g.arboreum_cottongen_reftransV1_0000159, g.arboreum_cottongen_reftransV1_0000159 (contig) Gossypium arboreum
Overview
Alignments
The following features are aligned
Analyses
This contig is derived from or has results from the following analyses
Homology
BLAST of g.arboreum_cottongen_reftransV1_0000159 vs. ExPASy TrEMBL
Match: A0A0D2TSR2_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_013G003600 PE=4 SV=1) HSP 1 Score: 287.345 bits (734), Expect = 5.866e-92 Identity = 140/142 (98.59%), Postives = 142/142 (100.00%), Query Frame = 2 Query: 2 FEALRRKLSQMEDAKESHSEIFKRANLKAGNIMFTKGVRTNGKKRIGVVPGVEIGDIFFFRMELILIGLHSQSMAGIDFMPMKADIEGERVAISIVSSGGYEDDAEDPDVLVYTGQGGNASADKEASDQKLVRGNLALERSL 427 FEALRRKLSQMEDAKESHS+IFKRANLKAGNIMFTKGVRTNGKKRIGVVPGVEIGDIFFFRMELILIGLHSQSMAGIDFMPMKADIEGERVAISIVSSGGYED+AEDPDVLVYTGQGGNASADKEASDQKLVRGNLALERSL Sbjct: 3 FEALRRKLSQMEDAKESHSDIFKRANLKAGNIMFTKGVRTNGKKRIGVVPGVEIGDIFFFRMELILIGLHSQSMAGIDFMPMKADIEGERVAISIVSSGGYEDNAEDPDVLVYTGQGGNASADKEASDQKLVRGNLALERSL 144
BLAST of g.arboreum_cottongen_reftransV1_0000159 vs. ExPASy TrEMBL
Match: A0A0B0P9I5_GOSAR (Histone-lysine N-methyltransferase, H3 lysine-9 specific SUVH3-like protein OS=Gossypium arboreum GN=F383_01107 PE=4 SV=1) HSP 1 Score: 291.967 bits (746), Expect = 7.246e-92 Identity = 142/142 (100.00%), Postives = 142/142 (100.00%), Query Frame = 2 Query: 2 FEALRRKLSQMEDAKESHSEIFKRANLKAGNIMFTKGVRTNGKKRIGVVPGVEIGDIFFFRMELILIGLHSQSMAGIDFMPMKADIEGERVAISIVSSGGYEDDAEDPDVLVYTGQGGNASADKEASDQKLVRGNLALERSL 427 FEALRRKLSQMEDAKESHSEIFKRANLKAGNIMFTKGVRTNGKKRIGVVPGVEIGDIFFFRMELILIGLHSQSMAGIDFMPMKADIEGERVAISIVSSGGYEDDAEDPDVLVYTGQGGNASADKEASDQKLVRGNLALERSL Sbjct: 188 FEALRRKLSQMEDAKESHSEIFKRANLKAGNIMFTKGVRTNGKKRIGVVPGVEIGDIFFFRMELILIGLHSQSMAGIDFMPMKADIEGERVAISIVSSGGYEDDAEDPDVLVYTGQGGNASADKEASDQKLVRGNLALERSL 329
BLAST of g.arboreum_cottongen_reftransV1_0000159 vs. ExPASy TrEMBL
Match: A0A0D2S632_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_013G003600 PE=4 SV=1) HSP 1 Score: 287.345 bits (734), Expect = 2.456e-90 Identity = 140/142 (98.59%), Postives = 142/142 (100.00%), Query Frame = 2 Query: 2 FEALRRKLSQMEDAKESHSEIFKRANLKAGNIMFTKGVRTNGKKRIGVVPGVEIGDIFFFRMELILIGLHSQSMAGIDFMPMKADIEGERVAISIVSSGGYEDDAEDPDVLVYTGQGGNASADKEASDQKLVRGNLALERSL 427 FEALRRKLSQMEDAKESHS+IFKRANLKAGNIMFTKGVRTNGKKRIGVVPGVEIGDIFFFRMELILIGLHSQSMAGIDFMPMKADIEGERVAISIVSSGGYED+AEDPDVLVYTGQGGNASADKEASDQKLVRGNLALERSL Sbjct: 159 FEALRRKLSQMEDAKESHSDIFKRANLKAGNIMFTKGVRTNGKKRIGVVPGVEIGDIFFFRMELILIGLHSQSMAGIDFMPMKADIEGERVAISIVSSGGYEDNAEDPDVLVYTGQGGNASADKEASDQKLVRGNLALERSL 300
BLAST of g.arboreum_cottongen_reftransV1_0000159 vs. ExPASy TrEMBL
Match: A0A061FS25_THECC (SU(VAR)3-9, putative OS=Theobroma cacao GN=TCM_044594 PE=4 SV=1) HSP 1 Score: 244.973 bits (624), Expect = 3.688e-74 Identity = 119/142 (83.80%), Postives = 131/142 (92.25%), Query Frame = 2 Query: 2 FEALRRKLSQMEDAKESHSEIFKRANLKAGNIMFTKGVRTNGKKRIGVVPGVEIGDIFFFRMELILIGLHSQSMAGIDFMPMKADIEGERVAISIVSSGGYEDDAEDPDVLVYTGQGGNASADKEASDQKLVRGNLALERSL 427 F+ALRR+LSQMEDAKESHS I KRA+LKAGNIM +KGVRTN KKRIGVVPGVEIGDIFFFRMEL ++GLHSQSMAGID+M +K D EGE VA+SIVSSGGY+DDAEDPDVLVY+GQGGNA+ DKEASDQKL RGNLALERSL Sbjct: 163 FDALRRRLSQMEDAKESHSGIIKRADLKAGNIMMSKGVRTNMKKRIGVVPGVEIGDIFFFRMELCVVGLHSQSMAGIDYMVVKGDSEGEPVALSIVSSGGYDDDAEDPDVLVYSGQGGNANKDKEASDQKLERGNLALERSL 304
BLAST of g.arboreum_cottongen_reftransV1_0000159 vs. ExPASy TrEMBL
Match: A0A0D2TXJ0_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_009G301500 PE=4 SV=1) HSP 1 Score: 238.424 bits (607), Expect = 8.180e-72 Identity = 116/143 (81.12%), Postives = 130/143 (90.91%), Query Frame = 2 Query: 2 FEALRRKLSQMEDAKESHSEIFKRANLKAGNIMFTKGVRTNGKKRIGVVPGVEIGDIFFFRMELILIGLHSQSMAGIDFMPMKA-DIEGERVAISIVSSGGYEDDAEDPDVLVYTGQGGNASADKEASDQKLVRGNLALERSL 427 F+ALRRKLSQMEDAKE HS I KR++LKA N+M TKGVRTN KKRIGVVPGVEIGDIFFFRMEL L+GLH SMAGID+M +K+ D+EGERVA+SIVSSGGY+DDAEDPDVLVY+GQGG+AS DKEASDQ+LVRGNLALERS Sbjct: 155 FDALRRKLSQMEDAKELHSSIIKRSDLKAANMMLTKGVRTNMKKRIGVVPGVEIGDIFFFRMELSLVGLHFPSMAGIDYMAIKSGDLEGERVALSIVSSGGYDDDAEDPDVLVYSGQGGSASRDKEASDQQLVRGNLALERSF 297
BLAST of g.arboreum_cottongen_reftransV1_0000159 vs. ExPASy TrEMBL
Match: A0A0D2RWC8_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_012G020600 PE=4 SV=1) HSP 1 Score: 227.639 bits (579), Expect = 1.248e-67 Identity = 109/142 (76.76%), Postives = 127/142 (89.44%), Query Frame = 2 Query: 2 FEALRRKLSQMEDAKESHSEIFKRANLKAGNIMFTKGVRTNGKKRIGVVPGVEIGDIFFFRMELILIGLHSQSMAGIDFMPMKADIEGERVAISIVSSGGYEDDAEDPDVLVYTGQGGNASADKEASDQKLVRGNLALERSL 427 F+ALRRKLSQMEDA E HS I KR++LKAGN+M +KGVRTN KKRIG VPGVEIGDIFFFRMEL L+GLH+QSMAGID+ +K ++EGE VA+SIVSSGGY++DAEDPD+L+Y+GQGGNA DKEASDQKL RGNLALE+SL Sbjct: 157 FDALRRKLSQMEDAVELHSGIIKRSDLKAGNMMMSKGVRTNMKKRIGAVPGVEIGDIFFFRMELCLVGLHAQSMAGIDY--IKGELEGELVALSIVSSGGYDNDAEDPDILIYSGQGGNAGRDKEASDQKLERGNLALEKSL 296
BLAST of g.arboreum_cottongen_reftransV1_0000159 vs. ExPASy TrEMBL
Match: B9SHW2_RICCO (Histone-lysine N-methyltransferase OS=Ricinus communis GN=RCOM_0622490 PE=4 SV=1) HSP 1 Score: 211.846 bits (538), Expect = 9.737e-62 Identity = 99/143 (69.23%), Postives = 129/143 (90.21%), Query Frame = 2 Query: 2 FEALRRKLSQMEDAKESHSEIFKRANLKAGNIMFTKGVRTNGKKRIGVVPGVEIGDIFFFRMELILIGLHSQSMAGIDFMPMKADIEGERVAISIVSSGGYEDDAEDPDVLVYTGQGGNASAD-KEASDQKLVRGNLALERSL 427 F+ALRR+LSQ+ED+KE+ + + KRA+LKAGN++ +KGVR+N +KRIG VPGVEIGDIFFFRME+ +IGLHSQSMAGID+M ++ DI+ + +A+SIVSSGGY+D+AED DVL+Y+GQGGNA+++ KEA+DQKL RGNLALERSL Sbjct: 172 FDALRRRLSQLEDSKEAPTGLIKRADLKAGNVLMSKGVRSNMRKRIGAVPGVEIGDIFFFRMEMCVIGLHSQSMAGIDYMIVRGDIDEDPLAVSIVSSGGYDDEAEDRDVLIYSGQGGNANSNKKEAADQKLERGNLALERSL 314
BLAST of g.arboreum_cottongen_reftransV1_0000159 vs. ExPASy TrEMBL
Match: B9GLS5_POPTR (Histone-lysine N-methyltransferase family protein OS=Populus trichocarpa GN=POPTR_0001s07390g PE=4 SV=2) HSP 1 Score: 209.92 bits (533), Expect = 4.262e-61 Identity = 101/142 (71.13%), Postives = 123/142 (86.62%), Query Frame = 2 Query: 2 FEALRRKLSQMEDAKESHSEIFKRANLKAGNIMFTKGVRTNGKKRIGVVPGVEIGDIFFFRMELILIGLHSQSMAGIDFMPMKADIEGERVAISIVSSGGYEDDAEDPDVLVYTGQGGNASADKEASDQKLVRGNLALERSL 427 F+ALRR+LSQ+EDAKES + I +RA+LKAGNI+ TK VRTN +KRIG VPGVEIGDIFFFRME+ L+GLH+ SMAGID+M ++ D+E E +A+SIVSSG Y+DDAED DVL+Y+GQGG A+ DK A+DQKL RGNLALERSL Sbjct: 160 FDALRRRLSQLEDAKESPAGIIRRADLKAGNILMTKQVRTNTRKRIGTVPGVEIGDIFFFRMEMCLLGLHAPSMAGIDYMSVRNDLEEEPLAVSIVSSGYYDDDAEDKDVLIYSGQGGAANKDKGATDQKLERGNLALERSL 301
BLAST of g.arboreum_cottongen_reftransV1_0000159 vs. ExPASy TrEMBL
Match: A0A067EA43_CITSI (Histone-lysine N-methyltransferase OS=Citrus sinensis GN=CISIN_1g006089mg PE=4 SV=1) HSP 1 Score: 209.534 bits (532), Expect = 5.960e-61 Identity = 99/143 (69.23%), Postives = 126/143 (88.11%), Query Frame = 2 Query: 2 FEALRRKLSQMEDAKESHSEIFKRANLKAGNIMFTKGVRTNGKKRIGVVPGVEIGDIFFFRMELILIGLHSQSMAGIDFMPMKADIEGERVAISIVSSGGYEDDAEDPDVLVYTGQGGNASADKE-ASDQKLVRGNLALERSL 427 F+ALRR++SQ+EDAKE+ + + +RA+LKA NI+ +KGVRTN +KR+GVVPGVEIGDIFFFRME+ LIGLHSQSMAGID+M ++D++ E VA+SI+SSGGY+DDAED D+L+Y+GQGGNA+ E A+DQKL RGNLALERSL Sbjct: 154 FDALRRRISQIEDAKETSTGLIRRADLKASNILMSKGVRTNMRKRLGVVPGVEIGDIFFFRMEMCLIGLHSQSMAGIDYMITRSDLDEEPVAVSIISSGGYDDDAEDSDILIYSGQGGNANRKGEQAADQKLERGNLALERSL 296
BLAST of g.arboreum_cottongen_reftransV1_0000159 vs. ExPASy TrEMBL
Match: V4SXK1_9ROSI (Histone-lysine N-methyltransferase OS=Citrus clementina GN=CICLE_v10000524mg PE=4 SV=1) HSP 1 Score: 209.534 bits (532), Expect = 6.881e-61 Identity = 99/143 (69.23%), Postives = 126/143 (88.11%), Query Frame = 2 Query: 2 FEALRRKLSQMEDAKESHSEIFKRANLKAGNIMFTKGVRTNGKKRIGVVPGVEIGDIFFFRMELILIGLHSQSMAGIDFMPMKADIEGERVAISIVSSGGYEDDAEDPDVLVYTGQGGNASADKE-ASDQKLVRGNLALERSL 427 F+ALRR++SQ+EDAKE+ + + +RA+LKA NI+ +KGVRTN +KR+GVVPGVEIGDIFFFRME+ LIGLHSQSMAGID+M ++D++ E VA+SI+SSGGY+DDAED D+L+Y+GQGGNA+ E A+DQKL RGNLALERSL Sbjct: 154 FDALRRRISQIEDAKETSTGLIRRADLKASNILMSKGVRTNMRKRLGVVPGVEIGDIFFFRMEMCLIGLHSQSMAGIDYMITRSDLDEEPVAVSIISSGGYDDDAEDSDILIYSGQGGNANRKGEQAADQKLERGNLALERSL 296
BLAST of g.arboreum_cottongen_reftransV1_0000159 vs. ExPASy Swiss-Prot
Match: YDG2_ARATH (YDG domain-containing protein At5g47160 OS=Arabidopsis thaliana GN=At5g47160 PE=2 SV=1) HSP 1 Score: 85.8853 bits (211), Expect = 5.313e-19 Identity = 62/139 (44.60%), Postives = 84/139 (60.43%), Query Frame = 2 Query: 23 LSQMEDAKESHSEIFK-RANLKAGNIMFTKGVRTNGKKRIGVVPGVEIGDIFFFRMELILIGLHSQSMAGIDFMPMKADIEGERVAISIVSSGGYE-DDAEDPDVLVYTGQGGNA-SADKEA-SDQKLVRGNLALERSL 427 L + + A+ SE K R + + I+ G++ N +KRIG VPG+++GD F+ L +IGLH M+GID+M K + E VA SIVSS G + D DV++Y GQGGN S D +A DQKLV GNLAL S+ Sbjct: 222 LDRNKAARRGGSETAKSRIDYQTWTILREMGMQVNSQKRIGSVPGIKVGDKIQFKAALSVIGLHFGIMSGIDYM-YKGNKE---VATSIVSSEGNDYGDRFINDVMIYCGQGGNMRSKDHKAIKDQKLVGGNLALANSI 356
BLAST of g.arboreum_cottongen_reftransV1_0000159 vs. ExPASy Swiss-Prot
Match: SUVH4_ARATH (Histone-lysine N-methyltransferase, H3 lysine-9 specific SUVH4 OS=Arabidopsis thaliana GN=SUVH4 PE=1 SV=2) HSP 1 Score: 87.0409 bits (214), Expect = 5.825e-19 Identity = 50/124 (40.32%), Postives = 72/124 (58.06%), Query Frame = 2 Query: 65 FKRANLKAGNIMFTKGVRTNGKKRIGVVPGVEIGDIFFFRMELILIGLHSQSMAGIDFMPMKADIEGER----VAISIVSSGGYEDDAEDPDVLVYTGQGG-NASADK-EASDQKLVRGNLALE 418 R +LK M +K IG +PG+++G FF R E+ +G H+ + GID+M M+ + E +A+SIV SG YEDD ++ D + YTGQGG N + +K + DQ L RGNLAL+ Sbjct: 124 LSRPDLKGVTEMIKAKAILYPRKIIGDLPGIDVGHRFFSRAEMCAVGFHNHWLNGIDYMSMEYEKEYSNYKLPLAVSIVMSGQYEDDLDNADTVTYTGQGGHNLTGNKRQIKDQLLERGNLALK 247
BLAST of g.arboreum_cottongen_reftransV1_0000159 vs. ExPASy Swiss-Prot
Match: UHRF1_RAT (E3 ubiquitin-protein ligase UHRF1 OS=Rattus norvegicus GN=Uhrf1 PE=2 SV=2) HSP 1 Score: 59.6918 bits (143), Expect = 1.440e-9 Identity = 35/97 (36.08%), Postives = 51/97 (52.58%), Query Frame = 2 Query: 140 GVVPGVEIGDIFFFRMELILIGLHSQSMAGIDFMPMKADIEGERVAISIVSSGGYEDDAEDPDVLVYTGQG-----GNASADKEASDQKLVRGNLAL 415 G +PGV +G ++ FR+++ G+H +AGI A S+V +GGYEDD ++ + YTG G GN ++SDQKL N AL Sbjct: 416 GPIPGVPVGTMWRFRVQVSESGVHRPHVAGIHGRSNDG-------AYSLVLAGGYEDDVDNGNFFTYTGSGGRDLSGNKRTAGQSSDQKLTNNNRAL 505
BLAST of g.arboreum_cottongen_reftransV1_0000159 vs. ExPASy Swiss-Prot
Match: SUVHA_ARATH (Putative inactive histone-lysine N-methyltransferase family member SUVH10 OS=Arabidopsis thaliana GN=SUVH10 PE=3 SV=1) HSP 1 Score: 58.5362 bits (140), Expect = 1.478e-9 Identity = 31/76 (40.79%), Postives = 50/76 (65.79%), Query Frame = 2 Query: 197 LIGLHSQSMAGIDFMPMK--ADIEGERVAISIVSSGGYEDDAEDPDVLVYTGQGGNASADKEASDQKLVRGNLALE 418 L+GLHS ++ ++F+ ++ D EG+++A+S++SSG D EDPD L++TG GG + +QKL R N+ LE Sbjct: 3 LVGLHSGTID-MEFIGVEDHGDEEGKQIAVSVISSGKNADKTEDPDSLIFTGFGGTDMYHGQPCNQKLERLNIPLE 77
BLAST of g.arboreum_cottongen_reftransV1_0000159 vs. ExPASy Swiss-Prot
Match: UHRF1_MOUSE (E3 ubiquitin-protein ligase UHRF1 OS=Mus musculus GN=Uhrf1 PE=1 SV=2) HSP 1 Score: 59.3066 bits (142), Expect = 1.830e-9 Identity = 35/97 (36.08%), Postives = 51/97 (52.58%), Query Frame = 2 Query: 140 GVVPGVEIGDIFFFRMELILIGLHSQSMAGIDFMPMKADIEGERVAISIVSSGGYEDDAEDPDVLVYTGQG-----GNASADKEASDQKLVRGNLAL 415 G +PGV +G ++ FR+++ G+H +AGI A S+V +GGYEDD ++ + YTG G GN ++SDQKL N AL Sbjct: 424 GPIPGVPVGTMWRFRVQVSESGVHRPHVAGIHGRSNDG-------AYSLVLAGGYEDDVDNGNYFTYTGSGGRDLSGNKRTAGQSSDQKLTNNNRAL 513
BLAST of g.arboreum_cottongen_reftransV1_0000159 vs. ExPASy Swiss-Prot
Match: UHRF1_DANRE (E3 ubiquitin-protein ligase UHRF1 OS=Danio rerio GN=uhrf1 PE=1 SV=1) HSP 1 Score: 58.151 bits (139), Expect = 4.038e-9 Identity = 36/97 (37.11%), Postives = 51/97 (52.58%), Query Frame = 2 Query: 140 GVVPGVEIGDIFFFRMELILIGLHSQSMAGIDFMPMKADIEGERVAISIVSSGGYEDDAEDPDVLVYTGQG-----GNASADKEASDQKLVRGNLAL 415 G VPGV +G ++ FR+++ G+H +AGI A S+V +GGYEDD +D + YTG G GN +++ DQKL N AL Sbjct: 417 GPVPGVPVGTLWKFRVQVSESGVHRPHVAGIHGRSNDG-------AYSLVLAGGYEDDVDDGNEFTYTGSGGRDLSGNKRTAEQSCDQKLTNMNRAL 506
BLAST of g.arboreum_cottongen_reftransV1_0000159 vs. ExPASy Swiss-Prot
Match: UHRF1_XENLA (E3 ubiquitin-protein ligase UHRF1 OS=Xenopus laevis GN=uhrf1 PE=2 SV=1) HSP 1 Score: 56.9954 bits (136), Expect = 1.144e-8 Identity = 45/152 (29.61%), Postives = 71/152 (46.71%), Query Frame = 2 Query: 14 RRKLSQMEDAKESHSEIFKRANLKAGNIM----FTKGVRTNGKKR---------IGVVPGVEIGDIFFFRMELILIGLHSQSMAGIDFMPMKADIEGERVAISIVSSGGYEDDAEDPDVLVYTGQG-----GNASADKEASDQKLVRGNLAL 415 R S++ A E E K+A + + N + KG+ G+ R G +PGV +G ++ FR+++ G+H +AGI + S+V +GGYEDD ++ + YTG G GN +++ DQKL N AL Sbjct: 362 RNDASEVVLAGEKLKESKKKARMASANSSSQRDWGKGMACVGRSRECTIVPSNHYGPIPGVPVGTLWKFRVQVSESGVHRPHVAGIHGRSNDG-------SYSLVLAGGYEDDVDNGNEFTYTGSGGRDLSGNKRTAEQSCDQKLSNMNRAL 506
BLAST of g.arboreum_cottongen_reftransV1_0000159 vs. ExPASy Swiss-Prot
Match: UHRF1_HUMAN (E3 ubiquitin-protein ligase UHRF1 OS=Homo sapiens GN=UHRF1 PE=1 SV=1) HSP 1 Score: 55.8398 bits (133), Expect = 2.452e-8 Identity = 33/97 (34.02%), Postives = 50/97 (51.55%), Query Frame = 2 Query: 140 GVVPGVEIGDIFFFRMELILIGLHSQSMAGIDFMPMKADIEGERVAISIVSSGGYEDDAEDPDVLVYTGQG-----GNASADKEASDQKLVRGNLAL 415 G +PG+ +G ++ FR+++ G+H +AGI A S+V +GGYEDD + + YTG G GN +++ DQKL N AL Sbjct: 419 GPIPGIPVGTMWRFRVQVSESGVHRPHVAGIHGRSNDG-------AYSLVLAGGYEDDVDHGNFFTYTGSGGRDLSGNKRTAEQSCDQKLTNTNRAL 508
BLAST of g.arboreum_cottongen_reftransV1_0000159 vs. ExPASy Swiss-Prot
Match: UHRF1_BOVIN (E3 ubiquitin-protein ligase UHRF1 OS=Bos taurus GN=UHRF1 PE=2 SV=1) HSP 1 Score: 55.4546 bits (132), Expect = 2.845e-8 Identity = 33/97 (34.02%), Postives = 50/97 (51.55%), Query Frame = 2 Query: 140 GVVPGVEIGDIFFFRMELILIGLHSQSMAGIDFMPMKADIEGERVAISIVSSGGYEDDAEDPDVLVYTGQG-----GNASADKEASDQKLVRGNLAL 415 G +PG+ +G ++ FR+++ G+H +AGI A S+V +GGYEDD + + YTG G GN +++ DQKL N AL Sbjct: 423 GPIPGIPVGTMWRFRVQVSESGVHRPHVAGIHG-------RSNHGAYSLVLAGGYEDDVDHGNSFTYTGSGGRDLSGNKRTAEQSCDQKLTNTNRAL 512
BLAST of g.arboreum_cottongen_reftransV1_0000159 vs. ExPASy Swiss-Prot
Match: UHRF1_XENTR (E3 ubiquitin-protein ligase UHRF1 OS=Xenopus tropicalis GN=uhrf1 PE=3 SV=2) HSP 1 Score: 54.299 bits (129), Expect = 8.337e-8 Identity = 33/97 (34.02%), Postives = 50/97 (51.55%), Query Frame = 2 Query: 140 GVVPGVEIGDIFFFRMELILIGLHSQSMAGIDFMPMKADIEGERVAISIVSSGGYEDDAEDPDVLVYTGQG-----GNASADKEASDQKLVRGNLAL 415 G +PGV +G ++ FR+++ G+H +AGI + S+V +GGYEDD ++ YTG G GN +++ DQKL N AL Sbjct: 419 GPIPGVPVGTLWKFRVQVSESGVHRPHVAGIHGRSNDG-------SYSLVLAGGYEDDVDNGSEFTYTGSGGRDLSGNKRTAEQSCDQKLTNMNRAL 508 The following BLAST results are available for this feature:
BLAST of g.arboreum_cottongen_reftransV1_0000159 vs. ExPASy TrEMBL
Analysis Date: 2016-11-15 (Homology Analysis for Gossypium arboreum CottonGen RefTrans V1 vs TrEMBL) Total hits: 25
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BLAST of g.arboreum_cottongen_reftransV1_0000159 vs. ExPASy Swiss-Prot
Analysis Date: 2016-11-15 (Homology Analysis for Gossypium arboreum CottonGen RefTrans V1 vs SwissProt) Total hits: 20
Pagesback to topInterPro
Analysis Name: InterProScan analysis for Gossypium arboreum CottonGen RefTrans V1
Date Performed: 2016-11-14
Sequences
The
following sequences are available for this feature:
contig sequence >g.arboreum_cottongen_reftransV1_0000159 ID=g.arboreum_cottongen_reftransV1_0000159; Name=g.arboreum_cottongen_reftransV1_0000159; organism=Gossypium arboreum; type=contig; length=427bpback to top |