g.arboreum_cottongen_reftransV1_0020385, g.arboreum_cottongen_reftransV1_0020385 (contig) Gossypium arboreum

Overview


Name	g.arboreum_cottongen_reftransV1_0020385
Unique Name	g.arboreum_cottongen_reftransV1_0020385
Type	contig
Organism	Gossypium arboreum (Tree cotton)
Sequence length	693

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
Chr6	chromosome	g.arboreum_cottongen_reftransV1_0020385:1..693 . Chr6:120442820..120443843 +

Analyses

This contig is derived from or has results from the following analyses


Analysis Name	Date Performed
Gossypium arboreum CottonGen RefTrans V1	2016-11-14
InterProScan analysis for Gossypium arboreum CottonGen RefTrans V1	2016-11-14
Homology Analysis for Gossypium arboreum CottonGen RefTrans V1 vs TrEMBL	2016-11-15
Homology Analysis for Gossypium arboreum CottonGen RefTrans V1 vs SwissProt	2016-11-15

Homology

[Close]

BLAST of g.arboreum_cottongen_reftransV1_0020385 vs. ExPASy TrEMBL
Match: A0A0D2T8M3_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_008G284900 PE=4 SV=1)

HSP 1 Score: 313.153 bits (801), Expect = 1.849e-98
Identity = 168/174 (96.55%), Postives = 169/174 (97.13%), Query Frame = -1

Query:    1 VCSLSTATDVRSRSAVLWFKHDLRLDDHPALSAAETHRFVLPLYVFDRRILCRYSXXXXXXXXXXXXXLRNSLKEQGSNLMIRYGCAENVIKELVKEVKATDVFIEEEVEYEMRQLIGVVKKTLETSSSLDWNLDIVMWRTPFYDVKNLKELPASYNDFKEQKLLPTSPLLPAT 522
            VCSLS ATDVRSRSAVLWFKHDLRLDDHPALSAAETHRFVLPLYVFDRRIL RYSDDMLELLLFALEDLR SLKEQGSNLMIRYGCAENVIKELVKEVKATDVFIEEEVEYEMRQLIGVVKKTLETSSSLDWNLDIVMWRTPFYDVKNLKELPASYNDFK+QKLLPTSPL P T
Sbjct:   32 VCSLSAATDVRSRSAVLWFKHDLRLDDHPALSAAETHRFVLPLYVFDRRILSRYSDDMLELLLFALEDLRKSLKEQGSNLMIRYGCAENVIKELVKEVKATDVFIEEEVEYEMRQLIGVVKKTLETSSSLDWNLDIVMWRTPFYDVKNLKELPASYNDFKKQKLLPTSPLFPVT 205

[Close]

BLAST of g.arboreum_cottongen_reftransV1_0020385 vs. ExPASy TrEMBL
Match: A0A0D2UBE3_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_008G284900 PE=4 SV=1)

HSP 1 Score: 312.768 bits (800), Expect = 2.344e-98
Identity = 168/174 (96.55%), Postives = 169/174 (97.13%), Query Frame = -1

Query:    1 VCSLSTATDVRSRSAVLWFKHDLRLDDHPALSAAETHRFVLPLYVFDRRILCRYSXXXXXXXXXXXXXLRNSLKEQGSNLMIRYGCAENVIKELVKEVKATDVFIEEEVEYEMRQLIGVVKKTLETSSSLDWNLDIVMWRTPFYDVKNLKELPASYNDFKEQKLLPTSPLLPAT 522
            VCSLS ATDVRSRSAVLWFKHDLRLDDHPALSAAETHRFVLPLYVFDRRIL RYSDDMLELLLFALEDLR SLKEQGSNLMIRYGCAENVIKELVKEVKATDVFIEEEVEYEMRQLIGVVKKTLETSSSLDWNLDIVMWRTPFYDVKNLKELPASYNDFK+QKLLPTSPL P T
Sbjct:   32 VCSLSAATDVRSRSAVLWFKHDLRLDDHPALSAAETHRFVLPLYVFDRRILSRYSDDMLELLLFALEDLRKSLKEQGSNLMIRYGCAENVIKELVKEVKATDVFIEEEVEYEMRQLIGVVKKTLETSSSLDWNLDIVMWRTPFYDVKNLKELPASYNDFKKQKLLPTSPLFPVT 205

[Close]

BLAST of g.arboreum_cottongen_reftransV1_0020385 vs. ExPASy TrEMBL
Match: A0A0B0N842_GOSAR (Uncharacterized protein OS=Gossypium arboreum GN=F383_34875 PE=4 SV=1)

HSP 1 Score: 217.624 bits (553), Expect = 2.794e-92
Identity = 105/105 (100.00%), Postives = 105/105 (100.00%), Query Frame = -1

Query:    1 RNSLKEQGSNLMIRYGCAENVIKELVKEVKATDVFIEEEVEYEMRQLIGVVKKTLETSSSLDWNLDIVMWRTPFYDVKNLKELPASYNDFKEQKLLPTSPLLPAT 315
            RNSLKEQGSNLMIRYGCAENVIKELVKEVKATDVFIEEEVEYEMRQLIGVVKKTLETSSSLDWNLDIVMWRTPFYDVKNLKELPASYNDFKEQKLLPTSPLLPAT
Sbjct:  113 RNSLKEQGSNLMIRYGCAENVIKELVKEVKATDVFIEEEVEYEMRQLIGVVKKTLETSSSLDWNLDIVMWRTPFYDVKNLKELPASYNDFKEQKLLPTSPLLPAT 217

HSP 2 Score: 148.673 bits (374), Expect = 2.794e-92
Identity = 90/93 (96.77%), Postives = 92/93 (98.92%), Query Frame = -2

Query:  354 MDSVTPWXXXXXXXXXXXFPRHFTSFLLVQSAVAVPSFARFLLLRMYALVPPFSGSNTTSASTITPLSLPLKRTVLFSLSMSSIAAFSVVILM 632
            MDSVTPWLSFLSLALSHSFPRHFTSFLLVQSAVAVPSFARFLLLRMYALVPPFSGSNTTSASTITPLSLPLKRTVLFSLSMSSIAAFSV +L+
Sbjct:    1 MDSVTPWLSFLSLALSHSFPRHFTSFLLVQSAVAVPSFARFLLLRMYALVPPFSGSNTTSASTITPLSLPLKRTVLFSLSMSSIAAFSVSLLL 93

[Close]

BLAST of g.arboreum_cottongen_reftransV1_0020385 vs. ExPASy TrEMBL
Match: A0A061FZF4_THECC (Hydrolase, putative isoform 2 OS=Theobroma cacao GN=TCM_014959 PE=4 SV=1)

HSP 1 Score: 238.81 bits (608), Expect = 1.064e-70
Identity = 145/176 (82.39%), Postives = 158/176 (89.77%), Query Frame = -1

Query:    1 VCSLST-ATDVRSRSAVLWFKHDLRLDDHPAL-SAAETHRFVLPLYVFDRRILCRYSXXXXXXXXXXXXXLRNSLKEQGSNLMIRYGCAENVIKELVKEVKATDVFIEEEVEYEMRQLIGVVKKTLETSSSLDWNLDIVMWRTPFYDVKNLKELPASYNDFKEQKLLPTSPLLPAT 522
            +CSLS  A   +S SA+LWFKHDLRLDDHPAL +AAETHR +LPLYVFD RIL RYSD+MLEL+LFALEDLRNSLKEQGSNLMIR+G AENVI ELVKEVKATDVF+EEEVEYEMRQ++GVVK TLETSSSLD N DIVMWRTPFYDVKNLK+LPASYNDFK+ KLLPTSPL P T
Sbjct:   31 ICSLSAGAGRTKSGSAILWFKHDLRLDDHPALVAAAETHRSLLPLYVFDHRILSRYSDEMLELVLFALEDLRNSLKEQGSNLMIRFGSAENVITELVKEVKATDVFVEEEVEYEMRQIVGVVKDTLETSSSLDGNPDIVMWRTPFYDVKNLKDLPASYNDFKKLKLLPTSPLPPVT 206

[Close]

BLAST of g.arboreum_cottongen_reftransV1_0020385 vs. ExPASy TrEMBL
Match: A0A061G7A2_THECC (Hydrolase, putative isoform 1 OS=Theobroma cacao GN=TCM_014959 PE=4 SV=1)

HSP 1 Score: 239.195 bits (609), Expect = 2.334e-70
Identity = 145/176 (82.39%), Postives = 158/176 (89.77%), Query Frame = -1

Query:    1 VCSLST-ATDVRSRSAVLWFKHDLRLDDHPAL-SAAETHRFVLPLYVFDRRILCRYSXXXXXXXXXXXXXLRNSLKEQGSNLMIRYGCAENVIKELVKEVKATDVFIEEEVEYEMRQLIGVVKKTLETSSSLDWNLDIVMWRTPFYDVKNLKELPASYNDFKEQKLLPTSPLLPAT 522
            +CSLS  A   +S SA+LWFKHDLRLDDHPAL +AAETHR +LPLYVFD RIL RYSD+MLEL+LFALEDLRNSLKEQGSNLMIR+G AENVI ELVKEVKATDVF+EEEVEYEMRQ++GVVK TLETSSSLD N DIVMWRTPFYDVKNLK+LPASYNDFK+ KLLPTSPL P T
Sbjct:   31 ICSLSAGAGRTKSGSAILWFKHDLRLDDHPALVAAAETHRSLLPLYVFDHRILSRYSDEMLELVLFALEDLRNSLKEQGSNLMIRFGSAENVITELVKEVKATDVFVEEEVEYEMRQIVGVVKDTLETSSSLDGNPDIVMWRTPFYDVKNLKDLPASYNDFKKLKLLPTSPLPPVT 206

[Close]

BLAST of g.arboreum_cottongen_reftransV1_0020385 vs. ExPASy TrEMBL
Match: B9ICV0_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0015s14550g PE=4 SV=2)

HSP 1 Score: 188.348 bits (477), Expect = 1.166e-51
Identity = 108/173 (62.43%), Postives = 136/173 (78.61%), Query Frame = -1

Query:    4 CSLSTATDVRSRS-AVLWFKHDLRLDDHPALSAAETHRFVLPLYVFDRRILCRYSXXXXXXXXXXXXXLRNSLKEQGSNLMIRYGCAENVIKELVKEVKATDVFIEEEVEYEMRQLIGVVKKTLETSSSLDWNLDIVMWRTPFYDVKNLKELPASYNDFKEQKLLPTSPLLPA 519
            CSLS +    + S A+LWFK DLRLDDHP L  A     +LPLYVFD RIL RY+D+ LEL+LFALEDLR SLK+QGSNL+IR+G AENVIKELV EVKAT+VF E EVEY +R++I VV++TL    S D + +IV+W+TPFYD+KNLK+ PASY++F++ +L  TSPLLP+
Sbjct:   32 CSLSVSKTSNATSPAILWFKQDLRLDDHPGLLQASKFPALLPLYVFDHRILSRYNDEKLELVLFALEDLRKSLKKQGSNLIIRFGNAENVIKELVLEVKATNVFAEVEVEYHLREIIHVVEETLVRMPSFDRSPEIVLWQTPFYDIKNLKDFPASYDEFEKLQLAVTSPLLPS 204

[Close]

BLAST of g.arboreum_cottongen_reftransV1_0020385 vs. ExPASy TrEMBL
Match: A0A067FGZ8_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g005554mg PE=4 SV=1)

HSP 1 Score: 183.726 bits (465), Expect = 1.370e-51
Identity = 104/178 (58.43%), Postives = 135/178 (75.84%), Query Frame = -1

Query:    1 VCSLS----TATDVRSRSAVLWFKHDLRLDDHPALSAAETHRFVLPLYVFDRRILCRYSXXXXXXXXXXXXXLRNSLKEQGSNLMIRYGCAENVIKELVKEVKATDVFIEEEVEYEMRQLIGVVKKTLETSSSLDWNLDIVMWRTPFYDVKNLKELPASYNDFKEQKLLPTSPLLPAT 522
            VC +S      +  RS SAV+WFK DLR+DDH  L AA  ++ V+PLYVFD RIL RYS++MLEL++FALEDLR SLKEQGS+LMIR+G  ENVI+ELV+EVKAT VF EEEVEY +RQ++ +V +TL   S +D    I +W+TPFYD+KNL +LP S+N+F++ +   TSP+LP T
Sbjct:   29 VCCVSPTAAATSKGRSGSAVIWFKQDLRVDDHLGLVAASKYQAVVPLYVFDHRILSRYSNEMLELVIFALEDLRKSLKEQGSDLMIRFGRVENVIRELVEEVKATSVFAEEEVEYHLRQMMAIVDETLAKVSLVDGKPKICLWQTPFYDIKNLNDLPVSHNEFRKLQRPLTSPILPPT 206

[Close]

BLAST of g.arboreum_cottongen_reftransV1_0020385 vs. ExPASy TrEMBL
Match: A0A067JQW4_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_26231 PE=4 SV=1)

HSP 1 Score: 187.963 bits (476), Expect = 1.555e-51
Identity = 108/178 (60.67%), Postives = 132/178 (74.16%), Query Frame = -1

Query:    7 CSLSTATDV-------RSRSAVLWFKHDLRLDDHPALSAAETHRFVLPLYVFDRRILCRYSXXXXXXXXXXXXXLRNSLKEQGSNLMIRYGCAENVIKELVKEVKATDVFIEEEVEYEMRQLIGVVKKTLETSSSLDWNLDIVMWRTPFYDVKNLKELPASYNDFKEQKLLPTSPLLP 519
            CSLS  T            SA+LWFK DLR+DDHP L  A     ++PLYVFD RIL  YSDD+LEL+LFALEDLR SL++QGSNLMIR+G AENVI +LV+EVKAT+VF EEEVEY ++  IG+V+++L      D N  IV+WRTPFYD+KNLK  PAS++DFK+ +L PTSPLLP
Sbjct:   31 CSLSAQTPAVTSNGRRSGGSAILWFKQDLRVDDHPGLVEASKFSSLVPLYVFDHRILFGYSDDVLELVLFALEDLRKSLQDQGSNLMIRFGSAENVISDLVQEVKATNVFAEEEVEYHLKMTIGIVEESLVRLPFSDGNPKIVIWRTPFYDIKNLKSFPASHDDFKKLQLAPTSPLLP 208

[Close]

BLAST of g.arboreum_cottongen_reftransV1_0020385 vs. ExPASy TrEMBL
Match: F6HAR5_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_16s0022g01340 PE=4 SV=1)

HSP 1 Score: 187.193 bits (474), Expect = 2.835e-51
Identity = 102/159 (64.15%), Postives = 131/159 (82.39%), Query Frame = -1

Query:    7 AVLWFKHDLRLDDHPAL-SAAETHRFVLPLYVFDRRILCRYSXXXXXXXXXXXXXLRNSLKEQGSNLMIRYGCAENVIKELVKEVKATDVFIEEEVEYEMRQLIGVVKKTLETSSSLDWNLDIVMWRTPFYDVKNLKELPASYNDFKEQKLLPTSPLLP 480
            AVLWFKHDLR+DDHP L +AA  HR V+PLYVFDRRIL R+SD+MLEL+L A+EDLR SLK+QGSNLMIR+G AE  I+E+VKEVKAT +F EEEVE+E+R++I  V++TL T+  L+ + ++VMW TPFYD+K+LK LP  ++DFK+ +L  TSPL P
Sbjct:   46 AVLWFKHDLRIDDHPGLVAAASRHRTVIPLYVFDRRILSRFSDEMLELVLVAMEDLRESLKDQGSNLMIRFGSAEKTIREIVKEVKATTIFAEEEVEHELRKMIDTVQETLATAPLLERSPEVVMWHTPFYDIKDLKYLPPLHHDFKKLQLPITSPLGP 204

[Close]

BLAST of g.arboreum_cottongen_reftransV1_0020385 vs. ExPASy TrEMBL
Match: V4SDA8_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10004462mg PE=4 SV=1)

HSP 1 Score: 184.111 bits (466), Expect = 1.129e-50
Identity = 104/178 (58.43%), Postives = 135/178 (75.84%), Query Frame = -1

Query:    1 VCSLS----TATDVRSRSAVLWFKHDLRLDDHPALSAAETHRFVLPLYVFDRRILCRYSXXXXXXXXXXXXXLRNSLKEQGSNLMIRYGCAENVIKELVKEVKATDVFIEEEVEYEMRQLIGVVKKTLETSSSLDWNLDIVMWRTPFYDVKNLKELPASYNDFKEQKLLPTSPLLPAT 522
            VC +S      +  RS SAV+WFK DLR+DDH  L AA  ++ V+PLYVFD RIL RYS++MLEL++FALEDLR SLKEQGS+LMIR+G  ENVI+ELV+EVKAT VF EEEVEY +RQ++ +V +TL   S +D    I +W+TPFYD+KNL +LP S+N+F++ +   TSP+LP T
Sbjct:   29 VCCVSPTAAATSKGRSGSAVIWFKQDLRVDDHLGLVAASKYQAVVPLYVFDHRILSRYSNEMLELVIFALEDLRKSLKEQGSDLMIRFGRVENVIRELVEEVKATSVFAEEEVEYHLRQMMAIVDETLAKVSLVDGKPKICLWQTPFYDIKNLNDLPVSHNEFRKLQRPLTSPILPPT 206

[Close]

BLAST of g.arboreum_cottongen_reftransV1_0020385 vs. ExPASy Swiss-Prot
Match: PHR2_ARATH (Blue-light photoreceptor PHR2 OS=Arabidopsis thaliana GN=PHR2 PE=2 SV=2)

HSP 1 Score: 62.003 bits (149), Expect = 6.444e-10
Identity = 47/162 (29.01%), Postives = 86/162 (53.09%), Query Frame = -1

Query:   31 WFKHDLRLDDHPALSAAETHRF-VLPLYVFDRRILCRYSXXXXXXXX-------XXXXXLRNSLKEQGSNLMIRYGCAENVIKELVKEVKATDVFIEEEVEYEMRQLIGVVKKTLETSSSLDWNLDI-VMWRTPFYDVKNL----KELPASYNDFKE--QKL 471
            WF++DLR+ D+  L++A      VLP+Y FD R   + S    +           ++ +LR +L+ +GSNL++R G  E V+ EL KE+ A  V+   EV ++  +  G ++  ++     +  +++   W +  Y + +L    ++LP++Y  FK+  QKL
Sbjct:  120 WFRNDLRVHDNECLNSANDECVSVLPVYCFDPRDYGKSSSGFDKTGPFRAQFLIESVSELRKNLQARGSNLVVRVGKPEAVLVELAKEIGADAVYAHREVSHDEVKAEGKIETAMK-----EEGVEVKYFWGSTLYHLDDLPFKIEDLPSNYGAFKDKVQKL 276

The following BLAST results are available for this feature:

BLAST of g.arboreum_cottongen_reftransV1_0020385 vs. ExPASy TrEMBL
BLAST of g.arboreum_cottongen_reftransV1_0020385 vs. ExPASy Swiss-Prot

BLAST of g.arboreum_cottongen_reftransV1_0020385 vs. ExPASy TrEMBL
Analysis Date: 2016-11-15 (Homology Analysis for Gossypium arboreum CottonGen RefTrans V1 vs TrEMBL)
Total hits: 25


Match Name	E-value	Identity	Description
A0A0D2T8M3_GOSRA	1.849e-98	96.55	Uncharacterized protein OS=Gossypium raimondii GN=...	[more]
A0A0D2UBE3_GOSRA	2.344e-98	96.55	Uncharacterized protein OS=Gossypium raimondii GN=...	[more]
A0A0B0N842_GOSAR	2.794e-92	100.00	Uncharacterized protein OS=Gossypium arboreum GN=F...	[more]
A0A061FZF4_THECC	1.064e-70	82.39	Hydrolase, putative isoform 2 OS=Theobroma cacao G...	[more]
A0A061G7A2_THECC	2.334e-70	82.39	Hydrolase, putative isoform 1 OS=Theobroma cacao G...	[more]
B9ICV0_POPTR	1.166e-51	62.43	Uncharacterized protein OS=Populus trichocarpa GN=...	[more]
A0A067FGZ8_CITSI	1.370e-51	58.43	Uncharacterized protein OS=Citrus sinensis GN=CISI...	[more]
A0A067JQW4_JATCU	1.555e-51	60.67	Uncharacterized protein OS=Jatropha curcas GN=JCGZ...	[more]
F6HAR5_VITVI	2.835e-51	64.15	Putative uncharacterized protein OS=Vitis vinifera...	[more]
V4SDA8_9ROSI	1.129e-50	58.43	Uncharacterized protein OS=Citrus clementina GN=CI...	[more]

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BLAST of g.arboreum_cottongen_reftransV1_0020385 vs. ExPASy Swiss-Prot
Analysis Date: 2016-11-15 (Homology Analysis for Gossypium arboreum CottonGen RefTrans V1 vs SwissProt)
Total hits: 1


Match Name	E-value	Identity	Description
PHR2_ARATH	6.444e-10	29.01	Blue-light photoreceptor PHR2 OS=Arabidopsis thali...	[more]

InterPro

Analysis Name: InterProScan analysis for Gossypium arboreum CottonGen RefTrans V1
Date Performed: 2016-11-14


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR006050	DNA photolyase, N-terminal	PFAM	PF00875	DNA_photolyase	coord: 46..157 e-value: 1.2E-24 score: 87.0
IPR006050	DNA photolyase, N-terminal	PROSITE	PS51645	PHR_CRY_ALPHA_BETA	coord: 44..169 score: 26.512
IPR006050	DNA photolyase, N-terminal	SUPERFAMILY	52425	Cryptochrome/photolyase, N-terminal domain	coord: 46..192
IPR014729	Rossmann-like alpha/beta/alpha sandwich fold	GENE3D	3.40.50.620		coord: 41..193 e-value: 2.3E-39 score: 134.4
IPR014133	Cryptochrome DASH	PANTHER	PTHR11455:SF22	CRYPTOCHROME DASH	coord: 42..193
None	No IPR available	PANTHER	PTHR11455	CRYPTOCHROME	coord: 42..193
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE_N_REGION	Signal peptide N-region	coord: 1..1
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE	Signal Peptide	coord: 1..21
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 22..205
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE_C_REGION	Signal peptide C-region	coord: 14..21
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE_H_REGION	Signal peptide H-region	coord: 2..13

Sequences

The following sequences are available for this feature:

contig sequence

contig sequence

>g.arboreum_cottongen_reftransV1_0020385 ID=g.arboreum_cottongen_reftransV1_0020385; Name=g.arboreum_cottongen_reftransV1_0020385; organism=Gossypium arboreum; type=contig; length=693bp
TGTTGCCGGAAGAAGAGGCGAAGTGGGTAGTAACTTCTGTTCTTTAAAGT
CATTATATGATGCAGGCAGCTCCTTCAGATTCTTAACATCATAGAATGGA
GTTCTCCACATGACAATGTCCAGATTCCAATCTAAAGACGAAGACGTTTC
CAATGTCTTCTTGACAACTCCAATCAGCTGACGCATTTCATACTCTACCT
CTTCTTCGATAAAAACATCCGTAGCTTTCACCTCTTTTACAAGCTCTTTA
ATGACATTTTCAGCGCAGCCGTATCGAATCATCAAATTGGAGCCTTGTTC
CTTCAAAGAGTTTCTCAAATCTTCCAATGCGAAGAGAAGTAGCTCGAGCA
TATCATCAGAATAACGACAGAGAATGCGGCGATCGAAGACATAGAGAGGG
AGAACAAAACGGTGCGTTTCAGCGGCAGAGAGAGCGGGGTGATCGTCGAG
GCGGAGGTCGTGTTTGAACCAGAGAACGGCGGAACGAGAGCGTACATCCG
TAGCAGTAGAAAGCGAGCAAACGAAGGAACGGCGACGGCGGATTGAACGA
GAAGAAAAGAAGTGAAATGGCGAGGAAAGGAGTGTGAAAGAGCGAGAGAA
AGAAAGGAGAGCCATGGAGTAACGGAGTCCATCAAAGTTAGAAGAGAAAA
TCTATTATTAGGAAGTAAAAAGGGGAGAGAAAGTGAGAGGGGG

Annotated Terms

The following terms have been associated with this contig:

Vocabulary: **INTERPRO**
Term	Definition
IPR006050	DNA_photolyase_N
IPR014729	Rossmann-like_a/b/a_fold
IPR014133	Cry_DASH

Vocabulary: **Biological Process**
Term	Definition
GO:0006281	DNA repair

Vocabulary: **Molecular Function**
Term	Definition
GO:0003913	DNA photolyase activity

Search form

g.arboreum_cottongen_reftransV1_0020385, g.arboreum_cottongen_reftransV1_0020385 (contig) Gossypium arboreum

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