g.arboreum_cottongen_reftransV1_0022276, g.arboreum_cottongen_reftransV1_0022276 (contig) Gossypium arboreum
Overview
Alignments
The following features are aligned
Analyses
This contig is derived from or has results from the following analyses
Homology
BLAST of g.arboreum_cottongen_reftransV1_0022276 vs. ExPASy TrEMBL
Match: A0A0B0NMR7_GOSAR (Two-component response regulator-like APRR7 OS=Gossypium arboreum GN=F383_05323 PE=4 SV=1) HSP 1 Score: 700.664 bits (1807), Expect = 0.000e+0 Identity = 395/395 (100.00%), Postives = 395/395 (100.00%), Query Frame = 1 Query: 1 SSWTKRAAEGESSQPMSSLNRFPGAPNSTCAQVVHVKHEKRRSPWTCVTQRKECQEQHEQLLDATEGKDLEVRVESNNEWQCGNQCKNSPTHLAEAASKTFDRGWFEHQDENITGKDRIPDIIATLQQAECRASDAPGGPSDVPQLKDGACHGSEEKLSFELTLKRWQGASDGRNAANDGHNVLRHXXXXXXXXXXXXXXXKQALTGNVGSCSPLDHSSVTKKTEIMCTFPSHSNGILLNQSSVGSNNKNDMTTTAKFVGPKPKALVDKSGSISTFKCLHSSSFQPMHGCCICSSQEVSPETVGHDTSLKIMAITDKQCRXXXXXXXXXXXXXXXXXXXXXXETGLRAEHAVMEDXXXXXXXXXXXXXXXEDRVAQRAAALTKFRQKRKERCFEK 1185 SSWTKRAAEGESSQPMSSLNRFPGAPNSTCAQVVHVKHEKRRSPWTCVTQRKECQEQHEQLLDATEGKDLEVRVESNNEWQCGNQCKNSPTHLAEAASKTFDRGWFEHQDENITGKDRIPDIIATLQQAECRASDAPGGPSDVPQLKDGACHGSEEKLSFELTLKRWQGASDGRNAANDGHNVLRHSDSSAFSKYSTASSAKQALTGNVGSCSPLDHSSVTKKTEIMCTFPSHSNGILLNQSSVGSNNKNDMTTTAKFVGPKPKALVDKSGSISTFKCLHSSSFQPMHGCCICSSQEVSPETVGHDTSLKIMAITDKQCRSSSSVNGSASGSNYGSNGHNGSETGLRAEHAVMEDGNGTASGRSGGSGANEDRVAQRAAALTKFRQKRKERCFEK Sbjct: 252 SSWTKRAAEGESSQPMSSLNRFPGAPNSTCAQVVHVKHEKRRSPWTCVTQRKECQEQHEQLLDATEGKDLEVRVESNNEWQCGNQCKNSPTHLAEAASKTFDRGWFEHQDENITGKDRIPDIIATLQQAECRASDAPGGPSDVPQLKDGACHGSEEKLSFELTLKRWQGASDGRNAANDGHNVLRHSDSSAFSKYSTASSAKQALTGNVGSCSPLDHSSVTKKTEIMCTFPSHSNGILLNQSSVGSNNKNDMTTTAKFVGPKPKALVDKSGSISTFKCLHSSSFQPMHGCCICSSQEVSPETVGHDTSLKIMAITDKQCRSSSSVNGSASGSNYGSNGHNGSETGLRAEHAVMEDGNGTASGRSGGSGANEDRVAQRAAALTKFRQKRKERCFEK 646
BLAST of g.arboreum_cottongen_reftransV1_0022276 vs. ExPASy TrEMBL
Match: A0A0D2RXZ6_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_009G103700 PE=4 SV=1) HSP 1 Score: 671.389 bits (1731), Expect = 0.000e+0 Identity = 379/395 (95.95%), Postives = 383/395 (96.96%), Query Frame = 1 Query: 1 SSWTKRAAEGESSQPMSSLNRFPGAPNSTCAQVVHVKHEKRRSPWTCVTQRKECQEQHEQLLDATEGKDLEVRVESNNEWQCGNQCKNSPTHLAEAASKTFDRGWFEHQDENITGKDRIPDIIATLQQAECRASDAPGGPSDVPQLKDGACHGSEEKLSFELTLKRWQGASDGRNAANDGHNVLRHXXXXXXXXXXXXXXXKQALTGNVGSCSPLDHSSVTKKTEIMCTFPSHSNGILLNQSSVGSNNKNDMTTTAKFVGPKPKALVDKSGSISTFKCLHSSSFQPMHGCCICSSQEVSPETVGHDTSLKIMAITDKQCRXXXXXXXXXXXXXXXXXXXXXXETGLRAEHAVMEDXXXXXXXXXXXXXXXEDRVAQRAAALTKFRQKRKERCFEK 1185 SSWTKRAAEGESSQ MSSLNRFP APNSTCAQVVHVKHEK SPWTCVTQRKECQEQHEQL DATEGKDLEVRVESN+EWQCGNQC+NSPTHLAEAASK FDRGWFEHQDENITG DR PDII TLQQAECRASDAPGGPSDVPQLKDGACHGSEEKLSFELTLKRWQGASDGRNAANDGHNVLRHSDSSAFSKYSTASSAKQALTGNVGSCSPLDHSSVTKKTE+MCTFPSHSNGILLNQSSVGSNNKNDMTTTAKFVGPKPKALVDKSGSISTFKCLHSSSFQPMHGCCICSSQEVSPETVGHDTSLKIMAITDKQCRSSSSVNGSAS S YGSNGHNGSETGLRAEHAV EDGNGTASGRSGGSGA+EDRVAQRAAALTKFRQKRKERCFEK Sbjct: 254 SSWTKRAAEGESSQLMSSLNRFPDAPNSTCAQVVHVKHEKCGSPWTCVTQRKECQEQHEQLFDATEGKDLEVRVESNHEWQCGNQCENSPTHLAEAASKLFDRGWFEHQDENITGNDRTPDIITTLQQAECRASDAPGGPSDVPQLKDGACHGSEEKLSFELTLKRWQGASDGRNAANDGHNVLRHSDSSAFSKYSTASSAKQALTGNVGSCSPLDHSSVTKKTEVMCTFPSHSNGILLNQSSVGSNNKNDMTTTAKFVGPKPKALVDKSGSISTFKCLHSSSFQPMHGCCICSSQEVSPETVGHDTSLKIMAITDKQCRSSSSVNGSASESKYGSNGHNGSETGLRAEHAVTEDGNGTASGRSGGSGADEDRVAQRAAALTKFRQKRKERCFEK 648
BLAST of g.arboreum_cottongen_reftransV1_0022276 vs. ExPASy TrEMBL
Match: A0A061H066_THECC (Pseudo-response regulator 7, putative isoform 4 OS=Theobroma cacao GN=TCM_041985 PE=4 SV=1) HSP 1 Score: 383.259 bits (983), Expect = 3.194e-122 Identity = 264/462 (57.14%), Postives = 300/462 (64.94%), Query Frame = 1 Query: 4 SWTKRAAEGESSQPMSSLNRFPGAPNSTCAQVVHVKHEKRRSPWTCVTQRKECQEQHEQLLDATEGKDLEVRVESNNEWQCGNQCKNSPTH--------LAEAASKTFDRGWFEHQDENITGKDRIPDIIATL-----QQAECRASDAPGGPSDVPQLKDGACHGSEEKLSFELTLKRWQGASDGRNAANDGHNVLRHXXXXXXXXXXXXXXXKQALTGNVGSCSPLDHSSVTKKTEIMCTFPSHSNGILLNQSSVGSNNKNDMTTTAKFVGPKPKALVDKSGSISTFKCLHSSSFQPMHGCCICSSQEVSPETV---------------------------------------GHDTSLKIMAITDKQCRX-------------XXXXXXXXXXXXXXXXXXXXXETGLRAEHAVMEDXXXXXXXXXXXXX---XXEDRVAQRAAALTKFRQKRKERCFEK 1185 SWTKRAAE ESSQPMSS N+ P AP+STCAQVVH+K EK R W CVT+ KEC+EQH+ + D EGKD+E+RV+ N E Q G+Q +N PTH L EA K FD EHQ+ENI GKDR P++I+ + QQAE R SDAP GPS +P++KDG CHGS E S ELTLKR QGA+D + AAND HNVLRHSD SAFSKYSTAS A Q TGNVGSCSPLD+SS+T KTE + TF S SNGILLNQ S+GS+NKND+ T AK KP+AL DK G++S FK HSSSFQPM ICSS +V E HDTSLKIMA+T QC S + SVNGSASGSNYGSNG NGS T L AE A+ME NG A SG S A+EDRVAQR AALTKFRQKRKERCFEK Sbjct: 253 SWTKRAAEAESSQPMSSSNQLPDAPDSTCAQVVHLKPEKCRIQWVCVTKAKECKEQHQLVDDDAEGKDVELRVKRNPELQSGHQHENLPTHQESIKQNGLPEAECKQFDSRQLEHQNENIAGKDRTPNVISAISSCLNQQAESRDSDAPNGPSYIPEVKDGTCHGSGETPSLELTLKRLQGAADSQIAANDEHNVLRHSDLSAFSKYSTASYANQVPTGNVGSCSPLDNSSITMKTETVHTFASQSNGILLNQPSIGSSNKNDVITAAKCASSKPEALNDKCGAMSAFKHSHSSSFQPMQNGHICSSHDVLTEKADDTGFKTAHSQSRSSNQVFHVQHQCHLHQVEKEQHQLQPDHDTSLKIMAVTAPQCGSFNVFEGPSECNIMNYSVNGSASGSNYGSNGPNGSSTALNAEQAIMESENGAAGAMSGRSSGSGADEDRVAQRVAALTKFRQKRKERCFEK 714
BLAST of g.arboreum_cottongen_reftransV1_0022276 vs. ExPASy TrEMBL
Match: A0A061GXR3_THECC (Pseudo-response regulator 7, putative isoform 1 OS=Theobroma cacao GN=TCM_041985 PE=4 SV=1) HSP 1 Score: 383.645 bits (984), Expect = 3.379e-122 Identity = 264/462 (57.14%), Postives = 300/462 (64.94%), Query Frame = 1 Query: 4 SWTKRAAEGESSQPMSSLNRFPGAPNSTCAQVVHVKHEKRRSPWTCVTQRKECQEQHEQLLDATEGKDLEVRVESNNEWQCGNQCKNSPTH--------LAEAASKTFDRGWFEHQDENITGKDRIPDIIATL-----QQAECRASDAPGGPSDVPQLKDGACHGSEEKLSFELTLKRWQGASDGRNAANDGHNVLRHXXXXXXXXXXXXXXXKQALTGNVGSCSPLDHSSVTKKTEIMCTFPSHSNGILLNQSSVGSNNKNDMTTTAKFVGPKPKALVDKSGSISTFKCLHSSSFQPMHGCCICSSQEVSPETV---------------------------------------GHDTSLKIMAITDKQCRX-------------XXXXXXXXXXXXXXXXXXXXXETGLRAEHAVMEDXXXXXXXXXXXXX---XXEDRVAQRAAALTKFRQKRKERCFEK 1185 SWTKRAAE ESSQPMSS N+ P AP+STCAQVVH+K EK R W CVT+ KEC+EQH+ + D EGKD+E+RV+ N E Q G+Q +N PTH L EA K FD EHQ+ENI GKDR P++I+ + QQAE R SDAP GPS +P++KDG CHGS E S ELTLKR QGA+D + AAND HNVLRHSD SAFSKYSTAS A Q TGNVGSCSPLD+SS+T KTE + TF S SNGILLNQ S+GS+NKND+ T AK KP+AL DK G++S FK HSSSFQPM ICSS +V E HDTSLKIMA+T QC S + SVNGSASGSNYGSNG NGS T L AE A+ME NG A SG S A+EDRVAQR AALTKFRQKRKERCFEK Sbjct: 253 SWTKRAAEAESSQPMSSSNQLPDAPDSTCAQVVHLKPEKCRIQWVCVTKAKECKEQHQLVDDDAEGKDVELRVKRNPELQSGHQHENLPTHQESIKQNGLPEAECKQFDSRQLEHQNENIAGKDRTPNVISAISSCLNQQAESRDSDAPNGPSYIPEVKDGTCHGSGETPSLELTLKRLQGAADSQIAANDEHNVLRHSDLSAFSKYSTASYANQVPTGNVGSCSPLDNSSITMKTETVHTFASQSNGILLNQPSIGSSNKNDVITAAKCASSKPEALNDKCGAMSAFKHSHSSSFQPMQNGHICSSHDVLTEKADDTGFKTAHSQSRSSNQVFHVQHQCHLHQVEKEQHQLQPDHDTSLKIMAVTAPQCGSFNVFEGPSECNIMNYSVNGSASGSNYGSNGPNGSSTALNAEQAIMESENGAAGAMSGRSSGSGADEDRVAQRVAALTKFRQKRKERCFEK 714
BLAST of g.arboreum_cottongen_reftransV1_0022276 vs. ExPASy TrEMBL
Match: A0A061GYF4_THECC (Pseudo-response regulator 7, putative isoform 2 OS=Theobroma cacao GN=TCM_041985 PE=4 SV=1) HSP 1 Score: 382.874 bits (982), Expect = 3.392e-122 Identity = 264/462 (57.14%), Postives = 300/462 (64.94%), Query Frame = 1 Query: 4 SWTKRAAEGESSQPMSSLNRFPGAPNSTCAQVVHVKHEKRRSPWTCVTQRKECQEQHEQLLDATEGKDLEVRVESNNEWQCGNQCKNSPTH--------LAEAASKTFDRGWFEHQDENITGKDRIPDIIATL-----QQAECRASDAPGGPSDVPQLKDGACHGSEEKLSFELTLKRWQGASDGRNAANDGHNVLRHXXXXXXXXXXXXXXXKQALTGNVGSCSPLDHSSVTKKTEIMCTFPSHSNGILLNQSSVGSNNKNDMTTTAKFVGPKPKALVDKSGSISTFKCLHSSSFQPMHGCCICSSQEVSPETV---------------------------------------GHDTSLKIMAITDKQCRX-------------XXXXXXXXXXXXXXXXXXXXXETGLRAEHAVMEDXXXXXXXXXXXXX---XXEDRVAQRAAALTKFRQKRKERCFEK 1185 SWTKRAAE ESSQPMSS N+ P AP+STCAQVVH+K EK R W CVT+ KEC+EQH+ + D EGKD+E+RV+ N E Q G+Q +N PTH L EA K FD EHQ+ENI GKDR P++I+ + QQAE R SDAP GPS +P++KDG CHGS E S ELTLKR QGA+D + AAND HNVLRHSD SAFSKYSTAS A Q TGNVGSCSPLD+SS+T KTE + TF S SNGILLNQ S+GS+NKND+ T AK KP+AL DK G++S FK HSSSFQPM ICSS +V E HDTSLKIMA+T QC S + SVNGSASGSNYGSNG NGS T L AE A+ME NG A SG S A+EDRVAQR AALTKFRQKRKERCFEK Sbjct: 253 SWTKRAAEAESSQPMSSSNQLPDAPDSTCAQVVHLKPEKCRIQWVCVTKAKECKEQHQLVDDDAEGKDVELRVKRNPELQSGHQHENLPTHQESIKQNGLPEAECKQFDSRQLEHQNENIAGKDRTPNVISAISSCLNQQAESRDSDAPNGPSYIPEVKDGTCHGSGETPSLELTLKRLQGAADSQIAANDEHNVLRHSDLSAFSKYSTASYANQVPTGNVGSCSPLDNSSITMKTETVHTFASQSNGILLNQPSIGSSNKNDVITAAKCASSKPEALNDKCGAMSAFKHSHSSSFQPMQNGHICSSHDVLTEKADDTGFKTAHSQSRSSNQVFHVQHQCHLHQVEKEQHQLQPDHDTSLKIMAVTAPQCGSFNVFEGPSECNIMNYSVNGSASGSNYGSNGPNGSSTALNAEQAIMESENGAAGAMSGRSSGSGADEDRVAQRVAALTKFRQKRKERCFEK 714
BLAST of g.arboreum_cottongen_reftransV1_0022276 vs. ExPASy TrEMBL
Match: V4SLI5_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10027794mg PE=4 SV=1) HSP 1 Score: 223.016 bits (567), Expect = 6.017e-62 Identity = 153/316 (48.42%), Postives = 186/316 (58.86%), Query Frame = 1 Query: 1 SSWTKRAAEGESSQPMSSLNRFPGAPNSTCAQVVHVKHEKRRSPWTCVTQRKECQEQHEQLLDATEGKDLEVRVESNNEWQCGNQCKNSPTH--------LAEAASKTFDRGWFEHQDENITGKDRIPDIIATLQQA-------ECRASDAPGGPSDVPQLKDGACHGSEEKLSFELTLKRWQGASDGRNAANDGHNVLRHXXXXXXXXXXXXXXXKQALTGNVGSCSPLDHSSVTKKTEIMCTFPSHSNGILLNQSSVGSNNKNDMTTTAKFVGPKPKALVDKSGSISTFKCLHSSSFQPMHGCCICSSQEVSPE 903 SSWTK+AAE +S QP+S R+ A +S CAQV+H K E + W + + K+ EQ EQ K LE++V N + +C Q + T L E SK FD E +ENI GK R + A E R D P GPSD+ +K+ C ELTLKR QG D ++AAN+ NVLRHS SAFSKY+TASSA Q LTGNVGSCSPLD+SSV KTE M FPSHSNG LN+ S GS+N NDM +TAK+V KP+AL DKS SIS FK HSS+FQ + CSSQ+V PE Sbjct: 103 SSWTKKAAEVDSPQPISP--RYQSADDSICAQVIHTKPESFSNGWVHLNEPKDGLEQDEQPDGVAMHKGLEMQVSENADLKCDCQHEKKSTQQTSKKKIKLPEVDSKPFDNKQLEVDNENICGKRRDQATSTSSANANHANPHAEIRDFDTPSGPSDISLVKETPC--------LELTLKRMQGVEDDQSAANEDCNVLRHSIFSAFSKYNTASSANQGLTGNVGSCSPLDNSSVAMKTETMQNFPSHSNGTPLNRQSNGSSNNNDMASTAKYVTLKPEALNDKSESISAFKPFHSSAFQALQNSRSCSSQQVLPE 408
BLAST of g.arboreum_cottongen_reftransV1_0022276 vs. ExPASy TrEMBL
Match: V4SGG6_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10027794mg PE=4 SV=1) HSP 1 Score: 212.616 bits (540), Expect = 8.084e-58 Identity = 149/327 (45.57%), Postives = 182/327 (55.66%), Query Frame = 1 Query: 1 SSWTKRAAEGESSQPMSSLNRFPGAPNSTCAQVVHVKHEKRRSPWTCVTQRKECQEQHEQLLDATEGKDLEVRVESNNEWQCGNQCKNSPTH--------LAEAASKTFDRGWFEHQDENITGKDRIPDIIATLQ-------QAECRASDAPGGPSDVPQLKDGACHGSEEKLSFELTLKRWQGASDGRNAANDGHNVLRHXXXXXXXXXXXX-----------XXXKQALTGNVGSCSPLDHSSVTKKTEIMCTFPSHSNGILLNQSSVGSNNKNDMTTTAKFVGPKPKALVDKSGSISTFKCLHSSSFQPMHGCCICSSQEVSPE 903 SSWTK+AAE +S QP+S R+ A +S CAQV+H K E + W + + K+ EQ EQ K LE++V N + +C Q + T L E SK FD E +ENI GK R + AE R D P GPSD+ +K+ C ELTLKR QG D ++AAN+ NVLRHS SAFSKY +S Q LTGNVGSCSPLD+SSV KTE M FPSHSNG LN+ S GS+N NDM +TAK+V KP+AL DKS SIS FK HSS+FQ + CSSQ+V PE Sbjct: 256 SSWTKKAAEVDSPQPISP--RYQSADDSICAQVIHTKPESFSNGWVHLNEPKDGLEQDEQPDGVAMHKGLEMQVSENADLKCDCQHEKKSTQQTSKKKIKLPEVDSKPFDNKQLEVDNENICGKRRDQATSTSSANANHANPHAEIRDFDTPSGPSDISLVKETPC--------LELTLKRMQGVEDDQSAANEDCNVLRHSIFSAFSKYDLNLKALNFRSNSCTSVIQGLTGNVGSCSPLDNSSVAMKTETMQNFPSHSNGTPLNRQSNGSSNNNDMASTAKYVTLKPEALNDKSESISAFKPFHSSAFQALQNSRSCSSQQVLPE 572
BLAST of g.arboreum_cottongen_reftransV1_0022276 vs. ExPASy TrEMBL
Match: B9T0R7_RICCO (Sensory transduction histidine kinase, putative OS=Ricinus communis GN=RCOM_1441020 PE=4 SV=1) HSP 1 Score: 202.216 bits (513), Expect = 2.651e-54 Identity = 150/308 (48.70%), Postives = 184/308 (59.74%), Query Frame = 1 Query: 1 SSWTKRAAEGESSQPMSSLNRFPGAPNSTCAQVVHVKHEKRRSPWTCVTQRKECQEQHEQLLDATEGKDLEVRVESNNEWQCGNQCKN---SPT-----HLAEAASKTFDRGWFEHQDENITGK--DRIPDIIAT-LQQAECRASDAPGGPS---DVPQLKDGACHGSEEKLSFELTLKRWQGASDGRNAANDGHNVLRHXXXXXXXXXXXXXXXKQALTGNVGSCSPLDHSSVTKKTEIMCTFPSHSNGILLNQSSVGSNNKNDMTTTAKFVGPKPKALVDKSGSISTFKCLHSSSFQPMHGCCICS 882 SSWTKRAA+ +S +PMSS + AP+STCAQV+H K E + W VT K QE+ ++ D GKDLE+ V SN + + Q +N PT ++E SK + G EH EN+ K D+ P + +T A R G S D+ QLKD AC S E SFEL+LKR +G D NAA+D NVLRHSD SAFSKY+ SSA Q T N GSCSPLD+SSV KTE P H +G +LNQ S GS+N NDM +TAK V PKP+A DKS S STFK HSS+FQP+ CS Sbjct: 254 SSWTKRAADIDSPRPMSSAYQMADAPDSTCAQVIHTKPETFGNIWVHVTDTKGLQERDDKHDDFAMGKDLEIGVSSNLDTRHDCQLENLSPRPTSKRQQKISEVDSKPLENGMLEHDGENLFTKLRDQTPQLASTNADSANPRIEIKKVGTSNRPDISQLKDKACCDSGELPSFELSLKRLRGVGDDGNAADDDRNVLRHSDLSAFSKYNNGSSANQGPTENGGSCSPLDNSSVAMKTETTHNIPFHLSGTVLNQQSNGSSNNNDMASTAKKVTPKPEAFNDKSESTSTFKSFHSSAFQPVQNGHSCS 561
BLAST of g.arboreum_cottongen_reftransV1_0022276 vs. ExPASy TrEMBL
Match: W9SAL3_9ROSA (Two-component response regulator-like protein OS=Morus notabilis GN=L484_011184 PE=4 SV=1) HSP 1 Score: 170.629 bits (431), Expect = 2.002e-43 Identity = 134/300 (44.67%), Postives = 165/300 (55.00%), Query Frame = 1 Query: 16 RAAEGESSQPMSSLNRFPGAPNSTCAQVVHVKHEKRRSPWTCVTQRKECQEQHEQLLDATEGKDLEVRVESNNEWQCGNQCKNS-------PTHLAEAASKTFDRGWFEHQDENITGKDRIPDIIATLQQAECRASDAPGGPSDVPQLKDGACHGSEEKLSFELTLKRWQGASDGRNAANDGHNVLRHXXXXXXXXXXXXXXXKQALTGNVGSCSPLDHSSVTKKTEIMCTFPSHSNGILLNQSSVGSNNKNDMTTTAKFVGPKPKALVDKSGSISTFKCLHSSSFQPMHGCCICSSQEV 894 RAAE S PMS ++ P+STCAQV+H K EK + W T+ KECQE +Q + KD+EV V + QC Q K S L E S+ + +H EN+ P++ Q E R P G SD Q+K + G E S ELTLKR +G+ D +A D NVLRHSD SAFSKY+T SSA Q TGNVGSCSP SSV T FPSHSN NQ S GS+N ND+ +T K+V PKP+A DK S S FK HSS+FQP+ CIC + +V Sbjct: 255 RAAEVHSPTPMSPGGQWADTPDSTCAQVIHTKPEKCSNRWVHSTETKECQELGKQFVS----KDVEVGVNGKPDLQCEYQQKLSFPSTSKRQNKLPEVDSQQRE---VDHNGENLYSS---PNVNCNKPQCEGRIFGTPSGTSDGLQIKGNSDSG--ELPSLELTLKRLRGSGDVGSATLDDCNVLRHSDLSAFSKYNTPSSANQDPTGNVGSCSPFGSSSVAPNTG--HNFPSHSNSTPPNQQSNGSSNNNDLASTNKYVAPKPEAFNDKPESTSGFKSSHSSAFQPVQSGCICLAPQV 540
BLAST of g.arboreum_cottongen_reftransV1_0022276 vs. ExPASy TrEMBL
Match: A0A061FN21_THECC (Pseudo response regulator, putative isoform 8 (Fragment) OS=Theobroma cacao GN=TCM_043038 PE=4 SV=1) HSP 1 Score: 167.933 bits (424), Expect = 1.387e-42 Identity = 155/423 (36.64%), Postives = 214/423 (50.59%), Query Frame = 1 Query: 1 SSWTKRAAEGESSQPMSSLNRFPGAPNSTCAQVVHVKHEKRRSPWTCVTQRKECQEQHEQLLDATEGKDLEVRVESNNEWQCGNQCKNSPTHLA------------EAASKTFDRGWFEHQDENITG--KDRIPDIIATLQ-----QAECRASDAPGGPSDVPQLKDGACHGSEEKLSFELTLKRWQGASDGRNAANDGHNVLRHXXXXXXXXXXXXXXXKQALTGNVGSCSPLDHSSVTKKTEIMCTFPSHSNGILLNQSSVGSNNKNDMTTTAKFVGPKPKALVDKSGSISTFKCLH-SSSFQPM---HGCCICSSQEVSPETVGHDTS----LKIMAITDKQCRXXXXXXXXXXXXXXXXXXXXXXETGLRAEHAVMEDXXXXXXXXXXXXXXXE-DRVAQRAAALTKFRQKRKERCFEK 1185 SSWTKRA E +SSQP+S ++ P+STCAQV+H +HE W VT +E E +L + GKDLE+ V Q + + T++A + + ++ E E G +++ D+I + E D P G V K+ + ++E EL+LKR + D +A++ NVLRHSD SAFS+Y++ S+A QA TGNVGSCSPLD+SS KT+ M F S SN I Q S GS+N NDM +T KP L DK ++ K H SS+FQP+ HG + + +P+ + S ++ A RS+S N ++G N S N L +E+ V G SGG + +R AQR AAL KFRQKRKERCFEK Sbjct: 259 SSWTKRAVEVDSSQPISPWDQLADPPHSTCAQVIHSRHEVLGDSWVPVTATREYDELDNELENVVMGKDLEIGVPKITASQLEDPSEKVMTNIAGVNKDKLSAINPKKDDEKLEKAQLELNSEKSGGDLRNQAADLIGVITNNTEPHIESAVFDIPNGLPKVSDAKEKVNYDTKEMPFLELSLKRLRDVGDTGTSAHE-RNVLRHSDLSAFSRYNSGSTANQAPTGNVGSCSPLDNSSEAVKTDSMKNFQSTSNSIPPKQQSNGSSNNNDMGSTTNNAFSKPAVLSDKPAPKTSAKSFHPSSAFQPVQSGHGSALQPVAQAAPQCGSSNLSSLPHVEGNAANHSLTRSASGSNHGSNGQNGSSTVLNTRGMNLESENGVPGKGGAGGGIGSGGRNVVDQNRFAQREAALNKFRQKRKERCFEK 680
BLAST of g.arboreum_cottongen_reftransV1_0022276 vs. ExPASy Swiss-Prot
Match: PRR37_ORYSI (Two-component response regulator-like PRR37 OS=Oryza sativa subsp. indica GN=PRR37 PE=2 SV=2) HSP 1 Score: 105.916 bits (263), Expect = 2.626e-23 Identity = 108/301 (35.88%), Postives = 151/301 (50.17%), Query Frame = 1 Query: 1 SSWTKRAAEGESSQPMSSLNRFPGAPNSTCAQVVHVKHEKRRSPWTCVTQRKECQEQHEQLLDATEGKDLEVRVESNNEWQCGNQCKNSPTHLAEAASKTFDRGWFEHQD-------ENITGKD-RIPDIIATLQ-----QAECRASDAPGGPSDVPQLKDGACHGSEEKLSFELTLKRWQGASDGRNAANDGH-NVLRHXXXXXXXXXXXXXXXKQALTGNVGSCSPLDHSSVTKKTEIMCTFPSHSNGILLNQSSVGSNNKNDMTTTAKFVGPKPKALVDKSGSISTFKCL-HSSSFQP 858 SSWTKRA E +S Q MS ++ P+STCAQV+H+K + + W T K ++Q E D +GKDLE+ N ++SP + T R + Q+ EN+ R D+I ++ Q RA++AP S VP+ KD + S EL+LKR + D NA + NVLR SD SAF++Y T ++ Q TG VGSCSP D+ S KT+ S+S+ + Q S GS+N NDM +T K V KP ++ S S K H+S+F P Sbjct: 245 SSWTKRAVEIDSPQAMSP-DQLADPPDSTCAQVIHLKSDICSNRWLPCTSNKNSKKQKE-TNDDFKGKDLEIGSPRN----LNTAYQSSPNE--RSIKPTDRRNEYPLQNNSKEAAMENLEESSVRAADLIGSMAKNMDAQQAARATNAPNCSSKVPEGKDK--NRDNIMPSLELSLKRSRSTGDDANAIQEEQRNVLRRSDLSAFTRYHTPVASNQGGTGFVGSCSPHDNISEAMKTDSAYNMKSNSDAAPIKQGSNGSSNNNDMGSTTKNVVTKPSTNKERVMSPSAVKANGHTSAFHP 535
BLAST of g.arboreum_cottongen_reftransV1_0022276 vs. ExPASy Swiss-Prot
Match: PRR37_ORYSJ (Two-component response regulator-like PRR37 OS=Oryza sativa subsp. japonica GN=PRR37 PE=2 SV=1) HSP 1 Score: 96.2857 bits (238), Expect = 3.446e-20 Identity = 106/307 (34.53%), Postives = 150/307 (48.86%), Query Frame = 1 Query: 1 SSWTKRAAEGESSQPMSSLNRFPGAPNSTCAQVVHVKHEKRRSPWTCVTQRKECQEQHEQLLDATEGKDLEVRVESNNEWQCGNQCKNSPTHLAEAASKTFDRGWFEHQDENITGKDRIPDIIATLQQAECRASD-------------------APGGPSDVPQLKDGACHGSEEKLSFELTLKRWQGASDGRNAANDGH-NVLRHXXXXXXXXXXXXXXXKQALTGNVGSCSPLDHSSVTKKTEIMCTFPSHSNGILLNQSSVGSNNKNDMTTTAKFVGPKPKALVDKSGSISTFKCL-HSSSFQP 858 SSWTKRA E +S Q MS ++ P+STCAQV+H+K + + W T K ++Q E D +GKDLE+ N ++SP E + K DR ++E + + L+++ RA+D AP S VP+ KD + S EL+LKR + DG NA + NVLR SD SAF++Y T ++ Q TG +GSCS D+SS KT+ S+S+ + Q S GS+N NDM +T K V KP ++ S S K H+S+F P Sbjct: 245 SSWTKRAVEIDSPQAMSP-DQLADPPDSTCAQVIHLKSDICSNRWLPCTSNKNSKKQKE-TNDDFKGKDLEIGSPRN----LNTAYQSSPN---ERSIKPTDR-----RNEYPLQNNSKEAAMENLEESSVRAADLIGSMAKNMDAQQAARAANAPNCSSKVPEGKDK--NRDNIMPSLELSLKRSRSTGDGANAIQEEQRNVLRRSDLSAFTRYHTPVASNQGGTGFMGSCSLHDNSSEAMKTDSAYNMKSNSDAAPIKQGSNGSSNNNDMGSTTKNVVTKPSTNKERVMSPSAVKANGHTSAFHP 535
BLAST of g.arboreum_cottongen_reftransV1_0022276 vs. ExPASy Swiss-Prot
Match: PRR73_ORYSI (Two-component response regulator-like PRR73 OS=Oryza sativa subsp. indica GN=PRR73 PE=2 SV=2) HSP 1 Score: 86.6557 bits (213), Expect = 5.114e-17 Identity = 99/302 (32.78%), Postives = 149/302 (49.34%), Query Frame = 1 Query: 1 SSWTKRAAEGESSQPMSSLNRFPGAPNSTCAQVVHVKHEKRRSPWTCVTQRKECQEQHEQLLDATEGKDLEVRVESNN--EWQCG-NQCKNSPTH-----LAEAASKTFDRGWFEHQDENITGKDRIPDIIATLQQAE-----CRASDAPGGPSDVPQLKDGACHGSEEKLSFELTLKRWQGASDGRNAANDGHNVLRHXXXXXXXXXXXXXXXKQALTGNVGSCSPLDHSSVTKKTEIMCTFPSHSNGILLNQSSVGSNNKNDMTTTAKFVGPKPKALVDKSGSISTFKCL-HSSSFQPMH 864 SSWTKRA E +S Q MS ++ P+STCAQV+H E + W T K ++H++ D + GK LE+ N+ E+Q + +PT L + T + Q+E T + D+I+++ ++ R ++AP S VP D + S EL LKR + + +D N+L+ SD SAF++Y T ++ Q G GSCSP D+SS KT+ C S+S+ + Q S GS+N NDM ++ K KP + K S S K H+S+F P+ Sbjct: 270 SSWTKRAVEIDSPQQMSP-DQPSDLPDSTCAQVIHPTSEICSNRW-LPTANKRSGKKHKENNDDSMGKYLEIGAPRNSSMEYQSSPREMSVNPTEKQHETLMPQSKTTRETDSRNTQNEPTT---QTVDLISSIARSTDDKQVVRINNAPDCSSKVPDGNDKNRDSLIDMTSEELGLKRLK-TTGSATEIHDERNILKRSDLSAFTRYHTTVASNQGGAGFGGSCSPQDNSSEALKTDSNCKVKSNSDAAEIKQGSNGSSNNNDMGSSTKNAITKPSSNRGKVISPSAVKATQHTSAFHPVQ 565
BLAST of g.arboreum_cottongen_reftransV1_0022276 vs. ExPASy Swiss-Prot
Match: PRR73_ORYSJ (Two-component response regulator-like PRR73 OS=Oryza sativa subsp. japonica GN=PRR73 PE=2 SV=1) HSP 1 Score: 86.6557 bits (213), Expect = 6.141e-17 Identity = 99/302 (32.78%), Postives = 149/302 (49.34%), Query Frame = 1 Query: 1 SSWTKRAAEGESSQPMSSLNRFPGAPNSTCAQVVHVKHEKRRSPWTCVTQRKECQEQHEQLLDATEGKDLEVRVESNN--EWQCG-NQCKNSPTH-----LAEAASKTFDRGWFEHQDENITGKDRIPDIIATLQQAE-----CRASDAPGGPSDVPQLKDGACHGSEEKLSFELTLKRWQGASDGRNAANDGHNVLRHXXXXXXXXXXXXXXXKQALTGNVGSCSPLDHSSVTKKTEIMCTFPSHSNGILLNQSSVGSNNKNDMTTTAKFVGPKPKALVDKSGSISTFKCL-HSSSFQPMH 864 SSWTKRA E +S Q MS ++ P+STCAQV+H E + W T K ++H++ D + GK LE+ N+ E+Q + +PT L + T + Q+E T + D+I+++ ++ R ++AP S VP D + S EL LKR + + +D N+L+ SD SAF++Y T ++ Q G GSCSP D+SS KT+ C S+S+ + Q S GS+N NDM ++ K KP + K S S K H+S+F P+ Sbjct: 270 SSWTKRAVEIDSPQQMSP-DQPSDLPDSTCAQVIHPTSEICSNRW-LPTANKRSGKKHKENNDDSMGKYLEIGAPRNSSMEYQSSPREMSVNPTEKQHETLMPQSKTTRETDSRNTQNEPTT---QTVDLISSIARSTDDKQVVRINNAPDCSSKVPDGNDKNRDSLIDMTSEELGLKRLK-TTGSATEIHDERNILKRSDLSAFTRYHTTVASNQGGAGFGGSCSPQDNSSEALKTDSNCKVKSNSDAAEIKQGSNGSSNNNDMGSSTKNAITKPSSNRGKVISPSAVKATQHTSAFHPVQ 565 The following BLAST results are available for this feature:
BLAST of g.arboreum_cottongen_reftransV1_0022276 vs. ExPASy TrEMBL
Analysis Date: 2016-11-15 (Homology Analysis for Gossypium arboreum CottonGen RefTrans V1 vs TrEMBL) Total hits: 25
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BLAST of g.arboreum_cottongen_reftransV1_0022276 vs. ExPASy Swiss-Prot
Analysis Date: 2016-11-15 (Homology Analysis for Gossypium arboreum CottonGen RefTrans V1 vs SwissProt) Total hits: 4
Sequences
The
following sequences are available for this feature:
contig sequence >g.arboreum_cottongen_reftransV1_0022276 ID=g.arboreum_cottongen_reftransV1_0022276; Name=g.arboreum_cottongen_reftransV1_0022276; organism=Gossypium arboreum; type=contig; length=1185bpback to top |