g.arboreum_cottongen_reftransV1_0018389, g.arboreum_cottongen_reftransV1_0018389 (contig) Gossypium arboreum
Overview
Alignments
The following features are aligned
Analyses
This contig is derived from or has results from the following analyses
Homology
BLAST of g.arboreum_cottongen_reftransV1_0018389 vs. ExPASy TrEMBL
Match: A0A0D2TBK1_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_009G015000 PE=4 SV=1) HSP 1 Score: 741.495 bits (1913), Expect = 0.000e+0 Identity = 368/385 (95.58%), Postives = 377/385 (97.92%), Query Frame = -1 Query: 1 MEDSSPKEDNPGVLKLLEALKQAIQELQAHPTHKSVQSNSSPIKALLELETESDSIISKDPLLSTLSRHLAELKILVETLERNRGYGLRSFLTRRVSTYSISRVAGSIESEIQALMDRGSIDSLINALKDPWKDEDELSRLLSQFEHRVSQGFNPELQDSVLKSKAFSVLQTVLCDPNCSKQIREKAAFCVAALIRFNKDVFVGQVNMGDTIQALLEMKSAHSVKVLCELITFIKSPFVDVILCNGELPKILTLLESKDLSMKVVVFNCILEIGYFGRKEAVEAMLNGGLIEKLVELQRSEFGGDLIGMGKYGNENEVSEGKKREKKFLENHPFASCVARFAVQLEVGEGLRKREKRAFKPEILEKVREASVNDAEAATIIAEVL 1155 MEDSSPKED+PGVLKLLEALKQA ELQAHPT+KSVQSNSSPIKALLELETESDSIISKDP LSTLSRHLAELKILVETLERNRGYGLRSFLTRRVST+SISRVAGSIESE+QALMDRGSIDSLINALKDPWKDEDEL+RLLSQFE RVSQGFNPELQDSVLKSKAFSVLQTVLCDPNCSKQIRE+AAFCVAALIRFNKDVFVGQVNMGDTIQALLEMKSAHSVK+LCELI FIKSPFVD ILCNGELPKILTLLESKDLSMKVVVF+CILEIGYFGRKEAVEAMLNGGLIEKLVELQRSEFGGDLIGMGKYGNENE SEG+KREKKFLENHPFASCVARFAVQLEVGEGLRKREKRAFK EILEKVREASVNDAEAATIIAEVL Sbjct: 1 MEDSSPKEDDPGVLKLLEALKQASHELQAHPTYKSVQSNSSPIKALLELETESDSIISKDPHLSTLSRHLAELKILVETLERNRGYGLRSFLTRRVSTHSISRVAGSIESEVQALMDRGSIDSLINALKDPWKDEDELARLLSQFEVRVSQGFNPELQDSVLKSKAFSVLQTVLCDPNCSKQIREQAAFCVAALIRFNKDVFVGQVNMGDTIQALLEMKSAHSVKILCELIKFIKSPFVDEILCNGELPKILTLLESKDLSMKVVVFDCILEIGYFGRKEAVEAMLNGGLIEKLVELQRSEFGGDLIGMGKYGNENEESEGQKREKKFLENHPFASCVARFAVQLEVGEGLRKREKRAFKAEILEKVREASVNDAEAATIIAEVL 385
BLAST of g.arboreum_cottongen_reftransV1_0018389 vs. ExPASy TrEMBL
Match: A0A061GVT8_THECC (Uncharacterized protein OS=Theobroma cacao GN=TCM_038176 PE=4 SV=1) HSP 1 Score: 587.8 bits (1514), Expect = 0.000e+0 Identity = 306/388 (78.87%), Postives = 340/388 (87.63%), Query Frame = -1 Query: 1 MEDSSPKEDNPGVLKLLEALKQAIQELQAHPTHKSVQSNSSPIKALLELETESDSIISKDPLLSTLSRHLAELKILVETLERNRGYGLRSFLTRRVSTYSISRVAGSIESEIQALMDRGSIDSLINALKDPWKDEDELSRLLSQFEHRVSQGFNPELQDSVLKSKAFSVLQTVLCDPNCSKQIREKAAFCVAALIRFNKDVFVGQVNMGDTIQALLEMKSAHSVKVLCELITFIKSPFVDVILCNGELPKILTLLESKDLSMKVVVFNCILEIGYFGRKEAVEAMLNGGLIEKLVELQRSEFGGDLIGMGKY---GNENEVSEGKKREKKFLENHPFASCVARFAVQLEVGEGLRKREKRAFKPEILEKVREASVNDAEAATIIAEVL 1155 MED S KEDNP VLK+LEALKQA ELQAHPT+KS SNSS IKALLELETESDSI+S DP L TLS+HLA+LK VETL+R RGYGLRSFLTRRVST+SISRVAGSIESEIQA +DR SI+SLI LK+P K+EDEL RLL+QFE RVSQGFN ELQ+ VLKSKAFSVLQ+VLCDPNCSK+IRE AAFCVAALIRFNKDVFVGQVNMG TI ALL+M+S HS+KVLCELI F KSPFVD I+CNGE+P+ILTLLE+KDL MKV+ F+CILEIGYFGRKEA EA+L GGLI+ LVELQRSE GGDLI MGK+ E E + +KREK+FLENHPFASCVARFAVQLEVGEGLR+REKRAFK EILE+VR AS++DAEAATIIAEVL Sbjct: 1 MEDPSSKEDNPRVLKVLEALKQASHELQAHPTYKSANSNSSAIKALLELETESDSILSNDPHLFTLSQHLADLKTHVETLKRTRGYGLRSFLTRRVSTHSISRVAGSIESEIQAWIDRESIESLIKGLKEPGKNEDELVRLLTQFEDRVSQGFNCELQNLVLKSKAFSVLQSVLCDPNCSKRIRESAAFCVAALIRFNKDVFVGQVNMGGTIHALLDMRSTHSLKVLCELIKFTKSPFVDEIVCNGEIPEILTLLETKDLDMKVLAFDCILEIGYFGRKEAGEALLKGGLIKNLVELQRSELGGDLIEMGKFEAENKEIEEKKREKREKRFLENHPFASCVARFAVQLEVGEGLRQREKRAFKLEILERVRGASISDAEAATIIAEVL 388
BLAST of g.arboreum_cottongen_reftransV1_0018389 vs. ExPASy TrEMBL
Match: U5G650_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0006s06240g PE=4 SV=1) HSP 1 Score: 491.886 bits (1265), Expect = 2.619e-169 Identity = 257/386 (66.58%), Postives = 306/386 (79.27%), Query Frame = -1 Query: 1 MEDSSPKEDNPGVLKLLEALKQAIQELQAHPTHKSVQSNSSPIKALLELETESDSIISKDPLLSTLSRHLAELKILVETLERNRGYGLRSFLTRRVSTYSISRVAGSIESEIQALMDRGSIDSLINALKDPWK-DEDELSRLLSQFEHRVSQGFNPELQDSVLKSKAFSVLQTVLCDPNCSKQIREKAAFCVAALIRFNKDVFVGQVNMGDTIQALLEMKSAHSVKVLCELITFIKSPFVDVILCNGELPKILTLLESKDLSMKVVVFNCILEIGYFGRKEAVEAMLNGGLIEKLVELQRSEFGGDLIGMGKYGNENEVSEGKKREKKFLENHPFASCVARFAVQLEVGEGLRKREKRAFKPEILEKVREASVNDAEAATIIAEVL 1155 MED+ KE+ VLK+LEALKQA +LQ HP S +SNS +KALLELETESD+I+SKDPLLSTLS HLA LK L +TL+R+ G+GLRSFLTRRVST SISRVAGSIESEIQA +DR SID L+ LKDP + +E EL LLSQFE RV QGFN ELQD VLKSK F +L+ + CDP+CS+++RE+ AF V+ALIRFNKDVFVGQV MG I ++ M S S+KVL LI IKSP VD I NGE+PKI++ L+ KDL ++VV +CILEIGYFGRKEA+EAML LI+KLVELQRS+ GGDLI +G + +E E +G E +FLENHPFASCVARFAVQLEVGEGLR+RE+RAFK EIL+ VR A V++AEAATI+AEVL Sbjct: 2 MEDTPSKEEITRVLKVLEALKQASHDLQTHPGPNSAESNSPALKALLELETESDTILSKDPLLSTLSEHLASLKSLFDTLQRSCGHGLRSFLTRRVSTQSISRVAGSIESEIQAWIDRESIDRLMKGLKDPLQIEEGELVGLLSQFEDRVLQGFNRELQDLVLKSKIFCLLERISCDPSCSRKVREQCAFVVSALIRFNKDVFVGQVLMGRLIHGVVSMASWKSMKVLSSLIKSIKSPLVDEIESNGEIPKIISFLDYKDLHLRVVTMDCILEIGYFGRKEAIEAMLREALIKKLVELQRSKLGGDLIDIGMFDDEKERGKG---ETRFLENHPFASCVARFAVQLEVGEGLRQRERRAFKQEILKTVRNACVSNAEAATIVAEVL 384
BLAST of g.arboreum_cottongen_reftransV1_0018389 vs. ExPASy TrEMBL
Match: A0A0A0LT75_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G222880 PE=4 SV=1) HSP 1 Score: 487.649 bits (1254), Expect = 1.373e-167 Identity = 244/387 (63.05%), Postives = 313/387 (80.88%), Query Frame = -1 Query: 1 MEDSSPKEDNPGVLKLLEALKQAIQELQAHPTHKSVQSNSSPIKALLELETESDSIISKDPLLSTLSRHLAELKILVETLERNRGYGLRSFLTRRVSTYSISRVAGSIESEIQALMDRGSIDSLINALKDPWKDEDELSRLLSQFEHRVSQGFNPELQDSVLKSKAFSVLQTVLCDPNCSKQIREKAAFCVAALIRFNKDVFVGQVNMGDTIQALLEMKSAHSVKVLCELITFIKSPFVDVILCNGELPKILTLLESKDLSMKVVVFNCILEIGYFGRKEAVEAMLNGGLIEKLVELQRSEFGGDLIGMGKYGNE--NEVSEGKKREKKFLENHPFASCVARFAVQLEVGEGLRKREKRAFKPEILEKVREASVNDAEAATIIAEVL 1155 M+DSS ED+P V+++LEALKQA ELQ++P +S + NS IKALLELE ESD +S DP LSTLS HLA LK LV+TL+++RGY RSFLTRR +T S+S+VAGSIESEIQA +DR S+D+L+ ALK+P DE+EL +LL+QFE+R++QGFN ELQD +LKSK FS+L++++C+PN SK IRE +A+ + ++RFNKDVFVGQ+ MG TI AL+EM S+HS+K+LC LI I+SP V+ I NG++PKI++LL DL ++V+ +CI+EIGYFGRK+ V+AML LI++LVELQRSE GGDLIG+GK+ E EV+ G EK+FLE HPFASCVA+F VQLEVGEGLRKREKRA K EIL++VR+A V+DAEAATIIAEVL Sbjct: 1 MDDSSKNEDSPRVVRVLEALKQASHELQSNPNPRSHEFNSPAIKALLELEVESDKNLSTDPNLSTLSHHLANLKSLVDTLQKSRGYSPRSFLTRRFATNSVSQVAGSIESEIQAWIDRKSLDTLVRALKEPSIDENELIKLLTQFENRLAQGFNRELQDLMLKSKVFSLLESIVCNPNFSKTIREHSAYVIGGMVRFNKDVFVGQILMGPTIHALVEMASSHSLKILCSLIRLIRSPLVEEIESNGDIPKIISLLNCADLQIRVLAMDCIVEIGYFGRKDTVDAMLEQDLIDRLVELQRSELGGDLIGLGKHTAEESREVT-GSAGEKRFLEKHPFASCVAKFGVQLEVGEGLRKREKRAIKGEILKRVRKACVSDAEAATIIAEVL 386
BLAST of g.arboreum_cottongen_reftransV1_0018389 vs. ExPASy TrEMBL
Match: U7E1A3_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0025s00630g PE=4 SV=1) HSP 1 Score: 488.419 bits (1256), Expect = 1.824e-165 Identity = 259/386 (67.10%), Postives = 306/386 (79.27%), Query Frame = -1 Query: 1 MEDSSPKEDNPGVLKLLEALKQAIQELQAHPTHKSVQSNSSPIKALLELETESDSIISKDPLLSTLSRHLAELKILVETLERNRGYGLRSFLTRRVSTYSISRVAGSIESEIQALMDRGSIDSLINALKDPWK-DEDELSRLLSQFEHRVSQGFNPELQDSVLKSKAFSVLQTVLCDPNCSKQIREKAAFCVAALIRFNKDVFVGQVNMGDTIQALLEMKSAHSVKVLCELITFIKSPFVDVILCNGELPKILTLLESKDLSMKVVVFNCILEIGYFGRKEAVEAMLNGGLIEKLVELQRSEFGGDLIGMGKYGNENEVSEGKKREKKFLENHPFASCVARFAVQLEVGEGLRKREKRAFKPEILEKVREASVNDAEAATIIAEVL 1155 MED S KE+ VLK+LEALKQA ELQ P+ +SNS IKALLELETESD+I+SKDP LS LS+HL++LK LV+TL++ +GLRSFLTRRV SISRVAGSI SEIQA +DR SI+SLI L +P + +ED+L LLSQFE RVSQGFN ELQD VLKSK F +L+ VLC+PNCSK++RE+ AF V+ALIRFNKDVF GQV MG I AL+ M S S+KVLC LI IKSP VD I NGE+PKI++ L+ KDL +VV +CILEIGYFGRKEA+EAML GLI+KL+ELQRSE G DLI MG + +E E +G EKKF E+HPFASCVARFAVQLEVGEGLR+RE+RAFK EIL++VREA V+DAEAAT+IAEVL Sbjct: 2 MEDPSSKEEITRVLKVLEALKQASHELQTLPSTNLTESNSPAIKALLELETESDTILSKDPYLSALSQHLSKLKSLVDTLQKCCDHGLRSFLTRRVLIQSISRVAGSIGSEIQAWIDRKSIESLIKGLNEPLQTEEDDLVSLLSQFEDRVSQGFNRELQDLVLKSKIFCLLERVLCNPNCSKKVREQCAFVVSALIRFNKDVFAGQVLMGPLIHALVSMASWGSMKVLCSLIKSIKSPLVDEIESNGEIPKIISFLDYKDLHWRVVAMDCILEIGYFGRKEAIEAMLREGLIKKLMELQRSELGEDLIDMGMFDDEKERGKG---EKKFSESHPFASCVARFAVQLEVGEGLRQRERRAFKQEILKRVREACVSDAEAATVIAEVL 384
BLAST of g.arboreum_cottongen_reftransV1_0018389 vs. ExPASy TrEMBL
Match: A0A067G4V8_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g035696mg PE=4 SV=1) HSP 1 Score: 479.945 bits (1234), Expect = 3.020e-164 Identity = 262/400 (65.50%), Postives = 316/400 (79.00%), Query Frame = -1 Query: 1 MEDSSPKEDNPGVLKLLEALKQAIQELQAHPTHKSVQSNSSPIKALLELETESDSIISKDPLLSTLSRHLAELKILVETLERNRGYG-LRSFLTRRVSTYSISRVAGSIESEIQALMDRGSIDSLINALKDPWKDE---DELSRLLSQFEHRVSQGFNPELQDSVLKSKAFSVLQTVLCDPNCSKQIREKAAFCVAALIRFNKDVFVGQVNMGDTIQALLEMKSAHSVKVLCELITFIKSPFVDVILCNGELPKILTLLESKDLSMKVVVFNCILEIGYFGRKEAVEAMLNGGLIEKLVELQRSEFGGDLIGMGKY----GNENEVSEG-------KKREKKFLENHPFASCVARFAVQLEVGEGLRKREKRAFKPEILEKVREASVNDAEAATIIAEVL 1155 MED S + P VL +LEALKQA +LQAHP+ S + NSS IKALLELETESD+++S+DP LSTLS+HLA+LK LV+TL ++RG LRSFL RRVST+SISRVAGSIE+EIQA +DR I+ L ALKD D DEL +LL+QFE RVSQGF+ ELQD VLKSK FS+L+T+LC+P+CSK +RE++A+ +A+LIRFNKDVFVGQV MG T+QALL M S HS KVLCELI IKSP VD I NGE+PKI++LL+ KDL MK++ +CILEIGYFGRKEA++AML GL++KLVELQRSE GGDLI M ++ N+ V G + RE+KFL+ HPFASCVARFAVQLEVGEGLR+REKRA K EIL +VREAS +DAEAATI+AEVL Sbjct: 1 MEDPSVQVQAPRVLNVLEALKQASVDLQAHPSSNSAEFNSSAIKALLELETESDALLSEDPHLSTLSQHLADLKTLVQTLHKSRGRNSLRSFLARRVSTHSISRVAGSIETEIQAWIDREHIERLTKALKDLDGDGGNVDELVKLLTQFEDRVSQGFSRELQDLVLKSKVFSLLETILCNPSCSKSLREQSAYSIASLIRFNKDVFVGQVLMGPTVQALLTMSSTHSSKVLCELIKSIKSPLVDEIESNGEIPKIISLLDMKDLQMKLLAMDCILEIGYFGRKEAIDAMLEQGLVKKLVELQRSELGGDLIEMERFEEKEKNDRGVGAGGVVESKRESRERKFLKRHPFASCVARFAVQLEVGEGLRQREKRALKQEILLRVREASASDAEAATIVAEVL 400
BLAST of g.arboreum_cottongen_reftransV1_0018389 vs. ExPASy TrEMBL
Match: V4UJL9_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10008496mg PE=4 SV=1) HSP 1 Score: 479.174 bits (1232), Expect = 5.868e-164 Identity = 259/400 (64.75%), Postives = 318/400 (79.50%), Query Frame = -1 Query: 1 MEDSSPKEDNPGVLKLLEALKQAIQELQAHPTHKSVQSNSSPIKALLELETESDSIISKDPLLSTLSRHLAELKILVETLERNRGYG-LRSFLTRRVSTYSISRVAGSIESEIQALMDRGSIDSLINALKD---PWKDEDELSRLLSQFEHRVSQGFNPELQDSVLKSKAFSVLQTVLCDPNCSKQIREKAAFCVAALIRFNKDVFVGQVNMGDTIQALLEMKSAHSVKVLCELITFIKSPFVDVILCNGELPKILTLLESKDLSMKVVVFNCILEIGYFGRKEAVEAMLNGGLIEKLVELQRSEFGGDLIGMGKY----GNENEVSEG-------KKREKKFLENHPFASCVARFAVQLEVGEGLRKREKRAFKPEILEKVREASVNDAEAATIIAEVL 1155 MED S + P VL +LEALKQA +LQAHP+ S + NSS IKALLELETESD+++S+DP LSTLS+HLA+LK LV+TL ++RG LRSFL RRVST+SISRVAGSIE+EIQA +DR I+ L ALKD +EDEL +LL++FE RVSQGF+ ELQD VLKSK FS+L+T+LC+P+CSK +RE++A+ +A+LIRFNKDVFVGQV MG T+QALL M S HS+KVLCELI IKSP VD I NGE+PKI++L++ KDL MK++ +CILEIGYFGRKEA++AML GL++KLVELQRSE GGDLI M ++ N+ V G + RE+KFL+ HPFASCVARFAVQLEVGEGLR+RE+RA K EIL +VREAS +DAEAATI+AEVL Sbjct: 1 MEDPSVQVQAPRVLNVLEALKQASVDLQAHPSSNSAEFNSSAIKALLELETESDALLSEDPHLSTLSQHLADLKTLVQTLHKSRGRNSLRSFLARRVSTHSISRVAGSIETEIQAWIDREHIERLTKALKDLDGGGGNEDELVKLLTRFEGRVSQGFSRELQDLVLKSKVFSLLETILCNPSCSKSLREQSAYSIASLIRFNKDVFVGQVLMGPTVQALLTMSSTHSIKVLCELIKSIKSPLVDEIESNGEIPKIISLVDMKDLQMKLLAMDCILEIGYFGRKEAIDAMLEQGLVKKLVELQRSELGGDLIEMERFEEKEKNDRGVGAGGVVESKRESRERKFLKRHPFASCVARFAVQLEVGEGLRQRERRALKQEILLRVREASASDAEAATIVAEVL 400
BLAST of g.arboreum_cottongen_reftransV1_0018389 vs. ExPASy TrEMBL
Match: A0A067K215_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_17013 PE=4 SV=1) HSP 1 Score: 471.47 bits (1212), Expect = 4.073e-161 Identity = 254/390 (65.13%), Postives = 304/390 (77.95%), Query Frame = -1 Query: 1 MEDSSPKEDNPGVLKLLEALKQAIQELQAHPTHKSVQSNSSPIKALLELETESDSIISKDPLLSTLSRHLAELKILVETLERNRGYGLRSFLTRRVSTYSISRVAGSIESEIQALMDRGSIDSLINALKDPWKDEDE--LSRLLSQFEHRVSQGFNPELQDSVLKSKAFSVLQTVLCDP---NCSKQIREKAAFCVAALIRFNKDVFVGQVNMGDTIQALLEMKSAHSVKVLCELITFIKSPFVDVILCNGELPKILTLLESKDLSMKVVVFNCILEIGYFGRKEAVEAMLNGGLIEKLVELQRSEFGGDLIGMGKYGNENEVSEGKKREKKFLENHPFASCVARFAVQLEVGEGLRKREKRAFKPEILEKVREASVNDAEAATIIAEVL 1155 ME+ S KE+ VLK+LEALKQA +LQ HPT KS SNS IKALLELETESD+I+SKDP LSTLS+HL L+ L+E+L+ +RGY R+FL RRVST+SISRVAGSIESEIQA +DR SI+SL ALK+P K+E+E L LL+QFE+RVSQGFN ELQD VLKSK +L+ ++CDP N SK+I+E+ F VAALIRFNKDVFVGQV MG I AL+ M S S++VLC LI IKSP VD I NGE+PKI+ L+ KDL ++V+ CILEIGYFGRKEA+EAML GLI+KLVELQR + G DLI + + + E K +EKK LE PFA CVA+FAVQLEVGEGLR+REKRAFK EILE+V+EASV+DAEAATI+AEVL Sbjct: 1 MENPSSKEEISRVLKVLEALKQASHDLQLHPTPKSTDSNSPAIKALLELETESDTILSKDPNLSTLSQHLTSLRTLIESLQESRGYSFRNFLNRRVSTHSISRVAGSIESEIQAWIDRESIESLTAALKEPGKNENEEVLVSLLTQFENRVSQGFNRELQDLVLKSKILYILENIICDPNNNNWSKRIKEQCGFVVAALIRFNKDVFVGQVLMGPLIHALVSMASWKSIRVLCSLIKLIKSPLVDEIESNGEIPKIICFLDYKDLQIRVLAMECILEIGYFGRKEAIEAMLKEGLIKKLVELQRLDLGSDLIDISNF--DEEKESEKIKEKKVLERFPFAGCVAKFAVQLEVGEGLRQREKRAFKQEILERVKEASVSDAEAATIVAEVL 388
BLAST of g.arboreum_cottongen_reftransV1_0018389 vs. ExPASy TrEMBL
Match: B9SXP5_RICCO (Putative uncharacterized protein OS=Ricinus communis GN=RCOM_0003550 PE=4 SV=1) HSP 1 Score: 466.848 bits (1200), Expect = 2.397e-159 Identity = 245/389 (62.98%), Postives = 305/389 (78.41%), Query Frame = -1 Query: 1 MEDSSPKEDNPGVLKLLEALKQAIQELQAHPTHKSVQSNSSPIKALLELETESDSIISKDPLLSTLSRHLAELKILVETLERNRGYGLRSFLTRRVSTYSISRVAGSIESEIQALMDRGSIDSLINALK-DPWKDEDELSRLLSQFEHRVSQGFNPELQDSVLKSKAFSVLQTVLCDPNCSKQIREKAAFCVAALIRFNKDVFVGQVNMGDTIQALLEMKSAHSVKVLCELITFIKSPFVDVILCNGELPKILTLLESKDLSMKVVVFNCILEIGYFGRKEAVEAMLNGGLIEKLVELQRSEFGGDLIGMGKY---GNENEVSEGKKREKKFLENHPFASCVARFAVQLEVGEGLRKREKRAFKPEILEKVREASVNDAEAATIIAEVL 1155 MED S +++ V+K+LEALKQA +LQ+HP KS S +ALLEL+TES++I+SKDP LSTLS+HL+ LK LV+TL+++RG LR+FL RRVST+SISRVAGSIESEIQA +DR SID+L LK + +DE EL RLL+QFE+R+SQGF+ ELQD +LKSK F +L+ ++CD NC K +RE+ AF VAALI FNKDVFVGQV MG I AL+ M S ++KVLC LI IKSP VD I NGE+PKI++ L+ KDL ++V+ +C+LEIGYFGRKEA+EAML GLI+KLVELQR E GG LI M K+ G + E S + ++++F E+HPFASCVARFAVQLEVGEGLR+REKR FK EILEKVREASV+DAE A I+AEVL Sbjct: 1 MEDPSSRQEISRVIKVLEALKQASHDLQSHPIPKS----SDSFRALLELQTESETILSKDPNLSTLSQHLSRLKSLVDTLQKSRGRTLRNFLARRVSTHSISRVAGSIESEIQAWIDRESIDNLTAQLKKEGARDEPELIRLLTQFENRISQGFDRELQDLILKSKIFVLLEKIICDSNCLKSVREQCAFVVAALISFNKDVFVGQVLMGSLIHALVSMVSWKAMKVLCTLINLIKSPLVDEIESNGEIPKIISFLDYKDLELRVLTMDCVLEIGYFGRKEAIEAMLKEGLIKKLVELQRLELGGTLIDMDKFDGVGGKRE-STVESKDQRFSESHPFASCVARFAVQLEVGEGLRQREKRGFKLEILEKVREASVSDAETAAIVAEVL 384
BLAST of g.arboreum_cottongen_reftransV1_0018389 vs. ExPASy TrEMBL
Match: F6HCG4_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_11s0118g00250 PE=4 SV=1) HSP 1 Score: 466.848 bits (1200), Expect = 2.639e-159 Identity = 247/397 (62.22%), Postives = 301/397 (75.82%), Query Frame = -1 Query: 1 MEDSSPKEDNPGVLKLLEALKQAIQELQAHPTHKSVQSNSSPIKALLELETESDSIISKDPLLSTLSRHLAELKILVETLERNRGYGLRSFLTRRVSTYSISRVAGSIESEIQALMDRGSIDSLINALKDPWKDEDELSRLLSQFEHRVSQGFNPELQDSVLKSKAFSVLQTVLCDPNCSKQIREKAAFCVAALIRFNKDVFVGQVNMGDTIQALLEMKSAHSVKVLCELITFIKSPFVDVILCNGELPKILTLLESKDLSMKVVVFNCILEIGYFGRKEAVEAMLNGGLIEKLVELQRSEFGGDLIGMGKYGNENEVS-------EGKK-----REKKFLENHPFASCVARFAVQLEVGEGLRKREKRAFKPEILEKVREASVNDAEAATIIAEVL 1155 ME++S NP VL +LEAL+QA LQ +PT S SNSS IKALLELETES+S++S DP LS LSRHL+ LK LV TL+++RG+ L SFLTRR ST SISRVAGSIESEI+A +DR ++ L AL++ D+DEL +LL+QFE+RVSQGF+ ELQD +LKSK FS+L++VLC+PNCSK+IRE + F V+ALIRFNKDVFVGQV MG T+ AL+ M S S+ VL LI IKSP VD I NGE+PKI++ S+DL +++ +C EIGY+GRKEA+EAML G+IEKL+ELQRSE GG LI MG + E + EG + REK+FLE HPFASCVARFAVQLEVGEGLR+REKRAFK EIL VREA +DAEAATI+AEVL Sbjct: 1 MEEAS-DHPNPQVLTVLEALRQASHHLQTNPTLNSDNSNSSAIKALLELETESNSLLSSDPHLSALSRHLSSLKDLVHTLQKSRGHSLTSFLTRRASTQSISRVAGSIESEIRAWIDRERVEDLTRALRE-LADDDELVKLLTQFENRVSQGFSHELQDLILKSKVFSLLESVLCNPNCSKKIREHSGFAVSALIRFNKDVFVGQVLMGRTVLALIAMGSRSSLTVLWSLIKSIKSPLVDEIESNGEIPKIISFFSSQDLDIRIAAVDCAFEIGYYGRKEAIEAMLKEGVIEKLLELQRSEMGGILIEMGWFNEEENMKSFDGVDIEGIRRSRDSREKRFLETHPFASCVARFAVQLEVGEGLRQREKRAFKQEILGLVREACASDAEAATIVAEVL 395 The following BLAST results are available for this feature:
BLAST of g.arboreum_cottongen_reftransV1_0018389 vs. ExPASy TrEMBL
Analysis Date: 2016-11-15 (Homology Analysis for Gossypium arboreum CottonGen RefTrans V1 vs TrEMBL) Total hits: 25
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BLAST of g.arboreum_cottongen_reftransV1_0018389 vs. ExPASy Swiss-Prot
Analysis Date: 2016-11-15 (Homology Analysis for Gossypium arboreum CottonGen RefTrans V1 vs SwissProt) Total hits: 0
InterPro
Analysis Name: InterProScan analysis for Gossypium arboreum CottonGen RefTrans V1
Date Performed: 2016-11-14
Sequences
The
following sequences are available for this feature:
contig sequence >g.arboreum_cottongen_reftransV1_0018389 ID=g.arboreum_cottongen_reftransV1_0018389; Name=g.arboreum_cottongen_reftransV1_0018389; organism=Gossypium arboreum; type=contig; length=1230bpback to top |