSSFDGCPSETSTDAAVYEEDGPKHTLYQAAANDSISTHDLRINNALADISSVENIQPVSEGSAVTGNKIGRTASLHRVASLEHLQKRIRGGVS-----LNGKQ 1516
            MDRVFSVEEI DHFW        ++SA  DD NKS GS+MNRS SEWAFQQF+REEVDK+GED    E                 E+N ++N+  D ++YQAFLK KLNLACAAVAMS ASF KPQDSA RAD GSQAS+TPQ GS   S+G GDKD NA +   S  +GQKK  AQVRPSTS GSS+E S++DEVEGENET ENMDPAD KRVRRMLSNRESARRSRRRKQAHLTELE+QVSQLRVENA LLK LTDISQ+YNE+AV+NR+LKADVETL+AKVKMAE++VKR TGL+PVFHA PEI +  MSSFDG PS+TST+AAV  +DGPKH LYQAAAN  ISTHDLR NNALADISSVENIQP SE S+V+GNKIGRT S+ RVASLEHLQKR+ GG+S     LNG++
Sbjct:    1 MDRVFSVEEISDHFWPSSSSSATTNSASADDDNKS-GSKMNRSASEWAFQQFIREEVDKEGEDEGVTEGDLKKKNGTPSFNNGCLESNGNNNVLVDSDEYQAFLKNKLNLACAAVAMSRASFVKPQDSAVRADSGSQASDTPQSGSIATSKGAGDKDGNAQSGFPSVVNGQKKIGAQVRPSTS-GSSREMSEDDEVEGENETMENMDPADAKRVRRMLSNRESARRSRRRKQAHLTELETQVSQLRVENATLLKRLTDISQKYNESAVDNRVLKADVETLRAKVKMAEDSVKRITGLSPVFHASPEISTAGMSSFDGSPSDTSTEAAVSVQDGPKHPLYQAAANKPISTHDLRTNNALADISSVENIQPKSEVSSVSGNKIGRTPSMQRVASLEHLQKRMCGGISSCKPQLNGEK 413          
BLAST of g.arboreum_cottongen_reftransV1_0006460 vs. ExPASy TrEMBL
Match: A0A0D2R3Q8_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_004G246700 PE=4 SV=1)

HSP 1 Score: 439.113 bits (1128), Expect = 1.597e-146
Identity = 288/415 (69.40%), Postives = 327/415 (78.80%), Query Frame = -2
Query:  347 MDRVFSVEEIPDHFW--------SSSAPDDDKNKSPGSEMNRSTSEWAFQQFLRXXXXXXXXXXXXXXXXXXXXX----------XNNKHDNIPADVEDYQAFLKKKLNLACAAVAMSMASFAKPQDSATRADRGSQASNTPQLGSKTVSRGTGDKDDNAVAEVLSFPSGQKKFRAQVRPSTSTGSSKEQSXXXXXXXXXXXXXNMDPADVKRVRRMLXXXXXXXXXXXRKQAHLTELESQVSQLRVENADLLKSLTDISQRYNEAAVNNRILKADVETLXXXXXXXXXXXKRTTGLNPVFHALPEIPS--MSSFDGCPSETSTDAAVYEEDGPKHTLYQAAANDSISTHDLRINNALADISSVENIQPVSEGSAVTGNKIGRTASLHRVASLEHLQKRIRGGVS-----LNGKQ 1516
            MDRVFSVEEI DHFW        ++SA  DD NKS GS+MNRS SEWAFQQF+REEVDK+GED    E                 E+N ++N+  D ++YQAFLK KLNLACAAVAMS ASF KPQDSA RAD GSQAS+TPQ  S   S+G GDK+ NA++   S  +GQKK  AQVRPSTS GSS+E S++DEVEGENET ENMDPAD KRVRRMLSNRESARRSRRRKQAHLTELE+QVSQLRVENA LLK LTDISQ+YNE+AV+NR+LKADVETL+AKVKMAE++VKR TGL+PVFH  PEI +  MSSFDG PS+TST+AA   +DGPKH LYQAAAN  ISTHDLR NNALADISSVENIQP SE S+V+GNKIGRT S+ RVASLEHLQKRI GG+S     LNG++
Sbjct:    1 MDRVFSVEEISDHFWPSSSSSATTNSASADDDNKS-GSKMNRSASEWAFQQFIREEVDKEGEDEGVTEGDLKKKNGTASFNNGCLESNGNNNVLVDSDEYQAFLKNKLNLACAAVAMSRASFVKPQDSAVRADSGSQASDTPQSVSIATSKGAGDKNGNALSGFPSVVNGQKKIGAQVRPSTS-GSSREMSEDDEVEGENETMENMDPADAKRVRRMLSNRESARRSRRRKQAHLTELETQVSQLRVENATLLKRLTDISQKYNESAVDNRVLKADVETLRAKVKMAEDSVKRITGLSPVFHTSPEISTAGMSSFDGSPSDTSTEAAASVQDGPKHPLYQAAANKPISTHDLRTNNALADISSVENIQPKSEVSSVSGNKIGRTPSMQRVASLEHLQKRICGGISSCKPQLNGEK 413          
BLAST of g.arboreum_cottongen_reftransV1_0006460 vs. ExPASy TrEMBL
Match: B9I5F3_POPTR (BZIP transcription factor family protein OS=Populus trichocarpa GN=POPTR_0013s03800g PE=4 SV=2)

HSP 1 Score: 350.903 bits (899), Expect = 2.295e-112
Identity = 246/411 (59.85%), Postives = 288/411 (70.07%), Query Frame = -2
Query:  323 MDRVFSVEE-IPDHFWSSSAPDDDKNKSPGSEMNRSTSEWAFQQFLRXXXXXXXXXXXXXXXXXXXXXXNNKHDNIPADVEDYQAFLKKKLNLACAAVAMSMASFAKPQDSATRADRGSQASNTPQLGSKTVSRGTG-------DKDDNAVAEVLSFPSGQKKFRAQVRPSTSTGSSKEQSXXXXXXXXXXXXXNMDPADVKRVRRMLXXXXXXXXXXXRKQAHLTELESQVSQLRVENADLLKSLTDISQRYNEAAVNNRILKADVETLXXXXXXXXXXXKRTTGLNPVFHALPEIP--SMSSFDGCPSETSTDAAVYEEDGPKHTLYQAAANDSISTHDLRI--NNALADISSVENIQP-VSEGSAVTGNKIGRTASLHRVASLEHLQKRIRGGVSLNGKQ*EQGRQAE 1516
            M+RVFSVE+ I + FWS   P  D      S+MNRS SEWAF++FL+E       +     A  +          IP + +DY AFLK KLNLACAAVA++ ASF KP DS   A+ GSQASNT QLGS   S+G G       DKD N      S PS Q+K    V+P+TS  SS+E S++DE E E E TENM PAD KRVRRMLSNRESARRSR RKQAHLTELE+QV+QLRVEN+ LLKSLTDISQ+YNE+AV+NR+LKADVETL+AKVKMAEE VKR TGLN +FHALP+I   SMSSFDG PS+T+ DAAV  +D PKH  Y+ A N+ I+THD R   NN LADISSVEN+QP     + V+GNK+GRT SL RVASLEHLQKRIRGG S  G Q   G QA+
Sbjct:    1 MERVFSVEDNITELFWSPPPPPPDD----LSKMNRSESEWAFERFLQEASACSFSNGTCATAASSFAAPAI----IPVESDDYHAFLKSKLNLACAAVALTRASFVKPLDSPAAAESGSQASNTSQLGSHAPSKGAGYDLPISQDKDANEPLGTPSLPSMQRKSAVTVKPTTSV-SSRELSEDDENEAETELTENMQPADAKRVRRMLSNRESARRSRSRKQAHLTELETQVAQLRVENSSLLKSLTDISQKYNESAVDNRVLKADVETLRAKVKMAEETVKRFTGLNTMFHALPDISTMSMSSFDGSPSDTA-DAAVPVKDDPKHHFYK-APNNPITTHDSRPRGNNVLADISSVENVQPNPVPAAGVSGNKMGRTPSLQRVASLEHLQKRIRGGASPCGPQ-SNGEQAK 399          
BLAST of g.arboreum_cottongen_reftransV1_0006460 vs. ExPASy TrEMBL
Match: F6HTR1_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_14s0030g02200 PE=4 SV=1)

HSP 1 Score: 348.591 bits (893), Expect = 4.114e-111
Identity = 241/424 (56.84%), Postives = 285/424 (67.22%), Query Frame = -2
Query:  347 MDRVFSVEEIPDHFWSSSAPDDDKNKSPGSEMNRSTSEWAFQQFLRXXXXXXXXXXXXXXXXXXX-------------------------XXXNNKHDNIPADVEDYQAFLKKKLNLACAAVAMSMASFAKPQDSATRADRGSQASNTPQLGSKTVSRGTG-------DKDDNAVAEVLSFPSGQKKFRAQVRPSTSTGSSKEQSXXXXXXXXXXXXXNMDPADVKRVRRMLXXXXXXXXXXXRKQAHLTELESQVSQLRVENADLLKSLTDISQRYNEAAVNNRILKADVETLXXXXXXXXXXXKRTTGLNPVFHALPEI--PSMSSFDGCPSETSTDAAVYEEDGPKHTLYQAAANDSISTHDLRINNALADISSVENIQPVSEGSAVTGNKIGRTASLHRVASLEHLQKRIRGGVSLNGKQ 1516
            MDRVFSV+EIP+ FW+S       +    S+MNRS SEWAFQ+FL+E        +                                      +   N+P D E+YQAFLK +LNLACAAVA+S ASF KPQDSA  AD GSQAS T QL S+   +G+G       DK+      + S P+ QKK  AQ+RP+TS  SS+E SD+DEVEGE ET ENMDPAD KRVRRMLSNRESARRSRRRKQAHLTELE+QV+QLR+EN+ LLK LTDISQ+YNEAAV+NR+LKADVETL+AKVKMAEE VKR TGLNP+F  + EI    M SFDG PS+TS DAAV  +D PK   Y + +++ ISTHD RINN LAD+SSVE++      +   GNK+GRTASL RVASLEHLQKRIRG V  NG Q
Sbjct:    1 MDRVFSVDEIPEQFWASPP----SSSKEPSQMNRSASEWAFQRFLQESSSPPSSSSVSASGPSAENDVVELKVPIDDPKPTPAPPAPPAPATSLDPPPNVPIDSEEYQAFLKSRLNLACAAVALSRASFVKPQDSAALADTGSQASKTSQLRSQAPCKGSGYDLSGAPDKEAGGPLGIPSLPAMQKKAGAQLRPTTSE-SSREHSDDDEVEGETETIENMDPADAKRVRRMLSNRESARRSRRRKQAHLTELETQVAQLRLENSSLLKRLTDISQKYNEAAVDNRVLKADVETLRAKVKMAEETVKRVTGLNPLFQTMSEISMAGMHSFDGSPSDTSADAAVPVQDEPKQHFYPSPSDNLISTHDPRINNGLADVSSVESVLQNPAAAGAAGNKMGRTASLQRVASLEHLQKRIRGAV--NGPQ 417          
BLAST of g.arboreum_cottongen_reftransV1_0006460 vs. ExPASy TrEMBL
Match: A0A072VN13_MEDTR (Transcription factor bZIP88 OS=Medicago truncatula GN=MTR_1g080920 PE=4 SV=1)

HSP 1 Score: 337.421 bits (864), Expect = 6.895e-107
Identity = 217/401 (54.11%), Postives = 271/401 (67.58%), Query Frame = -2
Query:  368 MDRVFSVEEIPDHFWSSSAPDDDKNKSPGSEMNRSTSEWAFQQFLRXXXXXXXXXXXXXXXXXXXXXXNNKHDNIP-------ADVEDYQAFLKKKLNLACAAVAMSMASFAKPQDSATRADRGSQASNTPQLGSKTVSRGTG----------DKDDNAVAEVLSFPSGQKKFRAQVRPSTSTGSSKEQSXXXXXXXXXXXXXNMDPADVKRVRRMLXXXXXXXXXXXRKQAHLTELESQVSQLRVENADLLKSLTDISQRYNEAAVNNRILKADVETLXXXXXXXXXXXKRTTGLNPVFHALPEIPSMSSFDGCPSETSTDAAVYEEDGPKHTLYQAAANDSISTHDLRINNALADISSVENIQPVSEGSAVTGNKIGRTA-SLHRVASLEHLQKRIRGG 1516
            MDRVFSV+EIPDH WS             S+M+RS SEWAFQ+FL+E        +   +              +P        D ++Y+AFLK KLNLACAAVAM+  S  K QD AT  + G Q+SN  Q+GS+ +S G+G          DKD      V S P  QKK    +RPSTS GSS+EQSD+DE EGE    ++ DP DVKRVRRMLSNRESARRSRRRKQAHLTELE+QVSQLR EN+ L+K LTD++Q+Y ++AV+NR+LKADVETL+AKVKMAEE VKR TGLNP+FH +P++ SM +FDG PS+   DAAV  +D P H  YQ  + + +  HD+R++N L +ISS+EN+QP +  + V GNK+G+TA  LHRVASLEHLQKRIRGG
Sbjct:    1 MDRVFSVDEIPDHLWSPQIHVSGSAGDESSKMSRSASEWAFQRFLQEAASPSPSSSSVADNTGFADAAAKDGAVLPNGPPPVAVDSDEYRAFLKSKLNLACAAVAMTRGSLTKSQDLATFPENGPQSSNATQVGSQPISEGSGPSGNDPPILQDKDAKVPPAVPSIPHVQKKTIVAIRPSTS-GSSREQSDDDEAEGETYMIDSTDPTDVKRVRRMLSNRESARRSRRRKQAHLTELETQVSQLRGENSTLVKRLTDVNQKYTDSAVDNRVLKADVETLRAKVKMAEETVKRVTGLNPLFHVMPDMSSMPAFDGSPSDNLADAAVPVQDDPHHHFYQPTSINPMPCHDMRVSNGLGEISSIENVQP-NNAAVVGGNKMGQTAPPLHRVASLEHLQKRIRGG 399          
BLAST of g.arboreum_cottongen_reftransV1_0006460 vs. ExPASy TrEMBL
Match: A5BP13_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_022136 PE=4 SV=1)

HSP 1 Score: 337.806 bits (865), Expect = 1.450e-106
Identity = 240/432 (55.56%), Postives = 284/432 (65.74%), Query Frame = -2
Query:  365 MDRVFSVEEIPDHFWSSSAPDDDKNKSPGSEMNRSTSEWAFQQFLRXXXXXXXXXXXXXXXXXXX----------------------XXXNNKHDNIPADVEDYQAFLKKKLNLACAAVAMS-----------------MASFAKPQDSATRADRGSQASNTPQLGSKTVSRGTG-------DKDDNAVAEVLSFPSGQKKFRAQVRPSTSTGSSKEQSXXXXXXXXXXXXXNMDPADVKRVRRMLXXXXXXXXXXXRKQAHLTELESQVSQLRVENADLLKSLTDISQRYNEAAVNNRILKADVETLXXXXXXXXXXXKRTTGLNPVFHALPEI--PSMSSFDGCPSETSTDAAVYEEDGPKHTLYQAAANDSISTHDLRINNALADISSVENIQPVSEGSAVTGNKIGRTASLHRVASLEHLQKRIRGGV 1516
            MDRVFSV+EIP+ FW+S       +K P S+MNRS SEWAFQ+FL+E        +                                   +   N+P D E+YQAFLK +LNLACAAVA+S                  ASF KPQDSA  AD GSQAS T QL S+   +G+G       DK+      + S P+ QKK  AQ+RP+TS  SS+E SD+DEVEGE ET ENMDPAD KRVRRMLSNRESARRSRRRKQAHLTELE+QV+QLR+EN+ LLK LTDISQ+YNEAAV+NR+LKADVETL+AKVKMAEE VKR TGLNP+F  + EI    M SFDG PS+TS DAAV  +D PK   Y + +++ ISTHD RINN LAD+SSVE++      +   GNK+GRTASL RVASLEHLQKRIRG V
Sbjct:    1 MDRVFSVDEIPEQFWASPP---SSSKEPSSQMNRSASEWAFQRFLQESSSPPSSSSVSASGPSAENDVVELKVPIDDPKPTPAPPAPATSLDPPPNVPIDSEEYQAFLKSRLNLACAAVALSRVTVDQLPLPLHKLQIIQASFVKPQDSAALADTGSQASKTSQLRSQAPCKGSGYDLSGAPDKEAGGPLGIPSLPAMQKKAGAQLRPTTSE-SSREHSDDDEVEGETETIENMDPADAKRVRRMLSNRESARRSRRRKQAHLTELETQVAQLRLENSSLLKRLTDISQKYNEAAVDNRVLKADVETLRAKVKMAEETVKRVTGLNPLFQTMSEISMAGMHSFDGSPSDTSADAAVPVQDEPKQHFYPSPSDNLISTHDPRINNGLADVSSVESVLQNPAAAGAAGNKMGRTASLQRVASLEHLQKRIRGAV 428          
BLAST of g.arboreum_cottongen_reftransV1_0006460 vs. ExPASy Swiss-Prot
Match: CPRF2_PETCR (Light-inducible protein CPRF2 OS=Petroselinum crispum GN=CPRF2 PE=2 SV=2)

HSP 1 Score: 313.153 bits (801), Expect = 1.507e-99
Identity = 221/408 (54.17%), Postives = 272/408 (66.67%), Query Frame = -2
Query:  347 MDRVFSVEEIPDHFWSSSAPDDDKNKSPGSEMNRSTSEWAFQQFLRXXXXXXXXXXXXXXXXXXXXXXNNKHD---NIPADVEDYQAFLKKKLNLACAAVAMSMASFAKPQDSATRADRGSQASNTPQLGSKTVSRGTG-----DKDDNAVAEVLS--FPSGQKKFRAQVRPSTSTGSSKEQSXXXXXXXXXXXXXNMDPADVKRVRRMLXXXXXXXXXXXRKQAHLTELESQVSQLRVENADLLKSLTDISQRYNEAAVNNRILKADVETLXXXXXXXXXXXKRTTGLNPVFHALP-EIPS--MSSFDGCPSETSTDAAVYEEDGPKHTLYQAAANDSISTHDLRINNALADISSVENIQPVSEGSAVTGNKIGRTASLHRVASLEHLQKRIRGGVS-----LNGKQ 1516
            MDRVFSVE+I D FWS  A +D    S    MNRS SEWAFQ FL++    +       +         N  +   N+P D EDYQA+LK +L+LACAAVA++ AS  KPQDSA   D GSQASNT QL S+   +G+G     ++D  A+A   +   P+ QKK   QV+ +TS  S     D+DE+EGE ETT N DP+D KRVRRMLSNRESARRSRRRKQAH+TELE+QVSQLRVEN+ LLK LTDISQRYN+AAV+NR+LKAD+ET++AKVKMAEE VKR TGLNP+F ++  EI +  M SF G PS+TS D     +DG K   YQ A    +   D +I N L  +  V+N+Q  S    V GNK+ RT+S+ RVASLEHLQKRIRGGVS     ++GKQ
Sbjct:    1 MDRVFSVEDISDQFWSPPARED----SSKLVMNRSDSEWAFQSFLQQASALESSQPLPSDPVPVAGDVKNPVEIPANVPVDSEDYQAYLKSRLDLACAAVALTRASSLKPQDSAALLDNGSQASNTSQLVSQVPPKGSGHDLSKEEDKEALAATATPLLPALQKKSAIQVKSTTSGSSRDHSDDDDELEGETETTRNGDPSDAKRVRRMLSNRESARRSRRRKQAHMTELETQVSQLRVENSSLLKRLTDISQRYNDAAVDNRVLKADIETMRAKVKMAEETVKRVTGLNPMFQSMSSEISTIGMQSFSGSPSDTSADTT---QDGSKQHFYQPAPTSHMPAQDQKIQNGLLQVPPVDNLQQHSASGPVEGNKMERTSSMQRVASLEHLQKRIRGGVSSCEAQVSGKQ 401          
BLAST of g.arboreum_cottongen_reftransV1_0006460 vs. ExPASy Swiss-Prot
Match: BZP63_ARATH (Basic leucine zipper 63 OS=Arabidopsis thaliana GN=BZIP63 PE=1 SV=1)

HSP 1 Score: 208.764 bits (530), Expect = 8.036e-61
Identity = 163/382 (42.67%), Postives = 216/382 (56.54%), Query Frame = -2
Query:  374 MDRVFSVEEIP-DHFWSSSAPDDDKNKSPGSEMNRSTSEWAFQQFLRXXXXXXXXXXXXXXXXXXXXXXNNKHDNIPADVEDYQAFLKKKLNLACAAVAMSMASFAKPQDSATRADRGSQASNTPQLGSKTVSRGTGDKDDNAVAEVLSFPSGQKKFRAQVRPSTSTGSSKEQSXXXXXXXXXXXXXNMDPADVKRVRRMLXXXXXXXXXXXRKQAHLTELESQVSQLRVENADLLKSLTDISQRYNEAAVNNRILKADVETLXXXXXXXXXXXKRTTGLNPVFHALPEIPSMSSFDGCPSETSTDAAVYEEDGPKHTLYQAAANDSISTHDLRINNALADISSVENIQPVSEGSAVTGNKIGRTASLHRVASLEHLQKRIR 1516
            M++VFS EEI  +H WS +           + +NRS SEWAF +F++E      +         +     N    +P D E+Y+AFLK KLNLACAAVAM   +F KPQD++ R+D G                G  + +  ++A   + P       +    S S  S  E+        E +   NM+P +VKRV+RMLSNRESARRSRRRKQAHL+ELE+QVSQLRVEN+ L+K LTD++Q +N+A+V NR+LKA++ETL+AKVKMAEE VKR TG NP+FH +P+I S  S    PSETS        + P  T  Q    + IS+ +                    +G A+ G K+ RTAS+ RV SLEHLQKRIR
Sbjct:    1 MEKVFSDEEISGNHHWSVNGM---------TSLNRSASEWAFNRFIQESSAAADDGESTTACGVSVSSPPN----VPVDSEEYRAFLKSKLNLACAAVAMKRGTFIKPQDTSGRSDNG----------------GANESEQASLASSKATP-----MMSSAITSGSELSGDEE--------EADGETNMNPTNVKRVKRMLSNRESARRSRRRKQAHLSELETQVSQLRVENSKLMKGLTDVTQTFNDASVENRVLKANIETLRAKVKMAEETVKRLTGFNPMFHNMPQIVSTVSL---PSETS--------NSPDTTSSQVTTPEIISSGN--------------------KGKALIGCKMNRTASMRRVESLEHLQKRIR 309          
BLAST of g.arboreum_cottongen_reftransV1_0006460 vs. ExPASy Swiss-Prot
Match: BZP10_ARATH (Basic leucine zipper 10 OS=Arabidopsis thaliana GN=BZIP10 PE=1 SV=2)

HSP 1 Score: 103.99 bits (258), Expect = 1.020e-22
Identity = 96/207 (46.38%), Postives = 135/207 (65.22%), Query Frame = -2
Query:  668 ADVEDYQAFLKKKLNLACAAVAMSMASFAKPQDSATRADRGSQASNTPQLGSKTVSRGTGDKDDNAVAEVLSFPSGQKKFRAQVRPSTSTGSSKEQSXXXXXXXXXXXXXNMDPADVKRVRRMLXXXXXXXXXXXRKQAHLTELESQVSQLRVENADLLKSLTDISQRYNEAAVNNRILKADVETLXXXXXXXXXXXKRTTGLNPVF 1288
             D +DY+  LK KL   CA V        KP+DS +  +   Q      + S  +++G        +    S P+  KK    ++  TS GSS+E SD+++++ ENETT ++ P DVK+ RRMLSNRESARRSRRRKQ   ++LE+QV+ L+ E++ LLK L++++ +Y+EAAV NRILKAD+ETL+AKVKMAEE VKR TG+NP+ 
Sbjct:  113 VDSDDYRRVLKNKLETECATVVSLRVGSVKPEDSTSSPETQLQP-----VQSSPLTQG-------ELGVTSSLPAEVKKTGVSMKQVTS-GSSREYSDDEDLDEENETTGSLKPEDVKKSRRMLSNRESARRSRRRKQEQTSDLETQVNDLKGEHSSLLKQLSNMNHKYDEAAVGNRILKADIETLRAKVKMAEETVKRVTGMNPML 306          
BLAST of g.arboreum_cottongen_reftransV1_0006460 vs. ExPASy Swiss-Prot
Match: BZP25_ARATH (Basic leucine zipper 25 OS=Arabidopsis thaliana GN=BZIP25 PE=1 SV=1)

HSP 1 Score: 101.679 bits (252), Expect = 5.717e-22
Identity = 101/230 (43.91%), Postives = 139/230 (60.43%), Query Frame = -2
Query:  605 ADVEDYQAFLKKKLNLACAAVAMSMASFAKPQDSATRADRGSQASNTPQLGSKTVSRGTGDKDDNAVAEVLSFPSGQKKFRAQVRPSTSTGSSKEQSXXXXXXXXXXXXXNMDPADVKRVRRMLXXXXXXXXXXXRKQAHLTELESQVSQLRVENADLLKSLTDISQRYNEAAVNNRILKADVETLXXXXXXXXXXXKRTTGLNPVFHALPE--IPSMSSFDGCPSETST 1288
             D   Y A LK KL LACAAVA  + +  KP+DS+  A    QA      GS       G       + V   P+   + +  V    ++ SS++ SD+D+++G+ +     DP DVKR RRMLSNRESARRSRRRKQ  + E ++QV QLR E++ L+  L+D++ +Y+ AAV+NRIL+AD+ETL+ KVKMAEE VKR TG+NP+  + P   IP    F   PS +S+
Sbjct:  129 VDPNQYHAILKSKLELACAAVARRVGTV-KPEDSSASASNQKQAQ-----GSIVAQTSPG------ASSVRFSPTTSTQKKPDVPARQTSISSRDDSDDDDLDGDADN---GDPTDVKRARRMLSNRESARRSRRRKQEQMNEFDTQVGQLRAEHSTLINRLSDMNHKYDAAAVDNRILRADIETLRTKVKMAEETVKRVTGVNPLHWSRPNMGIP----FSNTPSASSS 339          
BLAST of g.arboreum_cottongen_reftransV1_0006460 vs. ExPASy Swiss-Prot
Match: BZIP9_ARATH (Basic leucine zipper 9 OS=Arabidopsis thaliana GN=BZIP9 PE=1 SV=1)

HSP 1 Score: 70.4774 bits (171), Expect = 4.014e-12
Identity = 68/146 (46.58%), Postives = 92/146 (63.01%), Query Frame = -2
Query:  632 KFRAQVRPSTSTGSSKEQSXXXXXXXXXXXXXNMDPADVKRVRRMLXXXXXXXXXXXRKQAHLTELESQVSQLRVENADLLKSLTDISQRYNEAAVNNRILKADVETLXXXXXXXXXXXKR---TTGLNPVF--HALPEIPSMSSF 1054
            + R  VR +TS  S     DED      ++    DP D+KR+RRM SNRESA+RSRRRKQ +L +LE+QV  L+ +N+ L K L D +Q++  A  NNR+LK+DVETL+ KVK+AE+ V R   T+ LN +   H  P   S+SS 
Sbjct:   83 EVRGGVRRTTSGSSHVNSDDEDAETEAGQSEMTNDPNDLKRIRRMNSNRESAKRSRRRKQEYLVDLETQVDSLKGDNSTLYKQLIDATQQFRSAGTNNRVLKSDVETLRVKVKLAEDLVARGSLTSSLNQLLQTHLSPPSHSISSL 228          
BLAST of g.arboreum_cottongen_reftransV1_0006460 vs. ExPASy Swiss-Prot
Match: OP2_MAIZE (Regulatory protein opaque-2 OS=Zea mays GN=O2 PE=1 SV=1)

HSP 1 Score: 64.6994 bits (156), Expect = 7.966e-10
Identity = 42/69 (60.87%), Postives = 57/69 (82.61%), Query Frame = -2
Query:  731 KRVRRMLXXXXXXXXXXXRKQAHLTELESQVSQLRVENADLLKSLTDISQRYNEAAVNNRILKADVETL 937
            +RVR+  SNRESARRSR RK AHL ELE QV+QL+ EN+ LL+ +  ++Q+YN+A V+NR+L+AD+ETL
Sbjct:  227 ERVRKKESNRESARRSRYRKAAHLKELEDQVAQLKAENSCLLRRIAALNQKYNDANVDNRVLRADMETL 295          
The following BLAST results are available for this feature:
BLAST of g.arboreum_cottongen_reftransV1_0006460 vs. ExPASy TrEMBL
Analysis Date: 2016-11-15 (Homology Analysis for Gossypium arboreum CottonGen RefTrans V1 vs TrEMBL)
Total hits: 25
Match NameE-valueIdentityDescription
A0A0B0P269_GOSAR0.000e+0100.00Light-inducible CPRF2 OS=Gossypium arboreum GN=F38... [more]
A0A0D2PFQ0_GOSRA0.000e+094.35Uncharacterized protein OS=Gossypium raimondii GN=... [more]
A0A0D2R0F6_GOSRA0.000e+084.22Uncharacterized protein OS=Gossypium raimondii GN=... [more]
A0A061F207_THECC7.569e-15070.27Light-inducible protein CPRF-2, putative OS=Theobr... [more]
A0A0B0NCG2_GOSAR4.940e-14970.12Light-inducible CPRF2 OS=Gossypium arboreum GN=F38... [more]
A0A0D2R3Q8_GOSRA1.597e-14669.40Uncharacterized protein OS=Gossypium raimondii GN=... [more]
B9I5F3_POPTR2.295e-11259.85BZIP transcription factor family protein OS=Populu... [more]
F6HTR1_VITVI4.114e-11156.84Putative uncharacterized protein OS=Vitis vinifera... [more]
A0A072VN13_MEDTR6.895e-10754.11Transcription factor bZIP88 OS=Medicago truncatula... [more]
A5BP13_VITVI1.450e-10655.56Putative uncharacterized protein OS=Vitis vinifera... [more]

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BLAST of g.arboreum_cottongen_reftransV1_0006460 vs. ExPASy Swiss-Prot
Analysis Date: 2016-11-15 (Homology Analysis for Gossypium arboreum CottonGen RefTrans V1 vs SwissProt)
Total hits: 6
Match NameE-valueIdentityDescription
CPRF2_PETCR1.507e-9954.17Light-inducible protein CPRF2 OS=Petroselinum cris... [more]
BZP63_ARATH8.036e-6142.67Basic leucine zipper 63 OS=Arabidopsis thaliana GN... [more]
BZP10_ARATH1.020e-2246.38Basic leucine zipper 10 OS=Arabidopsis thaliana GN... [more]
BZP25_ARATH5.717e-2243.91Basic leucine zipper 25 OS=Arabidopsis thaliana GN... [more]
BZIP9_ARATH4.014e-1246.58Basic leucine zipper 9 OS=Arabidopsis thaliana GN=... [more]
OP2_MAIZE7.966e-1060.87Regulatory protein opaque-2 OS=Zea mays GN=O2 PE=1... [more]
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InterPro
Analysis Name: InterProScan analysis for Gossypium arboreum CottonGen RefTrans V1
Date Performed: 2016-11-14
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 42..62
NoneNo IPR availableCOILSCoilCoilcoord: 245..272
NoneNo IPR availableCOILSCoilCoilcoord: 203..237
NoneNo IPR availableGENE3D1.20.5.170coord: 194..246
e-value: 9.9E-12
score: 44.3
NoneNo IPR availablePANTHERPTHR22952CAMP-RESPONSE ELEMENT BINDING PROTEIN-RELATEDcoord: 33..348
NoneNo IPR availablePANTHERPTHR22952CAMP-RESPONSE ELEMENT BINDING PROTEIN-RELATEDcoord: 1..15
NoneNo IPR availablePANTHERPTHR22952:SF90BASIC LEUCINE ZIPPER 63coord: 1..15
coord: 33..348
NoneNo IPR availableSUPERFAMILY57959Leucine zipper domaincoord: 194..243
IPR004827Basic-leucine zipper domainSMARTSM00338brlzneucoord: 190..254
e-value: 1.3E-17
score: 74.6
IPR004827Basic-leucine zipper domainPFAMPF00170bZIP_1coord: 193..244
e-value: 1.4E-13
score: 50.6
IPR004827Basic-leucine zipper domainPROSITEPS00036BZIP_BASICcoord: 197..212
IPR004827Basic-leucine zipper domainPROSITEPS50217BZIPcoord: 192..247
score: 11.312
IPR020983Basic leucine-zipper, C-terminalPFAMPF12498bZIP_Ccoord: 261..384
e-value: 1.8E-34
score: 119.2

Sequences
The following sequences are available for this feature:

contig sequence

>g.arboreum_cottongen_reftransV1_0006460 ID=g.arboreum_cottongen_reftransV1_0006460; Name=g.arboreum_cottongen_reftransV1_0006460; organism=Gossypium arboreum; type=contig; length=1559bp
GTTTTTGCTTAGCAAATTAGAGCATAAAGGTTTTTGAGGTAGCACTTCAG
AGATGTAGAATTGGCTTCCTACCATATCAGTTGACAAGGATGGAACTAAA
AGGAAAGCTAACAAGACGTATAGAAAATCCCACAGCATGCTATGGAAATG
GCAGTGGTAAAATCTATCATTCCAGCAAATATGGCATGATTAAAGGAAAG
GTTTAGTCAAGCAGTAGCCATTACTACCCAAGTAACCTAAAAACTAACAT
TGTTTCCATCAGTTAAACCAGAAATCATAGCACACTTTGGTCAGTTCCAA
CACATTCTTCACTATCTTTAGACTCTGCTTGTCTGCCTTGCTCCTATTGC
TTCCCATTCAGGCTTACACCCCCACGGATCCTCTTTTGCAGATGCTCCAA
GCTAGCCACTCGATGCAAAGAAGCTGTCCGCCCAATTTTGTTTCCTGTCA
CTGCTGATCCTTCAGAAACAGGTTGTATATTTTCAACTGAAGAAATATCT
GCGAGTGCATTGTTGATTCTAAGGTCATGAGTGGATATCGAATCGTTAGC
AGCAGCCTGATAAAGGGTATGCTTTGGACCATCTTCCTCATAAACTGCAG
CATCCGTTGAAGTTTCAGAGGGACATCCATCAAATGATGACATGCTTGGT
ATCTCAGGTAATGCATGGAACACAGGGTTCAAACCAGTAGTTCTTTTGAC
TGCCTCTTCAGCCATTTTTACCTTTGCTTTCAATGTTTCAACATCAGCTT
TTAAAATTCTGTTGTTAACTGCTGCTTCATTGTACCTTTGACTAATGTCA
GTCAAACTCTTCAATAAGTCTGCATTTTCAACTCTTAATTGAGAAACCTG
TGACTCAAGTTCTGTCAAATGGGCCTGTTTTCTTCTTCTAGAACGCCTAG
CAGACTCTCGATTCGAAAGCATCCTCCTTACACGTTTTACATCAGCAGGA
TCCATGTTCTCCGTTGTTTCATTTTCACCTTCAACTTCATCCTCGTCCGA
CTGTTCTTTTGACGATCCAGTACTTGTGCTTGGCCTCACTTGAGCTCTAA
ATTTTTTCTGTCCACTGGGAAAAGAAAGAACTTCAGCCACTGCATTATCA
TCCTTGTCACCGGTTCCTCTGGAAACAGTTTTGGATCCCAATTGTGGAGT
ATTAGATGCCTGTGACCCCCTGTCGGCTCTAGTAGCAGAGTCTTGAGGTT
TTGCAAAAGAAGCCATTGACATGGCAACAGCAGCACAAGCCAAGTTAAGT
TTCTTCTTAAGAAAAGCCTGATAATCCTCTACATCTGCAGGAATATTGTC
GTGTTTATTATTTTCAAAACACCCATTCTCCTTAGCTTCCTCCTCTTCGT
TATCTTCACCTTTCTTATCAACTTCTTCTCTAAGGAACTGCTGAAAAGCC
CACTCCGAAGTACTACGGTTCATTTCAGAACCGGGGCTTTTGTTTTTATC
GTCGTCGGGGGCGGAAGAAGACCAGAAATGGTCGGGGATTTCTTCAACGG
AGAAAACTCTATCCATTGTGTGATTGGTTGGGTGGTTTGCCGGCTTTTTC
GTCCTTTTA
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Annotated Terms
The following terms have been associated with this contig:
Vocabulary: INTERPRO
TermDefinition
IPR004827bZIP
IPR020983Basic_leucine-zipper_C
Vocabulary: Molecular Function
TermDefinition
GO:0003700DNA-binding transcription factor activity
GO:0043565sequence-specific DNA binding
Vocabulary: Biological Process
TermDefinition
GO:0006355regulation of DNA-templated transcription