g.arboreum_cottongen_reftransV1_0010846, g.arboreum_cottongen_reftransV1_0010846 (contig) Gossypium arboreum
Overview
Alignments
The following features are aligned
Analyses
This contig is derived from or has results from the following analyses
Homology
BLAST of g.arboreum_cottongen_reftransV1_0010846 vs. ExPASy TrEMBL
Match: A0A0B0NS02_GOSAR (Uncharacterized protein OS=Gossypium arboreum GN=F383_16601 PE=4 SV=1) HSP 1 Score: 249.595 bits (636), Expect = 4.488e-75 Identity = 121/121 (100.00%), Postives = 121/121 (100.00%), Query Frame = -1 Query: 1 LLSIYAKLGRFEEALDICREMEDSGMRRDVVTYNALLGGYGKQGKYDEVRALFDEMKAQKVSPNLLTYSTMIDVYSKGGLYDEAMDVFREFKWAGLKADVVLYSALIDALCKNGLVESAVS 363 LLSIYAKLGRFEEALDICREMEDSGMRRDVVTYNALLGGYGKQGKYDEVRALFDEMKAQKVSPNLLTYSTMIDVYSKGGLYDEAMDVFREFKWAGLKADVVLYSALIDALCKNGLVESAVS Sbjct: 398 LLSIYAKLGRFEEALDICREMEDSGMRRDVVTYNALLGGYGKQGKYDEVRALFDEMKAQKVSPNLLTYSTMIDVYSKGGLYDEAMDVFREFKWAGLKADVVLYSALIDALCKNGLVESAVS 518 HSP 2 Score: 90.8929 bits (224), Expect = 1.952e-18 Identity = 46/120 (38.33%), Postives = 73/120 (60.83%), Query Frame = -1 Query: 4 LLSIYAKLGRFEEALDICREMEDSGMRRDVVTYNALLGGYGKQGKYDEVRALFDEMKAQKVSPNLLTYSTMIDVYSKGGLYDEAMDVFREFKWAGLKADVVLYSALIDALCKNGLVESAV 363 LL++ ++ G +E A ++ EM D G+ RD+ TYN L K G+ D + EM A+ + PN++TYSTM+D Y+K G +D+A+++F E K+ G+ D V Y+ L+ K G E A+ Sbjct: 293 LLAVCSRGGLWEAARNLFSEMVDRGIDRDIFTYNTFLDAVCKGGQMDLAFEIMAEMPAKNIFPNVITYSTMVDGYAKAGRFDDALNLFNEMKFLGIGLDRVSYNTLLSIYAKLGRFEEAL 412 HSP 3 Score: 80.8777 bits (198), Expect = 6.066e-15 Identity = 40/120 (33.33%), Postives = 75/120 (62.50%), Query Frame = -1 Query: 7 LLSIYAKLGRFEEALDICREMEDSGMRRDVVTYNALLGGYGKQG-KYDEVRALFDEMKAQKVSPNLLTYSTMIDVYSKGGLYDEAMDVFREFKWAGLKADVVLYSALIDALCKNGLVESA 363 L+S + + G +EAL + M++ G++ ++V YNA++ GK G ++ V +FDEM V P+ +T+++++ V S+GGL++ A ++F E G+ D+ Y+ +DA+CK G ++ A Sbjct: 222 LISAFGRSGYCDEALKVFDSMKNYGLKPNLVIYNAVIDACGKGGLEFKRVVEIFDEMLRSGVQPDRITFNSLLAVCSRGGLWEAARNLFSEMVDRGIDRDIFTYNTFLDAVCKGGQMDLA 341 HSP 4 Score: 80.4925 bits (197), Expect = 6.610e-15 Identity = 39/114 (34.21%), Postives = 71/114 (62.28%), Query Frame = -1 Query: 22 LLSIYAKLGRFEEALDICREMEDSGMRRDVVTYNALLGGYGKQGKYDEVRALFDEMKAQKVSPNLLTYSTMIDVYSKGGLYDEAMDVFREFKWAGLKADVVLYSALIDALCKNG 363 L K G+ + A +I EM + +V+TY+ ++ GY K G++D+ LF+EMK + + ++Y+T++ +Y+K G ++EA+D+ RE + +G++ DVV Y+AL+ K G Sbjct: 328 FLDAVCKGGQMDLAFEIMAEMPAKNIFPNVITYSTMVDGYAKAGRFDDALNLFNEMKFLGIGLDRVSYNTLLSIYAKLGRFEEALDICREMEDSGMRRDVVTYNALLGGYGKQG 441 HSP 5 Score: 72.7886 bits (177), Expect = 2.802e-12 Identity = 38/120 (31.67%), Postives = 68/120 (56.67%), Query Frame = -1 Query: 7 LLSIYAKLGRFEEALDICREMEDSGMRRDVVTYNALLGGYGKQGKYDEVRALFDEMKAQKVSPNLLTYSTMIDVYSKGGL-YDEAMDVFREFKWAGLKADVVLYSALIDALCKNGLVESA 363 ++SI +LG+ E A I + G + V ++AL+ +G+ G DE +FD MK + PNL+ Y+ +ID KGGL + +++F E +G++ D + +++L+ + GL E+A Sbjct: 187 MISILGRLGKVELARGIFHTALNEGYGKTVYAFSALISAFGRSGYCDEALKVFDSMKNYGLKPNLVIYNAVIDACGKGGLEFKRVVEIFDEMLRSGVQPDRITFNSLLAVCSRGGLWEAA 306 HSP 6 Score: 67.781 bits (164), Expect = 1.477e-10 Identity = 29/86 (33.72%), Postives = 55/86 (63.95%), Query Frame = -1 Query: 106 LLSIYAKLGRFEEALDICREMEDSGMRRDVVTYNALLGGYGKQGKYDEVRALFDEMKAQKVSPNLLTYSTMIDVYSKGGLYDEAMD 363 ++ +Y+K G ++EA+D+ RE + +G++ DVV Y+AL+ K G + +L DEM + + PN++TY+++ID + + + A D Sbjct: 468 MIDVYSKGGLYDEAMDVFREFKWAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATSEHAFD 553
BLAST of g.arboreum_cottongen_reftransV1_0010846 vs. ExPASy TrEMBL
Match: A0A0D2SBY3_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_007G121300 PE=4 SV=1) HSP 1 Score: 239.195 bits (609), Expect = 1.034e-71 Identity = 118/121 (97.52%), Postives = 119/121 (98.35%), Query Frame = -1 Query: 1 LLSIYAKLGRFEEALDICREMEDSGMRRDVVTYNALLGGYGKQGKYDEVRALFDEMKAQKVSPNLLTYSTMIDVYSKGGLYDEAMDVFREFKWAGLKADVVLYSALIDALCKNGLVESAVS 363 LLSIYAKLGRFEEALDICREMEDSGMRRDVVTYNALLGGYGKQGKYDEVRALFDEMKAQKVSPNLLTYST+IDVYSKGGLYDEAMDVFREFK AGLKADVVLYSALIDALCKNGLVE AVS Sbjct: 398 LLSIYAKLGRFEEALDICREMEDSGMRRDVVTYNALLGGYGKQGKYDEVRALFDEMKAQKVSPNLLTYSTVIDVYSKGGLYDEAMDVFREFKRAGLKADVVLYSALIDALCKNGLVEYAVS 518 HSP 2 Score: 90.5077 bits (223), Expect = 2.159e-18 Identity = 46/120 (38.33%), Postives = 73/120 (60.83%), Query Frame = -1 Query: 4 LLSIYAKLGRFEEALDICREMEDSGMRRDVVTYNALLGGYGKQGKYDEVRALFDEMKAQKVSPNLLTYSTMIDVYSKGGLYDEAMDVFREFKWAGLKADVVLYSALIDALCKNGLVESAV 363 LL++ ++ G +E A ++ EM D G+ RD+ TYN L K G+ D + EM A+ + PN++TYSTM+D Y+K G +D+A+++F E K+ G+ D V Y+ L+ K G E A+ Sbjct: 293 LLAVCSRGGLWEAASNLFSEMVDRGIDRDIFTYNTFLDAVCKGGQMDLAFEIMAEMPAKNIFPNVITYSTMVDGYAKAGRFDDALNLFNEMKFLGIGLDRVSYNTLLSIYAKLGRFEEAL 412 HSP 3 Score: 80.4925 bits (197), Expect = 6.347e-15 Identity = 40/120 (33.33%), Postives = 75/120 (62.50%), Query Frame = -1 Query: 7 LLSIYAKLGRFEEALDICREMEDSGMRRDVVTYNALLGGYGKQG-KYDEVRALFDEMKAQKVSPNLLTYSTMIDVYSKGGLYDEAMDVFREFKWAGLKADVVLYSALIDALCKNGLVESA 363 L+S + + G +EAL + M++ G++ ++V YNA++ GK G ++ V +FDEM V P+ +T+++++ V S+GGL++ A ++F E G+ D+ Y+ +DA+CK G ++ A Sbjct: 222 LISAFGRSGYCDEALKVFDSMKNYGLKPNLVIYNAVIDACGKGGLEFKRVVEIFDEMLRSGVQPDRITFNSLLAVCSRGGLWEAASNLFSEMVDRGIDRDIFTYNTFLDAVCKGGQMDLA 341 HSP 4 Score: 80.4925 bits (197), Expect = 6.347e-15 Identity = 39/114 (34.21%), Postives = 71/114 (62.28%), Query Frame = -1 Query: 22 LLSIYAKLGRFEEALDICREMEDSGMRRDVVTYNALLGGYGKQGKYDEVRALFDEMKAQKVSPNLLTYSTMIDVYSKGGLYDEAMDVFREFKWAGLKADVVLYSALIDALCKNG 363 L K G+ + A +I EM + +V+TY+ ++ GY K G++D+ LF+EMK + + ++Y+T++ +Y+K G ++EA+D+ RE + +G++ DVV Y+AL+ K G Sbjct: 328 FLDAVCKGGQMDLAFEIMAEMPAKNIFPNVITYSTMVDGYAKAGRFDDALNLFNEMKFLGIGLDRVSYNTLLSIYAKLGRFEEALDICREMEDSGMRRDVVTYNALLGGYGKQG 441 HSP 5 Score: 72.0182 bits (175), Expect = 5.144e-12 Identity = 37/120 (30.83%), Postives = 68/120 (56.67%), Query Frame = -1 Query: 7 LLSIYAKLGRFEEALDICREMEDSGMRRDVVTYNALLGGYGKQGKYDEVRALFDEMKAQKVSPNLLTYSTMIDVYSKGGL-YDEAMDVFREFKWAGLKADVVLYSALIDALCKNGLVESA 363 ++SI +LG+ E A + + G + V ++AL+ +G+ G DE +FD MK + PNL+ Y+ +ID KGGL + +++F E +G++ D + +++L+ + GL E+A Sbjct: 187 MISILGRLGKVELARGVFHTALNEGYGKTVYAFSALISAFGRSGYCDEALKVFDSMKNYGLKPNLVIYNAVIDACGKGGLEFKRVVEIFDEMLRSGVQPDRITFNSLLAVCSRGGLWEAA 306 HSP 6 Score: 65.4698 bits (158), Expect = 8.374e-10 Identity = 28/86 (32.56%), Postives = 54/86 (62.79%), Query Frame = -1 Query: 106 LLSIYAKLGRFEEALDICREMEDSGMRRDVVTYNALLGGYGKQGKYDEVRALFDEMKAQKVSPNLLTYSTMIDVYSKGGLYDEAMD 363 ++ +Y+K G ++EA+D+ RE + +G++ DVV Y+AL+ K G + +L DEM + + PN++TY+++ID + + + D Sbjct: 468 VIDVYSKGGLYDEAMDVFREFKRAGLKADVVLYSALIDALCKNGLVEYAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATSEHVFD 553
BLAST of g.arboreum_cottongen_reftransV1_0010846 vs. ExPASy TrEMBL
Match: A0A0D2QR84_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_007G121300 PE=4 SV=1) HSP 1 Score: 239.195 bits (609), Expect = 2.192e-71 Identity = 118/121 (97.52%), Postives = 119/121 (98.35%), Query Frame = -1 Query: 1 LLSIYAKLGRFEEALDICREMEDSGMRRDVVTYNALLGGYGKQGKYDEVRALFDEMKAQKVSPNLLTYSTMIDVYSKGGLYDEAMDVFREFKWAGLKADVVLYSALIDALCKNGLVESAVS 363 LLSIYAKLGRFEEALDICREMEDSGMRRDVVTYNALLGGYGKQGKYDEVRALFDEMKAQKVSPNLLTYST+IDVYSKGGLYDEAMDVFREFK AGLKADVVLYSALIDALCKNGLVE AVS Sbjct: 398 LLSIYAKLGRFEEALDICREMEDSGMRRDVVTYNALLGGYGKQGKYDEVRALFDEMKAQKVSPNLLTYSTVIDVYSKGGLYDEAMDVFREFKRAGLKADVVLYSALIDALCKNGLVEYAVS 518 HSP 2 Score: 90.5077 bits (223), Expect = 2.211e-18 Identity = 46/120 (38.33%), Postives = 73/120 (60.83%), Query Frame = -1 Query: 4 LLSIYAKLGRFEEALDICREMEDSGMRRDVVTYNALLGGYGKQGKYDEVRALFDEMKAQKVSPNLLTYSTMIDVYSKGGLYDEAMDVFREFKWAGLKADVVLYSALIDALCKNGLVESAV 363 LL++ ++ G +E A ++ EM D G+ RD+ TYN L K G+ D + EM A+ + PN++TYSTM+D Y+K G +D+A+++F E K+ G+ D V Y+ L+ K G E A+ Sbjct: 293 LLAVCSRGGLWEAASNLFSEMVDRGIDRDIFTYNTFLDAVCKGGQMDLAFEIMAEMPAKNIFPNVITYSTMVDGYAKAGRFDDALNLFNEMKFLGIGLDRVSYNTLLSIYAKLGRFEEAL 412 HSP 3 Score: 80.4925 bits (197), Expect = 6.423e-15 Identity = 40/120 (33.33%), Postives = 75/120 (62.50%), Query Frame = -1 Query: 7 LLSIYAKLGRFEEALDICREMEDSGMRRDVVTYNALLGGYGKQG-KYDEVRALFDEMKAQKVSPNLLTYSTMIDVYSKGGLYDEAMDVFREFKWAGLKADVVLYSALIDALCKNGLVESA 363 L+S + + G +EAL + M++ G++ ++V YNA++ GK G ++ V +FDEM V P+ +T+++++ V S+GGL++ A ++F E G+ D+ Y+ +DA+CK G ++ A Sbjct: 222 LISAFGRSGYCDEALKVFDSMKNYGLKPNLVIYNAVIDACGKGGLEFKRVVEIFDEMLRSGVQPDRITFNSLLAVCSRGGLWEAASNLFSEMVDRGIDRDIFTYNTFLDAVCKGGQMDLA 341 HSP 4 Score: 80.4925 bits (197), Expect = 6.547e-15 Identity = 39/114 (34.21%), Postives = 71/114 (62.28%), Query Frame = -1 Query: 22 LLSIYAKLGRFEEALDICREMEDSGMRRDVVTYNALLGGYGKQGKYDEVRALFDEMKAQKVSPNLLTYSTMIDVYSKGGLYDEAMDVFREFKWAGLKADVVLYSALIDALCKNG 363 L K G+ + A +I EM + +V+TY+ ++ GY K G++D+ LF+EMK + + ++Y+T++ +Y+K G ++EA+D+ RE + +G++ DVV Y+AL+ K G Sbjct: 328 FLDAVCKGGQMDLAFEIMAEMPAKNIFPNVITYSTMVDGYAKAGRFDDALNLFNEMKFLGIGLDRVSYNTLLSIYAKLGRFEEALDICREMEDSGMRRDVVTYNALLGGYGKQG 441 HSP 5 Score: 72.4034 bits (176), Expect = 4.712e-12 Identity = 37/120 (30.83%), Postives = 68/120 (56.67%), Query Frame = -1 Query: 7 LLSIYAKLGRFEEALDICREMEDSGMRRDVVTYNALLGGYGKQGKYDEVRALFDEMKAQKVSPNLLTYSTMIDVYSKGGL-YDEAMDVFREFKWAGLKADVVLYSALIDALCKNGLVESA 363 ++SI +LG+ E A + + G + V ++AL+ +G+ G DE +FD MK + PNL+ Y+ +ID KGGL + +++F E +G++ D + +++L+ + GL E+A Sbjct: 187 MISILGRLGKVELARGVFHTALNEGYGKTVYAFSALISAFGRSGYCDEALKVFDSMKNYGLKPNLVIYNAVIDACGKGGLEFKRVVEIFDEMLRSGVQPDRITFNSLLAVCSRGGLWEAA 306 HSP 6 Score: 65.4698 bits (158), Expect = 8.504e-10 Identity = 28/86 (32.56%), Postives = 54/86 (62.79%), Query Frame = -1 Query: 106 LLSIYAKLGRFEEALDICREMEDSGMRRDVVTYNALLGGYGKQGKYDEVRALFDEMKAQKVSPNLLTYSTMIDVYSKGGLYDEAMD 363 ++ +Y+K G ++EA+D+ RE + +G++ DVV Y+AL+ K G + +L DEM + + PN++TY+++ID + + + D Sbjct: 468 VIDVYSKGGLYDEAMDVFREFKRAGLKADVVLYSALIDALCKNGLVEYAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATSEHVFD 553
BLAST of g.arboreum_cottongen_reftransV1_0010846 vs. ExPASy TrEMBL
Match: A0A0D2REW6_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_008G138300 PE=4 SV=1) HSP 1 Score: 230.72 bits (587), Expect = 1.629e-68 Identity = 113/121 (93.39%), Postives = 118/121 (97.52%), Query Frame = -1 Query: 1 LLSIYAKLGRFEEALDICREMEDSGMRRDVVTYNALLGGYGKQGKYDEVRALFDEMKAQKVSPNLLTYSTMIDVYSKGGLYDEAMDVFREFKWAGLKADVVLYSALIDALCKNGLVESAVS 363 LLSIYAKLGRFEEALDICREME SG+R+DVVTYNALLGGYGKQGKYDEVR LFDEMKAQ+VSPNLLTYST+IDVYSKGGLY+EAMDVFREFK AGLKADVVLYSALIDALCKNGLVESAVS Sbjct: 404 LLSIYAKLGRFEEALDICREMEGSGIRKDVVTYNALLGGYGKQGKYDEVRRLFDEMKAQRVSPNLLTYSTVIDVYSKGGLYEEAMDVFREFKRAGLKADVVLYSALIDALCKNGLVESAVS 524 HSP 2 Score: 88.9669 bits (219), Expect = 7.311e-18 Identity = 43/120 (35.83%), Postives = 79/120 (65.83%), Query Frame = -1 Query: 7 LLSIYAKLGRFEEALDICREMEDSGMRRDVVTYNALLGGYGKQG-KYDEVRALFDEMKAQKVSPNLLTYSTMIDVYSKGGLYDEAMDVFREFKWAGLKADVVLYSALIDALCKNGLVESA 363 L+S Y + G ++EA+ + M++ G++ + VTYNA++ GK G ++ V +FDEM + V P+ +T+++++ V S+GGL++ AM++F E G+ D+ Y+ L+DA+CK G ++ A Sbjct: 229 LISAYGRSGYYDEAIKVFDSMKNYGLKPNSVTYNAVIDACGKGGVEFKRVVEIFDEMLSGGVQPDRITFNSLLAVCSRGGLWEAAMNLFSEMVNRGIDRDIFTYNTLLDAVCKGGQMDLA 348 HSP 3 Score: 85.1149 bits (209), Expect = 1.494e-16 Identity = 46/120 (38.33%), Postives = 75/120 (62.50%), Query Frame = -1 Query: 4 LLSIYAKLGRFEEALDICREMEDSGMRRDVVTYNALLGGYGKQGKYDEVRALFDEMKAQKVSPNLLTYSTMIDVYSKGGLYDEAMDVFREFKWAGLKADVVLYSALIDALCKNGLVESAV 363 LL++ ++ G +E A+++ EM + G+ RD+ TYN LL K G+ D + +EM A V PN++TYST+ID Y+K G +++A+++F E K+ G+ D V Y+ L+ K G E A+ Sbjct: 300 LLAVCSRGGLWEAAMNLFSEMVNRGIDRDIFTYNTLLDAVCKGGQMDLAFDIMEEMPAN-VLPNVVTYSTIIDGYAKAGRFNDALNLFNEMKFLGIGLDRVSYNTLLSIYAKLGRFEEAL 418 HSP 4 Score: 80.8777 bits (198), Expect = 4.744e-15 Identity = 41/114 (35.96%), Postives = 73/114 (64.04%), Query Frame = -1 Query: 22 LLSIYAKLGRFEEALDICREMEDSGMRRDVVTYNALLGGYGKQGKYDEVRALFDEMKAQKVSPNLLTYSTMIDVYSKGGLYDEAMDVFREFKWAGLKADVVLYSALIDALCKNG 363 LL K G+ + A DI EM + + +VVTY+ ++ GY K G++++ LF+EMK + + ++Y+T++ +Y+K G ++EA+D+ RE + +G++ DVV Y+AL+ K G Sbjct: 335 LLDAVCKGGQMDLAFDIMEEMP-ANVLPNVVTYSTIIDGYAKAGRFNDALNLFNEMKFLGIGLDRVSYNTLLSIYAKLGRFEEALDICREMEGSGIRKDVVTYNALLGGYGKQG 447 HSP 5 Score: 74.7146 bits (182), Expect = 5.673e-13 Identity = 39/122 (31.97%), Postives = 69/122 (56.56%), Query Frame = -1 Query: 1 LLSIYAKLGRFEEALDICREMEDSGMRRDVVTYNALLGGYGKQGKYDEVRALFDEMKAQKVSPNLLTYSTMIDVYSKGGL-YDEAMDVFREFKWAGLKADVVLYSALIDALCKNGLVESAVS 363 ++SI +LG+ E A+ I G V ++AL+ YG+ G YDE +FD MK + PN +TY+ +ID KGG+ + +++F E G++ D + +++L+ + GL E+A++ Sbjct: 194 MISILGRLGKVELAMGIFETALREGYGNTVYAFSALISAYGRSGYYDEAIKVFDSMKNYGLKPNSVTYNAVIDACGKGGVEFKRVVEIFDEMLSGGVQPDRITFNSLLAVCSRGGLWEAAMN 315 HSP 6 Score: 66.2402 bits (160), Expect = 5.262e-10 Identity = 28/77 (36.36%), Postives = 52/77 (67.53%), Query Frame = -1 Query: 133 LLSIYAKLGRFEEALDICREMEDSGMRRDVVTYNALLGGYGKQGKYDEVRALFDEMKAQKVSPNLLTYSTMIDVYSK 363 ++ +Y+K G +EEA+D+ RE + +G++ DVV Y+AL+ K G + +L DEM + + PN++TY+++ID + + Sbjct: 474 VIDVYSKGGLYEEAMDVFREFKRAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGR 550 HSP 7 Score: 65.0846 bits (157), Expect = 1.245e-9 Identity = 36/111 (32.43%), Postives = 60/111 (54.05%), Query Frame = -1 Query: 1 FEEALDICREMEDSGMRRDVVTYNALLGGYGKQGKYDEVRALFDEMKAQKVSPNLLTYSTMIDVYSKGGLYDEAMDVFREFKWAGLKADVVLYSALIDALCKNGLVESAVS 333 F+ ++I EM G++ D +T+N+LL + G ++ LF EM + + ++ TY+T++D KGG D A D+ E A + +VV YS +ID K G A++ Sbjct: 275 FKRVVEIFDEMLSGGVQPDRITFNSLLAVCSRGGLWEAAMNLFSEMVNRGIDRDIFTYNTLLDAVCKGGQMDLAFDIMEEMP-ANVLPNVVTYSTIIDGYAKAGRFNDALN 384
BLAST of g.arboreum_cottongen_reftransV1_0010846 vs. ExPASy TrEMBL
Match: A0A0B0PW05_GOSAR (Uncharacterized protein OS=Gossypium arboreum GN=F383_05807 PE=4 SV=1) HSP 1 Score: 231.491 bits (589), Expect = 1.820e-68 Identity = 113/121 (93.39%), Postives = 118/121 (97.52%), Query Frame = -1 Query: 1 LLSIYAKLGRFEEALDICREMEDSGMRRDVVTYNALLGGYGKQGKYDEVRALFDEMKAQKVSPNLLTYSTMIDVYSKGGLYDEAMDVFREFKWAGLKADVVLYSALIDALCKNGLVESAVS 363 LLSIYAKLGRFEEALDICREME SG+R+DVVTYNALLGGYGKQGKYDEVR LFDEMKAQ+VSPNLLTYST+IDVYSKGGLY+EAMDVFREFK AGLKADVVLYSALIDALCKNGLVESAVS Sbjct: 404 LLSIYAKLGRFEEALDICREMEGSGIRKDVVTYNALLGGYGKQGKYDEVRRLFDEMKAQRVSPNLLTYSTVIDVYSKGGLYEEAMDVFREFKRAGLKADVVLYSALIDALCKNGLVESAVS 524 HSP 2 Score: 89.3521 bits (220), Expect = 6.238e-18 Identity = 43/120 (35.83%), Postives = 79/120 (65.83%), Query Frame = -1 Query: 7 LLSIYAKLGRFEEALDICREMEDSGMRRDVVTYNALLGGYGKQG-KYDEVRALFDEMKAQKVSPNLLTYSTMIDVYSKGGLYDEAMDVFREFKWAGLKADVVLYSALIDALCKNGLVESA 363 L+S Y + G ++EA+ + M++ G++ + VTYNA++ GK G ++ V +FDEM + V P+ +T+++++ V S+GGL++ AM++F E G+ D+ Y+ L+DA+CK G ++ A Sbjct: 229 LISAYGRSGYYDEAIKVFDSMKNYGLKPNSVTYNAVIDACGKGGVEFKRVVEIFDEMLSGGVQPDRITFNSLLAVCSRGGLWEAAMNLFSEMVNRGIDRDIFTYNTLLDAVCKGGQMDLA 348 HSP 3 Score: 83.5741 bits (205), Expect = 7.080e-16 Identity = 46/120 (38.33%), Postives = 73/120 (60.83%), Query Frame = -1 Query: 4 LLSIYAKLGRFEEALDICREMEDSGMRRDVVTYNALLGGYGKQGKYDEVRALFDEMKAQKVSPNLLTYSTMIDVYSKGGLYDEAMDVFREFKWAGLKADVVLYSALIDALCKNGLVESAV 363 LL++ ++ G +E A+++ EM + G+ RD+ TYN LL K G+ D + EM A V PN++TYSTMID Y+K +++A+++F E K+ G+ D V Y+ L+ K G E A+ Sbjct: 300 LLAVCSRGGLWEAAMNLFSEMVNRGIDRDIFTYNTLLDAVCKGGQMDLAFDIMAEMPAN-VLPNVVTYSTMIDGYAKASRFNDALNLFNEMKFLGIGLDRVSYNTLLSIYAKLGRFEEAL 418 HSP 4 Score: 78.1814 bits (191), Expect = 4.154e-14 Identity = 40/114 (35.09%), Postives = 72/114 (63.16%), Query Frame = -1 Query: 22 LLSIYAKLGRFEEALDICREMEDSGMRRDVVTYNALLGGYGKQGKYDEVRALFDEMKAQKVSPNLLTYSTMIDVYSKGGLYDEAMDVFREFKWAGLKADVVLYSALIDALCKNG 363 LL K G+ + A DI EM + + +VVTY+ ++ GY K ++++ LF+EMK + + ++Y+T++ +Y+K G ++EA+D+ RE + +G++ DVV Y+AL+ K G Sbjct: 335 LLDAVCKGGQMDLAFDIMAEMP-ANVLPNVVTYSTMIDGYAKASRFNDALNLFNEMKFLGIGLDRVSYNTLLSIYAKLGRFEEALDICREMEGSGIRKDVVTYNALLGGYGKQG 447 HSP 5 Score: 75.0998 bits (183), Expect = 5.098e-13 Identity = 39/122 (31.97%), Postives = 69/122 (56.56%), Query Frame = -1 Query: 1 LLSIYAKLGRFEEALDICREMEDSGMRRDVVTYNALLGGYGKQGKYDEVRALFDEMKAQKVSPNLLTYSTMIDVYSKGGL-YDEAMDVFREFKWAGLKADVVLYSALIDALCKNGLVESAVS 363 ++SI +LG+ E A+ I G V ++AL+ YG+ G YDE +FD MK + PN +TY+ +ID KGG+ + +++F E G++ D + +++L+ + GL E+A++ Sbjct: 194 MISILGRLGKVELAMGIFETALREGYGNTVYAFSALISAYGRSGYYDEAIKVFDSMKNYGLKPNSVTYNAVIDACGKGGVEFKRVVEIFDEMLSGGVQPDRITFNSLLAVCSRGGLWEAAMN 315 HSP 6 Score: 66.2402 bits (160), Expect = 4.589e-10 Identity = 28/77 (36.36%), Postives = 52/77 (67.53%), Query Frame = -1 Query: 133 LLSIYAKLGRFEEALDICREMEDSGMRRDVVTYNALLGGYGKQGKYDEVRALFDEMKAQKVSPNLLTYSTMIDVYSK 363 ++ +Y+K G +EEA+D+ RE + +G++ DVV Y+AL+ K G + +L DEM + + PN++TY+++ID + + Sbjct: 474 VIDVYSKGGLYEEAMDVFREFKRAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGR 550 HSP 7 Score: 62.7734 bits (151), Expect = 6.975e-9 Identity = 34/102 (33.33%), Postives = 56/102 (54.90%), Query Frame = -1 Query: 28 FEEALDICREMEDSGMRRDVVTYNALLGGYGKQGKYDEVRALFDEMKAQKVSPNLLTYSTMIDVYSKGGLYDEAMDVFREFKWAGLKADVVLYSALIDALCK 333 F+ ++I EM G++ D +T+N+LL + G ++ LF EM + + ++ TY+T++D KGG D A D+ E A + +VV YS +ID K Sbjct: 275 FKRVVEIFDEMLSGGVQPDRITFNSLLAVCSRGGLWEAAMNLFSEMVNRGIDRDIFTYNTLLDAVCKGGQMDLAFDIMAEMP-ANVLPNVVTYSTMIDGYAK 375
BLAST of g.arboreum_cottongen_reftransV1_0010846 vs. ExPASy TrEMBL
Match: A0A0D2PUG7_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_008G138300 PE=4 SV=1) HSP 1 Score: 231.491 bits (589), Expect = 2.411e-68 Identity = 113/121 (93.39%), Postives = 118/121 (97.52%), Query Frame = -1 Query: 1 LLSIYAKLGRFEEALDICREMEDSGMRRDVVTYNALLGGYGKQGKYDEVRALFDEMKAQKVSPNLLTYSTMIDVYSKGGLYDEAMDVFREFKWAGLKADVVLYSALIDALCKNGLVESAVS 363 LLSIYAKLGRFEEALDICREME SG+R+DVVTYNALLGGYGKQGKYDEVR LFDEMKAQ+VSPNLLTYST+IDVYSKGGLY+EAMDVFREFK AGLKADVVLYSALIDALCKNGLVESAVS Sbjct: 491 LLSIYAKLGRFEEALDICREMEGSGIRKDVVTYNALLGGYGKQGKYDEVRRLFDEMKAQRVSPNLLTYSTVIDVYSKGGLYEEAMDVFREFKRAGLKADVVLYSALIDALCKNGLVESAVS 611 HSP 2 Score: 89.3521 bits (220), Expect = 7.631e-18 Identity = 43/120 (35.83%), Postives = 79/120 (65.83%), Query Frame = -1 Query: 7 LLSIYAKLGRFEEALDICREMEDSGMRRDVVTYNALLGGYGKQG-KYDEVRALFDEMKAQKVSPNLLTYSTMIDVYSKGGLYDEAMDVFREFKWAGLKADVVLYSALIDALCKNGLVESA 363 L+S Y + G ++EA+ + M++ G++ + VTYNA++ GK G ++ V +FDEM + V P+ +T+++++ V S+GGL++ AM++F E G+ D+ Y+ L+DA+CK G ++ A Sbjct: 316 LISAYGRSGYYDEAIKVFDSMKNYGLKPNSVTYNAVIDACGKGGVEFKRVVEIFDEMLSGGVQPDRITFNSLLAVCSRGGLWEAAMNLFSEMVNRGIDRDIFTYNTLLDAVCKGGQMDLA 435 HSP 3 Score: 85.5001 bits (210), Expect = 1.385e-16 Identity = 46/120 (38.33%), Postives = 75/120 (62.50%), Query Frame = -1 Query: 4 LLSIYAKLGRFEEALDICREMEDSGMRRDVVTYNALLGGYGKQGKYDEVRALFDEMKAQKVSPNLLTYSTMIDVYSKGGLYDEAMDVFREFKWAGLKADVVLYSALIDALCKNGLVESAV 363 LL++ ++ G +E A+++ EM + G+ RD+ TYN LL K G+ D + +EM A V PN++TYST+ID Y+K G +++A+++F E K+ G+ D V Y+ L+ K G E A+ Sbjct: 387 LLAVCSRGGLWEAAMNLFSEMVNRGIDRDIFTYNTLLDAVCKGGQMDLAFDIMEEMPAN-VLPNVVTYSTIIDGYAKAGRFNDALNLFNEMKFLGIGLDRVSYNTLLSIYAKLGRFEEAL 505 HSP 4 Score: 80.8777 bits (198), Expect = 4.998e-15 Identity = 41/114 (35.96%), Postives = 73/114 (64.04%), Query Frame = -1 Query: 22 LLSIYAKLGRFEEALDICREMEDSGMRRDVVTYNALLGGYGKQGKYDEVRALFDEMKAQKVSPNLLTYSTMIDVYSKGGLYDEAMDVFREFKWAGLKADVVLYSALIDALCKNG 363 LL K G+ + A DI EM + + +VVTY+ ++ GY K G++++ LF+EMK + + ++Y+T++ +Y+K G ++EA+D+ RE + +G++ DVV Y+AL+ K G Sbjct: 422 LLDAVCKGGQMDLAFDIMEEMP-ANVLPNVVTYSTIIDGYAKAGRFNDALNLFNEMKFLGIGLDRVSYNTLLSIYAKLGRFEEALDICREMEGSGIRKDVVTYNALLGGYGKQG 534 HSP 5 Score: 75.0998 bits (183), Expect = 5.867e-13 Identity = 39/122 (31.97%), Postives = 69/122 (56.56%), Query Frame = -1 Query: 1 LLSIYAKLGRFEEALDICREMEDSGMRRDVVTYNALLGGYGKQGKYDEVRALFDEMKAQKVSPNLLTYSTMIDVYSKGGL-YDEAMDVFREFKWAGLKADVVLYSALIDALCKNGLVESAVS 363 ++SI +LG+ E A+ I G V ++AL+ YG+ G YDE +FD MK + PN +TY+ +ID KGG+ + +++F E G++ D + +++L+ + GL E+A++ Sbjct: 281 MISILGRLGKVELAMGIFETALREGYGNTVYAFSALISAYGRSGYYDEAIKVFDSMKNYGLKPNSVTYNAVIDACGKGGVEFKRVVEIFDEMLSGGVQPDRITFNSLLAVCSRGGLWEAAMN 402 HSP 6 Score: 66.2402 bits (160), Expect = 4.979e-10 Identity = 28/77 (36.36%), Postives = 52/77 (67.53%), Query Frame = -1 Query: 133 LLSIYAKLGRFEEALDICREMEDSGMRRDVVTYNALLGGYGKQGKYDEVRALFDEMKAQKVSPNLLTYSTMIDVYSK 363 ++ +Y+K G +EEA+D+ RE + +G++ DVV Y+AL+ K G + +L DEM + + PN++TY+++ID + + Sbjct: 561 VIDVYSKGGLYEEAMDVFREFKRAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGR 637 HSP 7 Score: 65.4698 bits (158), Expect = 1.031e-9 Identity = 36/111 (32.43%), Postives = 60/111 (54.05%), Query Frame = -1 Query: 1 FEEALDICREMEDSGMRRDVVTYNALLGGYGKQGKYDEVRALFDEMKAQKVSPNLLTYSTMIDVYSKGGLYDEAMDVFREFKWAGLKADVVLYSALIDALCKNGLVESAVS 333 F+ ++I EM G++ D +T+N+LL + G ++ LF EM + + ++ TY+T++D KGG D A D+ E A + +VV YS +ID K G A++ Sbjct: 362 FKRVVEIFDEMLSGGVQPDRITFNSLLAVCSRGGLWEAAMNLFSEMVNRGIDRDIFTYNTLLDAVCKGGQMDLAFDIMEEMP-ANVLPNVVTYSTIIDGYAKAGRFNDALN 471
BLAST of g.arboreum_cottongen_reftransV1_0010846 vs. ExPASy TrEMBL
Match: A0A061DZ63_THECC (S uncoupled 1 OS=Theobroma cacao GN=TCM_004835 PE=4 SV=1) HSP 1 Score: 228.409 bits (581), Expect = 2.207e-67 Identity = 110/121 (90.91%), Postives = 116/121 (95.87%), Query Frame = -1 Query: 1 LLSIYAKLGRFEEALDICREMEDSGMRRDVVTYNALLGGYGKQGKYDEVRALFDEMKAQKVSPNLLTYSTMIDVYSKGGLYDEAMDVFREFKWAGLKADVVLYSALIDALCKNGLVESAVS 363 +LSIYAKLGRFEEALDICREME SG+R+DVVTYNALLGGYGKQGKYDEVR LF+EMK QKVSPNLLTYST+IDVYSKGGLY+EAMDVFREFK GLKADVVLYSALIDALCKNGLVESAVS Sbjct: 402 VLSIYAKLGRFEEALDICREMEGSGIRKDVVTYNALLGGYGKQGKYDEVRRLFEEMKTQKVSPNLLTYSTVIDVYSKGGLYEEAMDVFREFKRVGLKADVVLYSALIDALCKNGLVESAVS 522 HSP 2 Score: 87.0409 bits (214), Expect = 4.558e-17 Identity = 41/120 (34.17%), Postives = 78/120 (65.00%), Query Frame = -1 Query: 7 LLSIYAKLGRFEEALDICREMEDSGMRRDVVTYNALLGGYGKQG-KYDEVRALFDEMKAQKVSPNLLTYSTMIDVYSKGGLYDEAMDVFREFKWAGLKADVVLYSALIDALCKNGLVESA 363 L+S + + G +EA+ + M+++G++ ++VTYNA++ GK G ++ V +FDEM V P+ +T+++++ V S+GGL++ A ++F E G+ D+ Y+ L+DA+CK G ++ A Sbjct: 226 LISAFGRSGYSDEAIKVFDSMKNNGLKPNLVTYNAVIDACGKGGVEFKRVVEIFDEMLRSGVQPDRITFNSLLAVCSRGGLWEAARNLFSEMVHRGIDQDIFTYNTLLDAVCKGGQMDLA 345 HSP 3 Score: 87.0409 bits (214), Expect = 4.646e-17 Identity = 44/120 (36.67%), Postives = 72/120 (60.00%), Query Frame = -1 Query: 4 LLSIYAKLGRFEEALDICREMEDSGMRRDVVTYNALLGGYGKQGKYDEVRALFDEMKAQKVSPNLLTYSTMIDVYSKGGLYDEAMDVFREFKWAGLKADVVLYSALIDALCKNGLVESAV 363 LL++ ++ G +E A ++ EM G+ +D+ TYN LL K G+ D + EM + + PN++TYSTMID Y+K G +D+A+++F E K+ G+ D V Y+ ++ K G E A+ Sbjct: 297 LLAVCSRGGLWEAARNLFSEMVHRGIDQDIFTYNTLLDAVCKGGQMDLAFEIMAEMPTKNILPNVVTYSTMIDGYAKAGRFDDALNLFNEMKFLGIGLDRVSYNTVLSIYAKLGRFEEAL 416 HSP 4 Score: 86.2705 bits (212), Expect = 6.750e-17 Identity = 41/114 (35.96%), Postives = 72/114 (63.16%), Query Frame = -1 Query: 22 LLSIYAKLGRFEEALDICREMEDSGMRRDVVTYNALLGGYGKQGKYDEVRALFDEMKAQKVSPNLLTYSTMIDVYSKGGLYDEAMDVFREFKWAGLKADVVLYSALIDALCKNG 363 LL K G+ + A +I EM + +VVTY+ ++ GY K G++D+ LF+EMK + + ++Y+T++ +Y+K G ++EA+D+ RE + +G++ DVV Y+AL+ K G Sbjct: 332 LLDAVCKGGQMDLAFEIMAEMPTKNILPNVVTYSTMIDGYAKAGRFDDALNLFNEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALDICREMEGSGIRKDVVTYNALLGGYGKQG 445 HSP 5 Score: 73.559 bits (179), Expect = 1.718e-12 Identity = 38/120 (31.67%), Postives = 67/120 (55.83%), Query Frame = -1 Query: 7 LLSIYAKLGRFEEALDICREMEDSGMRRDVVTYNALLGGYGKQGKYDEVRALFDEMKAQKVSPNLLTYSTMIDVYSKGGL-YDEAMDVFREFKWAGLKADVVLYSALIDALCKNGLVESA 363 ++SI +LG+ E A I G V ++AL+ +G+ G DE +FD MK + PNL+TY+ +ID KGG+ + +++F E +G++ D + +++L+ + GL E+A Sbjct: 191 MISILGRLGKVELAKGIFETALTEGYGNTVYAFSALISAFGRSGYSDEAIKVFDSMKNNGLKPNLVTYNAVIDACGKGGVEFKRVVEIFDEMLRSGVQPDRITFNSLLAVCSRGGLWEAA 310 HSP 6 Score: 70.8626 bits (172), Expect = 1.321e-11 Identity = 36/111 (32.43%), Postives = 62/111 (55.86%), Query Frame = -1 Query: 1 FEEALDICREMEDSGMRRDVVTYNALLGGYGKQGKYDEVRALFDEMKAQKVSPNLLTYSTMIDVYSKGGLYDEAMDVFREFKWAGLKADVVLYSALIDALCKNGLVESAVS 333 F+ ++I EM SG++ D +T+N+LL + G ++ R LF EM + + ++ TY+T++D KGG D A ++ E + +VV YS +ID K G + A++ Sbjct: 272 FKRVVEIFDEMLRSGVQPDRITFNSLLAVCSRGGLWEAARNLFSEMVHRGIDQDIFTYNTLLDAVCKGGQMDLAFEIMAEMPTKNILPNVVTYSTMIDGYAKAGRFDDALN 382 HSP 7 Score: 69.3218 bits (168), Expect = 4.327e-11 Identity = 30/86 (34.88%), Postives = 54/86 (62.79%), Query Frame = -1 Query: 106 LLSIYAKLGRFEEALDICREMEDSGMRRDVVTYNALLGGYGKQGKYDEVRALFDEMKAQKVSPNLLTYSTMIDVYSKGGLYDEAMD 363 ++ +Y+K G +EEA+D+ RE + G++ DVV Y+AL+ K G + +L DEM + + PN++TY+++ID + + + A D Sbjct: 472 VIDVYSKGGLYEEAMDVFREFKRVGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATSECAFD 557
BLAST of g.arboreum_cottongen_reftransV1_0010846 vs. ExPASy TrEMBL
Match: B9GSV1_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0002s19470g PE=4 SV=2) HSP 1 Score: 218.779 bits (556), Expect = 5.864e-64 Identity = 106/121 (87.60%), Postives = 115/121 (95.04%), Query Frame = -1 Query: 1 LLSIYAKLGRFEEALDICREMEDSGMRRDVVTYNALLGGYGKQGKYDEVRALFDEMKAQKVSPNLLTYSTMIDVYSKGGLYDEAMDVFREFKWAGLKADVVLYSALIDALCKNGLVESAVS 363 LLSIYAKLGRFEEA+D+CREME+SG+R+DVVTYNALLGGYGKQ KYD VR +F+EMKA+ VSPNLLTYST+IDVYSKGGLY EAMDVFREFK AGLKADVVLYSALIDALCKNGLVESAVS Sbjct: 410 LLSIYAKLGRFEEAMDVCREMENSGIRKDVVTYNALLGGYGKQYKYDVVRKVFEEMKARHVSPNLLTYSTLIDVYSKGGLYREAMDVFREFKKAGLKADVVLYSALIDALCKNGLVESAVS 530 HSP 2 Score: 88.1965 bits (217), Expect = 1.663e-17 Identity = 43/107 (40.19%), Postives = 71/107 (66.36%), Query Frame = -1 Query: 43 LLSIYAKLGRFEEALDICREMEDSGMRRDVVTYNALLGGYGKQGKYDEVRALFDEMKAQKVSPNLLTYSTMIDVYSKGGLYDEAMDVFREFKWAGLKADVVLYSALI 363 LL K G+ + A +I EM + +VVTY+ ++ GY K G+ D+ R LF+EMK +S + ++Y+T++ +Y+K G ++EAMDV RE + +G++ DVV Y+AL+ Sbjct: 340 LLDAVCKGGQLDMAFEIMSEMPAKNILPNVVTYSTMIDGYAKAGRLDDARNLFNEMKFLGISLDRVSYNTLLSIYAKLGRFEEAMDVCREMENSGIRKDVVTYNALL 446 HSP 3 Score: 87.0409 bits (214), Expect = 3.512e-17 Identity = 47/120 (39.17%), Postives = 71/120 (59.17%), Query Frame = -1 Query: 4 LLSIYAKLGRFEEALDICREMEDSGMRRDVVTYNALLGGYGKQGKYDEVRALFDEMKAQKVSPNLLTYSTMIDVYSKGGLYDEAMDVFREFKWAGLKADVVLYSALIDALCKNGLVESAV 363 LL++ +K G +E A + EM + G+ +D+ TYN LL K G+ D + EM A+ + PN++TYSTMID Y+K G D+A ++F E K+ G+ D V Y+ L+ K G E A+ Sbjct: 305 LLAVCSKGGLWEAARSLSCEMVNRGIDQDIFTYNTLLDAVCKGGQLDMAFEIMSEMPAKNILPNVVTYSTMIDGYAKAGRLDDARNLFNEMKFLGISLDRVSYNTLLSIYAKLGRFEEAM 424 HSP 4 Score: 81.2629 bits (199), Expect = 3.494e-15 Identity = 42/120 (35.00%), Postives = 74/120 (61.67%), Query Frame = -1 Query: 7 LLSIYAKLGRFEEALDICREMEDSGMRRDVVTYNALLGGYGKQG-KYDEVRALFDEMKAQKVSPNLLTYSTMIDVYSKGGLYDEAMDVFREFKWAGLKADVVLYSALIDALCKNGLVESA 363 ++S Y + G EA+ I M+D G++ ++VTYNA++ GK G ++ V +FDEM + P+ +T+++++ V SKGGL++ A + E G+ D+ Y+ L+DA+CK G ++ A Sbjct: 234 IISAYGRSGYCNEAIKIFYSMKDYGLKPNLVTYNAVIDACGKGGVEFKRVLEIFDEMLRNGMQPDRITFNSLLAVCSKGGLWEAARSLSCEMVNRGIDQDIFTYNTLLDAVCKGGQLDMA 353 HSP 5 Score: 70.0922 bits (170), Expect = 2.803e-11 Identity = 37/109 (33.94%), Postives = 61/109 (55.96%), Query Frame = -1 Query: 7 FEEALDICREMEDSGMRRDVVTYNALLGGYGKQGKYDEVRALFDEMKAQKVSPNLLTYSTMIDVYSKGGLYDEAMDVFREFKWAGLKADVVLYSALIDALCKNGLVESA 333 F+ L+I EM +GM+ D +T+N+LL K G ++ R+L EM + + ++ TY+T++D KGG D A ++ E + +VV YS +ID K G ++ A Sbjct: 280 FKRVLEIFDEMLRNGMQPDRITFNSLLAVCSKGGLWEAARSLSCEMVNRGIDQDIFTYNTLLDAVCKGGQLDMAFEIMSEMPAKNILPNVVTYSTMIDGYAKAGRLDDA 388 HSP 6 Score: 67.3958 bits (163), Expect = 2.015e-10 Identity = 29/86 (33.72%), Postives = 54/86 (62.79%), Query Frame = -1 Query: 106 LLSIYAKLGRFEEALDICREMEDSGMRRDVVTYNALLGGYGKQGKYDEVRALFDEMKAQKVSPNLLTYSTMIDVYSKGGLYDEAMD 363 L+ +Y+K G + EA+D+ RE + +G++ DVV Y+AL+ K G + +L DEM + + PN++TY+++ID + + + +D Sbjct: 480 LIDVYSKGGLYREAMDVFREFKKAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRPATTESVVD 565 HSP 7 Score: 66.6254 bits (161), Expect = 4.425e-10 Identity = 36/122 (29.51%), Postives = 66/122 (54.10%), Query Frame = -1 Query: 1 LLSIYAKLGRFEEALDICREMEDSGMRRDVVTYNALLGGYGKQGKYDEVRALFDEMKAQKVSPNLLTYSTMIDVYSKGGL-YDEAMDVFREFKWAGLKADVVLYSALIDALCKNGLVESAVS 363 ++S +LG+ E A + + G V ++A++ YG+ G +E +F MK + PNL+TY+ +ID KGG+ + +++F E G++ D + +++L+ K GL E+A S Sbjct: 199 MISTLGRLGKVEMAKTVFKAALTEGYGNTVYAFSAIISAYGRSGYCNEAIKIFYSMKDYGLKPNLVTYNAVIDACGKGGVEFKRVLEIFDEMLRNGMQPDRITFNSLLAVCSKGGLWEAARS 320
BLAST of g.arboreum_cottongen_reftransV1_0010846 vs. ExPASy TrEMBL
Match: U5GLV2_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0002s19470g PE=4 SV=1) HSP 1 Score: 218.779 bits (556), Expect = 6.062e-64 Identity = 106/121 (87.60%), Postives = 115/121 (95.04%), Query Frame = -1 Query: 1 LLSIYAKLGRFEEALDICREMEDSGMRRDVVTYNALLGGYGKQGKYDEVRALFDEMKAQKVSPNLLTYSTMIDVYSKGGLYDEAMDVFREFKWAGLKADVVLYSALIDALCKNGLVESAVS 363 LLSIYAKLGRFEEA+D+CREME+SG+R+DVVTYNALLGGYGKQ KYD VR +F+EMKA+ VSPNLLTYST+IDVYSKGGLY EAMDVFREFK AGLKADVVLYSALIDALCKNGLVESAVS Sbjct: 410 LLSIYAKLGRFEEAMDVCREMENSGIRKDVVTYNALLGGYGKQYKYDVVRKVFEEMKARHVSPNLLTYSTLIDVYSKGGLYREAMDVFREFKKAGLKADVVLYSALIDALCKNGLVESAVS 530 HSP 2 Score: 88.1965 bits (217), Expect = 1.661e-17 Identity = 43/107 (40.19%), Postives = 71/107 (66.36%), Query Frame = -1 Query: 43 LLSIYAKLGRFEEALDICREMEDSGMRRDVVTYNALLGGYGKQGKYDEVRALFDEMKAQKVSPNLLTYSTMIDVYSKGGLYDEAMDVFREFKWAGLKADVVLYSALI 363 LL K G+ + A +I EM + +VVTY+ ++ GY K G+ D+ R LF+EMK +S + ++Y+T++ +Y+K G ++EAMDV RE + +G++ DVV Y+AL+ Sbjct: 340 LLDAVCKGGQLDMAFEIMSEMPAKNILPNVVTYSTMIDGYAKAGRLDDARNLFNEMKFLGISLDRVSYNTLLSIYAKLGRFEEAMDVCREMENSGIRKDVVTYNALL 446 HSP 3 Score: 87.4261 bits (215), Expect = 3.217e-17 Identity = 47/120 (39.17%), Postives = 71/120 (59.17%), Query Frame = -1 Query: 4 LLSIYAKLGRFEEALDICREMEDSGMRRDVVTYNALLGGYGKQGKYDEVRALFDEMKAQKVSPNLLTYSTMIDVYSKGGLYDEAMDVFREFKWAGLKADVVLYSALIDALCKNGLVESAV 363 LL++ +K G +E A + EM + G+ +D+ TYN LL K G+ D + EM A+ + PN++TYSTMID Y+K G D+A ++F E K+ G+ D V Y+ L+ K G E A+ Sbjct: 305 LLAVCSKGGLWEAARSLSCEMVNRGIDQDIFTYNTLLDAVCKGGQLDMAFEIMSEMPAKNILPNVVTYSTMIDGYAKAGRLDDARNLFNEMKFLGISLDRVSYNTLLSIYAKLGRFEEAM 424 HSP 4 Score: 81.6481 bits (200), Expect = 3.199e-15 Identity = 42/120 (35.00%), Postives = 74/120 (61.67%), Query Frame = -1 Query: 7 LLSIYAKLGRFEEALDICREMEDSGMRRDVVTYNALLGGYGKQG-KYDEVRALFDEMKAQKVSPNLLTYSTMIDVYSKGGLYDEAMDVFREFKWAGLKADVVLYSALIDALCKNGLVESA 363 ++S Y + G EA+ I M+D G++ ++VTYNA++ GK G ++ V +FDEM + P+ +T+++++ V SKGGL++ A + E G+ D+ Y+ L+DA+CK G ++ A Sbjct: 234 IISAYGRSGYCNEAIKIFYSMKDYGLKPNLVTYNAVIDACGKGGVEFKRVLEIFDEMLRNGMQPDRITFNSLLAVCSKGGLWEAARSLSCEMVNRGIDQDIFTYNTLLDAVCKGGQLDMA 353 HSP 5 Score: 70.0922 bits (170), Expect = 2.589e-11 Identity = 37/109 (33.94%), Postives = 61/109 (55.96%), Query Frame = -1 Query: 7 FEEALDICREMEDSGMRRDVVTYNALLGGYGKQGKYDEVRALFDEMKAQKVSPNLLTYSTMIDVYSKGGLYDEAMDVFREFKWAGLKADVVLYSALIDALCKNGLVESA 333 F+ L+I EM +GM+ D +T+N+LL K G ++ R+L EM + + ++ TY+T++D KGG D A ++ E + +VV YS +ID K G ++ A Sbjct: 280 FKRVLEIFDEMLRNGMQPDRITFNSLLAVCSKGGLWEAARSLSCEMVNRGIDQDIFTYNTLLDAVCKGGQLDMAFEIMSEMPAKNILPNVVTYSTMIDGYAKAGRLDDA 388 HSP 6 Score: 67.3958 bits (163), Expect = 1.915e-10 Identity = 29/86 (33.72%), Postives = 54/86 (62.79%), Query Frame = -1 Query: 106 LLSIYAKLGRFEEALDICREMEDSGMRRDVVTYNALLGGYGKQGKYDEVRALFDEMKAQKVSPNLLTYSTMIDVYSKGGLYDEAMD 363 L+ +Y+K G + EA+D+ RE + +G++ DVV Y+AL+ K G + +L DEM + + PN++TY+++ID + + + +D Sbjct: 480 LIDVYSKGGLYREAMDVFREFKKAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRPATTESVVD 565 HSP 7 Score: 66.6254 bits (161), Expect = 3.828e-10 Identity = 36/122 (29.51%), Postives = 66/122 (54.10%), Query Frame = -1 Query: 1 LLSIYAKLGRFEEALDICREMEDSGMRRDVVTYNALLGGYGKQGKYDEVRALFDEMKAQKVSPNLLTYSTMIDVYSKGGL-YDEAMDVFREFKWAGLKADVVLYSALIDALCKNGLVESAVS 363 ++S +LG+ E A + + G V ++A++ YG+ G +E +F MK + PNL+TY+ +ID KGG+ + +++F E G++ D + +++L+ K GL E+A S Sbjct: 199 MISTLGRLGKVEMAKTVFKAALTEGYGNTVYAFSAIISAYGRSGYCNEAIKIFYSMKDYGLKPNLVTYNAVIDACGKGGVEFKRVLEIFDEMLRNGMQPDRITFNSLLAVCSKGGLWEAARS 320
BLAST of g.arboreum_cottongen_reftransV1_0010846 vs. ExPASy TrEMBL
Match: B9I9H0_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0014s11380g PE=4 SV=2) HSP 1 Score: 216.853 bits (551), Expect = 2.570e-63 Identity = 105/121 (86.78%), Postives = 114/121 (94.21%), Query Frame = -1 Query: 1 LLSIYAKLGRFEEALDICREMEDSGMRRDVVTYNALLGGYGKQGKYDEVRALFDEMKAQKVSPNLLTYSTMIDVYSKGGLYDEAMDVFREFKWAGLKADVVLYSALIDALCKNGLVESAVS 363 LLSIYAKLGRF+EALD+CREME+ G+R+DVVTYNALLGGYGKQ KYDEVR +F EMKA +VSPNLLTYST+IDVYSKGGLY EAMDVFREFK AGLKADVVLYSA+IDALCKNGLVESAVS Sbjct: 412 LLSIYAKLGRFQEALDVCREMENCGIRKDVVTYNALLGGYGKQCKYDEVRRVFGEMKAGRVSPNLLTYSTLIDVYSKGGLYREAMDVFREFKKAGLKADVVLYSAVIDALCKNGLVESAVS 532 HSP 2 Score: 85.8853 bits (211), Expect = 9.512e-17 Identity = 44/120 (36.67%), Postives = 72/120 (60.00%), Query Frame = -1 Query: 4 LLSIYAKLGRFEEALDICREMEDSGMRRDVVTYNALLGGYGKQGKYDEVRALFDEMKAQKVSPNLLTYSTMIDVYSKGGLYDEAMDVFREFKWAGLKADVVLYSALIDALCKNGLVESAV 363 LL++ ++ G +E A + EM + G+ +D+ TYN LL K G+ D + EM A+ + PN++TYSTMID Y+K G +D+A+++F E K+ + D V Y+ L+ K G + A+ Sbjct: 307 LLAVCSRGGLWEAARSLSSEMLNRGIDQDIFTYNTLLDAVCKGGQMDMAFEIMSEMPAKNILPNVVTYSTMIDGYAKAGRFDDALNLFNEMKFLCISLDRVSYNTLLSIYAKLGRFQEAL 426 HSP 3 Score: 83.5741 bits (205), Expect = 6.504e-16 Identity = 41/107 (38.32%), Postives = 69/107 (64.49%), Query Frame = -1 Query: 43 LLSIYAKLGRFEEALDICREMEDSGMRRDVVTYNALLGGYGKQGKYDEVRALFDEMKAQKVSPNLLTYSTMIDVYSKGGLYDEAMDVFREFKWAGLKADVVLYSALI 363 LL K G+ + A +I EM + +VVTY+ ++ GY K G++D+ LF+EMK +S + ++Y+T++ +Y+K G + EA+DV RE + G++ DVV Y+AL+ Sbjct: 342 LLDAVCKGGQMDMAFEIMSEMPAKNILPNVVTYSTMIDGYAKAGRFDDALNLFNEMKFLCISLDRVSYNTLLSIYAKLGRFQEALDVCREMENCGIRKDVVTYNALL 448 HSP 4 Score: 80.1073 bits (196), Expect = 9.057e-15 Identity = 40/120 (33.33%), Postives = 74/120 (61.67%), Query Frame = -1 Query: 7 LLSIYAKLGRFEEALDICREMEDSGMRRDVVTYNALLGGYGKQG-KYDEVRALFDEMKAQKVSPNLLTYSTMIDVYSKGGLYDEAMDVFREFKWAGLKADVVLYSALIDALCKNGLVESA 363 ++S Y + G +EA+ + M+ G++ ++VTYNA++ GK G ++ V +FDEM V P+ +T+++++ V S+GGL++ A + E G+ D+ Y+ L+DA+CK G ++ A Sbjct: 236 IISAYGRSGYCDEAIKVFDSMKHYGLKPNLVTYNAVIDACGKGGVEFKRVVEIFDEMLRNGVQPDRITFNSLLAVCSRGGLWEAARSLSSEMLNRGIDQDIFTYNTLLDAVCKGGQMDMA 355 HSP 5 Score: 68.1662 bits (165), Expect = 1.022e-10 Identity = 37/122 (30.33%), Postives = 66/122 (54.10%), Query Frame = -1 Query: 1 LLSIYAKLGRFEEALDICREMEDSGMRRDVVTYNALLGGYGKQGKYDEVRALFDEMKAQKVSPNLLTYSTMIDVYSKGGL-YDEAMDVFREFKWAGLKADVVLYSALIDALCKNGLVESAVS 363 ++S +LG+ E A + G V ++A++ YG+ G DE +FD MK + PNL+TY+ +ID KGG+ + +++F E G++ D + +++L+ + GL E+A S Sbjct: 201 MISTLGRLGKVEIAKSVFEAALIEGYGNTVYAFSAIISAYGRSGYCDEAIKVFDSMKHYGLKPNLVTYNAVIDACGKGGVEFKRVVEIFDEMLRNGVQPDRITFNSLLAVCSRGGLWEAARS 322 HSP 6 Score: 67.781 bits (164), Expect = 1.619e-10 Identity = 28/86 (32.56%), Postives = 55/86 (63.95%), Query Frame = -1 Query: 106 LLSIYAKLGRFEEALDICREMEDSGMRRDVVTYNALLGGYGKQGKYDEVRALFDEMKAQKVSPNLLTYSTMIDVYSKGGLYDEAMD 363 L+ +Y+K G + EA+D+ RE + +G++ DVV Y+A++ K G + +L DEM + + PN++TY+++ID + + + + +D Sbjct: 482 LIDVYSKGGLYREAMDVFREFKKAGLKADVVLYSAVIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSAITESVVD 567 HSP 7 Score: 67.0106 bits (162), Expect = 2.685e-10 Identity = 34/111 (30.63%), Postives = 62/111 (55.86%), Query Frame = -1 Query: 1 FEEALDICREMEDSGMRRDVVTYNALLGGYGKQGKYDEVRALFDEMKAQKVSPNLLTYSTMIDVYSKGGLYDEAMDVFREFKWAGLKADVVLYSALIDALCKNGLVESAVS 333 F+ ++I EM +G++ D +T+N+LL + G ++ R+L EM + + ++ TY+T++D KGG D A ++ E + +VV YS +ID K G + A++ Sbjct: 282 FKRVVEIFDEMLRNGVQPDRITFNSLLAVCSRGGLWEAARSLSSEMLNRGIDQDIFTYNTLLDAVCKGGQMDMAFEIMSEMPAKNILPNVVTYSTMIDGYAKAGRFDDALN 392
BLAST of g.arboreum_cottongen_reftransV1_0010846 vs. ExPASy Swiss-Prot
Match: PP178_ARATH (Pentatricopeptide repeat-containing protein At2g31400, chloroplastic OS=Arabidopsis thaliana GN=At2g31400 PE=2 SV=1) HSP 1 Score: 196.052 bits (497), Expect = 1.203e-57 Identity = 95/121 (78.51%), Postives = 106/121 (87.60%), Query Frame = -1 Query: 1 LLSIYAKLGRFEEALDICREMEDSGMRRDVVTYNALLGGYGKQGKYDEVRALFDEMKAQKVSPNLLTYSTMIDVYSKGGLYDEAMDVFREFKWAGLKADVVLYSALIDALCKNGLVESAVS 363 LLSIY K+GR EEALDI REM G+++DVVTYNALLGGYGKQGKYDEV+ +F EMK + V PNLLTYST+ID YSKGGLY EAM++FREFK AGL+ADVVLYSALIDALCKNGLV SAVS Sbjct: 450 LLSIYTKVGRSEEALDILREMASVGIKKDVVTYNALLGGYGKQGKYDEVKKVFTEMKREHVLPNLLTYSTLIDGYSKGGLYKEAMEIFREFKSAGLRADVVLYSALIDALCKNGLVGSAVS 570 HSP 2 Score: 91.2781 bits (225), Expect = 1.432e-20 Identity = 44/120 (36.67%), Postives = 78/120 (65.00%), Query Frame = -1 Query: 7 LLSIYAKLGRFEEALDICREMEDSGMRRDVVTYNALLGGYGKQG-KYDEVRALFDEMKAQKVSPNLLTYSTMIDVYSKGGLYDEAMDVFREFKWAGLKADVVLYSALIDALCKNGLVESA 363 L+S Y + G EEA+ + M++ G+R ++VTYNA++ GK G ++ +V FDEM+ V P+ +T+++++ V S+GGL++ A ++F E ++ DV Y+ L+DA+CK G ++ A Sbjct: 274 LISAYGRSGLHEEAISVFNSMKEYGLRPNLVTYNAVIDACGKGGMEFKQVAKFFDEMQRNGVQPDRITFNSLLAVCSRGGLWEAARNLFDEMTNRRIEQDVFSYNTLLDAICKGGQMDLA 393 HSP 3 Score: 81.6481 bits (200), Expect = 3.166e-17 Identity = 40/120 (33.33%), Postives = 73/120 (60.83%), Query Frame = -1 Query: 4 LLSIYAKLGRFEEALDICREMEDSGMRRDVVTYNALLGGYGKQGKYDEVRALFDEMKAQKVSPNLLTYSTMIDVYSKGGLYDEAMDVFREFKWAGLKADVVLYSALIDALCKNGLVESAV 363 LL++ ++ G +E A ++ EM + + +DV +YN LL K G+ D + +M +++ PN+++YST+ID ++K G +DEA+++F E ++ G+ D V Y+ L+ K G E A+ Sbjct: 345 LLAVCSRGGLWEAARNLFDEMTNRRIEQDVFSYNTLLDAICKGGQMDLAFEILAQMPVKRIMPNVVSYSTVIDGFAKAGRFDEALNLFGEMRYLGIALDRVSYNTLLSIYTKVGRSEEAL 464 HSP 4 Score: 80.8777 bits (198), Expect = 7.464e-17 Identity = 39/114 (34.21%), Postives = 69/114 (60.53%), Query Frame = -1 Query: 22 LLSIYAKLGRFEEALDICREMEDSGMRRDVVTYNALLGGYGKQGKYDEVRALFDEMKAQKVSPNLLTYSTMIDVYSKGGLYDEAMDVFREFKWAGLKADVVLYSALIDALCKNG 363 LL K G+ + A +I +M + +VV+Y+ ++ G+ K G++DE LF EM+ ++ + ++Y+T++ +Y+K G +EA+D+ RE G+K DVV Y+AL+ K G Sbjct: 380 LLDAICKGGQMDLAFEILAQMPVKRIMPNVVSYSTVIDGFAKAGRFDEALNLFGEMRYLGIALDRVSYNTLLSIYTKVGRSEEALDILREMASVGIKKDVVTYNALLGGYGKQG 493 HSP 5 Score: 71.2478 bits (173), Expect = 1.435e-13 Identity = 32/86 (37.21%), Postives = 54/86 (62.79%), Query Frame = -1 Query: 106 LLSIYAKLGRFEEALDICREMEDSGMRRDVVTYNALLGGYGKQGKYDEVRALFDEMKAQKVSPNLLTYSTMIDVYSKGGLYDEAMD 363 L+ Y+K G ++EA++I RE + +G+R DVV Y+AL+ K G +L DEM + +SPN++TY+++ID + + D + D Sbjct: 520 LIDGYSKGGLYKEAMEIFREFKSAGLRADVVLYSALIDALCKNGLVGSAVSLIDEMTKEGISPNVVTYNSIIDAFGRSATMDRSAD 605 HSP 6 Score: 70.0922 bits (170), Expect = 2.991e-13 Identity = 33/111 (29.73%), Postives = 63/111 (56.76%), Query Frame = -1 Query: 1 FEEALDICREMEDSGMRRDVVTYNALLGGYGKQGKYDEVRALFDEMKAQKVSPNLLTYSTMIDVYSKGGLYDEAMDVFREFKWAGLKADVVLYSALIDALCKNGLVESAVS 333 F++ EM+ +G++ D +T+N+LL + G ++ R LFDEM +++ ++ +Y+T++D KGG D A ++ + + +VV YS +ID K G + A++ Sbjct: 320 FKQVAKFFDEMQRNGVQPDRITFNSLLAVCSRGGLWEAARNLFDEMTNRRIEQDVFSYNTLLDAICKGGQMDLAFEILAQMPVKRIMPNVVSYSTVIDGFAKAGRFDEALN 430 HSP 7 Score: 64.6994 bits (156), Expect = 2.156e-11 Identity = 34/120 (28.33%), Postives = 64/120 (53.33%), Query Frame = -1 Query: 7 LLSIYAKLGRFEEALDICREMEDSGMRRDVVTYNALLGGYGKQGKYDEVRALFDEMKAQKVSPNLLTYSTMIDVYSKGGL-YDEAMDVFREFKWAGLKADVVLYSALIDALCKNGLVESA 363 ++S + G+ A I G V ++AL+ YG+ G ++E ++F+ MK + PNL+TY+ +ID KGG+ + + F E + G++ D + +++L+ + GL E+A Sbjct: 239 MISTLGRYGKVTIAKRIFETAFAGGYGNTVYAFSALISAYGRSGLHEEAISVFNSMKEYGLRPNLVTYNAVIDACGKGGMEFKQVAKFFDEMQRNGVQPDRITFNSLLAVCSRGGLWEAA 358 HSP 8 Score: 53.9138 bits (128), Expect = 8.803e-8 Identity = 26/82 (31.71%), Postives = 46/82 (56.10%), Query Frame = -1 Query: 19 NALLGGYGKQGKYDEVRALFDEMKAQKVSPNLLTYSTMIDVYSKGGLYDEAMDVFREFKWAGLKADVVLYSALIDALCKNGL 264 +A++ G+ GK + +F+ A + +S +I Y + GL++EA+ VF K GL+ ++V Y+A+IDA K G+ Sbjct: 237 SAMISTLGRYGKVTIAKRIFETAFAGGYGNTVYAFSALISAYGRSGLHEEAISVFNSMKEYGLRPNLVTYNAVIDACGKGGM 318
BLAST of g.arboreum_cottongen_reftransV1_0010846 vs. ExPASy Swiss-Prot
Match: PP143_ARATH (Putative pentatricopeptide repeat-containing protein At2g02150 OS=Arabidopsis thaliana GN=At2g02150 PE=3 SV=1) HSP 1 Score: 93.9745 bits (232), Expect = 1.743e-21 Identity = 44/120 (36.67%), Postives = 72/120 (60.00%), Query Frame = -1 Query: 4 LLSIYAKLGRFEEALDICREMEDSGMRRDVVTYNALLGGYGKQGKYDEVRALFDEMKAQKVSPNLLTYSTMIDVYSKGGLYDEAMDVFREFKWAGLKADVVLYSALIDALCKNGLVESAV 363 ++ K G E A + EM+ G+ D VTYN+++ G+GK G+ D+ F+EMK P+++TY+ +I+ + K G ++ +RE K GLK +VV YS L+DA CK G+++ A+ Sbjct: 268 MIDCMCKEGDVEAARGLFEEMKFRGLVPDTVTYNSMIDGFGKVGRLDDTVCFFEEMKDMCCEPDVITYNALINCFCKFGKLPIGLEFYREMKGNGLKPNVVSYSTLVDAFCKEGMMQQAI 387 HSP 2 Score: 80.8777 bits (198), Expect = 4.897e-17 Identity = 42/114 (36.84%), Postives = 67/114 (58.77%), Query Frame = -1 Query: 22 LLSIYAKLGRFEEALDICREMEDSGMRRDVVTYNALLGGYGKQGKYDEVRALFDEMKAQKVSPNLLTYSTMIDVYSKGGLYDEAMDVFREFKWAGLKADVVLYSALIDALCKNG 363 LL +AKLG+ ++ ++M +G R V TYN ++ K+G + R LF+EMK + + P+ +TY++MID + K G D+ + F E K + DV+ Y+ALI+ CK G Sbjct: 233 LLHRFAKLGKTDDVKRFFKDMIGAGARPTVFTYNIMIDCMCKEGDVEAARGLFEEMKFRGLVPDTVTYNSMIDGFGKVGRLDDTVCFFEEMKDMCCEPDVITYNALINCFCKFG 346 HSP 3 Score: 79.337 bits (194), Expect = 1.832e-16 Identity = 39/115 (33.91%), Postives = 66/115 (57.39%), Query Frame = -1 Query: 7 YAKLGRFEEALDICREMEDSGMRRDVVTYNALLGGYGKQGKYDEVRALFDEMKAQKVSPNLLTYSTMIDVYSKGGLYDEAMDVFREFKWAGLKADVVLYSALIDALCKNGLVESA 351 + K+GR ++ + EM+D DV+TYNAL+ + K GK + EMK + PN+++YST++D + K G+ +A+ + + + GL + Y++LIDA CK G + A Sbjct: 307 FGKVGRLDDTVCFFEEMKDMCCEPDVITYNALINCFCKFGKLPIGLEFYREMKGNGLKPNVVSYSTLVDAFCKEGMMQQAIKFYVDMRRVGLVPNEYTYTSLIDANCKIGNLSDA 421 HSP 4 Score: 70.8626 bits (172), Expect = 1.732e-13 Identity = 35/111 (31.53%), Postives = 64/111 (57.66%), Query Frame = -1 Query: 31 LLSIYAKLGRFEEALDICREMEDSGMRRDVVTYNALLGGYGKQGKYDEVRALFDEMKAQKVSPNLLTYSTMIDVYSKGGLYDEAMDVFREFKWAGLKADVVLYSALIDALC 363 L++ + K G+ L+ REM+ +G++ +VV+Y+ L+ + K+G + + +M+ + PN TY+++ID K G +A + E G++ +VV Y+ALID LC Sbjct: 338 LINCFCKFGKLPIGLEFYREMKGNGLKPNVVSYSTLVDAFCKEGMMQQAIKFYVDMRRVGLVPNEYTYTSLIDANCKIGNLSDAFRLGNEMLQVGVEWNVVTYTALIDGLC 448 HSP 5 Score: 69.707 bits (169), Expect = 4.286e-13 Identity = 37/120 (30.83%), Postives = 62/120 (51.67%), Query Frame = -1 Query: 4 LLSIYAKLGRFEEALDICREMEDSGMRRDVVTYNALLGGYGKQGKYDEVRALFDEMKAQKVSPNLLTYSTMIDVYSKGGLYDEAMDVFREFKWAGLKADVVLYSALIDALCKNGLVESAV 363 L+ + K + AL++ E++ G++ D++ Y + G K + + + +EMK + N L Y+T++D Y K G E + + E K ++ VV + LID LCKN LV AV Sbjct: 478 LIHGFVKAKNMDRALELLNELKGRGIKPDLLLYGTFIWGLCSLEKIEAAKVVMNEMKECGIKANSLIYTTLMDAYFKSGNPTEGLHLLDEMKELDIEVTVVTFCVLIDGLCKNKLVSKAV 597 HSP 6 Score: 69.3218 bits (168), Expect = 5.850e-13 Identity = 40/121 (33.06%), Postives = 60/121 (49.59%), Query Frame = -1 Query: 1 LLSIYAKLGRFEEALDICREMEDSGMRRDVVTYNALLGGYGKQGKYDEVRALFDEMKAQKVSPNLLTYSTMIDVYSKGGLYDEAMDVFREFKWAGLKADVVLYSALIDALCKNGLVESAVS 363 L S+ LG EEA+ +M+ + + N LL + K GK D+V+ F +M P + TY+ MID K G + A +F E K+ GL D V Y+++ID K G ++ V Sbjct: 198 LFSVLIDLGMLEEAIQCFSKMKRFRVFPKTRSCNGLLHRFAKLGKTDDVKRFFKDMIGAGARPTVFTYNIMIDCMCKEGDVEAARGLFEEMKFRGLVPDTVTYNSMIDGFGKVGRLDDTVC 318 HSP 7 Score: 68.9366 bits (167), Expect = 6.675e-13 Identity = 39/119 (32.77%), Postives = 60/119 (50.42%), Query Frame = -1 Query: 7 LLSIYAKLGRFEEALDICREMEDSGMRRDVVTYNALLGGYGKQGKYDEVRALFDEMKAQKVSPNLLTYSTMIDVYSKGGLYDEAMDVFREFKWAGLKADVVLYSALIDALCKNGLVESA 363 L+ K+G +A + EM G+ +VVTY AL+ G + E LF +M V PNL +Y+ +I + K D A+++ E K G+K D++LY I LC +E+A Sbjct: 408 LIDANCKIGNLSDAFRLGNEMLQVGVEWNVVTYTALIDGLCDAERMKEAEELFGKMDTAGVIPNLASYNALIHGFVKAKNMDRALELLNELKGRGIKPDLLLYGTFIWGLCSLEKIEAA 526 HSP 8 Score: 66.6254 bits (161), Expect = 3.695e-12 Identity = 37/117 (31.62%), Postives = 62/117 (52.99%), Query Frame = -1 Query: 1 AKLGRFEEALDICREMEDSGMRRDVVTYNALLGGYGKQGKYDEVRALFDEMKAQKVSPNLLTYSTMIDVYSKGGLYDEAMDVFREFKW-AGLKADVVLYSALIDALCKNGLVESAVS 348 L + E A + EM++ G++ + + Y L+ Y K G E L DEMK + ++T+ +ID K L +A+D F GL+A+ +++A+ID LCK+ VE+A + Sbjct: 518 CSLEKIEAAKVVMNEMKECGIKANSLIYTTLMDAYFKSGNPTEGLHLLDEMKELDIEVTVVTFCVLIDGLCKNKLVSKAVDYFNRISNDFGLQANAAIFTAMIDGLCKDNQVEAATT 634
BLAST of g.arboreum_cottongen_reftransV1_0010846 vs. ExPASy Swiss-Prot
Match: PP442_ARATH (Pentatricopeptide repeat-containing protein At5g61990, mitochondrial OS=Arabidopsis thaliana GN=At5g61990 PE=2 SV=1) HSP 1 Score: 93.9745 bits (232), Expect = 2.015e-21 Identity = 46/121 (38.02%), Postives = 73/121 (60.33%), Query Frame = -1 Query: 1 LLSIYAKLGRFEEALDICREMEDSGMRRDVVTYNALLGGYGKQGKYDEVRALFDEMKAQKVSPNLLTYSTMIDVYSKGGLYDEAMDVFREFKWAGLKADVVLYSALIDALCKNGLVESAVS 363 L++ ++KLG ++A I EM + G+ +V+ YN LLGG+ + G+ ++ + L DEM + + PN +TY T+ID Y K G EA +F E K GL D +Y+ L+D C+ VE A++ Sbjct: 633 LINGFSKLGNMQKASSIFDEMVEEGLTPNVIIYNMLLGGFCRSGEIEKAKELLDEMSVKGLHPNAVTYCTIIDGYCKSGDLAEAFRLFDEMKLKGLVPDSFVYTTLVDGCCRLNDVERAIT 753 HSP 2 Score: 78.1814 bits (191), Expect = 5.121e-16 Identity = 39/119 (32.77%), Postives = 66/119 (55.46%), Query Frame = -1 Query: 7 LLSIYAKLGRFEEALDICREMEDSGMRRDVVTYNALLGGYGKQGKYDEVRALFDEMKAQKVSPNLLTYSTMIDVYSKGGLYDEAMDVFREFKWAGLKADVVLYSALIDALCKNGLVESA 363 L++ Y K G+ EA R M D G+ D TY L+ G K K D+ +F EM+ + ++P++ +Y +I+ +SK G +A +F E GL +V++Y+ L+ C++G +E A Sbjct: 563 LINEYCKKGKVIEACSAYRSMVDQGILGDAKTYTVLMNGLFKNDKVDDAEEIFREMRGKGIAPDVFSYGVLINGFSKLGNMQKASSIFDEMVEEGLTPNVIIYNMLLGGFCRSGEIEKA 681 HSP 3 Score: 72.4034 bits (176), Expect = 5.385e-14 Identity = 32/105 (30.48%), Postives = 60/105 (57.14%), Query Frame = -1 Query: 22 RFEEALDICREMEDSGMRRDVVTYNALLGGYGKQGKYDEVRALFDEMKAQKVSPNLLTYSTMIDVYSKGGLYDEAMDVFREFKWAGLKADVVLYSALIDALCKNG 336 + ++A +I REM G+ DV +Y L+ G+ K G + ++FDEM + ++PN++ Y+ ++ + + G ++A ++ E GL + V Y +ID CK+G Sbjct: 607 KVDDAEEIFREMRGKGIAPDVFSYGVLINGFSKLGNMQKASSIFDEMVEEGLTPNVIIYNMLLGGFCRSGEIEKAKELLDEMSVKGLHPNAVTYCTIIDGYCKSG 711 HSP 4 Score: 69.3218 bits (168), Expect = 5.873e-13 Identity = 37/121 (30.58%), Postives = 61/121 (50.41%), Query Frame = -1 Query: 1 LLSIYAKLGRFEEALDICREMEDSGMRRDVVTYNALLGGYGKQGKYDEVRALFDEMKAQKVSPNLLTYSTMIDVYSKGGLYDEAMDVFREFKWAGLKADVVLYSALIDALCKNGLVESAVS 363 L+ + + RF +A+ + +EM++ G+ D+ YN+L+ G K + DE R+ EM + PN TY I Y + + A +E + G+ + VL + LI+ CK G V A S Sbjct: 458 LIKTFLQNSRFGDAMRVLKEMKEQGIAPDIFCYNSLIIGLSKAKRMDEARSFLVEMVENGLKPNAFTYGAFISGYIEASEFASADKYVKEMRECGVLPNKVLCTGLINEYCKKGKVIEACS 578 HSP 5 Score: 63.5438 bits (153), Expect = 5.187e-11 Identity = 35/124 (28.23%), Postives = 65/124 (52.42%), Query Frame = -1 Query: 4 LLSIYAKLGRFEEALDICREMEDSGMRR----DVVTYNALLGGYGKQGKYDEVRALFDEMKAQKVSPNLLTYSTMIDVYSKGGLYDEAMDVFREFKWAGLKADVVLYSALIDALCKNGLVESAV 363 L++ K G+ E ++ + D R + VTYN ++ K+G + + LF +M+ + P ++TY+++++ Y K G E VF E AG++ D ++YS +I+A K G+ A+ Sbjct: 772 LINWVFKFGKTELKTEVLNRLMDGSFDRFGKPNDVTYNIMIDYLCKEGNLEAAKELFHQMQNANLMPTVITYTSLLNGYDKMGRRAEMFPVFDEAIAAGIEPDHIMYSVIINAFLKEGMTTKAL 895 HSP 6 Score: 58.5362 bits (140), Expect = 2.338e-9 Identity = 36/117 (30.77%), Postives = 60/117 (51.28%), Query Frame = -1 Query: 13 LLSIYAKLGRFEEALDICREMEDSGMRRDVVTYNALLGGYGKQGKYDEVRALFDEMKAQKVSPNLLTYSTMIDVYSKGGLYDEAMDVFREFKWAGLKADVVLYSALIDALCKNGLVE 363 LL + + G E+A ++ EM G+ + VTY ++ GY K G E LFDEMK + + P+ Y+T++D + + A+ +F K G + ++ALI+ + K G E Sbjct: 668 LLGGFCRSGEIEKAKELLDEMSVKGLHPNAVTYCTIIDGYCKSGDLAEAFRLFDEMKLKGLVPDSFVYTTLVDGCCRLNDVERAITIFGTNK-KGCASSTAPFNALINWVFKFGKTE 783 HSP 7 Score: 57.3806 bits (137), Expect = 5.325e-9 Identity = 31/99 (31.31%), Postives = 50/99 (50.51%), Query Frame = -1 Query: 43 GRFEEALDICREMEDSGMRRDVVTYNALLGGYGKQGKYDEVRALFDEMKAQKVSPNLLTYSTMIDVYSKGGLYDEAMDVFREFKWAGLKADVVLYSALI 339 G + A +I +EM SG R +VV Y L+ + + ++ + + EMK Q ++P++ Y+++I SK DEA E GLK + Y A I Sbjct: 431 GDLDGAYNIVKEMIASGCRPNVVIYTTLIKTFLQNSRFGDAMRVLKEMKEQGIAPDIFCYNSLIIGLSKAKRMDEARSFLVEMVENGLKPNAFTYGAFI 529 HSP 8 Score: 54.299 bits (129), Expect = 6.350e-8 Identity = 33/114 (28.95%), Postives = 55/114 (48.25%), Query Frame = -1 Query: 7 AKLGRFEEALDICREMEDSGMRRDVVTYNALLGGYGKQGKYDEVRALFDEMKAQKVSPNLLTYSTMIDVYSKGGLYDEAMDVFREFKWAGLKADVVLYSALIDALCKNGLVESA 348 +K R +EA EM ++G++ + TY A + GY + ++ EM+ V PN + + +I+ Y K G EA +R G+ D Y+ L++ L KN V+ A Sbjct: 498 SKAKRMDEARSFLVEMVENGLKPNAFTYGAFISGYIEASEFASADKYVKEMRECGVLPNKVLCTGLINEYCKKGKVIEACSAYRSMVDQGILGDAKTYTVLMNGLFKNDKVDDA 611 HSP 9 Score: 52.7582 bits (125), Expect = 1.975e-7 Identity = 31/121 (25.62%), Postives = 56/121 (46.28%), Query Frame = -1 Query: 1 LLSIYAKLGRFEEALDICREMEDSGMRRDVVTYNALLGGYGKQGKYDEVRALFDEMKAQKVSPNLLTYSTMIDVYSKGGLYDEAMDVFREFKWAGLKADVVLYSALIDALCKNGLVESAVS 363 L+ Y + + ++ EM+ + TY ++ G G D + EM A PN++ Y+T+I + + + +AM V +E K G+ D+ Y++LI L K ++ A S Sbjct: 388 LIEGYCREKNVRQGYELLVEMKKRNIVISPYTYGTVVKGMCSSGDLDGAYNIVKEMIASGCRPNVVIYTTLIKTFLQNSRFGDAMRVLKEMKEQGIAPDIFCYNSLIIGLSKAKRMDEARS 508 HSP 10 Score: 52.373 bits (124), Expect = 2.679e-7 Identity = 34/121 (28.10%), Postives = 58/121 (47.93%), Query Frame = -1 Query: 1 LLSIYAKLGRFEEALDICREMEDSGMRRDVVTYNALLGGYGKQGKYDEVRALFDEMKAQKVSPNLLTYSTMIDVYSKGGLYDEAMDVFREFKWAGLKADVVLYSALIDALCKNGLVESAVS 363 +S Y + F A +EM + G+ + V L+ Y K+GK E + + M Q + + TY+ +++ K D+A ++FRE + G+ DV Y LI+ K G ++ A S Sbjct: 528 FISGYIEASEFASADKYVKEMRECGVLPNKVLCTGLINEYCKKGKVIEACSAYRSMVDQGILGDAKTYTVLMNGLFKNDKVDDAEEIFREMRGKGIAPDVFSYGVLINGFSKLGNMQKASS 648
BLAST of g.arboreum_cottongen_reftransV1_0010846 vs. ExPASy Swiss-Prot
Match: PP413_ARATH (Pentatricopeptide repeat-containing protein At5g42310, mitochondrial OS=Arabidopsis thaliana GN=At5g42310 PE=2 SV=1) HSP 1 Score: 93.2041 bits (230), Expect = 2.904e-21 Identity = 44/121 (36.36%), Postives = 74/121 (61.16%), Query Frame = -1 Query: 1 LLSIYAKLGRFEEALDICREMEDSGMRRDVVTYNALLGGYGKQGKYDEVRALFDEMKAQKVSPNLLTYSTMIDVYSKGGLYDEAMDVFREFKWAGLKADVVLYSALIDALCKNGLVESAVS 363 L+ + K GR A ++ ME G TYN ++ YG Q ++D+++ L +MK+Q + PN++T++T++DVY K G +++A++ E K GLK +Y+ALI+A + GL E AV+ Sbjct: 485 LIDCHCKHGRHIVAEEMFEAMERRGCLPCATTYNIMINSYGDQERWDDMKRLLGKMKSQGILPNVVTHTTLVDVYGKSGRFNDAIECLEEMKSVGLKPSSTMYNALINAYAQRGLSEQAVN 605 HSP 2 Score: 69.707 bits (169), Expect = 3.829e-13 Identity = 35/114 (30.70%), Postives = 60/114 (52.63%), Query Frame = -1 Query: 22 LLSIYAKLGRFEEALDICREMEDSGMRRDVVTYNALLGGYGKQGKYDEVRALFDEMKAQKVSPNLLTYSTMIDVYSKGGLYDEAMDVFREFKWAGLKADVVLYSALIDALCKNG 363 L+ Y GR+E A + +EME ++ + ++ LL G+ +G++ + + EMK+ V P+ Y+ +ID + K D AM F G++ D V ++ LID CK+G Sbjct: 380 LIDAYVNAGRWESARIVLKEMEAGDVQPNSFVFSRLLAGFRDRGEWQKTFQVLKEMKSIGVKPDRQFYNVVIDTFGKFNCLDHAMTTFDRMLSEGIEPDRVTWNTLIDCHCKHG 493 HSP 3 Score: 68.9366 bits (167), Expect = 6.140e-13 Identity = 35/112 (31.25%), Postives = 62/112 (55.36%), Query Frame = -1 Query: 28 LLSIYAKLGRFEEALDICREMEDSGMRRDVVTYNALLGGYGKQGKYDEVRALFDEMKAQKVSPNLLTYSTMIDVYSKGGLYDEAMDVFREFKWAGLKADVVLYSALIDALCK 363 L+ +Y K GRF +A++ EM+ G++ YNAL+ Y ++G ++ F M + + P+LL +++I+ + + EA V + K G+K DVV Y+ L+ AL + Sbjct: 555 LVDVYGKSGRFNDAIECLEEMKSVGLKPSSTMYNALINAYAQRGLSEQAVNAFRVMTSDGLKPSLLALNSLINAFGEDRRDAEAFAVLQYMKENGVKPDVVTYTTLMKALIR 666 HSP 4 Score: 67.0106 bits (162), Expect = 2.747e-12 Identity = 36/121 (29.75%), Postives = 61/121 (50.41%), Query Frame = -1 Query: 1 LLSIYAKLGRFEEALDICREMEDSGMRRDVVTYNALLGGYGKQGKYDEVRALFDEMKAQKVSPNLLTYSTMIDVYSKGGLYDEAMDVFREFKWAGLKADVVLYSALIDALCKNGLVESAVS 363 LL Y K G ++A + EME G+ D TY+ L+ Y G+++ R + EM+A V PN +S ++ + G + + V +E K G+K D Y+ +ID K ++ A++ Sbjct: 345 LLKGYVKTGPLKDAESMVSEMEKRGVSPDEHTYSLLIDAYVNAGRWESARIVLKEMEAGDVQPNSFVFSRLLAGFRDRGEWQKTFQVLKEMKSIGVKPDRQFYNVVIDTFGKFNCLDHAMT 465 HSP 5 Score: 64.3142 bits (155), Expect = 2.536e-11 Identity = 35/107 (32.71%), Postives = 58/107 (54.21%), Query Frame = -1 Query: 43 LLSIYAKLGRFEEALDICREMEDSGMRRDVVTYNALLGGYGKQGKYDEVRALFDEMKAQKVSPNLLTYSTMIDVYSKGGLYDEAMDVFREFKWAGLKADVVLYSALI 363 ++S A GR EA + E+ SG++ YNALL GY K G + ++ EM+ + VSP+ TYS +ID Y G ++ A V +E + ++ + ++S L+ Sbjct: 310 IISALADSGRTLEAEALFEELRQSGIKPRTRAYNALLKGYVKTGPLKDAESMVSEMEKRGVSPDEHTYSLLIDAYVNAGRWESARIVLKEMEAGDVQPNSFVFSRLL 416 HSP 6 Score: 62.7734 bits (151), Expect = 7.213e-11 Identity = 30/110 (27.27%), Postives = 65/110 (59.09%), Query Frame = -1 Query: 34 LLSIYAKLGRFEEALDICREMEDSGMRRDVVTYNALLGGYGKQGKYDEVRALFDEMKAQKVSPNLLTYSTMIDVYSKGGLYDEAMDVFREFKWAGLKADVVLYSALIDAL 363 +++ Y R+++ + +M+ G+ +VVT+ L+ YGK G++++ +EMK+ + P+ Y+ +I+ Y++ GL ++A++ FR GLK ++ ++LI+A Sbjct: 520 MINSYGDQERWDDMKRLLGKMKSQGILPNVVTHTTLVDVYGKSGRFNDAIECLEEMKSVGLKPSSTMYNALINAYAQRGLSEQAVNAFRVMTSDGLKPSLLALNSLINAF 629 HSP 7 Score: 55.0694 bits (131), Expect = 2.944e-8 Identity = 27/109 (24.77%), Postives = 57/109 (52.29%), Query Frame = -1 Query: 37 LLSIYAKLGRFEEALDICREMEDSGMRRDVVTYNALLGGYGKQGKYDEVRALFDEMKAQKVSPNLLTYSTMIDVYSKGGLYDEAMDVFREFKWAGLKADVVLYSALIDA 363 LL+ + G +++ + +EM+ G++ D YN ++ +GK D FD M ++ + P+ +T++T+ID + K G + A ++F + G Y+ +I++ Sbjct: 415 LLAGFRDRGEWQKTFQVLKEMKSIGVKPDRQFYNVVIDTFGKFNCLDHAMTTFDRMLSEGIEPDRVTWNTLIDCHCKHGRHIVAEEMFEAMERRGCLPCATTYNIMINS 523 HSP 8 Score: 51.6026 bits (122), Expect = 4.531e-7 Identity = 32/115 (27.83%), Postives = 53/115 (46.09%), Query Frame = -1 Query: 7 YAKLGRFEEALDICREMEDSGMRRDVVTYNALLGGYGKQGKYDEVRALFDEMKAQKVSPNLLTYSTMIDVYSKGGLYDEAMDVFREFKWAGLKADVVLYSALIDALCKNGLVESA 351 +AK G +AL + + +G+ T +++ G+ E ALF+E++ + P Y+ ++ Y K G +A + E + G+ D YS LIDA G ESA Sbjct: 279 FAKSGDPSKALQLLGMAQATGLSAKTATLVSIISALADSGRTLEAEALFEELRQSGIKPRTRAYNALLKGYVKTGPLKDAESMVSEMEKRGVSPDEHTYSLLIDAYVNAGRWESA 393
BLAST of g.arboreum_cottongen_reftransV1_0010846 vs. ExPASy Swiss-Prot
Match: PPR39_ARATH (Pentatricopeptide repeat-containing protein At1g12775, mitochondrial OS=Arabidopsis thaliana GN=At1g12775 PE=2 SV=1) HSP 1 Score: 89.7373 bits (221), Expect = 4.509e-20 Identity = 40/115 (34.78%), Postives = 68/115 (59.13%), Query Frame = -1 Query: 4 AKLGRFEEALDICREMEDSGMRRDVVTYNALLGGYGKQGKYDEVRALFDEMKAQKVSPNLLTYSTMIDVYSKGGLYDEAMDVFREFKWAGLKADVVLYSALIDALCKNGLVESAV 348 K G + A ++ EME G + D++TYN L+GG+ G++D+ L +M +K+SPN++T+S +ID + K G EA + +E G+ + + Y++LID CK +E A+ Sbjct: 274 CKDGSLDNAFNLFNEMEIKGFKADIITYNTLIGGFCNAGRWDDGAKLLRDMIKRKISPNVVTFSVLIDSFVKEGKLREADQLLKEMMQRGIAPNTITYNSLIDGFCKENRLEEAI 388 HSP 2 Score: 80.4925 bits (197), Expect = 6.700e-17 Identity = 35/119 (29.41%), Postives = 70/119 (58.82%), Query Frame = -1 Query: 7 LLSIYAKLGRFEEALDICREMEDSGMRRDVVTYNALLGGYGKQGKYDEVRALFDEMKAQKVSPNLLTYSTMIDVYSKGGLYDEAMDVFREFKWAGLKADVVLYSALIDALCKNGLVESA 363 L+ + K G+ EA + +EM G+ + +TYN+L+ G+ K+ + +E + D M ++ P+++T++ +I+ Y K D+ +++FRE G+ A+ V Y+ L+ C++G +E A Sbjct: 339 LIDSFVKEGKLREADQLLKEMMQRGIAPNTITYNSLIDGFCKENRLEEAIQMVDLMISKGCDPDIMTFNILINGYCKANRIDDGLELFREMSLRGVIANTVTYNTLVQGFCQSGKLEVA 457 HSP 3 Score: 76.2554 bits (186), Expect = 2.119e-15 Identity = 39/116 (33.62%), Postives = 64/116 (55.17%), Query Frame = -1 Query: 4 YAKLGRFEEALDICREMEDSGMRRDVVTYNALLGGYGKQGKYDEVRALFDEMKAQKVSPNLLTYSTMIDVYSKGGLYDEAMDVFREFKWAGLKADVVLYSALIDALCKNGLVESAV 351 + K R EEA+ + M G D++T+N L+ GY K + D+ LF EM + V N +TY+T++ + + G + A +F+E ++ D+V Y L+D LC NG +E A+ Sbjct: 378 FCKENRLEEAIQMVDLMISKGCDPDIMTFNILINGYCKANRIDDGLELFREMSLRGVIANTVTYNTLVQGFCQSGKLEVAKKLFQEMVSRRVRPDIVSYKILLDGLCDNGELEKAL 493 HSP 4 Score: 74.3294 bits (181), Expect = 7.847e-15 Identity = 34/119 (28.57%), Postives = 71/119 (59.66%), Query Frame = -1 Query: 7 LLSIYAKLGRFEEALDICREMEDSGMRRDVVTYNALLGGYGKQGKYDEVRALFDEMKAQKVSPNLLTYSTMIDVYSKGGLYDEAMDVFREFKWAGLKADVVLYSALIDALCKNGLVESA 363 L++ Y K R ++ L++ REM G+ + VTYN L+ G+ + GK + + LF EM +++V P++++Y ++D G ++A+++F + + + ++ D+ +Y +I +C V+ A Sbjct: 409 LINGYCKANRIDDGLELFREMSLRGVIANTVTYNTLVQGFCQSGKLEVAKKLFQEMVSRRVRPDIVSYKILLDGLCDNGELEKALEIFGKIEKSKMELDIGIYMIIIHGMCNASKVDDA 527 HSP 5 Score: 70.8626 bits (172), Expect = 1.473e-13 Identity = 37/110 (33.64%), Postives = 59/110 (53.64%), Query Frame = -1 Query: 7 RFEEALDICREMEDSGMRRDVVTYNALLGGYGKQGKYDEVRALFDEMKAQKVSPNLLTYSTMIDVYSKGGLYDEAMDVFREFKWAGLKADVVLYSALIDALCKNGLVESA 336 R EAL++ M + G + ++T N L+ G GK + L D M PN +TY +++V K G AM++ R+ + +K D V YS +ID LCK+G +++A Sbjct: 173 RVSEALELVDRMVEMGHKPTLITLNTLVNGLCLNGKVSDAVVLIDRMVETGFQPNEVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKDGSLDNA 282 HSP 6 Score: 68.5514 bits (166), Expect = 7.809e-13 Identity = 34/119 (28.57%), Postives = 66/119 (55.46%), Query Frame = -1 Query: 7 LLSIYAKLGRFEEALDICREMEDSGMRRDVVTYNALLGGYGKQGKYDEVRALFDEMKAQKVSPNLLTYSTMIDVYSKGGLYDEAMDVFREFKWAGLKADVVLYSALIDALCKNGLVESA 363 +L++ K G+ A+++ R+ME+ ++ D V Y+ ++ G K G D LF+EM+ + +++TY+T+I + G +D+ + R+ + +VV +S LID+ K G + A Sbjct: 234 VLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIITYNTLIGGFCNAGRWDDGAKLLRDMIKRKISPNVVTFSVLIDSFVKEGKLREA 352 HSP 7 Score: 63.5438 bits (153), Expect = 3.809e-11 Identity = 30/108 (27.78%), Postives = 59/108 (54.63%), Query Frame = -1 Query: 28 YAKLGRFEEALDICREMEDSGMRRDVVTYNALLGGYGKQGKYDEVRALFDEMKAQKVSPNLLTYSTMIDVYSKGGLYDEAMDVFREFKWAGLKADVVLYSALIDALCK 351 + GR+++ + R+M + +VVT++ L+ + K+GK E L EM + ++PN +TY+++ID + K +EA+ + G D++ ++ LI+ CK Sbjct: 308 FCNAGRWDDGAKLLRDMIKRKISPNVVTFSVLIDSFVKEGKLREADQLLKEMMQRGIAPNTITYNSLIDGFCKENRLEEAIQMVDLMISKGCDPDIMTFNILINGYCK 415 HSP 8 Score: 50.447 bits (119), Expect = 9.059e-7 Identity = 28/108 (25.93%), Postives = 53/108 (49.07%), Query Frame = -1 Query: 28 YAKLGRFEEALDICREMEDSGMRRDVVTYNALLGGYGKQGKYDEVRALFDEMKAQKVSPNLLTYSTMIDVYSKGGLYDEAMDVFREFKWAGLKADVVLYSALIDALCK 351 + + G+ E A + +EM +R D+V+Y LL G G+ ++ +F +++ K+ ++ Y +I D+A D+F G+K D Y+ +I LC+ Sbjct: 448 FCQSGKLEVAKKLFQEMVSRRVRPDIVSYKILLDGLCDNGELEKALEIFGKIEKSKMELDIGIYMIIIHGMCNASKVDDAWDLFCSLPLKGVKLDARAYNIMISELCR 555
BLAST of g.arboreum_cottongen_reftransV1_0010846 vs. ExPASy Swiss-Prot
Match: PP318_ARATH (Putative pentatricopeptide repeat-containing protein At4g17915 OS=Arabidopsis thaliana GN=At4g17915 PE=3 SV=1) HSP 1 Score: 87.8113 bits (216), Expect = 1.026e-19 Identity = 47/121 (38.84%), Postives = 74/121 (61.16%), Query Frame = -1 Query: 4 LLSIYAKLGRFEEALDICREMEDSGMRRDVVTYNALLGGYGKQGKYDEVRALFDEMKAQKVSPNLLTYSTMIDVYSKGGLYDEAMDV-FREFKWAGLKADVVLYSALIDALCKNGLVESAV 363 L+S Y + EEA + R M D+G+R DV TYN+L+ G ++ D V LFDEM + P+L +Y+T++ Y K G ++EA V +++ + AGL Y+ L+DALCK G +++A+ Sbjct: 54 LISGYCRFVGIEEAYAVTRRMRDAGIRPDVATYNSLIAGAARRLMLDHVLYLFDEMLEWGIYPDLWSYNTLMCCYFKLGKHEEAFRVLYKDLQLAGLNPGPDTYNVLLDALCKCGYIDNAL 174 HSP 2 Score: 60.4622 bits (145), Expect = 3.168e-10 Identity = 36/119 (30.25%), Postives = 61/119 (51.26%), Query Frame = -1 Query: 7 LLSIYAKLGRFEEALDICREMEDSGMRRDVVTYNALLGGYGKQGKYDEVRALFDEMKAQKVSPNLLTYSTMIDVYSKGGLYDEAMDVFREFKWAGLKADVVLYSALIDALCKNGLVESA 363 LL K G + AL++ +EM+ S + +++TYN L+ G K + + + E+K +PN +TY+T++ +Y K + +F E K G D Y A++ AL K G + A Sbjct: 160 LLDALCKCGYIDNALELFKEMQ-SRFKPELMTYNILINGLCKSRRVGTAKWMLTELKKSGYTPNAVTYTTILKLYFKTRRIRRGLQLFLEMKREGYTYDGYAYFAVVSALIKTGRTKEA 277 HSP 3 Score: 59.3066 bits (142), Expect = 7.598e-10 Identity = 36/120 (30.00%), Postives = 63/120 (52.50%), Query Frame = -1 Query: 4 LLSIYAKLGRFEEALDICREMEDSGMRRDVVTYNALLGGYGKQGKYDEVRALFDEMKAQKVSPNLLTYSTMIDVYSKGGLYDEAMDVFREFKWAGLKADVVLYSALIDALCKNGLVESAV 363 ++S K GR +EA + +E+ G R D+V+YN LL Y K G D V L E++ + + + T++ +++ + G A + F G+ ++V + L+D LCK G V+ A+ Sbjct: 264 VVSALIKTGRTKEAYEYMQELVRKGRRHDIVSYNTLLNLYFKDGNLDAVDDLLGEIERRGMKADEYTHTIIVNGLLRTGQTRRAEEHFVSMGEMGIGLNLVTCNCLVDGLCKAGHVDRAM 383
BLAST of g.arboreum_cottongen_reftransV1_0010846 vs. ExPASy Swiss-Prot
Match: PP247_ARATH (Pentatricopeptide repeat-containing protein At3g22470, mitochondrial OS=Arabidopsis thaliana GN=At3g22470 PE=2 SV=1) HSP 1 Score: 87.8113 bits (216), Expect = 1.529e-19 Identity = 42/114 (36.84%), Postives = 69/114 (60.53%), Query Frame = -1 Query: 7 AKLGRFEEALDICREMEDSGMRRDVVTYNALLGGYGKQGKYDEVRALFDEMKAQKVSPNLLTYSTMIDVYSKGGLYDEAMDVFREFKWAGLKADVVLYSALIDALCKNGLVESA 348 K G F++AL + EME G++ DVVTY++L+GG GK+D+ + EM + + P+++T+S +IDV+ K G EA +++ E G+ D + Y++LID CK + A Sbjct: 256 CKDGSFDDALSLFNEMEMKGIKADVVTYSSLIGGLCNDGKWDDGAKMLREMIGRNIIPDVVTFSALIDVFVKEGKLLEAKELYNEMITRGIAPDTITYNSLIDGFCKENCLHEA 369 HSP 2 Score: 82.4185 bits (202), Expect = 1.170e-17 Identity = 38/119 (31.93%), Postives = 68/119 (57.14%), Query Frame = -1 Query: 7 LLSIYAKLGRFEEALDICREMEDSGMRRDVVTYNALLGGYGKQGKYDEVRALFDEMKAQKVSPNLLTYSTMIDVYSKGGLYDEAMDVFREFKWAGLKADVVLYSALIDALCKNGLVESA 363 L+ ++ K G+ EA ++ EM G+ D +TYN+L+ G+ K+ E +FD M ++ P+++TYS +I+ Y K D+ M +FRE GL + + Y+ L+ C++G + +A Sbjct: 321 LIDVFVKEGKLLEAKELYNEMITRGIAPDTITYNSLIDGFCKENCLHEANQMFDLMVSKGCEPDIVTYSILINSYCKAKRVDDGMRLFREISSKGLIPNTITYNTLVLGFCQSGKLNAA 439 HSP 3 Score: 74.7146 bits (182), Expect = 7.121e-15 Identity = 40/106 (37.74%), Postives = 60/106 (56.60%), Query Frame = -1 Query: 22 GRFEEALDICREMEDSGMRRDVVTYNALLGGYGKQGKYDEVRALFDEMKAQKVSPNLLTYSTMIDVYSKGGLYDEAMDVFREFKWAGLKADVVLYSALIDALCKNG 339 GR EAL + M + G + D VTY +L K G LF +M+ + + +++ YS +ID K G +D+A+ +F E + G+KADVV YS+LI LC +G Sbjct: 189 GRVSEALVLIDRMVEYGFQPDEVTYGPVLNRLCKSGNSALALDLFRKMEERNIKASVVQYSIVIDSLCKDGSFDDALSLFNEMEMKGIKADVVTYSSLIGGLCNDG 294 HSP 4 Score: 71.2478 bits (173), Expect = 1.100e-13 Identity = 35/104 (33.65%), Postives = 63/104 (60.58%), Query Frame = -1 Query: 28 GRFEEALDICREMEDSGMRRDVVTYNALLGGYGKQGKYDEVRALFDEMKAQKVSPNLLTYSTMIDVYSKGGLYDEAMDVFREFKWAGLKADVVLYSALIDALCK 339 G++++ + REM + DVVT++AL+ + K+GK E + L++EM + ++P+ +TY+++ID + K EA +F G + D+V YS LI++ CK Sbjct: 294 GKWDDGAKMLREMIGRNIIPDVVTFSALIDVFVKEGKLLEAKELYNEMITRGIAPDTITYNSLIDGFCKENCLHEANQMFDLMVSKGCEPDIVTYSILINSYCK 397 HSP 5 Score: 70.8626 bits (172), Expect = 1.245e-13 Identity = 32/121 (26.45%), Postives = 69/121 (57.02%), Query Frame = -1 Query: 1 LLSIYAKLGRFEEALDICREMEDSGMRRDVVTYNALLGGYGKQGKYDEVRALFDEMKAQKVSPNLLTYSTMIDVYSKGGLYDEAMDVFREFKWAGLKADVVLYSALIDALCKNGLVESAVS 363 L++ Y K R ++ + + RE+ G+ + +TYN L+ G+ + GK + + LF EM ++ V P+++TY ++D G ++A+++F + + + + + +Y+ +I +C V+ A S Sbjct: 391 LINSYCKAKRVDDGMRLFREISSKGLIPNTITYNTLVLGFCQSGKLNAAKELFQEMVSRGVPPSVVTYGILLDGLCDNGELNKALEIFEKMQKSRMTLGIGIYNIIIHGMCNASKVDDAWS 511 HSP 6 Score: 70.4774 bits (171), Expect = 2.021e-13 Identity = 39/113 (34.51%), Postives = 62/113 (54.87%), Query Frame = -1 Query: 1 GRFEEALDICREMEDSGMRRDVVTYNALLGGYGKQGKYDEVRALFDEMKAQKVSPNLLTYSTMIDVYSKGGLYDEAMDVFREFKWAGLKADVVLYSALIDALCKNGLVESAVS 339 GR EA+ + M + R D+VT + L+ G +G+ E L D M P+ +TY +++ K G A+D+FR+ + +KA VV YS +ID+LCK+G + A+S Sbjct: 154 GRVSEAVALVDRMVEMKQRPDLVTVSTLINGLCLKGRVSEALVLIDRMVEYGFQPDEVTYGPVLNRLCKSGNSALALDLFRKMEERNIKASVVQYSIVIDSLCKDGSFDDALS 266 HSP 7 Score: 69.707 bits (169), Expect = 3.573e-13 Identity = 37/114 (32.46%), Postives = 64/114 (56.14%), Query Frame = -1 Query: 22 LLSIYAKLGRFEEALDICREMEDSGMRRDVVTYNALLGGYGKQGKYDEVRALFDEMKAQKVSPNLLTYSTMIDVYSKGGLYDEAMDVFREFKWAGLKADVVLYSALIDALCKNG 363 +L+ K G ALD+ R+ME+ ++ VV Y+ ++ K G +D+ +LF+EM+ + + +++TYS++I G +D+ + RE + DVV +SALID K G Sbjct: 216 VLNRLCKSGNSALALDLFRKMEERNIKASVVQYSIVIDSLCKDGSFDDALSLFNEMEMKGIKADVVTYSSLIGGLCNDGKWDDGAKMLREMIGRNIIPDVVTFSALIDVFVKEG 329 HSP 8 Score: 59.3066 bits (142), Expect = 1.004e-9 Identity = 31/101 (30.69%), Postives = 52/101 (51.49%), Query Frame = -1 Query: 34 RFEEALDICREMEDSGMRRDVVTYNALLGGYGKQGKYDEVRALFDEMKAQKVSPNLLTYSTMIDVYSKGGLYDEAMDVFREFKWAGLKADVVLYSALIDAL 336 + ++A + + D G++ DVVTYN ++GG K+G E LF +MK +P+ TY+ +I + G ++++ E K G AD +ID L Sbjct: 505 KVDDAWSLFCSLSDKGVKPDVVTYNVMIGGLCKKGSLSEADMLFRKMKEDGCTPDDFTYNILIRAHLGGSGLISSVELIEEMKVCGFSADSSTIKMVIDML 605 HSP 9 Score: 59.3066 bits (142), Expect = 1.082e-9 Identity = 32/115 (27.83%), Postives = 58/115 (50.43%), Query Frame = -1 Query: 7 YAKLGRFEEALDICREMEDSGMRRDVVTYNALLGGYGKQGKYDEVRALFDEMKAQKVSPNLLTYSTMIDVYSKGGLYDEAMDVFREFKWAGLKADVVLYSALIDALCKNGLVESA 351 + + G+ A ++ +EM G+ VVTY LL G G+ ++ +F++M+ +++ + Y+ +I D+A +F G+K DVV Y+ +I LCK G + A Sbjct: 430 FCQSGKLNAAKELFQEMVSRGVPPSVVTYGILLDGLCDNGELNKALEIFEKMQKSRMTLGIGIYNIIIHGMCNASKVDDAWSLFCSLSDKGVKPDVVTYNVMIGGLCKKGSLSEA 544 HSP 10 Score: 56.6102 bits (135), Expect = 8.787e-9 Identity = 37/112 (33.04%), Postives = 57/112 (50.89%), Query Frame = -1 Query: 7 GRFEEALDICREMEDSGMRRDVVTYNALLGGYGKQGKYDEVRALFDEMKAQKVSPNLLTYSTMIDVYSKGGLYDEAMDVFREFKWAGLKADVVLYSALIDA-LCKNGLVESA 339 G +AL+I +M+ S M + YN ++ G K D+ +LF + + V P+++TY+ MI K G EA +FR+ K G D Y+ LI A L +GL+ S Sbjct: 469 GELNKALEIFEKMQKSRMTLGIGIYNIIIHGMCNASKVDDAWSLFCSLSDKGVKPDVVTYNVMIGGLCKKGSLSEADMLFRKMKEDGCTPDDFTYNILIRAHLGGSGLISSV 580
BLAST of g.arboreum_cottongen_reftransV1_0010846 vs. ExPASy Swiss-Prot
Match: PP124_ARATH (Pentatricopeptide repeat-containing protein At1g74850, chloroplastic OS=Arabidopsis thaliana GN=PTAC2 PE=2 SV=1) HSP 1 Score: 88.5817 bits (218), Expect = 1.558e-19 Identity = 41/120 (34.17%), Postives = 75/120 (62.50%), Query Frame = -1 Query: 7 LLSIYAKLGRFEEALDICREMEDSGMRRDVVTYNALLGGYGKQGKYDEVRALFDEMKAQKVSPNLLTYSTMIDVYSKGGL-YDEAMDVFREFKWAGLKADVVLYSALIDALCKNGLVESA 363 ++S+ + G ++ L++ EM G+ R V +Y AL+ YG+ G+Y+ L D MK +K+SP++LTY+T+I+ ++GGL ++ + +F E + G++ D+V Y+ L+ A GL + A Sbjct: 147 MISLLGREGLLDKCLEVFDEMPSQGVSRSVFSYTALINAYGRNGRYETSLELLDRMKNEKISPSILTYNTVINACARGGLDWEGLLGLFAEMRHEGIQPDIVTYNTLLSACAIRGLGDEA 266 HSP 2 Score: 86.6557 bits (213), Expect = 5.739e-19 Identity = 43/119 (36.13%), Postives = 70/119 (58.82%), Query Frame = -1 Query: 7 LLSIYAKLGRFEEALDICREMEDSGMRRDVVTYNALLGGYGKQGKYDEVRALFDEMKAQKVSPNLLTYSTMIDVYSKGGLYDEAMDVFREFKWAGLKADVVLYSALIDALCKNGLVESA 363 LL YAK G +EA+ + +M+ +G + TY+ LL +G+ G+YD+VR LF EMK+ P+ TY+ +I+V+ +GG + E + +F + ++ D+ Y +I A K GL E A Sbjct: 323 LLEAYAKSGSIKEAMGVFHQMQAAGCTPNANTYSVLLNLFGQSGRYDDVRQLFLEMKSSNTDPDAATYNILIEVFGEGGYFKEVVTLFHDMVEENIEPDMETYEGIIFACGKGGLHEDA 441 HSP 3 Score: 78.5666 bits (192), Expect = 4.215e-16 Identity = 38/121 (31.40%), Postives = 62/121 (51.24%), Query Frame = -1 Query: 1 LLSIYAKLGRFEEALDICREMEDSGMRRDVVTYNALLGGYGKQGKYDEVRALFDEMKAQKVSPNLLTYSTMIDVYSKGGLYDEAMDVFREFKWAGLKADVVLYSALIDALCKNGLVESAVS 363 L+ + KL R E+ D+ EM G D+ +YN LL Y K G E +F +M+A +PN TYS +++++ + G YD+ +F E K + D Y+ LI+ + G + V+ Sbjct: 288 LVETFGKLRRLEKVCDLLGEMASGGSLPDITSYNVLLEAYAKSGSIKEAMGVFHQMQAAGCTPNANTYSVLLNLFGQSGRYDDVRQLFLEMKSSNTDPDAATYNILIEVFGEGGYFKEVVT 408 HSP 4 Score: 65.0846 bits (157), Expect = 1.710e-11 Identity = 37/114 (32.46%), Postives = 63/114 (55.26%), Query Frame = -1 Query: 22 LLSIYAKLGRFEEALDICREMEDSGMRRDVVTYNALLGGYGKQGKYDEVRALFDEMKAQKVSPNLLTYSTMIDVYSKGGLYDEAMDVFREFKWAGLKADVVLYSALIDALCKNG 363 LLS A G +EA + R M D G+ D+ TY+ L+ +GK + ++V L EM + P++ +Y+ +++ Y+K G EAM VF + + AG + YS L++ ++G Sbjct: 253 LLSACAIRGLGDEAEMVFRTMNDGGIVPDLTTYSHLVETFGKLRRLEKVCDLLGEMASGGSLPDITSYNVLLEAYAKSGSIKEAMGVFHQMQAAGCTPNANTYSVLLNLFGQSG 366 HSP 5 Score: 60.8474 bits (146), Expect = 4.524e-10 Identity = 33/110 (30.00%), Postives = 57/110 (51.82%), Query Frame = -1 Query: 4 FEEALDICREMEDSGMRRDVVTYNALLGGYGKQGKYDEVRALFDEMKAQKVSPNLLTYSTMIDVYSKGGLYDEAMDVFREFKWAGLKADVVLYSALIDALCKNGLVESAV 333 +E L + EM G++ D+VTYN LL +G DE +F M + P+L TYS +++ + K ++ D+ E G D+ Y+ L++A K+G ++ A+ Sbjct: 228 WEGLLGLFAEMRHEGIQPDIVTYNTLLSACAIRGLGDEAEMVFRTMNDGGIVPDLTTYSHLVETFGKLRRLEKVCDLLGEMASGGSLPDITSYNVLLEAYAKSGSIKEAM 337 HSP 6 Score: 58.9214 bits (141), Expect = 1.800e-9 Identity = 27/119 (22.69%), Postives = 61/119 (51.26%), Query Frame = -1 Query: 7 LLSIYAKLGRFEEALDICREMEDSGMRRDVVTYNALLGGYGKQGKYDEVRALFDEMKAQKVSPNLLTYSTMIDVYSKGGLYDEAMDVFREFKWAGLKADVVLYSALIDALCKNGLVESA 363 L+ ++ + G F+E + + +M + + D+ TY ++ GK G +++ R + M A + P+ Y+ +I+ + + LY+EA+ F G + + +L+ + + GLV+ + Sbjct: 393 LIEVFGEGGYFKEVVTLFHDMVEENIEPDMETYEGIIFACGKGGLHEDARKILQYMTANDIVPSSKAYTGVIEAFGQAALYEEALVAFNTMHEVGSNPSIETFHSLLYSFARGGLVKES 511 HSP 7 Score: 53.1434 bits (126), Expect = 1.382e-7 Identity = 30/107 (28.04%), Postives = 56/107 (52.34%), Query Frame = -1 Query: 43 LLSIYAKLGRFEEALDICREMEDSGMRRDVVTYNALLGGYGKQGKYDEVRALFDEMKAQKVSPNLLTYSTMIDVYSKGGLYDEAMDVFREFKWAGLKADVVLYSALI 363 LL +A+ G +E+ I + DSG+ R+ T+NA + Y + GK++E + +M+ + P+ T ++ VYS L DE + F E K + + ++ Y ++ Sbjct: 498 LLYSFARGGLVKESEAILSRLVDSGIPRNRDTFNAQIEAYKQGGKFEEAVKTYVDMEKSRCDPDERTLEAVLSVYSFARLVDECREQFEEMKASDILPSIMCYCMML 604 HSP 8 Score: 51.6026 bits (122), Expect = 3.714e-7 Identity = 30/86 (34.88%), Postives = 45/86 (52.33%), Query Frame = -1 Query: 94 YAKLGRFEEALDICREMEDSGMRRDVVTYNALLGGYGKQGKYDEVRALFDEMKAQKVSPNLLTYSTMIDVYSKGGLYDEAMDVFRE 351 Y + G+FEEA+ +ME S D T A+L Y DE R F+EMKA + P+++ Y M+ VY K +D+ ++ E Sbjct: 537 YKQGGKFEEAVKTYVDMEKSRCDPDERTLEAVLSVYSFARLVDECREQFEEMKASDILPSIMCYCMMLAVYGKTERWDDVNELLEE 622
BLAST of g.arboreum_cottongen_reftransV1_0010846 vs. ExPASy Swiss-Prot
Match: PP362_ARATH (Pentatricopeptide repeat-containing protein At5g02860 OS=Arabidopsis thaliana GN=At5g02860 PE=2 SV=1) HSP 1 Score: 87.0409 bits (214), Expect = 4.087e-19 Identity = 40/121 (33.06%), Postives = 74/121 (61.16%), Query Frame = -1 Query: 1 LLSIYAKLGRFEEALDICREMEDSGMRRDVVTYNALLGGYGKQGKYDEVRALFDEMKAQKVSPNLLTYSTMIDVYSKGGLYDEAMDVFREFKWAGLKADVVLYSALIDALCKNGLVESAVS 363 LLS + + G+ E A+ I EM ++G + ++ T+NA + YG +GK+ E+ +FDE+ +SP+++T++T++ V+ + G+ E VF+E K AG + ++ LI A + G E A++ Sbjct: 390 LLSGFERAGKVESAMSIFEEMRNAGCKPNICTFNAFIKMYGNRGKFTEMMKIFDEINVCGLSPDIVTWNTLLAVFGQNGMDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCGSFEQAMT 510 HSP 2 Score: 86.6557 bits (213), Expect = 6.355e-19 Identity = 41/121 (33.88%), Postives = 70/121 (57.85%), Query Frame = -1 Query: 1 LLSIYAKLGRFEEALDICREMEDSGMRRDVVTYNALLGGYGKQGKYDEVRALFDEMKAQKVSPNLLTYSTMIDVYSKGGLYDEAMDVFREFKWAGLKADVVLYSALIDALCKNGLVESAVS 363 L+S YA+ G +EA+++ +M + G + DV TY LL G+ + GK + ++F+EM+ PN+ T++ I +Y G + E M +F E GL D+V ++ L+ +NG+ +S VS Sbjct: 355 LISAYARDGMLDEAMELKNQMAEKGTKPDVFTYTTLLSGFERAGKVESAMSIFEEMRNAGCKPNICTFNAFIKMYGNRGKFTEMMKIFDEINVCGLSPDIVTWNTLLAVFGQNGM-DSEVS 474 HSP 3 Score: 82.4185 bits (202), Expect = 1.543e-17 Identity = 40/119 (33.61%), Postives = 67/119 (56.30%), Query Frame = -1 Query: 7 LLSIYAKLGRFEEALDICREMEDSGMRRDVVTYNALLGGYGKQGKYDEVRALFDEMKAQKVSPNLLTYSTMIDVYSKGGLYDEAMDVFREFKWAGLKADVVLYSALIDALCKNGLVESA 363 + +Y G+F E + I E+ G+ D+VT+N LL +G+ G EV +F EMK P T++T+I YS+ G +++AM V+R AG+ D+ Y+ ++ AL + G+ E + Sbjct: 425 FIKMYGNRGKFTEMMKIFDEINVCGLSPDIVTWNTLLAVFGQNGMDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCGSFEQAMTVYRRMLDAGVTPDLSTYNTVLAALARGGMWEQS 543 HSP 4 Score: 82.4185 bits (202), Expect = 1.886e-17 Identity = 42/110 (38.18%), Postives = 65/110 (59.09%), Query Frame = -1 Query: 1 EEALDICREMEDSGMRRDVVTYNALLGGYGKQGKYDEVRALFDEMKAQKVSPNLLTYSTMIDVYSKGGLYDEAMDVFREFKWAGLKADVVLYSALIDALCKNGLVESAVS 330 +EA + EM+ +G D VTYNALL YGK + E + +EM SP+++TY+++I Y++ G+ DEAM++ + G K DV Y+ L+ + G VESA+S Sbjct: 296 QEAAQVFEEMKAAGFSYDKVTYNALLDVYGKSHRPKEAMKVLNEMVLNGFSPSIVTYNSLISAYARDGMLDEAMELKNQMAEKGTKPDVFTYTTLLSGFERAGKVESAMS 405 HSP 5 Score: 78.5666 bits (192), Expect = 4.232e-16 Identity = 35/107 (32.71%), Postives = 61/107 (57.01%), Query Frame = -1 Query: 43 LLSIYAKLGRFEEALDICREMEDSGMRRDVVTYNALLGGYGKQGKYDEVRALFDEMKAQKVSPNLLTYSTMIDVYSKGGLYDEAMDVFREFKWAGLKADVVLYSALI 363 LL +Y K R +EA+ + EM +G +VTYN+L+ Y + G DE L ++M + P++ TY+T++ + + G + AM +F E + AG K ++ ++A I Sbjct: 320 LLDVYGKSHRPKEAMKVLNEMVLNGFSPSIVTYNSLISAYARDGMLDEAMELKNQMAEKGTKPDVFTYTTLLSGFERAGKVESAMSIFEEMRNAGCKPNICTFNAFI 426 HSP 6 Score: 75.0998 bits (183), Expect = 6.062e-15 Identity = 42/156 (26.92%), Postives = 78/156 (50.00%), Query Frame = -1 Query: 4 LLSIYAKLGRFEEALDICREMEDSGMRRDVVTYNALLGGYGKQG-KYDEVRALFDEMKAQKVSPNLLTYSTMI-----------------------------------DVYSKGGLYDEAMDVFREFKWAGLKADVVLYSALIDALCKNGLVESAV 363 L+S +A GR+ EA+++ ++ME+ G + ++TYN +L +GK G ++++ +L ++MK+ ++P+ TY+T+I DVY K EAM V E G +V Y++LI A ++G+++ A+ Sbjct: 214 LISAFANSGRYREAVNVFKKMEEDGCKPTLITYNVILNVFGKMGTPWNKITSLVEKMKSDGIAPDAYTYNTLITCCKRGSLHQEAAQVFEEMKAAGFSYDKVTYNALLDVYGKSHRPKEAMKVLNEMVLNGFSPSIVTYNSLISAYARDGMLDEAM 369 HSP 7 Score: 67.3958 bits (163), Expect = 2.090e-12 Identity = 28/112 (25.00%), Postives = 65/112 (58.04%), Query Frame = -1 Query: 28 LLSIYAKLGRFEEALDICREMEDSGMRRDVVTYNALLGGYGKQGKYDEVRALFDEMKAQKVSPNLLTYSTMIDVYSKGGLYDEAMDVFREFKWAGLKADVVLYSALIDALCK 363 L+ ++++ F ++ +I RE+ G++ D+++YN ++ Y + + + +F EM+ + P+++TY+T I Y+ +++EA+ V R G + + Y++++D CK Sbjct: 670 LMYMHSRSADFGKSEEILREILAKGIKPDIISYNTVIYAYCRNTRMRDASRIFSEMRNSGIVPDVITYNTFIGSYAADSMFEEAIGVVRYMIKHGCRPNQNTYNSIVDGYCK 781 HSP 8 Score: 62.003 bits (149), Expect = 1.473e-10 Identity = 39/156 (25.00%), Postives = 67/156 (42.95%), Query Frame = -1 Query: 4 LLSIYAKLGRFEEALDICREMEDSGMRRDVVTYNALLGGYGKQGKYDEVRALFDEMKAQKVSPNLLTYSTMIDVYSK------------------------------------GGLYDEAMDVFREFKWAGLKADVVLYSALIDALCKNGLVESAV 363 ++S+ K GR A ++ +++ G DV +Y +L+ + G+Y E +F +M+ P L+TY+ +++V+ K G L+ EA VF E K AG D V Y+AL+D K+ + A+ Sbjct: 179 IISMLGKEGRVSSAANMFNGLQEDGFSLDVYSYTSLISAFANSGRYREAVNVFKKMEEDGCKPTLITYNVILNVFGKMGTPWNKITSLVEKMKSDGIAPDAYTYNTLITCCKRGSLHQEAAQVFEEMKAAGFSYDKVTYNALLDVYGKSHRPKEAM 334 HSP 9 Score: 62.003 bits (149), Expect = 1.756e-10 Identity = 29/119 (24.37%), Postives = 66/119 (55.46%), Query Frame = -1 Query: 7 LLSIYAKLGRFEEALDICREMEDSGMRRDVVTYNALLGGYGKQGKYDEVRALFDEMKAQKVSPNLLTYSTMIDVYSKGGLYDEAMDVFREFKWAGLKADVVLYSALIDALCKNGLVESA 363 L+ + +K EA E+++ G D+ T N+++ YG++ + + D MK + +P++ TY++++ ++S+ + ++ ++ RE G+K D++ Y+ +I A C+N + A Sbjct: 600 LVLVCSKCDLLPEAERAFSELKERGFSPDITTLNSMVSIYGRRQMVAKANGVLDYMKERGFTPSMATYNSLMYMHSRSADFGKSEEILREILAKGIKPDIISYNTVIYAYCRNTRMRDA 718 HSP 10 Score: 61.2326 bits (147), Expect = 2.950e-10 Identity = 26/78 (33.33%), Postives = 47/78 (60.26%), Query Frame = -1 Query: 130 LLSIYAKLGRFEEALDICREMEDSGMRRDVVTYNALLGGYGKQGKYDEVRALFDEMKAQKVSPNLLTYSTMIDVYSKG 363 L+S Y++ G FE+A+ + R M D+G+ D+ TYN +L + G +++ + EM+ + PN LTY +++ Y+ G Sbjct: 495 LISAYSRCGSFEQAMTVYRRMLDAGVTPDLSTYNTVLAALARGGMWEQSEKVLAEMEDGRCKPNELTYCSLLHAYANG 572 HSP 11 Score: 57.3806 bits (137), Expect = 4.797e-9 Identity = 27/120 (22.50%), Postives = 63/120 (52.50%), Query Frame = -1 Query: 4 LLSIYAKLGRFEEALDICREMEDSGMRRDVVTYNALLGGYGKQGKYDEVRALFDEMKAQKVSPNLLTYSTMIDVYSKGGLYDEAMDVFREFKWAGLKADVVLYSALIDALCKNGLVESAV 363 ++SIY + +A + M++ G + TYN+L+ + + + + + E+ A+ + P++++Y+T+I Y + +A +F E + +G+ DV+ Y+ I + + + E A+ Sbjct: 635 MVSIYGRRQMVAKANGVLDYMKERGFTPSMATYNSLMYMHSRSADFGKSEEILREILAKGIKPDIISYNTVIYAYCRNTRMRDASRIFSEMRNSGIVPDVITYNTFIGSYAADSMFEEAI 754 HSP 12 Score: 56.9954 bits (136), Expect = 6.371e-9 Identity = 27/109 (24.77%), Postives = 61/109 (55.96%), Query Frame = -1 Query: 37 LLSIYAKLGRFEEALDICREMEDSGMRRDVVTYNALLGGYGKQGKYDEVRALFDEMKAQKVSPNLLTYSTMIDVYSKGGLYDEAMDVFREFKWAGLKADVVLYSALIDA 363 LL+++ + G E + +EM+ +G + T+N L+ Y + G +++ ++ M V+P+L TY+T++ ++GG+++++ V E + K + + Y +L+ A Sbjct: 460 LLAVFGQNGMDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCGSFEQAMTVYRRMLDAGVTPDLSTYNTVLAALARGGMWEQSEKVLAEMEDGRCKPNELTYCSLLHA 568 HSP 13 Score: 51.9878 bits (123), Expect = 3.113e-7 Identity = 27/80 (33.75%), Postives = 40/80 (50.00%), Query Frame = -1 Query: 112 YAKLGRFEEALDICREMEDSGMRRDVVTYNALLGGYGKQGKYDEVRALFDEMKAQKVSPNLLTYSTMIDVYSKGGLYDEA 351 Y + R +A I EM +SG+ DV+TYN +G Y ++E + M PN TY++++D Y K DEA Sbjct: 709 YCRNTRMRDASRIFSEMRNSGIVPDVITYNTFIGSYAADSMFEEAIGVVRYMIKHGCRPNQNTYNSIVDGYCKLNRKDEA 788
BLAST of g.arboreum_cottongen_reftransV1_0010846 vs. ExPASy Swiss-Prot
Match: PPR76_ARATH (Pentatricopeptide repeat-containing protein At1g51965, mitochondrial OS=Arabidopsis thaliana GN=At1g51965 PE=2 SV=1) HSP 1 Score: 86.2705 bits (212), Expect = 6.124e-19 Identity = 40/120 (33.33%), Postives = 73/120 (60.83%), Query Frame = -1 Query: 4 LLSIYAKLGRFEEALDICREMEDSGMRRDVVTYNALLGGYGKQGKYDEVRALFDEMKAQKVSPNLLTYSTMIDVYSKGGLYDEAMDVFREFKWAGLKADVVLYSALIDALCKNGLVESAV 363 L++ + ++G +EA++I E+E S + D+++YN+L+ GK G DE F EM+ + ++P+++TYST+++ + K + A +F E G + ++V Y+ L+D L KNG AV Sbjct: 483 LIASFGRVGEVDEAINIFEELERSDCKPDIISYNSLINCLGKNGDVDEAHVRFKEMQEKGLNPDVVTYSTLMECFGKTERVEMAYSLFEEMLVKGCQPNIVTYNILLDCLEKNGRTAEAV 602 HSP 2 Score: 78.5666 bits (192), Expect = 2.888e-16 Identity = 40/121 (33.06%), Postives = 66/121 (54.55%), Query Frame = -1 Query: 1 LLSIYAKLGRFEEALDICREMEDSGMRRDVVTYNALLGGYGKQGKYDEVRALFDEMKAQKVSPNLLTYSTMIDVYSKGGLYDEAMDVFREFKWAGLKADVVLYSALIDALCKNGLVESAVS 363 + S KL + D+ +M+ G D+ TYN L+ +G+ G+ DE +F+E++ P++++Y+++I+ K G DEA F+E + GL DVV YS L++ K VE A S Sbjct: 448 VFSALGKLKQISHIHDLFEKMKKDGPSPDIFTYNILIASFGRVGEVDEAINIFEELERSDCKPDIISYNSLINCLGKNGDVDEAHVRFKEMQEKGLNPDVVTYSTLMECFGKTERVEMAYS 568 HSP 3 Score: 76.2554 bits (186), Expect = 1.962e-15 Identity = 35/111 (31.53%), Postives = 66/111 (59.46%), Query Frame = -1 Query: 7 GRFEEALDICREMEDSGMRRDVVTYNALLGGYGKQGKYDEVRALFDEMKAQKVSPNLLTYSTMIDVYSKGGLYDEAMDVFREFKWAGLKADVVLYSALIDALCKNGLVESA 339 G+ EA+++ ++ + G+ D + YN + GK + + LF++MK SP++ TY+ +I + + G DEA+++F E + + K D++ Y++LI+ L KNG V+ A Sbjct: 421 GKTIEAIEMLSKIHEKGVVTDTMMYNTVFSALGKLKQISHIHDLFEKMKKDGPSPDIFTYNILIASFGRVGEVDEAINIFEELERSDCKPDIISYNSLINCLGKNGDVDEA 531 HSP 4 Score: 73.559 bits (179), Expect = 1.619e-14 Identity = 36/106 (33.96%), Postives = 62/106 (58.49%), Query Frame = -1 Query: 46 LLSIYAKLGRFEEALDICREMEDSGMRRDVVTYNALLGGYGKQGKYDEVRALFDEMKAQKVSPNLLTYSTMIDVYSKGGLYDEAMDVFREFKWAGLKADVVLYSAL 363 L++ K G +EA +EM++ G+ DVVTY+ L+ +GK + + +LF+EM + PN++TY+ ++D K G EA+D++ + K GL D + Y+ L Sbjct: 518 LINCLGKNGDVDEAHVRFKEMQEKGLNPDVVTYSTLMECFGKTERVEMAYSLFEEMLVKGCQPNIVTYNILLDCLEKNGRTAEAVDLYSKMKQQGLTPDSITYTVL 623 HSP 5 Score: 64.6994 bits (156), Expect = 1.778e-11 Identity = 34/107 (31.78%), Postives = 59/107 (55.14%), Query Frame = -1 Query: 22 LGRFEEALDICREMEDSGMRRDVVTYNALLGGYGKQGKYDEVRALFDEMKAQKVSPNLLTYSTMIDVYSKGGLYDEAMDVFREFKWAGLKADVVLYSALIDALCKNG 342 L + E+A + +M+ RRD TY ++ G+ GK DE LF+EM + ++ N++ Y+T++ V +KG + D+A+ VF G + + YS L++ L G Sbjct: 248 LAKDEKACQVFEDMKKRHCRRDEYTYTIMIRTMGRIGKCDEAVGLFNEMITEGLTLNVVGYNTLMQVLAKGKMVDKAIQVFSRMVETGCRPNEYTYSLLLNLLVAEG 354 HSP 6 Score: 58.5362 bits (140), Expect = 1.752e-9 Identity = 38/120 (31.67%), Postives = 60/120 (50.00%), Query Frame = -1 Query: 4 LLSIYAKLGRFEEALDICREMEDSGMRRDVVTYNALLGGYGKQGKYDEVRALFDEMKAQKVSPNLLTYSTMIDVYSKGGLYDEAMDVFREFKWAGLKADVVLYSALIDALCKNGLVESAV 363 LL Y + + +A D+ E+ G + D+ YN LL K K +V F++MK + + TY+ MI + G DEA+ +F E GL +VV Y+ L+ L K +V+ A+ Sbjct: 209 LLQAYLRSRDYSKAFDVYCEIRRGGHKLDIFAYNMLLDALAKDEKACQV---FEDMKKRHCRRDEYTYTIMIRTMGRIGKCDEAVGLFNEMITEGLTLNVVGYNTLMQVLAKGKMVDKAI 325 The following BLAST results are available for this feature:
BLAST of g.arboreum_cottongen_reftransV1_0010846 vs. ExPASy TrEMBL
Analysis Date: 2016-11-15 (Homology Analysis for Gossypium arboreum CottonGen RefTrans V1 vs TrEMBL) Total hits: 25
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BLAST of g.arboreum_cottongen_reftransV1_0010846 vs. ExPASy Swiss-Prot
Analysis Date: 2016-11-15 (Homology Analysis for Gossypium arboreum CottonGen RefTrans V1 vs SwissProt) Total hits: 25
Pagesback to topInterPro
Analysis Name: InterProScan analysis for Gossypium arboreum CottonGen RefTrans V1
Date Performed: 2016-11-14
Sequences
The
following sequences are available for this feature:
contig sequence >g.arboreum_cottongen_reftransV1_0010846 ID=g.arboreum_cottongen_reftransV1_0010846; Name=g.arboreum_cottongen_reftransV1_0010846; organism=Gossypium arboreum; type=contig; length=363bpback to top |