g.arboreum_cottongen_reftransV1_0003209, g.arboreum_cottongen_reftransV1_0003209 (contig) Gossypium arboreum

Overview


Name	g.arboreum_cottongen_reftransV1_0003209
Unique Name	g.arboreum_cottongen_reftransV1_0003209
Type	contig
Organism	Gossypium arboreum (Tree cotton)
Sequence length	557

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
Chr7	chromosome	g.arboreum_cottongen_reftransV1_0003209:1..557 . Chr7:115204740..115214543 +

Analyses

This contig is derived from or has results from the following analyses


Analysis Name	Date Performed
Gossypium arboreum CottonGen RefTrans V1	2016-11-14
InterProScan analysis for Gossypium arboreum CottonGen RefTrans V1	2016-11-14
Homology Analysis for Gossypium arboreum CottonGen RefTrans V1 vs TrEMBL	2016-11-15
Homology Analysis for Gossypium arboreum CottonGen RefTrans V1 vs SwissProt	2016-11-15

Homology

[Close]

BLAST of g.arboreum_cottongen_reftransV1_0003209 vs. ExPASy TrEMBL
Match: A0A0D2R0F4_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_010G014300 PE=3 SV=1)

HSP 1 Score: 221.861 bits (564), Expect = 5.060e-77
Identity = 125/137 (91.24%), Postives = 130/137 (94.89%), Query Frame = 2

Query:  149 WKNLVHEFFELAGKFVVADALPFLRWLDIGGEEKRMKKVSKELDQLVEGWLREHREKIAENEANSEEDFMGVMLSKLR-DVEQHDANTINKANSLTLVLAAEDTTSITMTWXXXXXXXXXXXXXKVQQELDIHVGKD 556
            WK  V EFFEL+GK VVADALPFLRW DIGGEEKRMKKVSKELDQLVEGWLREH+EKIAENEANSEEDFMGVMLSKLR DVE+HDANT+NKA SL+LVLAAEDTTSITMTWALALLLNNRDALNKVQQELDIHVGKD
Sbjct:  221 WKKSVDEFFELSGKIVVADALPFLRWFDIGGEEKRMKKVSKELDQLVEGWLREHKEKIAENEANSEEDFMGVMLSKLRDDVEEHDANTVNKATSLSLVLAAEDTTSITMTWALALLLNNRDALNKVQQELDIHVGKD 357

HSP 2 Score: 92.4337 bits (228), Expect = 5.060e-77
Identity = 44/53 (83.02%), Postives = 49/53 (92.45%), Query Frame = 1

Query:    1 KKSSSGDKVLVEMRRWFRDVTLNVILMMVVGKRIPNSYEGVETVEWKNLVEEF 159
            KKSS+ DKVLVEM+RWF DVTLNVILM+VVGKRIPNSYEGVET+EWK  V+EF
Sbjct:  176 KKSSNSDKVLVEMKRWFGDVTLNVILMIVVGKRIPNSYEGVETMEWKKSVDEF 228

[Close]

BLAST of g.arboreum_cottongen_reftransV1_0003209 vs. ExPASy TrEMBL
Match: A0A0D2U493_GOSRA (Uncharacterized protein (Fragment) OS=Gossypium raimondii GN=B456_010G014500 PE=3 SV=1)

HSP 1 Score: 192.586 bits (488), Expect = 1.650e-64
Identity = 108/136 (79.41%), Postives = 122/136 (89.71%), Query Frame = 2

Query:  149 WKNLVHEFFELAGKFVVADALPFLRWLDIGGEEKRMKKVSKELDQLVEGWLREHREKIAENEANSEEDFMGVMLSKLRDVEQHDANTINKANSLTLVLAAEDTTSITMTWXXXXXXXXXXXXXKVQQELDIHVGKD 556
            WK  + + FEL GKFVV+DALP+LRW D GG++K MKKV+KELDQ+VE WLREH+EK AENEANSEEDFMGVMLS LRD E+HDA+TINKA SL L+LAAEDTTSITMTWAL+LLLNNRDALNKV+QELDIHVGKD
Sbjct:  214 WKKSLDDLFELTGKFVVSDALPYLRWSDFGGDKKLMKKVAKELDQVVEEWLREHKEKRAENEANSEEDFMGVMLSILRDAEEHDADTINKAVSLALILAAEDTTSITMTWALSLLLNNRDALNKVKQELDIHVGKD 349

HSP 2 Score: 80.1073 bits (196), Expect = 1.650e-64
Identity = 38/53 (71.70%), Postives = 46/53 (86.79%), Query Frame = 1

Query:    1 KKSSSGDKVLVEMRRWFRDVTLNVILMMVVGKRIPNSYEGVETVEWKNLVEEF 159
            KKSS+  KV+VEM+RWFRDVTLNVIL +VVGKRIPNSYEG ETV+WK  +++ 
Sbjct:  169 KKSSNCGKVIVEMKRWFRDVTLNVILRIVVGKRIPNSYEGDETVKWKKSLDDL 221

[Close]

BLAST of g.arboreum_cottongen_reftransV1_0003209 vs. ExPASy TrEMBL
Match: A0A0D2R0F9_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_010G014800 PE=3 SV=1)

HSP 1 Score: 192.586 bits (488), Expect = 2.436e-64
Identity = 106/136 (77.94%), Postives = 121/136 (88.97%), Query Frame = 2

Query:  149 WKNLVHEFFELAGKFVVADALPFLRWLDIGGEEKRMKKVSKELDQLVEGWLREHREKIAENEANSEEDFMGVMLSKLRDVEQHDANTINKANSLTLVLAAEDTTSITMTWXXXXXXXXXXXXXKVQQELDIHVGKD 556
            WK  + + FEL+GKF+++DALP+LRWLDIGG+EK MKKV+KELDQ+VE WLREH+EK AENEANS EDFMGVMLS LRD E+HDA+TINKA SL L LA EDTTSITMTWAL+LLLNNRDAL KV+QELDIHVGKD
Sbjct:  221 WKKSLDDLFELSGKFLISDALPYLRWLDIGGDEKSMKKVAKELDQVVEEWLREHKEKRAENEANSGEDFMGVMLSILRDAEEHDADTINKAVSLGLTLAVEDTTSITMTWALSLLLNNRDALKKVKQELDIHVGKD 356

HSP 2 Score: 79.7221 bits (195), Expect = 2.436e-64
Identity = 37/53 (69.81%), Postives = 46/53 (86.79%), Query Frame = 1

Query:    1 KKSSSGDKVLVEMRRWFRDVTLNVILMMVVGKRIPNSYEGVETVEWKNLVEEF 159
            KKSS+  KV+VEM+RWFRDVTLNV+L +VVGKRIPNSYEG ETV+WK  +++ 
Sbjct:  176 KKSSNCGKVMVEMKRWFRDVTLNVVLRIVVGKRIPNSYEGDETVKWKKSLDDL 228

[Close]

BLAST of g.arboreum_cottongen_reftransV1_0003209 vs. ExPASy TrEMBL
Match: A0A0D2U779_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_010G014700 PE=3 SV=1)

HSP 1 Score: 186.422 bits (472), Expect = 6.982e-64
Identity = 101/136 (74.26%), Postives = 123/136 (90.44%), Query Frame = 2

Query:  149 WKNLVHEFFELAGKFVVADALPFLRWLDIGGEEKRMKKVSKELDQLVEGWLREHREKIAENEANSEEDFMGVMLSKLRDVEQHDANTINKANSLTLVLAAEDTTSITMTWXXXXXXXXXXXXXKVQQELDIHVGKD 556
            WK  + +FFEL+GKF+++DALP+LRWLDIGG+EK MKKV+K+LDQ+ E WLREH+EK AEN ANSEEDFMG++LS L D E+HDA+TINKA SL L+LAAEDT++ITMTWAL+LLLNNRDALNKV+QELD+HVGKD
Sbjct:  221 WKKSLDDFFELSGKFLISDALPYLRWLDIGGDEKSMKKVAKDLDQVAEEWLREHKEKRAENGANSEEDFMGLLLSILSDTEEHDADTINKAISLNLILAAEDTSAITMTWALSLLLNNRDALNKVKQELDMHVGKD 356

HSP 2 Score: 84.3445 bits (207), Expect = 6.982e-64
Identity = 38/53 (71.70%), Postives = 48/53 (90.57%), Query Frame = 1

Query:    1 KKSSSGDKVLVEMRRWFRDVTLNVILMMVVGKRIPNSYEGVETVEWKNLVEEF 159
            KKSS+ DKVLV+M+RWFRDVTLN+IL +V+GKRIPNSYEG ETV+WK  +++F
Sbjct:  176 KKSSTCDKVLVDMKRWFRDVTLNIILRIVIGKRIPNSYEGDETVKWKKSLDDF 228

[Close]

BLAST of g.arboreum_cottongen_reftransV1_0003209 vs. ExPASy TrEMBL
Match: A0A061FC88_THECC (Cytochrome P450, putative OS=Theobroma cacao GN=TCM_033950 PE=3 SV=1)

HSP 1 Score: 191.43 bits (485), Expect = 1.970e-63
Identity = 103/136 (75.74%), Postives = 118/136 (86.76%), Query Frame = 2

Query:  149 WKNLVHEFFELAGKFVVADALPFLRWLDIGGEEKRMKKVSKELDQLVEGWLREHREKIAENEANSEEDFMGVMLSKLRDVEQHDANTINKANSLTLVLAAEDTTSITMTWXXXXXXXXXXXXXKVQQELDIHVGKD 556
            WK  + +F EL+GKFVV+DALPFLRWLDIGGEEK MKK++KELDQ+VEGWL+EH+ K A NEANSEEDFMGVMLS LRD E+HDA+T+NKA SL L+LAAEDTTS TMTWAL+LLLNNR+ L KVQQELD  VG D
Sbjct:  221 WKKSLDDFSELSGKFVVSDALPFLRWLDIGGEEKFMKKIAKELDQVVEGWLQEHKHKRAANEANSEEDFMGVMLSILRDAEEHDADTVNKATSLALILAAEDTTSTTMTWALSLLLNNRNRLKKVQQELDTQVGMD 356

HSP 2 Score: 77.7962 bits (190), Expect = 1.970e-63
Identity = 36/54 (66.67%), Postives = 45/54 (83.33%), Query Frame = 1

Query:    1 KKSSSGDKVLVEMRRWFRDVTLNVILMMVVGKRIPNSYEGVETVEWKNLVEEFG 162
            KK S+  KVLV+M+RWFRDV LNVILM++VGKRIPNS EG ETV+WK  +++F 
Sbjct:  176 KKRSNSAKVLVDMKRWFRDVVLNVILMIIVGKRIPNSSEGDETVKWKKSLDDFS 229

[Close]

BLAST of g.arboreum_cottongen_reftransV1_0003209 vs. ExPASy TrEMBL
Match: A0A0D2U768_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_010G014900 PE=3 SV=1)

HSP 1 Score: 184.882 bits (468), Expect = 4.306e-60
Identity = 98/136 (72.06%), Postives = 119/136 (87.50%), Query Frame = 2

Query:  149 WKNLVHEFFELAGKFVVADALPFLRWLDIGGEEKRMKKVSKELDQLVEGWLREHREKIAENEANSEEDFMGVMLSKLRDVEQHDANTINKANSLTLVLAAEDTTSITMTWXXXXXXXXXXXXXKVQQELDIHVGKD 556
            WK  + +FFEL+GKF+++DALPFLRWLDIGG+ K MKK +KELDQ+VEGWLREH++K AEN+ANSEEDFMGVMLS L D E+  A+TINKA  L ++LAAEDTTS+T+TWAL+LLLNNRD L+KVQQELD+ VGKD
Sbjct:  221 WKKYMDDFFELSGKFLISDALPFLRWLDIGGDMKYMKKTAKELDQVVEGWLREHKQKRAENKANSEEDFMGVMLSILSDAEELHADTINKATCLGIILAAEDTTSVTLTWALSLLLNNRDTLSKVQQELDVKVGKD 356

HSP 2 Score: 73.1738 bits (178), Expect = 4.306e-60
Identity = 33/53 (62.26%), Postives = 44/53 (83.02%), Query Frame = 1

Query:    1 KKSSSGDKVLVEMRRWFRDVTLNVILMMVVGKRIPNSYEGVETVEWKNLVEEF 159
            KKS++ DKVLVEM+ WF++VTLNVI  M+VGKRIPNS EG E ++WK  +++F
Sbjct:  176 KKSTNSDKVLVEMKGWFKEVTLNVITRMIVGKRIPNSSEGGENLKWKKYMDDF 228

[Close]

BLAST of g.arboreum_cottongen_reftransV1_0003209 vs. ExPASy TrEMBL
Match: A0A0D2U488_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_010G014200 PE=3 SV=1)

HSP 1 Score: 187.963 bits (476), Expect = 7.885e-60
Identity = 101/135 (74.81%), Postives = 120/135 (88.89%), Query Frame = 2

Query:  152 KNLVHEFFELAGKFVVADALPFLRWLDIGGEEKRMKKVSKELDQLVEGWLREHREKIAENEANSEEDFMGVMLSKLRDVEQHDANTINKANSLTLVLAAEDTTSITMTWXXXXXXXXXXXXXKVQQELDIHVGKD 556
            K L+ +FFE+AGKFV++D LPFL+WL++GG EK MKK++KELD++VEGWLREH+ K  E+ ANSEEDFMGVML  LRD E+HDA+TINKA SL L+LAAEDTTSITMTWAL+LLLNNRDALNKVQQELDIHVG +
Sbjct:  227 KELLEDFFEMAGKFVISDTLPFLKWLNVGGYEKSMKKIAKELDRIVEGWLREHKCKRGEDGANSEEDFMGVMLPILRDAEEHDADTINKATSLALILAAEDTTSITMTWALSLLLNNRDALNKVQQELDIHVGNN 361

HSP 2 Score: 69.3218 bits (168), Expect = 7.885e-60
Identity = 33/53 (62.26%), Postives = 44/53 (83.02%), Query Frame = 1

Query:    1 KKSSSGDKVLVEMRRWFRDVTLNVILMMVVGKRIPNSYEGVETVEWKNLVEEF 159
            KK ++ DKVLVEM+RWFRDVTLNV + ++VGKRI +S EG ET++ K L+E+F
Sbjct:  181 KKGTNCDKVLVEMKRWFRDVTLNVSMRIIVGKRISSSSEGGETMKCKELLEDF 233

[Close]

BLAST of g.arboreum_cottongen_reftransV1_0003209 vs. ExPASy TrEMBL
Match: A0A0D2V425_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_010G014600 PE=3 SV=1)

HSP 1 Score: 178.333 bits (451), Expect = 7.399e-58
Identity = 95/136 (69.85%), Postives = 116/136 (85.29%), Query Frame = 2

Query:  149 WKNLVHEFFELAGKFVVADALPFLRWLDIGGEEKRMKKVSKELDQLVEGWLREHREKIAENEANSEEDFMGVMLSKLRDVEQHDANTINKANSLTLVLAAEDTTSITMTWXXXXXXXXXXXXXKVQQELDIHVGKD 556
            WK  + +F  L+GKF+++DALPFLRWLDI G+ K MKK  KELDQ+V+GWLREH++K AEN+AN EEDFMGVMLS L D E+H A+TINKA  L+LVLAAED+TSIT+TW L+LLLNNRD L+KVQQEL++HVGKD
Sbjct:  221 WKKSMDDFIVLSGKFLISDALPFLRWLDICGDMKCMKKTGKELDQVVQGWLREHKQKRAENKANGEEDFMGVMLSILSDREEHHADTINKATCLSLVLAAEDSTSITLTWVLSLLLNNRDKLSKVQQELNVHVGKD 356

HSP 2 Score: 72.4034 bits (176), Expect = 7.399e-58
Identity = 32/53 (60.38%), Postives = 45/53 (84.91%), Query Frame = 1

Query:    1 KKSSSGDKVLVEMRRWFRDVTLNVILMMVVGKRIPNSYEGVETVEWKNLVEEF 159
            K+ ++ DKVLVEM+ WF++VTLNVI+ M+VGKRIPNS EGVE ++WK  +++F
Sbjct:  176 KRIANSDKVLVEMKGWFKEVTLNVIMRMIVGKRIPNSSEGVEQLKWKKSMDDF 228

[Close]

BLAST of g.arboreum_cottongen_reftransV1_0003209 vs. ExPASy TrEMBL
Match: A0A0D2V429_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_010G015200 PE=3 SV=1)

HSP 1 Score: 173.326 bits (438), Expect = 3.580e-56
Identity = 91/136 (66.91%), Postives = 117/136 (86.03%), Query Frame = 2

Query:  149 WKNLVHEFFELAGKFVVADALPFLRWLDIGGEEKRMKKVSKELDQLVEGWLREHREKIAENEANSEEDFMGVMLSKLRDVEQHDANTINKANSLTLVLAAEDTTSITMTWXXXXXXXXXXXXXKVQQELDIHVGKD 556
            W+  + +FF L+GKF+++DALPFLR+LDIGG+ K MKK +KELDQ+++GWLREH++K AEN+AN EEDFMGVMLS L + E+  A+T+NK N L L+L AEDTTSIT+TWAL+LLLNNRD L+KVQQELD+H+GKD
Sbjct:  221 WRKSMDDFFVLSGKFLISDALPFLRFLDIGGDIKFMKKTAKELDQVLQGWLREHKQKRAENKANGEEDFMGVMLSILSEAEEQHADTVNKINCLGLILGAEDTTSITLTWALSLLLNNRDKLSKVQQELDVHIGKD 356

HSP 2 Score: 71.633 bits (174), Expect = 3.580e-56
Identity = 31/53 (58.49%), Postives = 45/53 (84.91%), Query Frame = 1

Query:    1 KKSSSGDKVLVEMRRWFRDVTLNVILMMVVGKRIPNSYEGVETVEWKNLVEEF 159
            K+S++ DKVLVEM+ WF++VTLNVI+ M+VGKRIPNS EG E ++W+  +++F
Sbjct:  176 KRSANSDKVLVEMKGWFKEVTLNVIMRMIVGKRIPNSSEGGENLKWRKSMDDF 228

[Close]

BLAST of g.arboreum_cottongen_reftransV1_0003209 vs. ExPASy TrEMBL
Match: A0A061FD60_THECC (Cytochrome P450, putative OS=Theobroma cacao GN=TCM_033951 PE=3 SV=1)

HSP 1 Score: 166.392 bits (420), Expect = 8.567e-55
Identity = 94/137 (68.61%), Postives = 110/137 (80.29%), Query Frame = 2

Query:  149 WKNLVHEFFELAGKFVVADALPFLRWLDIGGEEKRMKKVSKELDQLVEGWLREHREKIAENEAN-SEEDFMGVMLSKLRDVEQHDANTINKANSLTLVLAAEDTTSITMTWXXXXXXXXXXXXXKVQQELDIHVGKD 556
            WK  + +F + +G  VV+DALPFLRWLDIGGE+K MKK++KELDQ+VEGWL+EH+ K A NEAN SEEDFMGVMLS   D E  D +TINKA  LTL+LAAE+T +I MTWAL+LLLNNRD L KVQQELD  VGKD
Sbjct:  224 WKKSLDDFIQPSGNIVVSDALPFLRWLDIGGEKKLMKKIAKELDQVVEGWLQEHKHKSAANEANKSEEDFMGVMLSFPCDTEGKDPDTINKATCLTLILAAEETITIAMTWALSLLLNNRDTLKKVQQELDTQVGKD 360

HSP 2 Score: 73.9442 bits (180), Expect = 8.567e-55
Identity = 32/53 (60.38%), Postives = 46/53 (86.79%), Query Frame = 1

Query:    1 KKSSSGDKVLVEMRRWFRDVTLNVILMMVVGKRIPNSYEGVETVEWKNLVEEF 159
            KK ++ D+VLV+M+RWF+DV+LN+IL ++VGKRIPNS EG ETV+WK  +++F
Sbjct:  179 KKRTNSDEVLVDMQRWFKDVSLNLILRIIVGKRIPNSSEGGETVKWKKSLDDF 231

[Close]

BLAST of g.arboreum_cottongen_reftransV1_0003209 vs. ExPASy Swiss-Prot
Match: C7D47_PANGI (Cytochrome P450 CYP82D47 OS=Panax ginseng PE=2 SV=1)

HSP 1 Score: 121.324 bits (303), Expect = 6.470e-33
Identity = 74/141 (52.48%), Postives = 99/141 (70.21%), Query Frame = 2

Query:  140 RIWWKNLVHEFFELAGKFVVADALPFLRWLDIGGEEKRMKKVSKELDQLVEGWLREHREKI-AENEANSEEDFMGVMLSKLRDVE--QHDANTINKANSLTLVLAAEDTTSITMTWXXXXXXXXXXXXXKVQQELDIHVGK 553
            R+W      EFF L G FVVAD+LPFLRWLD+GG EK MKK +KE+D +V GWL EHR K  + +E N+++DFM VMLS +++V+    DA+ + K+  + L+ +  DT  + +TWAL+LLLNNR AL K Q+ELD  VGK
Sbjct:  102 RVW-----REFFRLHGVFVVADSLPFLRWLDLGGYEKAMKKTAKEMDNIVSGWLEEHRMKRNSSDEDNTQQDFMDVMLSAVKNVDLCGFDADVVIKSTCMVLIASGTDTVGVELTWALSLLLNNRHALKKAQEELDNVVGK 237

HSP 2 Score: 40.0466 bits (92), Expect = 6.470e-33
Identity = 21/33 (63.64%), Postives = 26/33 (78.79%), Query Frame = 1

Query:    1 KKSSSGDKVLVEMRRWFRDVTLNVILMMVVGKR 99
            KK  SG +VLVEM++ F D+TLNV+L MV GKR
Sbjct:   53 KKDGSG-RVLVEMKKLFGDLTLNVVLRMVAGKR 84

[Close]

BLAST of g.arboreum_cottongen_reftransV1_0003209 vs. ExPASy Swiss-Prot
Match: C82A3_SOYBN (Cytochrome P450 82A3 OS=Glycine max GN=CYP82A3 PE=2 SV=1)

HSP 1 Score: 117.857 bits (294), Expect = 3.266e-30
Identity = 69/136 (50.74%), Postives = 93/136 (68.38%), Query Frame = 2

Query:  161 VHEFFELAGKFVVADALPFLRWLDIGGEEKRMKKVSKELDQLVEGWLREHREK--IAENEANSEEDFMGVMLSKLR--DVEQHDANTINKANSLTLVLAAEDTTSITMTWXXXXXXXXXXXXXKVQQELDIHVGKD 556
            + EF  L G F VAD +P LRWLD+GG EK MK  +KE+D+L+  WL EHR+K  + EN   S+ DFM VM+S L    +   DA+TI KA SL L+L   D+T++T+TWAL+LLL N  AL K ++E+D+ +GKD
Sbjct:  226 IREFMNLMGTFTVADGVPCLRWLDLGGHEKAMKANAKEVDKLLSEWLEEHRQKKLLGEN-VESDRDFMDVMISALNGAQIGAFDADTICKATSLELILGGTDSTAVTLTWALSLLLRNPLALGKAKEEIDMQIGKD 360

HSP 2 Score: 34.6538 bits (78), Expect = 3.266e-30
Identity = 21/55 (38.18%), Postives = 33/55 (60.00%), Query Frame = 1

Query:   10 SSGDK-----VLVEMRRWFRDVTLNVILMMVVGKRIPNSYEGVETVEWKNLVEEF 159
            S+G+K      LV++++W   +T N+++ MVVGKR    Y GV  VE K+  + F
Sbjct:  172 SNGNKNESRYTLVDIKQWLAYLTFNMVVRMVVGKR----YFGVMHVEGKDKAQRF 222

[Close]

BLAST of g.arboreum_cottongen_reftransV1_0003209 vs. ExPASy Swiss-Prot
Match: C82A1_PEA (Cytochrome P450 82A1 (Fragment) OS=Pisum sativum GN=CYP82A1 PE=2 SV=2)

HSP 1 Score: 112.464 bits (280), Expect = 4.540e-30
Identity = 62/137 (45.26%), Postives = 90/137 (65.69%), Query Frame = 2

Query:  161 VHEFFELAGKFVVADALPFLRWLDIGGEEKRMKKVSKELDQLVEGWLREHREKI---AENEANSEEDFMGVMLSKLRD--VEQHDANTINKANSLTLVLAAEDTTSITMTWXXXXXXXXXXXXXKVQQELDIHVGKD 556
            + +F  L G F V D +PFL+WLD+GG EK MKK +K+ D ++  WL EHREK    +E++   E DFM  ML  L+D  +E  D +TI KA +L L+L   DTT+ T+TWA+ LLL +   L K+++EL+ ++GK+
Sbjct:  241 IRDFMRLIGTFTVGDGVPFLKWLDLGGHEKEMKKCAKKFDVMLNEWLEEHREKKGLGSEDKVVGERDFMDAMLLVLKDKPIEGFDVDTIIKATTLELILGGSDTTAGTLTWAMCLLLKHPHVLEKLKEELNTYIGKE 377

HSP 2 Score: 39.6614 bits (91), Expect = 4.540e-30
Identity = 17/33 (51.52%), Postives = 25/33 (75.76%), Query Frame = 1

Query:    4 KSSSGDKVLVEMRRWFRDVTLNVILMMVVGKRI 102
            + S+ D V VE+++WF  +TLN++L MVVGKR 
Sbjct:  190 EPSTTDYVSVELKKWFAQLTLNMVLRMVVGKRC 222

[Close]

BLAST of g.arboreum_cottongen_reftransV1_0003209 vs. ExPASy Swiss-Prot
Match: C82A4_SOYBN (Cytochrome P450 82A4 OS=Glycine max GN=CYP82A4 PE=2 SV=1)

HSP 1 Score: 106.686 bits (265), Expect = 2.302e-26
Identity = 64/135 (47.41%), Postives = 87/135 (64.44%), Query Frame = 2

Query:  161 VHEFFELAGKFVVADALPFLRWLDIGGEEKRMKKVSKELDQLVEGWLREHREKIAENEA-NSEEDFMGVMLSKL--RDVEQHDANTINKANSLTLVLAAEDTTSITMTWXXXXXXXXXXXXXKVQQELDIHVGKD 556
            V EF  LAG F V DA+P+LRWLD GG EK MK+ +KELD ++  WL EHR+K A  E  +  +DFM VMLS L  + ++  DA+T+ K+  LT++ A  + +  T+ WA+ L+L N   L   + ELDI VGKD
Sbjct:  225 VDEFMRLAGVFTVGDAIPYLRWLDFGGYEKAMKETAKELDVMISEWLEEHRQKRALGEGVDGAQDFMNVMLSSLDGKTIDGIDADTLIKSTVLTIIQAGTEASISTIIWAMCLILKNPLILEN-KAELDIQVGKD 358

HSP 2 Score: 32.7278 bits (73), Expect = 2.302e-26
Identity = 15/44 (34.09%), Postives = 24/44 (54.55%), Query Frame = 1

Query:    4 KSSSGDKVLVEMRRWFRDVTLNVILMMVVGKRIPNSYEGVETVE 135
            + +  D   VE+++WF     N++L MVVGKR  ++    E  E
Sbjct:  176 QKNESDYASVELKQWFAQPIFNMVLRMVVGKRFLSATATDEKAE 219

[Close]

BLAST of g.arboreum_cottongen_reftransV1_0003209 vs. ExPASy Swiss-Prot
Match: C82C3_ARATH (Cytochrome P450 82C3 OS=Arabidopsis thaliana GN=CYP82C3 PE=2 SV=3)

HSP 1 Score: 107.071 bits (266), Expect = 1.098e-25
Identity = 72/162 (44.44%), Postives = 101/162 (62.35%), Query Frame = 2

Query:   92 GNEYQIHTKELKPWNGRIWWKNLVHEFFELAGKFVVADALPFLRWLDIGGEEKRMKKVSKELDQLVEGWLREHRE--KIAENEANSEEDFMGVMLS-----KLRDVEQHDANTINKANSLTLVLAAEDTTSITMTWXXXXXXXXXXXXXKVQQELDIHVGKD 556
            G E   HT+E +       W+  + +FF L G F V+DA P L WLD+ G EK MK+  +ELD ++E W+  HR+  K++  + N + DF+ VMLS     KL  + Q+DANT  K   L L+L   +T+  T+TWA++LLLNN+D L KVQ E+DIHVG+D
Sbjct:  193 GAESSEHTEEAR------QWRKGIAKFFHLVGIFTVSDAFPKLGWLDLQGHEKEMKQTRRELDVILERWIENHRQQRKVSGTKHN-DSDFVDVMLSLAEQGKLSHL-QYDANTCIKTTCLALILGGSETSPSTLTWAISLLLNNKDMLKKVQDEIDIHVGRD 346

[Close]

BLAST of g.arboreum_cottongen_reftransV1_0003209 vs. ExPASy Swiss-Prot
Match: C82C4_ARATH (Cytochrome P450 82C4 OS=Arabidopsis thaliana GN=CYP82C4 PE=2 SV=1)

HSP 1 Score: 99.3673 bits (246), Expect = 1.436e-24
Identity = 63/142 (44.37%), Postives = 91/142 (64.08%), Query Frame = 2

Query:  152 KNLVHEFFELAGKFVVADALPFLRWLDIGGEEKRMKKVSKELDQLVEGWLREHRE--KIAENEANSEEDFMGVMLS-----KLRDVEQHDANTINKANSLTLVLAAEDTTSITMTWXXXXXXXXXXXXXKVQQELDIHVGKD 556
            K  + +FF L G F V+DA P L + D+ G EK MK+   ELD ++E W+  HR+  K +  + N + DF+ VM+S     KL  + Q+DANT  K+  L L+L   DT++ T+TWA++LLLNN++ L K Q E+DIHVG+D
Sbjct:  219 KKAIAKFFHLIGIFTVSDAFPTLSFFDLQGHEKEMKQTGSELDVILERWIENHRQQRKFSGTKEN-DSDFIDVMMSLAEQGKLSHL-QYDANTSIKSTCLALILGGSDTSASTLTWAISLLLNNKEMLKKAQDEIDIHVGRD 358

HSP 2 Score: 34.2686 bits (77), Expect = 1.436e-24
Identity = 14/32 (43.75%), Postives = 22/32 (68.75%), Query Frame = 1

Query:    4 KSSSGDKVLVEMRRWFRDVTLNVILMMVVGKR 99
            K+     V+V+++ W  D+TLN+I+ MV GKR
Sbjct:  168 KNGGTKPVMVDLKSWLEDMTLNMIVRMVAGKR 199

[Close]

BLAST of g.arboreum_cottongen_reftransV1_0003209 vs. ExPASy Swiss-Prot
Match: C82C2_ARATH (Cytochrome P450 82C2 OS=Arabidopsis thaliana GN=CYP82C2 PE=2 SV=2)

HSP 1 Score: 97.8265 bits (242), Expect = 1.324e-23
Identity = 63/138 (45.65%), Postives = 86/138 (62.32%), Query Frame = 2

Query:  161 VHEFFELAGKFVVADALPFLRWLDIGGEEKRMKKVSKELDQLVEGWLREHRE--KIAENEANSEEDFMGVMLSKLRDVE----QHDANTINKANSLTLVLAAEDTTSITMTWXXXXXXXXXXXXXKVQQELDIHVGKD 556
            V  FF L G F V+DA P L W D  G EK MK+  +ELD ++E W+  HR+  K++  + N + DF+ VMLS     +    QHDA T  K+  L L+L   +T+  T+TWA++LLLNN+D L K Q E+DIHVG+D
Sbjct:  221 VANFFHLVGIFTVSDAFPKLGWFDFQGHEKEMKQTGRELDVILERWIENHRQQRKVSGTKHN-DSDFVDVMLSLAEQGKFSHLQHDAITSIKSTCLALILGGSETSPSTLTWAISLLLNNKDMLKKAQDEIDIHVGRD 357

HSP 2 Score: 32.3426 bits (72), Expect = 1.324e-23
Identity = 12/32 (37.50%), Postives = 22/32 (68.75%), Query Frame = 1

Query:    4 KSSSGDKVLVEMRRWFRDVTLNVILMMVVGKR 99
            K    + V+V+++ W  D++LN+++ MV GKR
Sbjct:  168 KKGGSEPVMVDLKSWLEDMSLNMMVRMVAGKR 199

[Close]

BLAST of g.arboreum_cottongen_reftransV1_0003209 vs. ExPASy Swiss-Prot
Match: C82A2_SOYBN (Cytochrome P450 82A2 OS=Glycine max GN=CYP82A2 PE=2 SV=1)

HSP 1 Score: 93.2041 bits (230), Expect = 1.485e-21
Identity = 56/134 (41.79%), Postives = 83/134 (61.94%), Query Frame = 2

Query:  161 VHEFFELAGKFVVADALPFLRWLDIGGEEKRMKKVSKELDQLVEGWLREHREKIAENEANSEEDFMGVMLSKL--RDVEQHDANTINKANSLTLVLAAEDTTSITMTWXXXXXXXXXXXXXKVQQELDIHVGKD 556
            V EF  LA  F V DA+P+LRW D GG E  M++  KELD+++  WL EHR+K    E  + +D M V+LS L  + +E  + + + K+  LT++ A  + +  T+ WA +L+LNN   L K++ ELDI VGK+
Sbjct:  224 VDEFVRLAATFTVGDAIPYLRWFDFGGYENDMRETGKELDEIIGEWLDEHRQKRKMGE--NVQDLMSVLLSLLEGKTIEGMNVDIVIKSFVLTVIQAGTEASITTLIWATSLILNNPSVLEKLKAELDIQVGKE 355

HSP 2 Score: 30.0314 bits (66), Expect = 1.485e-21
Identity = 12/23 (52.17%), Postives = 17/23 (73.91%), Query Frame = 1

Query:   31 VEMRRWFRDVTLNVILMMVVGKR 99
            VE+++WF  +  N+IL MV GKR
Sbjct:  183 VELKQWFSLLVFNMILRMVCGKR 205

[Close]

BLAST of g.arboreum_cottongen_reftransV1_0003209 vs. ExPASy Swiss-Prot
Match: P6H_ESCCA (Protopine 6-monooxygenase OS=Eschscholzia californica GN=CYP82N2v2 PE=1 SV=1)

HSP 1 Score: 87.4261 bits (215), Expect = 1.207e-20
Identity = 57/141 (40.43%), Postives = 91/141 (64.54%), Query Frame = 2

Query:  143 IWWKNLVHEFFELAGKFVVADALPFLRWLDI-GGEEKRMKKVSKELDQLVEGWLREHREKIAENEANSEEDFMGVMLSKLRD--VEQHDANTINKANSLTLVLAAEDTTSITMTWXXXXXXXXXXXXXKVQQELDIHVGKD 556
            I +K ++ E   LA   + +D  P L ++DI  G    MK+ +K++D ++E WL EHR+K   + A S++DFM VMLS + +  +  HDA+ + KA  L +++   DTT++++TW ++LL+NNR AL K ++ELD  VGKD
Sbjct:  220 IHYKKVMDELLRLASLSMFSDFAPLLGFVDIFQGNLSAMKRNAKKVDAILENWLEEHRKK-KNSVAESQQDFMDVMLSIVEESKLSGHDADAVIKATCLAMIMGGTDTTAVSLTWIISLLMNNRHALKKAREELDALVGKD 359

HSP 2 Score: 32.7278 bits (73), Expect = 1.207e-20
Identity = 11/33 (33.33%), Postives = 24/33 (72.73%), Query Frame = 1

Query:    1 KKSSSGDKVLVEMRRWFRDVTLNVILMMVVGKR 99
            K  S    +L++M++WF +V+ NV++ ++VG++
Sbjct:  174 KNPSGSAPILIDMKKWFEEVSNNVVMRVIVGRQ 206

[Close]

BLAST of g.arboreum_cottongen_reftransV1_0003209 vs. ExPASy Swiss-Prot
Match: P6H_PAPSO (Protopine 6-monooxygenase OS=Papaver somniferum GN=CYP82N3 PE=2 SV=1)

HSP 1 Score: 82.8037 bits (203), Expect = 3.974e-17
Identity = 52/141 (36.88%), Postives = 90/141 (63.83%), Query Frame = 2

Query:  143 IWWKNLVHEFFELAGKFVVADALPFLRWLD-IGGEEKRMKKVSKELDQLVEGWLREHREKIAENEANSEEDFMGVMLSKLRDVE--QHDANTINKANSLTLVLAAEDTTSITMTWXXXXXXXXXXXXXKVQQELDIHVGKD 556
            + +K ++ E   L+   +++D +P L WLD   G+ + MK+  KEL+ +++ WL EH+ K     +++ +DFM VMLS  +D +   HD +T  KA  L +++   ++T + +TW L+LL+NNR AL+K ++E+D+ VGKD
Sbjct:  236 VHYKKIMDELSRLSSLTMLSDMVPLLGWLDYFKGDLRAMKRNGKELNSILQKWLEEHKSK---KSSDARQDFMDVMLSISKDTQLYGHDQDTFIKATCLAMIMGGTNSTEVALTWILSLLMNNRCALHKAREEIDLLVGKD 373

The following BLAST results are available for this feature:

BLAST of g.arboreum_cottongen_reftransV1_0003209 vs. ExPASy TrEMBL
BLAST of g.arboreum_cottongen_reftransV1_0003209 vs. ExPASy Swiss-Prot

BLAST of g.arboreum_cottongen_reftransV1_0003209 vs. ExPASy TrEMBL
Analysis Date: 2016-11-15 (Homology Analysis for Gossypium arboreum CottonGen RefTrans V1 vs TrEMBL)
Total hits: 25


Match Name	E-value	Identity	Description
A0A0D2R0F4_GOSRA	5.060e-77	91.24	Uncharacterized protein OS=Gossypium raimondii GN=...	[more]
A0A0D2U493_GOSRA	1.650e-64	79.41	Uncharacterized protein (Fragment) OS=Gossypium ra...	[more]
A0A0D2R0F9_GOSRA	2.436e-64	77.94	Uncharacterized protein OS=Gossypium raimondii GN=...	[more]
A0A0D2U779_GOSRA	6.982e-64	74.26	Uncharacterized protein OS=Gossypium raimondii GN=...	[more]
A0A061FC88_THECC	1.970e-63	75.74	Cytochrome P450, putative OS=Theobroma cacao GN=TC...	[more]
A0A0D2U768_GOSRA	4.306e-60	72.06	Uncharacterized protein OS=Gossypium raimondii GN=...	[more]
A0A0D2U488_GOSRA	7.885e-60	74.81	Uncharacterized protein OS=Gossypium raimondii GN=...	[more]
A0A0D2V425_GOSRA	7.399e-58	69.85	Uncharacterized protein OS=Gossypium raimondii GN=...	[more]
A0A0D2V429_GOSRA	3.580e-56	66.91	Uncharacterized protein OS=Gossypium raimondii GN=...	[more]
A0A061FD60_THECC	8.567e-55	68.61	Cytochrome P450, putative OS=Theobroma cacao GN=TC...	[more]

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BLAST of g.arboreum_cottongen_reftransV1_0003209 vs. ExPASy Swiss-Prot
Analysis Date: 2016-11-15 (Homology Analysis for Gossypium arboreum CottonGen RefTrans V1 vs SwissProt)
Total hits: 25


Match Name	E-value	Identity	Description
C7D47_PANGI	6.470e-33	52.48	Cytochrome P450 CYP82D47 OS=Panax ginseng PE=2 SV=...	[more]
C82A3_SOYBN	3.266e-30	50.74	Cytochrome P450 82A3 OS=Glycine max GN=CYP82A3 PE=...	[more]
C82A1_PEA	4.540e-30	45.26	Cytochrome P450 82A1 (Fragment) OS=Pisum sativum G...	[more]
C82A4_SOYBN	2.302e-26	47.41	Cytochrome P450 82A4 OS=Glycine max GN=CYP82A4 PE=...	[more]
C82C3_ARATH	1.098e-25	44.44	Cytochrome P450 82C3 OS=Arabidopsis thaliana GN=CY...	[more]
C82C4_ARATH	1.436e-24	44.37	Cytochrome P450 82C4 OS=Arabidopsis thaliana GN=CY...	[more]
C82C2_ARATH	1.324e-23	45.65	Cytochrome P450 82C2 OS=Arabidopsis thaliana GN=CY...	[more]
C82A2_SOYBN	1.485e-21	41.79	Cytochrome P450 82A2 OS=Glycine max GN=CYP82A2 PE=...	[more]
P6H_ESCCA	1.207e-20	40.43	Protopine 6-monooxygenase OS=Eschscholzia californ...	[more]
P6H_PAPSO	3.974e-17	36.88	Protopine 6-monooxygenase OS=Papaver somniferum GN...	[more]

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InterPro

Analysis Name: InterProScan analysis for Gossypium arboreum CottonGen RefTrans V1
Date Performed: 2016-11-14


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001128	Cytochrome P450	GENE3D	1.10.630.10		coord: 10..144 e-value: 5.8E-27 score: 93.9
IPR001128	Cytochrome P450	PFAM	PF00067	p450	coord: 12..144 e-value: 2.5E-16 score: 59.3
IPR001128	Cytochrome P450	SUPERFAMILY	48264	Cytochrome P450	coord: 9..144
None	No IPR available	PANTHER	PTHR24298	FAMILY NOT NAMED	coord: 10..145
None	No IPR available	PANTHER	PTHR24298:SF102	SUBFAMILY NOT NAMED	coord: 10..145

Sequences

The following sequences are available for this feature:

contig sequence

contig sequence

>g.arboreum_cottongen_reftransV1_0003209 ID=g.arboreum_cottongen_reftransV1_0003209; Name=g.arboreum_cottongen_reftransV1_0003209; organism=Gossypium arboreum; type=contig; length=557bp
AAGAAAAGTAGTAGCGGTGACAAAGTATTGGTGGAGATGAGGAGATGGTT
CAGAGATGTTACACTTAACGTGATACTAATGATGGTTGTAGGGAAACGAA
TACCAAATTCATACGAAGGAGTTGAAACCGTGGAATGGAAGAATTTGGTG
GAAGAATTTGGTGCACGAATTCTTTGAACTAGCTGGGAAGTTCGTGGTGG
CAGATGCATTGCCGTTTTTGAGATGGTTAGATATTGGTGGAGAAGAGAAG
CGCATGAAGAAGGTATCCAAAGAATTGGACCAACTTGTTGAGGGATGGCT
ACGAGAACACAGGGAAAAGATAGCTGAAAATGAGGCAAATAGTGAGGAAG
ATTTCATGGGAGTGATGCTATCTAAGCTCCGTGATGTTGAGCAACATGAT
GCCAATACCATCAACAAAGCCAACAGTCTCACTCTTGTATTAGCTGCAGA
AGACACGACATCGATTACAATGACATGGGCTTTAGCTTTATTGCTTAATA
ATCGTGATGCATTGAACAAGGTCCAACAAGAATTAGACATCCATGTTGGC
AAGGATA

Annotated Terms

The following terms have been associated with this contig:

Vocabulary: **INTERPRO**
Term	Definition
IPR001128	Cyt_P450

Vocabulary: **Molecular Function**
Term	Definition
GO:0005506	iron ion binding
GO:0020037	heme binding
GO:0016705	oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen

Vocabulary: **Biological Process**
Term	Definition
GO:0055114	obsolete oxidation-reduction process

Search form

g.arboreum_cottongen_reftransV1_0003209, g.arboreum_cottongen_reftransV1_0003209 (contig) Gossypium arboreum

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