g.arboreum_cottongen_reftransV1_0022276, g.arboreum_cottongen_reftransV1_0022276 (contig) Gossypium arboreum

Overview
Nameg.arboreum_cottongen_reftransV1_0022276
Unique Nameg.arboreum_cottongen_reftransV1_0022276
Typecontig
OrganismGossypium arboreum (Tree cotton)
Sequence length1185
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Chr10chromosomeg.arboreum_cottongen_reftransV1_0022276:1..1185 .
Chr10:88327924..88329606 +
Homology
BLAST of g.arboreum_cottongen_reftransV1_0022276 vs. ExPASy TrEMBL
Match: A0A0B0NMR7_GOSAR (Two-component response regulator-like APRR7 OS=Gossypium arboreum GN=F383_05323 PE=4 SV=1)

HSP 1 Score: 700.664 bits (1807), Expect = 0.000e+0
Identity = 395/395 (100.00%), Postives = 395/395 (100.00%), Query Frame = 1
Query:    1 SSWTKRAAEGESSQPMSSLNRFPGAPNSTCAQVVHVKHEKRRSPWTCVTQRKECQEQHEQLLDATEGKDLEVRVESNNEWQCGNQCKNSPTHLAEAASKTFDRGWFEHQDENITGKDRIPDIIATLQQAECRASDAPGGPSDVPQLKDGACHGSEEKLSFELTLKRWQGASDGRNAANDGHNVLRHXXXXXXXXXXXXXXXKQALTGNVGSCSPLDHSSVTKKTEIMCTFPSHSNGILLNQSSVGSNNKNDMTTTAKFVGPKPKALVDKSGSISTFKCLHSSSFQPMHGCCICSSQEVSPETVGHDTSLKIMAITDKQCRXXXXXXXXXXXXXXXXXXXXXXETGLRAEHAVMEDXXXXXXXXXXXXXXXEDRVAQRAAALTKFRQKRKERCFEK 1185
            SSWTKRAAEGESSQPMSSLNRFPGAPNSTCAQVVHVKHEKRRSPWTCVTQRKECQEQHEQLLDATEGKDLEVRVESNNEWQCGNQCKNSPTHLAEAASKTFDRGWFEHQDENITGKDRIPDIIATLQQAECRASDAPGGPSDVPQLKDGACHGSEEKLSFELTLKRWQGASDGRNAANDGHNVLRHSDSSAFSKYSTASSAKQALTGNVGSCSPLDHSSVTKKTEIMCTFPSHSNGILLNQSSVGSNNKNDMTTTAKFVGPKPKALVDKSGSISTFKCLHSSSFQPMHGCCICSSQEVSPETVGHDTSLKIMAITDKQCRSSSSVNGSASGSNYGSNGHNGSETGLRAEHAVMEDGNGTASGRSGGSGANEDRVAQRAAALTKFRQKRKERCFEK
Sbjct:  252 SSWTKRAAEGESSQPMSSLNRFPGAPNSTCAQVVHVKHEKRRSPWTCVTQRKECQEQHEQLLDATEGKDLEVRVESNNEWQCGNQCKNSPTHLAEAASKTFDRGWFEHQDENITGKDRIPDIIATLQQAECRASDAPGGPSDVPQLKDGACHGSEEKLSFELTLKRWQGASDGRNAANDGHNVLRHSDSSAFSKYSTASSAKQALTGNVGSCSPLDHSSVTKKTEIMCTFPSHSNGILLNQSSVGSNNKNDMTTTAKFVGPKPKALVDKSGSISTFKCLHSSSFQPMHGCCICSSQEVSPETVGHDTSLKIMAITDKQCRSSSSVNGSASGSNYGSNGHNGSETGLRAEHAVMEDGNGTASGRSGGSGANEDRVAQRAAALTKFRQKRKERCFEK 646          
BLAST of g.arboreum_cottongen_reftransV1_0022276 vs. ExPASy TrEMBL
Match: A0A0D2RXZ6_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_009G103700 PE=4 SV=1)

HSP 1 Score: 671.389 bits (1731), Expect = 0.000e+0
Identity = 379/395 (95.95%), Postives = 383/395 (96.96%), Query Frame = 1
Query:    1 SSWTKRAAEGESSQPMSSLNRFPGAPNSTCAQVVHVKHEKRRSPWTCVTQRKECQEQHEQLLDATEGKDLEVRVESNNEWQCGNQCKNSPTHLAEAASKTFDRGWFEHQDENITGKDRIPDIIATLQQAECRASDAPGGPSDVPQLKDGACHGSEEKLSFELTLKRWQGASDGRNAANDGHNVLRHXXXXXXXXXXXXXXXKQALTGNVGSCSPLDHSSVTKKTEIMCTFPSHSNGILLNQSSVGSNNKNDMTTTAKFVGPKPKALVDKSGSISTFKCLHSSSFQPMHGCCICSSQEVSPETVGHDTSLKIMAITDKQCRXXXXXXXXXXXXXXXXXXXXXXETGLRAEHAVMEDXXXXXXXXXXXXXXXEDRVAQRAAALTKFRQKRKERCFEK 1185
            SSWTKRAAEGESSQ MSSLNRFP APNSTCAQVVHVKHEK  SPWTCVTQRKECQEQHEQL DATEGKDLEVRVESN+EWQCGNQC+NSPTHLAEAASK FDRGWFEHQDENITG DR PDII TLQQAECRASDAPGGPSDVPQLKDGACHGSEEKLSFELTLKRWQGASDGRNAANDGHNVLRHSDSSAFSKYSTASSAKQALTGNVGSCSPLDHSSVTKKTE+MCTFPSHSNGILLNQSSVGSNNKNDMTTTAKFVGPKPKALVDKSGSISTFKCLHSSSFQPMHGCCICSSQEVSPETVGHDTSLKIMAITDKQCRSSSSVNGSAS S YGSNGHNGSETGLRAEHAV EDGNGTASGRSGGSGA+EDRVAQRAAALTKFRQKRKERCFEK
Sbjct:  254 SSWTKRAAEGESSQLMSSLNRFPDAPNSTCAQVVHVKHEKCGSPWTCVTQRKECQEQHEQLFDATEGKDLEVRVESNHEWQCGNQCENSPTHLAEAASKLFDRGWFEHQDENITGNDRTPDIITTLQQAECRASDAPGGPSDVPQLKDGACHGSEEKLSFELTLKRWQGASDGRNAANDGHNVLRHSDSSAFSKYSTASSAKQALTGNVGSCSPLDHSSVTKKTEVMCTFPSHSNGILLNQSSVGSNNKNDMTTTAKFVGPKPKALVDKSGSISTFKCLHSSSFQPMHGCCICSSQEVSPETVGHDTSLKIMAITDKQCRSSSSVNGSASESKYGSNGHNGSETGLRAEHAVTEDGNGTASGRSGGSGADEDRVAQRAAALTKFRQKRKERCFEK 648          
BLAST of g.arboreum_cottongen_reftransV1_0022276 vs. ExPASy TrEMBL
Match: A0A061H066_THECC (Pseudo-response regulator 7, putative isoform 4 OS=Theobroma cacao GN=TCM_041985 PE=4 SV=1)

HSP 1 Score: 383.259 bits (983), Expect = 3.194e-122
Identity = 264/462 (57.14%), Postives = 300/462 (64.94%), Query Frame = 1
Query:    4 SWTKRAAEGESSQPMSSLNRFPGAPNSTCAQVVHVKHEKRRSPWTCVTQRKECQEQHEQLLDATEGKDLEVRVESNNEWQCGNQCKNSPTH--------LAEAASKTFDRGWFEHQDENITGKDRIPDIIATL-----QQAECRASDAPGGPSDVPQLKDGACHGSEEKLSFELTLKRWQGASDGRNAANDGHNVLRHXXXXXXXXXXXXXXXKQALTGNVGSCSPLDHSSVTKKTEIMCTFPSHSNGILLNQSSVGSNNKNDMTTTAKFVGPKPKALVDKSGSISTFKCLHSSSFQPMHGCCICSSQEVSPETV---------------------------------------GHDTSLKIMAITDKQCRX-------------XXXXXXXXXXXXXXXXXXXXXETGLRAEHAVMEDXXXXXXXXXXXXX---XXEDRVAQRAAALTKFRQKRKERCFEK 1185
            SWTKRAAE ESSQPMSS N+ P AP+STCAQVVH+K EK R  W CVT+ KEC+EQH+ + D  EGKD+E+RV+ N E Q G+Q +N PTH        L EA  K FD    EHQ+ENI GKDR P++I+ +     QQAE R SDAP GPS +P++KDG CHGS E  S ELTLKR QGA+D + AAND HNVLRHSD SAFSKYSTAS A Q  TGNVGSCSPLD+SS+T KTE + TF S SNGILLNQ S+GS+NKND+ T AK    KP+AL DK G++S FK  HSSSFQPM    ICSS +V  E                                          HDTSLKIMA+T  QC S             + SVNGSASGSNYGSNG NGS T L AE A+ME  NG A   SG S    A+EDRVAQR AALTKFRQKRKERCFEK
Sbjct:  253 SWTKRAAEAESSQPMSSSNQLPDAPDSTCAQVVHLKPEKCRIQWVCVTKAKECKEQHQLVDDDAEGKDVELRVKRNPELQSGHQHENLPTHQESIKQNGLPEAECKQFDSRQLEHQNENIAGKDRTPNVISAISSCLNQQAESRDSDAPNGPSYIPEVKDGTCHGSGETPSLELTLKRLQGAADSQIAANDEHNVLRHSDLSAFSKYSTASYANQVPTGNVGSCSPLDNSSITMKTETVHTFASQSNGILLNQPSIGSSNKNDVITAAKCASSKPEALNDKCGAMSAFKHSHSSSFQPMQNGHICSSHDVLTEKADDTGFKTAHSQSRSSNQVFHVQHQCHLHQVEKEQHQLQPDHDTSLKIMAVTAPQCGSFNVFEGPSECNIMNYSVNGSASGSNYGSNGPNGSSTALNAEQAIMESENGAAGAMSGRSSGSGADEDRVAQRVAALTKFRQKRKERCFEK 714          
BLAST of g.arboreum_cottongen_reftransV1_0022276 vs. ExPASy TrEMBL
Match: A0A061GXR3_THECC (Pseudo-response regulator 7, putative isoform 1 OS=Theobroma cacao GN=TCM_041985 PE=4 SV=1)

HSP 1 Score: 383.645 bits (984), Expect = 3.379e-122
Identity = 264/462 (57.14%), Postives = 300/462 (64.94%), Query Frame = 1
Query:    4 SWTKRAAEGESSQPMSSLNRFPGAPNSTCAQVVHVKHEKRRSPWTCVTQRKECQEQHEQLLDATEGKDLEVRVESNNEWQCGNQCKNSPTH--------LAEAASKTFDRGWFEHQDENITGKDRIPDIIATL-----QQAECRASDAPGGPSDVPQLKDGACHGSEEKLSFELTLKRWQGASDGRNAANDGHNVLRHXXXXXXXXXXXXXXXKQALTGNVGSCSPLDHSSVTKKTEIMCTFPSHSNGILLNQSSVGSNNKNDMTTTAKFVGPKPKALVDKSGSISTFKCLHSSSFQPMHGCCICSSQEVSPETV---------------------------------------GHDTSLKIMAITDKQCRX-------------XXXXXXXXXXXXXXXXXXXXXETGLRAEHAVMEDXXXXXXXXXXXXX---XXEDRVAQRAAALTKFRQKRKERCFEK 1185
            SWTKRAAE ESSQPMSS N+ P AP+STCAQVVH+K EK R  W CVT+ KEC+EQH+ + D  EGKD+E+RV+ N E Q G+Q +N PTH        L EA  K FD    EHQ+ENI GKDR P++I+ +     QQAE R SDAP GPS +P++KDG CHGS E  S ELTLKR QGA+D + AAND HNVLRHSD SAFSKYSTAS A Q  TGNVGSCSPLD+SS+T KTE + TF S SNGILLNQ S+GS+NKND+ T AK    KP+AL DK G++S FK  HSSSFQPM    ICSS +V  E                                          HDTSLKIMA+T  QC S             + SVNGSASGSNYGSNG NGS T L AE A+ME  NG A   SG S    A+EDRVAQR AALTKFRQKRKERCFEK
Sbjct:  253 SWTKRAAEAESSQPMSSSNQLPDAPDSTCAQVVHLKPEKCRIQWVCVTKAKECKEQHQLVDDDAEGKDVELRVKRNPELQSGHQHENLPTHQESIKQNGLPEAECKQFDSRQLEHQNENIAGKDRTPNVISAISSCLNQQAESRDSDAPNGPSYIPEVKDGTCHGSGETPSLELTLKRLQGAADSQIAANDEHNVLRHSDLSAFSKYSTASYANQVPTGNVGSCSPLDNSSITMKTETVHTFASQSNGILLNQPSIGSSNKNDVITAAKCASSKPEALNDKCGAMSAFKHSHSSSFQPMQNGHICSSHDVLTEKADDTGFKTAHSQSRSSNQVFHVQHQCHLHQVEKEQHQLQPDHDTSLKIMAVTAPQCGSFNVFEGPSECNIMNYSVNGSASGSNYGSNGPNGSSTALNAEQAIMESENGAAGAMSGRSSGSGADEDRVAQRVAALTKFRQKRKERCFEK 714          
BLAST of g.arboreum_cottongen_reftransV1_0022276 vs. ExPASy TrEMBL
Match: A0A061GYF4_THECC (Pseudo-response regulator 7, putative isoform 2 OS=Theobroma cacao GN=TCM_041985 PE=4 SV=1)

HSP 1 Score: 382.874 bits (982), Expect = 3.392e-122
Identity = 264/462 (57.14%), Postives = 300/462 (64.94%), Query Frame = 1
Query:    4 SWTKRAAEGESSQPMSSLNRFPGAPNSTCAQVVHVKHEKRRSPWTCVTQRKECQEQHEQLLDATEGKDLEVRVESNNEWQCGNQCKNSPTH--------LAEAASKTFDRGWFEHQDENITGKDRIPDIIATL-----QQAECRASDAPGGPSDVPQLKDGACHGSEEKLSFELTLKRWQGASDGRNAANDGHNVLRHXXXXXXXXXXXXXXXKQALTGNVGSCSPLDHSSVTKKTEIMCTFPSHSNGILLNQSSVGSNNKNDMTTTAKFVGPKPKALVDKSGSISTFKCLHSSSFQPMHGCCICSSQEVSPETV---------------------------------------GHDTSLKIMAITDKQCRX-------------XXXXXXXXXXXXXXXXXXXXXETGLRAEHAVMEDXXXXXXXXXXXXX---XXEDRVAQRAAALTKFRQKRKERCFEK 1185
            SWTKRAAE ESSQPMSS N+ P AP+STCAQVVH+K EK R  W CVT+ KEC+EQH+ + D  EGKD+E+RV+ N E Q G+Q +N PTH        L EA  K FD    EHQ+ENI GKDR P++I+ +     QQAE R SDAP GPS +P++KDG CHGS E  S ELTLKR QGA+D + AAND HNVLRHSD SAFSKYSTAS A Q  TGNVGSCSPLD+SS+T KTE + TF S SNGILLNQ S+GS+NKND+ T AK    KP+AL DK G++S FK  HSSSFQPM    ICSS +V  E                                          HDTSLKIMA+T  QC S             + SVNGSASGSNYGSNG NGS T L AE A+ME  NG A   SG S    A+EDRVAQR AALTKFRQKRKERCFEK
Sbjct:  253 SWTKRAAEAESSQPMSSSNQLPDAPDSTCAQVVHLKPEKCRIQWVCVTKAKECKEQHQLVDDDAEGKDVELRVKRNPELQSGHQHENLPTHQESIKQNGLPEAECKQFDSRQLEHQNENIAGKDRTPNVISAISSCLNQQAESRDSDAPNGPSYIPEVKDGTCHGSGETPSLELTLKRLQGAADSQIAANDEHNVLRHSDLSAFSKYSTASYANQVPTGNVGSCSPLDNSSITMKTETVHTFASQSNGILLNQPSIGSSNKNDVITAAKCASSKPEALNDKCGAMSAFKHSHSSSFQPMQNGHICSSHDVLTEKADDTGFKTAHSQSRSSNQVFHVQHQCHLHQVEKEQHQLQPDHDTSLKIMAVTAPQCGSFNVFEGPSECNIMNYSVNGSASGSNYGSNGPNGSSTALNAEQAIMESENGAAGAMSGRSSGSGADEDRVAQRVAALTKFRQKRKERCFEK 714          
BLAST of g.arboreum_cottongen_reftransV1_0022276 vs. ExPASy TrEMBL
Match: V4SLI5_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10027794mg PE=4 SV=1)

HSP 1 Score: 223.016 bits (567), Expect = 6.017e-62
Identity = 153/316 (48.42%), Postives = 186/316 (58.86%), Query Frame = 1
Query:    1 SSWTKRAAEGESSQPMSSLNRFPGAPNSTCAQVVHVKHEKRRSPWTCVTQRKECQEQHEQLLDATEGKDLEVRVESNNEWQCGNQCKNSPTH--------LAEAASKTFDRGWFEHQDENITGKDRIPDIIATLQQA-------ECRASDAPGGPSDVPQLKDGACHGSEEKLSFELTLKRWQGASDGRNAANDGHNVLRHXXXXXXXXXXXXXXXKQALTGNVGSCSPLDHSSVTKKTEIMCTFPSHSNGILLNQSSVGSNNKNDMTTTAKFVGPKPKALVDKSGSISTFKCLHSSSFQPMHGCCICSSQEVSPE 903
            SSWTK+AAE +S QP+S   R+  A +S CAQV+H K E   + W  + + K+  EQ EQ       K LE++V  N + +C  Q +   T         L E  SK FD    E  +ENI GK R      +   A       E R  D P GPSD+  +K+  C         ELTLKR QG  D ++AAN+  NVLRHS  SAFSKY+TASSA Q LTGNVGSCSPLD+SSV  KTE M  FPSHSNG  LN+ S GS+N NDM +TAK+V  KP+AL DKS SIS FK  HSS+FQ +     CSSQ+V PE
Sbjct:  103 SSWTKKAAEVDSPQPISP--RYQSADDSICAQVIHTKPESFSNGWVHLNEPKDGLEQDEQPDGVAMHKGLEMQVSENADLKCDCQHEKKSTQQTSKKKIKLPEVDSKPFDNKQLEVDNENICGKRRDQATSTSSANANHANPHAEIRDFDTPSGPSDISLVKETPC--------LELTLKRMQGVEDDQSAANEDCNVLRHSIFSAFSKYNTASSANQGLTGNVGSCSPLDNSSVAMKTETMQNFPSHSNGTPLNRQSNGSSNNNDMASTAKYVTLKPEALNDKSESISAFKPFHSSAFQALQNSRSCSSQQVLPE 408          
BLAST of g.arboreum_cottongen_reftransV1_0022276 vs. ExPASy TrEMBL
Match: V4SGG6_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10027794mg PE=4 SV=1)

HSP 1 Score: 212.616 bits (540), Expect = 8.084e-58
Identity = 149/327 (45.57%), Postives = 182/327 (55.66%), Query Frame = 1
Query:    1 SSWTKRAAEGESSQPMSSLNRFPGAPNSTCAQVVHVKHEKRRSPWTCVTQRKECQEQHEQLLDATEGKDLEVRVESNNEWQCGNQCKNSPTH--------LAEAASKTFDRGWFEHQDENITGKDRIPDIIATLQ-------QAECRASDAPGGPSDVPQLKDGACHGSEEKLSFELTLKRWQGASDGRNAANDGHNVLRHXXXXXXXXXXXX-----------XXXKQALTGNVGSCSPLDHSSVTKKTEIMCTFPSHSNGILLNQSSVGSNNKNDMTTTAKFVGPKPKALVDKSGSISTFKCLHSSSFQPMHGCCICSSQEVSPE 903
            SSWTK+AAE +S QP+S   R+  A +S CAQV+H K E   + W  + + K+  EQ EQ       K LE++V  N + +C  Q +   T         L E  SK FD    E  +ENI GK R      +          AE R  D P GPSD+  +K+  C         ELTLKR QG  D ++AAN+  NVLRHS  SAFSKY              +S  Q LTGNVGSCSPLD+SSV  KTE M  FPSHSNG  LN+ S GS+N NDM +TAK+V  KP+AL DKS SIS FK  HSS+FQ +     CSSQ+V PE
Sbjct:  256 SSWTKKAAEVDSPQPISP--RYQSADDSICAQVIHTKPESFSNGWVHLNEPKDGLEQDEQPDGVAMHKGLEMQVSENADLKCDCQHEKKSTQQTSKKKIKLPEVDSKPFDNKQLEVDNENICGKRRDQATSTSSANANHANPHAEIRDFDTPSGPSDISLVKETPC--------LELTLKRMQGVEDDQSAANEDCNVLRHSIFSAFSKYDLNLKALNFRSNSCTSVIQGLTGNVGSCSPLDNSSVAMKTETMQNFPSHSNGTPLNRQSNGSSNNNDMASTAKYVTLKPEALNDKSESISAFKPFHSSAFQALQNSRSCSSQQVLPE 572          
BLAST of g.arboreum_cottongen_reftransV1_0022276 vs. ExPASy TrEMBL
Match: B9T0R7_RICCO (Sensory transduction histidine kinase, putative OS=Ricinus communis GN=RCOM_1441020 PE=4 SV=1)

HSP 1 Score: 202.216 bits (513), Expect = 2.651e-54
Identity = 150/308 (48.70%), Postives = 184/308 (59.74%), Query Frame = 1
Query:    1 SSWTKRAAEGESSQPMSSLNRFPGAPNSTCAQVVHVKHEKRRSPWTCVTQRKECQEQHEQLLDATEGKDLEVRVESNNEWQCGNQCKN---SPT-----HLAEAASKTFDRGWFEHQDENITGK--DRIPDIIAT-LQQAECRASDAPGGPS---DVPQLKDGACHGSEEKLSFELTLKRWQGASDGRNAANDGHNVLRHXXXXXXXXXXXXXXXKQALTGNVGSCSPLDHSSVTKKTEIMCTFPSHSNGILLNQSSVGSNNKNDMTTTAKFVGPKPKALVDKSGSISTFKCLHSSSFQPMHGCCICS 882
            SSWTKRAA+ +S +PMSS  +   AP+STCAQV+H K E   + W  VT  K  QE+ ++  D   GKDLE+ V SN + +   Q +N    PT      ++E  SK  + G  EH  EN+  K  D+ P + +T    A  R      G S   D+ QLKD AC  S E  SFEL+LKR +G  D  NAA+D  NVLRHSD SAFSKY+  SSA Q  T N GSCSPLD+SSV  KTE     P H +G +LNQ S GS+N NDM +TAK V PKP+A  DKS S STFK  HSS+FQP+     CS
Sbjct:  254 SSWTKRAADIDSPRPMSSAYQMADAPDSTCAQVIHTKPETFGNIWVHVTDTKGLQERDDKHDDFAMGKDLEIGVSSNLDTRHDCQLENLSPRPTSKRQQKISEVDSKPLENGMLEHDGENLFTKLRDQTPQLASTNADSANPRIEIKKVGTSNRPDISQLKDKACCDSGELPSFELSLKRLRGVGDDGNAADDDRNVLRHSDLSAFSKYNNGSSANQGPTENGGSCSPLDNSSVAMKTETTHNIPFHLSGTVLNQQSNGSSNNNDMASTAKKVTPKPEAFNDKSESTSTFKSFHSSAFQPVQNGHSCS 561          
BLAST of g.arboreum_cottongen_reftransV1_0022276 vs. ExPASy TrEMBL
Match: W9SAL3_9ROSA (Two-component response regulator-like protein OS=Morus notabilis GN=L484_011184 PE=4 SV=1)

HSP 1 Score: 170.629 bits (431), Expect = 2.002e-43
Identity = 134/300 (44.67%), Postives = 165/300 (55.00%), Query Frame = 1
Query:   16 RAAEGESSQPMSSLNRFPGAPNSTCAQVVHVKHEKRRSPWTCVTQRKECQEQHEQLLDATEGKDLEVRVESNNEWQCGNQCKNS-------PTHLAEAASKTFDRGWFEHQDENITGKDRIPDIIATLQQAECRASDAPGGPSDVPQLKDGACHGSEEKLSFELTLKRWQGASDGRNAANDGHNVLRHXXXXXXXXXXXXXXXKQALTGNVGSCSPLDHSSVTKKTEIMCTFPSHSNGILLNQSSVGSNNKNDMTTTAKFVGPKPKALVDKSGSISTFKCLHSSSFQPMHGCCICSSQEV 894
            RAAE  S  PMS   ++   P+STCAQV+H K EK  + W   T+ KECQE  +Q +     KD+EV V    + QC  Q K S          L E  S+  +    +H  EN+      P++     Q E R    P G SD  Q+K  +  G  E  S ELTLKR +G+ D  +A  D  NVLRHSD SAFSKY+T SSA Q  TGNVGSCSP   SSV   T     FPSHSN    NQ S GS+N ND+ +T K+V PKP+A  DK  S S FK  HSS+FQP+   CIC + +V
Sbjct:  255 RAAEVHSPTPMSPGGQWADTPDSTCAQVIHTKPEKCSNRWVHSTETKECQELGKQFVS----KDVEVGVNGKPDLQCEYQQKLSFPSTSKRQNKLPEVDSQQRE---VDHNGENLYSS---PNVNCNKPQCEGRIFGTPSGTSDGLQIKGNSDSG--ELPSLELTLKRLRGSGDVGSATLDDCNVLRHSDLSAFSKYNTPSSANQDPTGNVGSCSPFGSSSVAPNTG--HNFPSHSNSTPPNQQSNGSSNNNDLASTNKYVAPKPEAFNDKPESTSGFKSSHSSAFQPVQSGCICLAPQV 540          
BLAST of g.arboreum_cottongen_reftransV1_0022276 vs. ExPASy TrEMBL
Match: A0A061FN21_THECC (Pseudo response regulator, putative isoform 8 (Fragment) OS=Theobroma cacao GN=TCM_043038 PE=4 SV=1)

HSP 1 Score: 167.933 bits (424), Expect = 1.387e-42
Identity = 155/423 (36.64%), Postives = 214/423 (50.59%), Query Frame = 1
Query:    1 SSWTKRAAEGESSQPMSSLNRFPGAPNSTCAQVVHVKHEKRRSPWTCVTQRKECQEQHEQLLDATEGKDLEVRVESNNEWQCGNQCKNSPTHLA------------EAASKTFDRGWFEHQDENITG--KDRIPDIIATLQ-----QAECRASDAPGGPSDVPQLKDGACHGSEEKLSFELTLKRWQGASDGRNAANDGHNVLRHXXXXXXXXXXXXXXXKQALTGNVGSCSPLDHSSVTKKTEIMCTFPSHSNGILLNQSSVGSNNKNDMTTTAKFVGPKPKALVDKSGSISTFKCLH-SSSFQPM---HGCCICSSQEVSPETVGHDTS----LKIMAITDKQCRXXXXXXXXXXXXXXXXXXXXXXETGLRAEHAVMEDXXXXXXXXXXXXXXXE-DRVAQRAAALTKFRQKRKERCFEK 1185
            SSWTKRA E +SSQP+S  ++    P+STCAQV+H +HE     W  VT  +E  E   +L +   GKDLE+ V      Q  +  +   T++A            +   +  ++   E   E   G  +++  D+I  +        E    D P G   V   K+   + ++E    EL+LKR +   D   +A++  NVLRHSD SAFS+Y++ S+A QA TGNVGSCSPLD+SS   KT+ M  F S SN I   Q S GS+N NDM +T      KP  L DK    ++ K  H SS+FQP+   HG  +    + +P+    + S    ++  A      RS+S  N  ++G N  S   N     L +E+ V   G       SGG    + +R AQR AAL KFRQKRKERCFEK
Sbjct:  259 SSWTKRAVEVDSSQPISPWDQLADPPHSTCAQVIHSRHEVLGDSWVPVTATREYDELDNELENVVMGKDLEIGVPKITASQLEDPSEKVMTNIAGVNKDKLSAINPKKDDEKLEKAQLELNSEKSGGDLRNQAADLIGVITNNTEPHIESAVFDIPNGLPKVSDAKEKVNYDTKEMPFLELSLKRLRDVGDTGTSAHE-RNVLRHSDLSAFSRYNSGSTANQAPTGNVGSCSPLDNSSEAVKTDSMKNFQSTSNSIPPKQQSNGSSNNNDMGSTTNNAFSKPAVLSDKPAPKTSAKSFHPSSAFQPVQSGHGSALQPVAQAAPQCGSSNLSSLPHVEGNAANHSLTRSASGSNHGSNGQNGSSTVLNTRGMNLESENGVPGKGGAGGGIGSGGRNVVDQNRFAQREAALNKFRQKRKERCFEK 680          
BLAST of g.arboreum_cottongen_reftransV1_0022276 vs. ExPASy Swiss-Prot
Match: PRR37_ORYSI (Two-component response regulator-like PRR37 OS=Oryza sativa subsp. indica GN=PRR37 PE=2 SV=2)

HSP 1 Score: 105.916 bits (263), Expect = 2.626e-23
Identity = 108/301 (35.88%), Postives = 151/301 (50.17%), Query Frame = 1
Query:    1 SSWTKRAAEGESSQPMSSLNRFPGAPNSTCAQVVHVKHEKRRSPWTCVTQRKECQEQHEQLLDATEGKDLEVRVESNNEWQCGNQCKNSPTHLAEAASKTFDRGWFEHQD-------ENITGKD-RIPDIIATLQ-----QAECRASDAPGGPSDVPQLKDGACHGSEEKLSFELTLKRWQGASDGRNAANDGH-NVLRHXXXXXXXXXXXXXXXKQALTGNVGSCSPLDHSSVTKKTEIMCTFPSHSNGILLNQSSVGSNNKNDMTTTAKFVGPKPKALVDKSGSISTFKCL-HSSSFQP 858
            SSWTKRA E +S Q MS  ++    P+STCAQV+H+K +   + W   T  K  ++Q E   D  +GKDLE+    N         ++SP     +   T  R  +  Q+       EN+     R  D+I ++      Q   RA++AP   S VP+ KD   +      S EL+LKR +   D  NA  +   NVLR SD SAF++Y T  ++ Q  TG VGSCSP D+ S   KT+      S+S+   + Q S GS+N NDM +T K V  KP    ++  S S  K   H+S+F P
Sbjct:  245 SSWTKRAVEIDSPQAMSP-DQLADPPDSTCAQVIHLKSDICSNRWLPCTSNKNSKKQKE-TNDDFKGKDLEIGSPRN----LNTAYQSSPNE--RSIKPTDRRNEYPLQNNSKEAAMENLEESSVRAADLIGSMAKNMDAQQAARATNAPNCSSKVPEGKDK--NRDNIMPSLELSLKRSRSTGDDANAIQEEQRNVLRRSDLSAFTRYHTPVASNQGGTGFVGSCSPHDNISEAMKTDSAYNMKSNSDAAPIKQGSNGSSNNNDMGSTTKNVVTKPSTNKERVMSPSAVKANGHTSAFHP 535          
BLAST of g.arboreum_cottongen_reftransV1_0022276 vs. ExPASy Swiss-Prot
Match: PRR37_ORYSJ (Two-component response regulator-like PRR37 OS=Oryza sativa subsp. japonica GN=PRR37 PE=2 SV=1)

HSP 1 Score: 96.2857 bits (238), Expect = 3.446e-20
Identity = 106/307 (34.53%), Postives = 150/307 (48.86%), Query Frame = 1
Query:    1 SSWTKRAAEGESSQPMSSLNRFPGAPNSTCAQVVHVKHEKRRSPWTCVTQRKECQEQHEQLLDATEGKDLEVRVESNNEWQCGNQCKNSPTHLAEAASKTFDRGWFEHQDENITGKDRIPDIIATLQQAECRASD-------------------APGGPSDVPQLKDGACHGSEEKLSFELTLKRWQGASDGRNAANDGH-NVLRHXXXXXXXXXXXXXXXKQALTGNVGSCSPLDHSSVTKKTEIMCTFPSHSNGILLNQSSVGSNNKNDMTTTAKFVGPKPKALVDKSGSISTFKCL-HSSSFQP 858
            SSWTKRA E +S Q MS  ++    P+STCAQV+H+K +   + W   T  K  ++Q E   D  +GKDLE+    N         ++SP    E + K  DR     ++E     +     +  L+++  RA+D                   AP   S VP+ KD   +      S EL+LKR +   DG NA  +   NVLR SD SAF++Y T  ++ Q  TG +GSCS  D+SS   KT+      S+S+   + Q S GS+N NDM +T K V  KP    ++  S S  K   H+S+F P
Sbjct:  245 SSWTKRAVEIDSPQAMSP-DQLADPPDSTCAQVIHLKSDICSNRWLPCTSNKNSKKQKE-TNDDFKGKDLEIGSPRN----LNTAYQSSPN---ERSIKPTDR-----RNEYPLQNNSKEAAMENLEESSVRAADLIGSMAKNMDAQQAARAANAPNCSSKVPEGKDK--NRDNIMPSLELSLKRSRSTGDGANAIQEEQRNVLRRSDLSAFTRYHTPVASNQGGTGFMGSCSLHDNSSEAMKTDSAYNMKSNSDAAPIKQGSNGSSNNNDMGSTTKNVVTKPSTNKERVMSPSAVKANGHTSAFHP 535          
BLAST of g.arboreum_cottongen_reftransV1_0022276 vs. ExPASy Swiss-Prot
Match: PRR73_ORYSI (Two-component response regulator-like PRR73 OS=Oryza sativa subsp. indica GN=PRR73 PE=2 SV=2)

HSP 1 Score: 86.6557 bits (213), Expect = 5.114e-17
Identity = 99/302 (32.78%), Postives = 149/302 (49.34%), Query Frame = 1
Query:    1 SSWTKRAAEGESSQPMSSLNRFPGAPNSTCAQVVHVKHEKRRSPWTCVTQRKECQEQHEQLLDATEGKDLEVRVESNN--EWQCG-NQCKNSPTH-----LAEAASKTFDRGWFEHQDENITGKDRIPDIIATLQQAE-----CRASDAPGGPSDVPQLKDGACHGSEEKLSFELTLKRWQGASDGRNAANDGHNVLRHXXXXXXXXXXXXXXXKQALTGNVGSCSPLDHSSVTKKTEIMCTFPSHSNGILLNQSSVGSNNKNDMTTTAKFVGPKPKALVDKSGSISTFKCL-HSSSFQPMH 864
            SSWTKRA E +S Q MS  ++    P+STCAQV+H   E   + W   T  K   ++H++  D + GK LE+    N+  E+Q    +   +PT      L   +  T +      Q+E  T   +  D+I+++ ++       R ++AP   S VP   D       +  S EL LKR +  +      +D  N+L+ SD SAF++Y T  ++ Q   G  GSCSP D+SS   KT+  C   S+S+   + Q S GS+N NDM ++ K    KP +   K  S S  K   H+S+F P+ 
Sbjct:  270 SSWTKRAVEIDSPQQMSP-DQPSDLPDSTCAQVIHPTSEICSNRW-LPTANKRSGKKHKENNDDSMGKYLEIGAPRNSSMEYQSSPREMSVNPTEKQHETLMPQSKTTRETDSRNTQNEPTT---QTVDLISSIARSTDDKQVVRINNAPDCSSKVPDGNDKNRDSLIDMTSEELGLKRLK-TTGSATEIHDERNILKRSDLSAFTRYHTTVASNQGGAGFGGSCSPQDNSSEALKTDSNCKVKSNSDAAEIKQGSNGSSNNNDMGSSTKNAITKPSSNRGKVISPSAVKATQHTSAFHPVQ 565          
BLAST of g.arboreum_cottongen_reftransV1_0022276 vs. ExPASy Swiss-Prot
Match: PRR73_ORYSJ (Two-component response regulator-like PRR73 OS=Oryza sativa subsp. japonica GN=PRR73 PE=2 SV=1)

HSP 1 Score: 86.6557 bits (213), Expect = 6.141e-17
Identity = 99/302 (32.78%), Postives = 149/302 (49.34%), Query Frame = 1
Query:    1 SSWTKRAAEGESSQPMSSLNRFPGAPNSTCAQVVHVKHEKRRSPWTCVTQRKECQEQHEQLLDATEGKDLEVRVESNN--EWQCG-NQCKNSPTH-----LAEAASKTFDRGWFEHQDENITGKDRIPDIIATLQQAE-----CRASDAPGGPSDVPQLKDGACHGSEEKLSFELTLKRWQGASDGRNAANDGHNVLRHXXXXXXXXXXXXXXXKQALTGNVGSCSPLDHSSVTKKTEIMCTFPSHSNGILLNQSSVGSNNKNDMTTTAKFVGPKPKALVDKSGSISTFKCL-HSSSFQPMH 864
            SSWTKRA E +S Q MS  ++    P+STCAQV+H   E   + W   T  K   ++H++  D + GK LE+    N+  E+Q    +   +PT      L   +  T +      Q+E  T   +  D+I+++ ++       R ++AP   S VP   D       +  S EL LKR +  +      +D  N+L+ SD SAF++Y T  ++ Q   G  GSCSP D+SS   KT+  C   S+S+   + Q S GS+N NDM ++ K    KP +   K  S S  K   H+S+F P+ 
Sbjct:  270 SSWTKRAVEIDSPQQMSP-DQPSDLPDSTCAQVIHPTSEICSNRW-LPTANKRSGKKHKENNDDSMGKYLEIGAPRNSSMEYQSSPREMSVNPTEKQHETLMPQSKTTRETDSRNTQNEPTT---QTVDLISSIARSTDDKQVVRINNAPDCSSKVPDGNDKNRDSLIDMTSEELGLKRLK-TTGSATEIHDERNILKRSDLSAFTRYHTTVASNQGGAGFGGSCSPQDNSSEALKTDSNCKVKSNSDAAEIKQGSNGSSNNNDMGSSTKNAITKPSSNRGKVISPSAVKATQHTSAFHPVQ 565          
The following BLAST results are available for this feature:
BLAST of g.arboreum_cottongen_reftransV1_0022276 vs. ExPASy TrEMBL
Analysis Date: 2016-11-15 (Homology Analysis for Gossypium arboreum CottonGen RefTrans V1 vs TrEMBL)
Total hits: 25
Match NameE-valueIdentityDescription
A0A0B0NMR7_GOSAR0.000e+0100.00Two-component response regulator-like APRR7 OS=Gos... [more]
A0A0D2RXZ6_GOSRA0.000e+095.95Uncharacterized protein OS=Gossypium raimondii GN=... [more]
A0A061H066_THECC3.194e-12257.14Pseudo-response regulator 7, putative isoform 4 OS... [more]
A0A061GXR3_THECC3.379e-12257.14Pseudo-response regulator 7, putative isoform 1 OS... [more]
A0A061GYF4_THECC3.392e-12257.14Pseudo-response regulator 7, putative isoform 2 OS... [more]
V4SLI5_9ROSI6.017e-6248.42Uncharacterized protein OS=Citrus clementina GN=CI... [more]
V4SGG6_9ROSI8.084e-5845.57Uncharacterized protein OS=Citrus clementina GN=CI... [more]
B9T0R7_RICCO2.651e-5448.70Sensory transduction histidine kinase, putative OS... [more]
W9SAL3_9ROSA2.002e-4344.67Two-component response regulator-like protein OS=M... [more]
A0A061FN21_THECC1.387e-4236.64Pseudo response regulator, putative isoform 8 (Fra... [more]

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BLAST of g.arboreum_cottongen_reftransV1_0022276 vs. ExPASy Swiss-Prot
Analysis Date: 2016-11-15 (Homology Analysis for Gossypium arboreum CottonGen RefTrans V1 vs SwissProt)
Total hits: 4
Match NameE-valueIdentityDescription
PRR37_ORYSI2.626e-2335.88Two-component response regulator-like PRR37 OS=Ory... [more]
PRR37_ORYSJ3.446e-2034.53Two-component response regulator-like PRR37 OS=Ory... [more]
PRR73_ORYSI5.114e-1732.78Two-component response regulator-like PRR73 OS=Ory... [more]
PRR73_ORYSJ6.141e-1732.78Two-component response regulator-like PRR73 OS=Ory... [more]
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Sequences
The following sequences are available for this feature:

contig sequence

>g.arboreum_cottongen_reftransV1_0022276 ID=g.arboreum_cottongen_reftransV1_0022276; Name=g.arboreum_cottongen_reftransV1_0022276; organism=Gossypium arboreum; type=contig; length=1185bp
AGTTCATGGACAAAAAGGGCAGCTGAAGGTGAGAGTTCTCAGCCGATGTC
TTCCTTAAATCGATTTCCTGGTGCTCCCAATAGCACTTGTGCCCAGGTGG
TTCATGTGAAGCATGAAAAACGTAGGAGCCCATGGACATGTGTTACTCAG
AGAAAAGAATGCCAAGAACAGCATGAACAACTTCTTGATGCCACTGAGGG
AAAGGACTTAGAAGTAAGAGTTGAAAGCAATAATGAATGGCAATGTGGCA
ATCAATGCAAAAATTCACCTACTCACCTGGCAGAAGCAGCCTCTAAGACA
TTTGACAGGGGATGGTTTGAGCACCAGGATGAGAACATTACTGGCAAGGA
TCGAATCCCTGATATAATTGCCACATTACAACAAGCTGAATGTAGAGCAT
CTGATGCTCCAGGCGGCCCTTCTGATGTCCCACAACTTAAAGATGGAGCT
TGCCATGGATCTGAAGAAAAGCTATCCTTTGAACTGACTCTTAAGAGGTG
GCAAGGAGCATCAGATGGTAGAAATGCTGCAAATGATGGGCATAATGTTT
TGAGACATTCTGATTCATCAGCTTTCTCAAAATACAGTACTGCATCTTCA
GCTAAGCAGGCTCTCACAGGGAATGTAGGAAGCTGTTCTCCACTTGATCA
TAGTTCTGTCACAAAGAAGACTGAAATAATGTGCACTTTTCCATCACATT
CCAATGGTATTCTTTTGAATCAGTCATCAGTAGGAAGCAACAACAAAAAT
GATATGACTACTACTGCTAAATTTGTCGGCCCAAAGCCAAAAGCTTTGGT
TGACAAGTCTGGGTCCATTTCAACATTTAAATGCCTTCACTCTTCTTCCT
TCCAACCAATGCATGGATGTTGTATTTGTTCATCTCAGGAAGTGTCACCT
GAAACGGTTGGTCATGATACCTCGCTGAAGATCATGGCAATAACTGATAA
ACAATGTAGATCATCCAGTAGTGTAAATGGGAGTGCCTCCGGGAGCAACT
ATGGTAGCAATGGACATAATGGGAGTGAAACCGGTTTACGTGCTGAACAT
GCAGTCATGGAAGATGGCAATGGGACAGCGAGTGGGAGAAGTGGTGGTAG
TGGCGCAAATGAAGACCGGGTTGCACAGAGAGCGGCTGCCTTGACCAAAT
TTCGCCAGAAAAGGAAAGAAAGATGTTTTGAAAAG
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