g.arboreum_cottongen_reftransV1_0020740, g.arboreum_cottongen_reftransV1_0020740 (contig) Gossypium arboreum

Overview
Nameg.arboreum_cottongen_reftransV1_0020740
Unique Nameg.arboreum_cottongen_reftransV1_0020740
Typecontig
OrganismGossypium arboreum (Tree cotton)
Sequence length3157
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Chr7chromosomeg.arboreum_cottongen_reftransV1_0020740:1..3156 .
Chr7:78672998..78682093 +
Homology
BLAST of g.arboreum_cottongen_reftransV1_0020740 vs. ExPASy TrEMBL
Match: M4DQ59_BRARP (DNA ligase OS=Brassica rapa subsp. pekinensis GN=Bra018652 PE=3 SV=1)

HSP 1 Score: 1032.71 bits (2669), Expect = 0.000e+0
Identity = 524/738 (71.00%), Postives = 612/738 (82.93%), Query Frame = 1
Query:  310 STRPSAFDALMSNARRLAGXXXXXXXXXXXXXXXXXXXXTQNPNPPKTVGSTEVKHDPEVSSDGIGKPINDSPKPDLDEAKKTPDSKKVKVGSTS----ERNAEMKGKIGLLKKKPADFDPNMVACWEKGERVPFLFLSLAFDLISNETGRIVITDIVCNMFRTVIATTPDDLVATVYLAANKVAPAHEGLELGIGDASIIKALAEACGRTESQVKSQYKDKGDLGLVAQASRSSQSMMRKPDPLTVIKVFDTFQLIAKESGKDSQEKKKNRIKSLLVAATDCEPQYLIRLLQTKLRIGFSEQTLLAALGQAAVYNEQHSKPPPNVQSPLEEAAKIVKQVFSILPVYDKIVPALLTGGVWDLPKSCGFTPGVPVGPMLAKPTKGVAEIINKFQDIDFICEYKYDGERAQIHYMENGSVEIYSRNAECNTGKFPDVVAAISRXXXXXXXXXXLDCELVAYDRVQKKILPFQILSTRARKNVVVSEIKVDVCIFAFDILYLDGQPLLHEQLKVRKERLYDSFEEEPGFFQFATALTSNDLEEIQIFLNSAVSSSCEGLIIKTLDRDATYEPSKRSLNWLKLKKDYMESIGDTLDLVPIAAFHGRGKRTGFYGAFLLACYDENNEEFQSICKIGTGFXXXXXXXXXXXXXXKVIPEPKSYYRCSEMMKPDVWFETSEVWEVKAADLTISPVHRAAIGIVDPDKGISLRFPRLVRVREDKTPEQASSSEQVAEMYNAQKHNQ 2511
            S+RPSAFDALMSNAR  A KK +                 Q  NPP++    +++   +  SD +    +DS KP  D      DSKK    S S    ++  EMK KI LLKKKP +FDP  V+CWEKGERVPFLF++LAFDLIS E+GRIVITDI+CNM RTVIATTPDDLVATVYLAAN++APAHEG+ELGIG+ S+IKA++EA GRTESQVK    + GDLGLVA+ SRSSQ+MM KP+ LTV+KVF+TF+ IAKESGKDS EKKK+R+K+LLVAATDCEP YL RLLQ KLR+GFS QT+LAALGQAAVYNE+HSKPPPN +SPLEEAAKIVKQVF++LPVYD IVPALL+GGVW+LPK+C FT GVP+GPMLAKPTKGV EI+NKFQD  F CEYKYDGERAQ+H ME+G+ EIYSRNAE NTGK+PDV  A+SR KK SVKSF+LDCE+VA+DR +KKILPFQILSTRARKNV V++IKV VCIFAFD+LYL+GQ L+ E L +R+E+LY+SFEE+PG+FQFAT LTS+D++EIQ FL+++V   CEGLIIKTL+ DATYEP+KRS NWLKLKKDYM+SIGD++DLVPIAAFHGRGKRTG +GAFLLACYD + EEFQSICKIGTGFSEA LEERS SLRS+VI  PK YYR  + + PDVWFE +EVWEVKAADLTISPVHRAA GIVDPDKGISLRFPRL+RVREDK PE+A+SSEQ+A+MY AQKHN 
Sbjct:    3 SSRPSAFDALMSNARASAAKKKT----------------PQASNPPRSPNKRKIEKTQD--SDLVKTEASDSAKPGSDSPSIAEDSKKGAKKSRSLTQTDKIEEMKSKIALLKKKPGEFDPERVSCWEKGERVPFLFIALAFDLISAESGRIVITDILCNMLRTVIATTPDDLVATVYLAANEIAPAHEGVELGIGEGSVIKAISEAFGRTESQVKKLNTELGDLGLVAKGSRSSQTMMFKPESLTVVKVFNTFRQIAKESGKDSTEKKKDRMKALLVAATDCEPLYLTRLLQAKLRLGFSNQTVLAALGQAAVYNEEHSKPPPNTKSPLEEAAKIVKQVFTVLPVYDIIVPALLSGGVWNLPKTCNFTLGVPIGPMLAKPTKGVGEILNKFQDTVFTCEYKYDGERAQVHCMEDGTFEIYSRNAERNTGKYPDVALALSRLKKPSVKSFILDCEVVAFDREKKKILPFQILSTRARKNVNVNDIKVGVCIFAFDMLYLNGQQLIQENLNIRREKLYESFEEDPGYFQFATTLTSSDIDEIQKFLDASVDIGCEGLIIKTLNSDATYEPAKRSNNWLKLKKDYMDSIGDSVDLVPIAAFHGRGKRTGVFGAFLLACYDADKEEFQSICKIGTGFSEAVLEERSTSLRSRVIATPKQYYRVGDSLNPDVWFEPTEVWEVKAADLTISPVHRAATGIVDPDKGISLRFPRLLRVREDKKPEEATSSEQIADMYQAQKHNH 722          
BLAST of g.arboreum_cottongen_reftransV1_0020740 vs. ExPASy TrEMBL
Match: A0A087HLW6_ARAAL (DNA ligase OS=Arabis alpina GN=AALP_AA1G082300 PE=3 SV=1)

HSP 1 Score: 1031.94 bits (2667), Expect = 0.000e+0
Identity = 528/738 (71.54%), Postives = 616/738 (83.47%), Query Frame = 1
Query:  310 STRPSAFDALMSNARRLAGXXXXXXXXXXXXXXXXXXXXTQNPNPPKTVGSTEVKHDPEVSSDGIGKPINDSPKPDLDEAKKTPDSKKV----KVGSTSERNAEMKGKIGLLKKKPADFDPNMVACWEKGERVPFLFLSLAFDLISNETGRIVITDIVCNMFRTVIATTPDDLVATVYLAANKVAPAHEGLELGIGDASIIKALAEACGRTESQVKSQYKDKGDLGLVAQASRSSQSMMRKPDPLTVIKVFDTFQLIAKESGKDSQEKKKNRIKSLLVAATDCEPQYLIRLLQTKLRIGFSEQTLLAALGQAAVYNEQHSKPPPNVQSPLEEAAKIVKQVFSILPVYDKIVPALLTGGVWDLPKSCGFTPGVPVGPMLAKPTKGVAEIINKFQDIDFICEYKYDGERAQIHYMENGSVEIYSRNAECNTGKFPDVVAAISRXXXXXXXXXXLDCELVAYDRVQKKILPFQILSTRARKNVVVSEIKVDVCIFAFDILYLDGQPLLHEQLKVRKERLYDSFEEEPGFFQFATALTSNDLEEIQIFLNSAVSSSCEGLIIKTLDRDATYEPSKRSLNWLKLKKDYMESIGDTLDLVPIAAFHGRGKRTGFYGAFLLACYDENNEEFQSICKIGTGFXXXXXXXXXXXXXXKVIPEPKSYYRCSEMMKPDVWFETSEVWEVKAADLTISPVHRAAIGIVDPDKGISLRFPRLVRVREDKTPEQASSSEQVAEMYNAQKHNQ 2511
            S+RPSAFDALMS AR  A KK+  +S+P++         TQ+ +  K + S       E+        ++DS KP  D      +SK V    +V S S++  E+K KI LLKKKP DF P  V+CWEKGERVPFLF++LAFDLISNE+GRIVITDI+CNM RTVIATTPDDLVATVYLAAN++APAHEG+ELGIG+ SIIKA++EA GRTE+QVK    + GDLGLVA+ SRSSQ+MM KP+PLTV+KVF+TF+ IAKESGKDS EKKK+R+K+LLVAATDCEP YL RLLQ KLR+GFS QT+LAALGQAAVYNE+HSKPPP  +SPLEEAAKIVKQVF++LPVYD IVPALLTGGVW+LPK+C FT GVP+GPMLAKPTKGV EI+NKFQD  F CEYKYDGERAQ+H ME+G+ EIYSRNAE NTGK+PDV  A+SR KK SVKSF+LDCE+VA+DR +KKILPFQILSTRARKNV V++IKV VCIFAFD+LYL+GQ L+ E LK+R+E+LYDSFEE+PG+FQFATALTS+D++EIQ FL+++V   CEGLIIKTLD DATYEP+KRS NWLKLKKDYM+SIGD++DLVPIAAFHGRGKRTG +GAFLLACYD + EE+QSICKIGTGFSEA LEERS SLRSKVI  PK YYR  + + PDVWFE +EVWEVKAADLTISPVHRAA GIVDP KGISLRFPRL+RVREDK PE A+SSEQ+A+MY AQKHN 
Sbjct:    3 SSRPSAFDALMSKARESAKKKTPQASTPSRSPNKRKIGETQDADLGKALVSEGTVSKIEI--------VSDSEKPRSDSVSIAEESKNVAKKPRVLSQSDKVMELKSKIELLKKKPGDFKPEKVSCWEKGERVPFLFVALAFDLISNESGRIVITDILCNMLRTVIATTPDDLVATVYLAANEIAPAHEGIELGIGEGSIIKAISEAFGRTEAQVKKLNTELGDLGLVAKGSRSSQTMMFKPEPLTVVKVFNTFRQIAKESGKDSTEKKKDRMKALLVAATDCEPLYLTRLLQAKLRLGFSNQTVLAALGQAAVYNEEHSKPPPTTKSPLEEAAKIVKQVFTVLPVYDIIVPALLTGGVWNLPKTCNFTLGVPIGPMLAKPTKGVGEILNKFQDTVFTCEYKYDGERAQVHCMEDGTFEIYSRNAERNTGKYPDVALALSRLKKPSVKSFILDCEVVAFDREKKKILPFQILSTRARKNVNVNDIKVGVCIFAFDMLYLNGQQLIQENLKIRREKLYDSFEEDPGYFQFATALTSSDIDEIQKFLDASVDIGCEGLIIKTLDSDATYEPAKRSNNWLKLKKDYMDSIGDSVDLVPIAAFHGRGKRTGVFGAFLLACYDVDKEEYQSICKIGTGFSEAVLEERSTSLRSKVIATPKQYYRVGDSLNPDVWFEPTEVWEVKAADLTISPVHRAATGIVDPVKGISLRFPRLLRVREDKKPEDATSSEQIADMYQAQKHNH 732          
BLAST of g.arboreum_cottongen_reftransV1_0020740 vs. ExPASy TrEMBL
Match: A0A078E250_BRANA (DNA ligase OS=Brassica napus GN=BnaA06g04600D PE=3 SV=1)

HSP 1 Score: 1029.62 bits (2661), Expect = 0.000e+0
Identity = 523/738 (70.87%), Postives = 612/738 (82.93%), Query Frame = 1
Query:  310 STRPSAFDALMSNARRLAGXXXXXXXXXXXXXXXXXXXXTQNPNPPKTVGSTEVKHDPEVSSDGIGKPINDSPKPDLDEAKKTPDSKKVKVGSTS----ERNAEMKGKIGLLKKKPADFDPNMVACWEKGERVPFLFLSLAFDLISNETGRIVITDIVCNMFRTVIATTPDDLVATVYLAANKVAPAHEGLELGIGDASIIKALAEACGRTESQVKSQYKDKGDLGLVAQASRSSQSMMRKPDPLTVIKVFDTFQLIAKESGKDSQEKKKNRIKSLLVAATDCEPQYLIRLLQTKLRIGFSEQTLLAALGQAAVYNEQHSKPPPNVQSPLEEAAKIVKQVFSILPVYDKIVPALLTGGVWDLPKSCGFTPGVPVGPMLAKPTKGVAEIINKFQDIDFICEYKYDGERAQIHYMENGSVEIYSRNAECNTGKFPDVVAAISRXXXXXXXXXXLDCELVAYDRVQKKILPFQILSTRARKNVVVSEIKVDVCIFAFDILYLDGQPLLHEQLKVRKERLYDSFEEEPGFFQFATALTSNDLEEIQIFLNSAVSSSCEGLIIKTLDRDATYEPSKRSLNWLKLKKDYMESIGDTLDLVPIAAFHGRGKRTGFYGAFLLACYDENNEEFQSICKIGTGFXXXXXXXXXXXXXXKVIPEPKSYYRCSEMMKPDVWFETSEVWEVKAADLTISPVHRAAIGIVDPDKGISLRFPRLVRVREDKTPEQASSSEQVAEMYNAQKHNQ 2511
            S+RPSAFDALMSNAR  A KK +                 Q  NPP++    +++   +  SD +    +DS KP  D      DSKK    S S    ++  EMK KI LLKKKP +FDP  V+CWEKGERVPFLF++LAFDLIS E+GRIVITDI+CNM RTVIATTPDDLVATVYL+AN++APAHEG+ELGIG+ SIIKA++EA GRTESQVK    + GDLGLVA+ SRSSQ+MM KP+ LTV+KVF+TF+ IAKESGKDS EKKK+R+K+LLVAATDCEP YL RLLQ KLR+GFS QT+LAALGQAAVYNE+HSKPPP+ +SPLEEAAKIVKQVF++LPVYD IVPALL+GGVW+LPK+C FT GVP+GPMLAKPTKGV EI+NKFQD  F CEYKYDGERAQ+H ME+G+ EIYSRNAE NTGK+PDV  A+SR KK SVKSF+LDCE+VA+DR +KKILPFQILSTRARKNV V++IKV VCIFAFD+LYL+GQ L+ E L +R+E+LY+SFEE+PG+FQFAT LTS+D++EIQ FL+++V   CEGLIIKTL+ DATYEP+KRS NWLKLKKDYM+SIGD++DLVPIAAFHGRGKRTG +GAFLLACYD + EEFQSICKIGTGFSEA LEERS SLRS+VI  PK YYR  + + PDVWFE +EVWEVKAADLTISPVHRAA GIVDPDKGISLRFPRL+RVREDK PE+A+SSEQ+A+MY AQKHN 
Sbjct:    3 SSRPSAFDALMSNARASAAKKKT----------------PQASNPPRSPNKRKIEKTQD--SDLVKTEASDSAKPGSDPPSIAEDSKKGAKKSRSLTQTDKIEEMKSKIALLKKKPGEFDPERVSCWEKGERVPFLFIALAFDLISAESGRIVITDILCNMLRTVIATTPDDLVATVYLSANEIAPAHEGVELGIGEGSIIKAISEAFGRTESQVKKLNTELGDLGLVAKGSRSSQTMMFKPESLTVVKVFNTFRQIAKESGKDSTEKKKDRMKALLVAATDCEPLYLTRLLQAKLRLGFSNQTVLAALGQAAVYNEEHSKPPPSTKSPLEEAAKIVKQVFTVLPVYDIIVPALLSGGVWNLPKTCNFTLGVPIGPMLAKPTKGVGEILNKFQDTVFTCEYKYDGERAQVHCMEDGTFEIYSRNAERNTGKYPDVALALSRLKKPSVKSFILDCEVVAFDREKKKILPFQILSTRARKNVNVNDIKVGVCIFAFDMLYLNGQQLIQENLNIRREKLYESFEEDPGYFQFATTLTSSDIDEIQKFLDASVDIGCEGLIIKTLNSDATYEPAKRSNNWLKLKKDYMDSIGDSVDLVPIAAFHGRGKRTGVFGAFLLACYDADKEEFQSICKIGTGFSEAVLEERSTSLRSRVIATPKQYYRVGDSLNPDVWFEPTEVWEVKAADLTISPVHRAATGIVDPDKGISLRFPRLLRVREDKKPEEATSSEQIADMYQAQKHNH 722          
BLAST of g.arboreum_cottongen_reftransV1_0020740 vs. ExPASy TrEMBL
Match: A0A078EW74_BRANA (DNA ligase OS=Brassica napus GN=BnaA09g49030D PE=3 SV=1)

HSP 1 Score: 1025 bits (2649), Expect = 0.000e+0
Identity = 542/797 (68.01%), Postives = 640/797 (80.30%), Query Frame = 1
Query:  145 MLTFRPSHLLRYTCCITRPLTPLLPPFSSHILPSN---SPFFRPKPXXXXXXNPHSNMSTRPSAFDALMSNARRLAGXXXXXXXXXXXXXXXXXXXXTQNPNPPK-TVGSTEVKHDP--EVSSDGIGKPINDSPK--PDLDEAKKTPDSKKVKVGSTSERNAEMKGKIGLLKKKPADFDPNMVACWEKGERVPFLFLSLAFDLISNETGRIVITDIVCNMFRTVIATTPDDLVATVYLAANKVAPAHEGLELGIGDASIIKALAEACGRTESQVKSQYKDKGDLGLVAQASRSSQSMMRKPDPLTVIKVFDTFQLIAKESGKDSQEKKKNRIKSLLVAATDCEPQYLIRLLQTKLRIGFSEQTLLAALGQAAVYNEQHSKPPPNVQSPLEEAAKIVKQVFSILPVYDKIVPALLTGGVWDLPKSCGFTPGVPVGPMLAKPTKGVAEIINKFQDIDFICEYKYDGERAQIHYMENGSVEIYSRNAECNTGKFPDVVAAISRXXXXXXXXXXLDCELVAYDRVQKKILPFQILSTRARKNVVVSEIKVDVCIFAFDILYLDGQPLLHEQLKVRKERLYDSFEEEPGFFQFATALTSNDLEEIQIFLNSAVSSSCEGLIIKTLDRDATYEPSKRSLNWLKLKKDYMESIGDTLDLVPIAAFHGRGKRTGFYGAFLLACYDENNEEFQSICKIGTGFXXXXXXXXXXXXXXKVIPEPKSYYRCSEMMKPDVWFETSEVWEVKAADLTISPVHRAAIGIVDPDKGISLRFPRLVRVREDKTPEQASSSEQVAEMYNAQKHNQ 2511
            ML  R S+  R   CI+   T     FSS ++  N   SPF      S S L+  +  S+RPSAFDALMSNAR  A            K+K+   +   +P+P K  +  T+    P  E  SD   KP +DSP    DL +  KT D+   K    +++  E+K +I LLK+KP +FDP  VACWEKGERVPFLF++LAFDL+S E+GRIVITDI+CNM RTVIATTPDDLVA VYLAAN++APAHEG+ELGIG+ SIIKA++EA GRTE+QVK    + GDLGLVA+ SRSSQ+MM KP+PLTV+KVF+TF+ IAKESGKDS EKKK+R+K+LLVAATDCEP YL RLLQ KLR+GFS QT+LAALGQAAVYNE+HSKPPP  +SPLEEAAKIVKQVF++LPVYD IVPALLTGGVW+LPK+C FT GVP+GPMLAKPTKGV EI+NKFQD  F CEYKYDGERAQ+H ME+G+ EIYSRNAE NTGK+PDV  A+SR KK SVKSF+LDCE+VA+DR +KKILPFQILSTRARKNV V++IKV VCIFAFD+LYL+GQ L+ E L +R+E+LY SFEE+PG+FQFATALTS+D++EIQ FL+++V   CEGLIIKT++ DATYEP+KRS NWLKLKKDYM+SIGD++DLVPIAAFHGRGKRTG +GAFLLACYD + EEFQSICKIGTGFSEA LEERS SLRS+VIP PK YYR  + + PDVWFE +EVWEVKAADLTISPVHRAA GIVDPDKGISLRFPRL+RVREDK PE+A+SSEQ+A+MY AQKHN 
Sbjct:    1 MLAIRSSNHFR---CISSLCTKTR--FSSVLVSLNRQVSPF-----PSSSRLHHRAMSSSRPSAFDALMSNARASA------------KKKTTPQASNSSPSPNKRKISKTQDADSPKAEAFSDS-PKPRSDSPSIAEDLKKGAKTQDADLTK----TDKVDELKSRIVLLKRKPGEFDPERVACWEKGERVPFLFVALAFDLVSAESGRIVITDILCNMLRTVIATTPDDLVAAVYLAANEIAPAHEGVELGIGEGSIIKAISEAFGRTEAQVKKLNTELGDLGLVAKGSRSSQTMMFKPEPLTVVKVFNTFRQIAKESGKDSTEKKKDRMKALLVAATDCEPLYLTRLLQAKLRLGFSNQTVLAALGQAAVYNEEHSKPPPKTKSPLEEAAKIVKQVFTVLPVYDIIVPALLTGGVWNLPKTCNFTLGVPIGPMLAKPTKGVGEILNKFQDTVFTCEYKYDGERAQVHCMEDGTFEIYSRNAERNTGKYPDVALALSRLKKPSVKSFILDCEVVAFDREKKKILPFQILSTRARKNVNVNDIKVGVCIFAFDMLYLNGQQLIQENLDIRREKLYGSFEEDPGYFQFATALTSSDIDEIQKFLDASVDIGCEGLIIKTMNSDATYEPAKRSNNWLKLKKDYMDSIGDSVDLVPIAAFHGRGKRTGVFGAFLLACYDADKEEFQSICKIGTGFSEAVLEERSTSLRSRVIPTPKQYYRVGDSLNPDVWFEPTEVWEVKAADLTISPVHRAANGIVDPDKGISLRFPRLLRVREDKKPEEATSSEQIADMYQAQKHNH 770          
BLAST of g.arboreum_cottongen_reftransV1_0020740 vs. ExPASy TrEMBL
Match: M4ES34_BRARP (DNA ligase OS=Brassica rapa subsp. pekinensis GN=Bra031612 PE=3 SV=1)

HSP 1 Score: 1022.69 bits (2643), Expect = 0.000e+0
Identity = 528/758 (69.66%), Postives = 619/758 (81.66%), Query Frame = 1
Query:  310 STRPSAFDALMSNARRLAGXXXXXXXXXXXXXXXXXXXXTQNPNPPK-TVGSTEVKHDP--EVSSDGIGKPINDSPK--PDLDEAKKTPDS-------------------KKVKVGSTSERNAEMKGKIGLLKKKPADFDPNMVACWEKGERVPFLFLSLAFDLISNETGRIVITDIVCNMFRTVIATTPDDLVATVYLAANKVAPAHEGLELGIGDASIIKALAEACGRTESQVKSQYKDKGDLGLVAQASRSSQSMMRKPDPLTVIKVFDTFQLIAKESGKDSQEKKKNRIKSLLVAATDCEPQYLIRLLQTKLRIGFSEQTLLAALGQAAVYNEQHSKPPPNVQSPLEEAAKIVKQVFSILPVYDKIVPALLTGGVWDLPKSCGFTPGVPVGPMLAKPTKGVAEIINKFQDIDFICEYKYDGERAQIHYMENGSVEIYSRNAECNTGKFPDVVAAISRXXXXXXXXXXLDCELVAYDRVQKKILPFQILSTRARKNVVVSEIKVDVCIFAFDILYLDGQPLLHEQLKVRKERLYDSFEEEPGFFQFATALTSNDLEEIQIFLNSAVSSSCEGLIIKTLDRDATYEPSKRSLNWLKLKKDYMESIGDTLDLVPIAAFHGRGKRTGFYGAFLLACYDENNEEFQSICKIGTGFXXXXXXXXXXXXXXKVIPEPKSYYRCSEMMKPDVWFETSEVWEVKAADLTISPVHRAAIGIVDPDKGISLRFPRLVRVREDKTPEQASSSEQVAEMYNAQKHNQ 2511
            S+RPSAFDALMSNAR  A            K+K+   +   +P+P K  +  T+    P  E  SD   KP +DSP    DL +  KT D+                   KK +  S +++  E+K +I LLK+KP +FDP  VACWEKGERVPFLF++LAFDL+S E+GRIVITDI+CNM RTVIATTPDDLVA VYLAAN++APAHEG+ELGIG+ SIIKA++EA GRTE+QVK    + GDLGLVA+ SRSSQ+MM KP+PLTV+KVF+TF+ IAKESGKDS EKKK+R+K+LLVAATDCEP YL RLLQ KLR+GFS QT+LAALGQAAVYNE+HSKPPP  +SPLEEAAKIVKQVF++LPVYD IVPALLTGGVW+LPK+C FT GVP+GPMLAKPTKGV EIINKFQD  F CEYKYDGERAQIH ME+G+ EIYSRNAE NTGK+PDV  A+SR KK SVKSF+LDCE+VA+DR +KKILPFQILSTRARKNV V++IKV VCIFAFD+LYL+GQ L+ E L +R+E+LY SFEE+PG+FQFATALTS+D++EIQ FL+++V   CEGLIIKT++ DATYEP+KRS NWLKLKKDYM+SIGD++DLVPIAAFHGRGKRTG +GAFLLACYD + EEFQSICKIGTGFSEA LEERS SLRS+VIP PK YYR  + + PDVWFE +EVWEVKAADLTISPVHRAA GIVDPDKGISLRFPRL+RVREDK PE+A+SSEQ+A+MY AQKHN 
Sbjct:    3 SSRPSAFDALMSNARASA------------KKKTTPQASNSSPSPNKRKISKTQDADSPKAEAFSDS-PKPRSDSPSIAEDLKKGAKTQDADLTKVEAFSDSAKPRSSIAKKSRTLSQTDKVDELKSRIVLLKRKPGEFDPERVACWEKGERVPFLFVALAFDLVSAESGRIVITDILCNMLRTVIATTPDDLVAAVYLAANEIAPAHEGVELGIGEGSIIKAISEAFGRTEAQVKKLNTELGDLGLVAKGSRSSQTMMFKPEPLTVVKVFNTFRQIAKESGKDSTEKKKDRMKALLVAATDCEPLYLTRLLQAKLRLGFSNQTVLAALGQAAVYNEEHSKPPPKTKSPLEEAAKIVKQVFTVLPVYDIIVPALLTGGVWNLPKTCNFTLGVPIGPMLAKPTKGVGEIINKFQDTVFTCEYKYDGERAQIHCMEDGTFEIYSRNAERNTGKYPDVALALSRLKKPSVKSFILDCEVVAFDREKKKILPFQILSTRARKNVNVNDIKVGVCIFAFDMLYLNGQQLIQENLDIRREKLYGSFEEDPGYFQFATALTSSDIDEIQKFLDASVDIGCEGLIIKTMNSDATYEPAKRSNNWLKLKKDYMDSIGDSVDLVPIAAFHGRGKRTGVFGAFLLACYDADKEEFQSICKIGTGFSEAVLEERSTSLRSRVIPTPKQYYRVGDSLNPDVWFEPTEVWEVKAADLTISPVHRAANGIVDPDKGISLRFPRLLRVREDKKPEEATSSEQIADMYQAQKHNH 747          
BLAST of g.arboreum_cottongen_reftransV1_0020740 vs. ExPASy Swiss-Prot
Match: DNLI1_ARATH (DNA ligase 1 OS=Arabidopsis thaliana GN=LIG1 PE=2 SV=2)

HSP 1 Score: 1056.59 bits (2731), Expect = 0.000e+0
Identity = 543/792 (68.56%), Postives = 646/792 (81.57%), Query Frame = 1
Query:  145 MLTFRPSHLLRYTCCITRPLTPL-LPPFSSHILPSNSPFFRPKPXXXXXXNPHSNMST-RPSAFDALMSNARRLAGXXXXXXXXXXXXXXXXXXXXTQNPNPPKTVGSTEVKHDPEVSSDGIGKPINDSPKPDLDEAKKTPDSKK-VKVGSTSERNAEMKGKIGLLKKKPADFDPNMVACWEKGERVPFLFLSLAFDLISNETGRIVITDIVCNMFRTVIATTPDDLVATVYLAANKVAPAHEGLELGIGDASIIKALAEACGRTESQVKSQYKDKGDLGLVAQASRSSQSMMRKPDPLTVIKVFDTFQLIAKESGKDSQEKKKNRIKSLLVAATDCEPQYLIRLLQTKLRIGFSEQTLLAALGQAAVYNEQHSKPPPNVQSPLEEAAKIVKQVFSILPVYDKIVPALLTGGVWDLPKSCGFTPGVPVGPMLAKPTKGVAEIINKFQDIDFICEYKYDGERAQIHYMENGSVEIYSRNAECNTGKFPDVVAAISRXXXXXXXXXXLDCELVAYDRVQKKILPFQILSTRARKNVVVSEIKVDVCIFAFDILYLDGQPLLHEQLKVRKERLYDSFEEEPGFFQFATALTSNDLEEIQIFLNSAVSSSCEGLIIKTLDRDATYEPSKRSLNWLKLKKDYMESIGDTLDLVPIAAFHGRGKRTGFYGAFLLACYDENNEEFQSICKIGTGFXXXXXXXXXXXXXXKVIPEPKSYYRCSEMMKPDVWFETSEVWEVKAADLTISPVHRAAIGIVDPDKGISLRFPRLVRVREDKTPEQASSSEQVAEMYNAQKHNQ 2511
            ML  R S+ LR   CI    T   +  FSS ++      F  +   L   + H  MS+ RPSAFDALMSNAR  A KK+  +++ ++         TQ+ N    +G T V       ++ + +P++DS  P  D +    DSK   K   T  +  EMK KIGLLKKKP DFDP  ++CWEKGERVPFLF++LAFDLISNE+GRIVITDI+CNM RTVIATTP+DLVATVYL+AN++APAHEG+ELGIG+++IIKA++EA GRTE  VK Q  + GDLGLVA+ SRS+Q+MM KP+PLTV+KVFDTF+ IAKESGKDS EKKKNR+K+LLVA TDCEP YL RLLQ KLR+GFS QT+LAALGQAAVYNE+HSKPPPN +SPLEEAAKIVKQVF++LPVYD IVPALL+GGVW+LPK+C FT GVP+GPMLAKPTKGVAEI+NKFQDI F CEYKYDGERAQIH+ME+G+ EIYSRNAE NTGK+PDV  A+SR KK SVKSF+LDCE+VA+DR +KKILPFQILSTRARKNV V++IKV VCIFAFD+LYL+GQ L+ E LK+R+E+LY+SFEE+PG+FQFATA+TSND++EIQ FL+++V   CEGLIIKTLD DATYEP+KRS NWLKLKKDYM+SIGD++DLVPIAAFHGRGKRTG YGAFLLACYD + EEFQSICKIGTGFS+A L+ERS+SLRS+VI  PK YYR  + + PDVWFE +EVWEVKAADLTISPVHRAA GIVDPDKGISLRFPRL+RVREDK PE+A+SSEQ+A++Y AQKHN 
Sbjct:    1 MLAIRSSNYLR---CIPSLCTKTQISQFSSVLIS-----FSRQISHLRLSSCHRAMSSSRPSAFDALMSNARAAAKKKTPQTTNLSRSPNKRKIGETQDAN----LGKTIVSEGTLPKTEDLLEPVSDSANPRSDTSSIAEDSKTGAKKAKTLSKTDEMKSKIGLLKKKPNDFDPEKMSCWEKGERVPFLFVALAFDLISNESGRIVITDILCNMLRTVIATTPEDLVATVYLSANEIAPAHEGVELGIGESTIIKAISEAFGRTEDHVKKQNTELGDLGLVAKGSRSTQTMMFKPEPLTVVKVFDTFRQIAKESGKDSNEKKKNRMKALLVATTDCEPLYLTRLLQAKLRLGFSGQTVLAALGQAAVYNEEHSKPPPNTKSPLEEAAKIVKQVFTVLPVYDIIVPALLSGGVWNLPKTCNFTLGVPIGPMLAKPTKGVAEILNKFQDIVFTCEYKYDGERAQIHFMEDGTFEIYSRNAERNTGKYPDVALALSRLKKPSVKSFILDCEVVAFDREKKKILPFQILSTRARKNVNVNDIKVGVCIFAFDMLYLNGQQLIQENLKIRREKLYESFEEDPGYFQFATAVTSNDIDEIQKFLDASVDVGCEGLIIKTLDSDATYEPAKRSNNWLKLKKDYMDSIGDSVDLVPIAAFHGRGKRTGVYGAFLLACYDVDKEEFQSICKIGTGFSDAMLDERSSSLRSQVIATPKQYYRVGDSLNPDVWFEPTEVWEVKAADLTISPVHRAATGIVDPDKGISLRFPRLLRVREDKKPEEATSSEQIADLYQAQKHNH 780          
BLAST of g.arboreum_cottongen_reftransV1_0020740 vs. ExPASy Swiss-Prot
Match: DNLI1_XENLA (DNA ligase 1 OS=Xenopus laevis GN=lig1 PE=2 SV=1)

HSP 1 Score: 639.802 bits (1649), Expect = 0.000e+0
Identity = 319/633 (50.39%), Postives = 439/633 (69.35%), Query Frame = 1
Query:  652 FDPNMVACWEKGERVPFLFLSLAFDLISNETGRIVITDIVCNMFRTVIATTPDDLVATVYLAANKVAPAHEGLELGIGDASIIKALAEACGRTESQVKSQYKDKGDLGLVAQASRSSQSMMRKPDPLTVIKVFDTFQLIAKESGKDSQEKKKNRIKSLLVAATDCEPQYLIRLLQTKLRIGFSEQTLLAALGQAAVYNEQHSKPPPNV------------QSPLEEAAKIVKQVFSILPVYDKIVPALLTGGVWDLPKSCGFTPGVPVGPMLAKPTKGVAEIINKFQDIDFICEYKYDGERAQIHYMENGSVEIYSRNAECNTGKFPDVVAAISRXXXXXXXXXXLDCELVAYDRVQKKILPFQILSTRARKNVVVSEIKVDVCIFAFDILYLDGQPLLHEQLKVRKERLYDSFEEEPGFFQFATALTSNDLEEIQIFLNSAVSSSCEGLIIKTLDRDATYEPSKRSLNWLKLKKDYMESIGDTLDLVPIAAFHGRGKRTGFYGAFLLACYDENNEEFQSICKIGTGFXXXXXXXXXXXXXXKVIPEPKSYYRCSEMMKPDVWFETSEVWEVKAADLTISPVHRAAIGIVDPDKGISLRFPRLVRVREDKTPEQASSSEQVAEMYNAQKHNQT 2514
            + P   ACW  G++VP+L ++  F+ I  E+ R+   + + N  R+VIA TP+DL+  +YL  N++ PA+EGLELGIG+  ++KA+A+A GR   ++K++ ++KGDLGLVA++SRS+Q  M  P  L    VF   + IA+ +G  S  KK + IK L VA    E +Y+ R L  KLRIG +EQ++L+++ QA          PP V            +S +EE A I+KQ F  LP YD I+P LL  G+ DLPK C  TPG+P+ PMLA PTKG+ E++ +F +  F CEYKYDGERAQIH +ENG V +YSRN E NT K+PD+++ I + KK SVKS +LD E VA D  +K+I PFQ+L+TR RK+V  SEIKV VC++AFD+LYL+G+ L+ E    R++ L DSF E  G F FAT +  ++ +EI  FL+ ++  SCEGL++KTL++DATYE +KRS NWLKLKKDY+E +GDTLDLV I A+ G+GKRTG YG FLLA YDE +EE+Q+ICKIGTGF++ +LE+    L+  VI  P+SYYR     +PD WF+  +VWEVK ADL+ISPVH+AA+G+V+  KGISLRFPR +R+R+DK PE++++S QVA++Y  Q+  Q 
Sbjct:  426 YHPIDDACWCNGQKVPYLAVARTFERIEEESARLKNVETLSNFLRSVIALTPEDLLPCIYLCLNRLGPAYEGLELGIGETILMKAVAQATGRQLEKIKAEAQEKGDLGLVAESSRSNQRTMFTPPKLMASGVFGKLKDIARMTGNASMNKKIDIIKGLFVACRHSEARYIARSLGGKLRIGLAEQSVLSSIAQAVCLTPPGRDAPPTVMDAGKGMSADARKSWIEEKAMILKQTFCELPNYDAIIPILLEHGIDDLPKHCRLTPGIPLKPMLAHPTKGIGEVLKRFDEAAFTCEYKYDGERAQIHILENGEVHVYSRNQENNTTKYPDIISRIPKIKKESVKSCILDTEAVAGDAEKKQIQPFQVLTTRKRKDVDASEIKVQVCVYAFDMLYLNGESLVKEPFAKRRQLLRDSFLETEGQFMFATYMDKSNTDEISEFLDQSIKDSCEGLMVKTLEQDATYEIAKRSHNWLKLKKDYLEGVGDTLDLVVIGAYLGKGKRTGIYGGFLLASYDEESEEYQTICKIGTGFTDDDLEKHYNFLKDHVIENPRSYYRWDSATEPDHWFDPVQVWEVKCADLSISPVHKAALGLVEDQKGISLRFPRFLRIRDDKKPEESTNSFQVADLYRKQQQIQN 1058          
BLAST of g.arboreum_cottongen_reftransV1_0020740 vs. ExPASy Swiss-Prot
Match: DNLI1_DICDI (DNA ligase 1 OS=Dictyostelium discoideum GN=lig1 PE=3 SV=1)

HSP 1 Score: 630.172 bits (1624), Expect = 0.000e+0
Identity = 320/666 (48.05%), Postives = 462/666 (69.37%), Query Frame = 1
Query:  550 KKTPDSKKVKVGSTSERNAEMKGKIGLLKKKPADFDPNMVACWEKGERVPFLFLSLAFDLISNETGRIVITDIVCNMFRTVIATTPDDLVATVYLAANKVAPAHEGLELGIGDASIIKALAEACGRTESQVKSQYKDKGDLGLVAQASRSSQSMMRKPDPLTVIKVFDTFQLIAKESGKDSQEKKKNRIKSLLVAATDCEPQYLIRLLQTKLRIGFSEQTLLAALGQAA------------VYNEQHSKPPPNVQSPLEEAAKIVKQVFSILPVYDKIVPALL-TGGVWDLPKSCGFTPGVPVGPMLAKPTKGVAEIINKFQDIDFICEYKYDGERAQIHYMENGSVEIYSRNAECNTGKFPDVVAAISRXXXXXXXXXXLDCELVAYDRVQKKILPFQILSTRARKNVVVSEIKVDVCIFAFDILYLDGQPLLHEQLKVRKERLYDSFEEEPGFFQFATALTSNDLEEIQIFLNSAVSSSCEGLIIKTLDRDATYEPSKRSLNWLKLKKDYMESIGDTLDLVPIAAFHGRGKRTGFYGAFLLACYDENNEEFQSICKIGTGFXXXXXXXXXXXXXXKVIPEPKSYYRCSEMMKPDVWFETSEVWEVKAADLTISPVHRAAIGIVDPDKGISLRFPRLVRVREDKTPEQASSSEQVAEMYNAQKHN 2508
            KK P SKK     T + + ++ GK          + P   A W+KGE VP++ L+  F+++ + + R++I + + N+FR+++  +P DLV T+YL+ NK+ P+++  ELGIG+  +IK+LAE+ GR+   +K +  + GDLG++AQ SRS+Q++M KP PLT+  VF TFQ IA  SG   Q+KKK+ IK LLV+  DCE  Y+IR LQ KLRIG +E+++L AL ++             +++ +        +   +     V + +S LP YD  VP L+   G+ ++  +C    G+PV PMLA+PT G+++++++F D++F CE+KYDGERAQIH + +G+  IY+RN E  T K+PD+VA +++F   +VKSF+LDCE VA+D   KKIL FQ+LSTRARK+V +S+IKV VC+FAFD+LYL+GQ L+ E L  R+E L ++F    G F FA     +D+ +IQ +L  AV  +CEGL++KTL   + YEPS+RS NWLK+KKDYM+ + D+LDLVPI A++G+GKRTG YGA+LLACYDENNEEFQ++CKIGTGFS+ +L   ++ L+  +I +P++ +R S+ +KPDVWF  S VWEV AADL+ISPVH AA GI+DP+KGI+LRFPR +R+R DK+PE A+SS+QV +MY  QK N
Sbjct:  524 KKVPISKKKGNAKTIQADLKVIGK----------YRPIEDAQWKKGEAVPYMVLAKTFEMMESTSSRLIIIEHLANLFRSIMLLSPKDLVMTIYLSINKIGPSYQSKELGIGEHVLIKSLAESTGRSVDVIKQELTEVGDLGIIAQNSRSTQTLMGKPTPLTIQSVFKTFQQIADLSGTGGQQKKKDLIKKLLVSCKDCETLYIIRSLQGKLRIGLAERSVLMALAKSVLVTPPIDGSGQQIFDIRKQMKQEEFEERYQNVVSKVTRAYSQLPNYDLFVPHLIAVNGIDNILSTCSLKVGIPVKPMLAQPTTGISQMLDRFSDMEFTCEFKYDGERAQIHRLPDGTTHIYTRNLEDYTQKYPDIVANVTKFVGPNVKSFILDCEAVAFDAATKKILSFQVLSTRARKSVQLSQIKVPVCVFAFDLLYLNGQSLIDEPLIKRREHLVENFIASDGVFAFAKYSNISDVNDIQSYLEEAVEGNCEGLMVKTLKEKSIYEPSRRSYNWLKIKKDYMQGMTDSLDLVPIGAWYGKGKRTGTYGAYLLACYDENNEEFQTLCKIGTGFSDEQLTTFTSQLKPHLINQPRNQFRFSDSIKPDVWFSPSCVWEVLAADLSISPVHTAASGILDPNKGIALRFPRFIRIRPDKSPEDATSSDQVVDMYQNQKIN 1179          
BLAST of g.arboreum_cottongen_reftransV1_0020740 vs. ExPASy Swiss-Prot
Match: DNLI1_HUMAN (DNA ligase 1 OS=Homo sapiens GN=LIG1 PE=1 SV=1)

HSP 1 Score: 621.313 bits (1601), Expect = 0.000e+0
Identity = 311/633 (49.13%), Postives = 439/633 (69.35%), Query Frame = 1
Query:  649 DFDPNMVACWEKGERVPFLFLSLAFDLISNETGRIVITDIVCNMFRTVIATTPDDLVATVYLAANKVAPAHEGLELGIGDASIIKALAEACGRTESQVKSQYKDKGDLGLVAQASRSSQSMMRKPDPLTVIKVFDTFQLIAKESGKDSQEKKKNRIKSLLVAATDCEPQYLIRLLQTKLRIGFSEQTLLAALGQAAVYNEQHSKPPPNV------------QSPLEEAAKIVKQVFSILPVYDKIVPALLTGGVWDLPKSCGFTPGVPVGPMLAKPTKGVAEIINKFQDIDFICEYKYDGERAQIHYMENGSVEIYSRNAECNTGKFPDVVAAISRXXXXXXXXXXLDCELVAYDRVQKKILPFQILSTRARKNVVVSEIKVDVCIFAFDILYLDGQPLLHEQLKVRKERLYDSFEEEPGFFQFATALTSNDLEEIQIFLNSAVSSSCEGLIIKTLDRDATYEPSKRSLNWLKLKKDYMESIGDTLDLVPIAAFHGRGKRTGFYGAFLLACYDENNEEFQSICKIGTGFXXXXXXXXXXXXXXKVIPEPKSYYRCSEMMKPDVWFETSEVWEVKAADLTISPVHRAAIGIVDPDKGISLRFPRLVRVREDKTPEQASSSEQVAEMYNAQKHNQ 2511
            ++ P   ACW+ G++VP+L ++  F+ I   + R+ + + + N+ R+V+A +P DL+  +YL+ N + P  +GLELG+GD  ++KA+A+A GR    V+++  +KGD+GLVA+ SRS+Q +M  P PLT   VF  F+ IA+ +G  S  KK + IK L VA    E +++ R L  +LR+G +EQ++LAAL QA        + PP +            ++ LEE   I+KQ F  +P  D+I+P LL  G+  LP+ C  +PG+P+ PMLA PT+G++E++ +F++  F CEYKYDG+RAQIH +E G V+I+SRN E NTGK+PD+++ I + K  SV SF+LD E VA+DR +K+I PFQ+L+TR RK V  SEI+V VC++AFD++YL+G+ L+ E L  R++ L ++F E  G F FAT+L + D+E+I  FL  +V  SCEGL++KTLD DATYE +KRS NWLKLKKDY++ +GDTLDLV I A+ GRGKR G YG FLLA YDE++EE Q+ICK+GTGFS+ ELEE   SL++ V+P P+ Y R    + PD W + S VWEVK ADL++SP++ AA G+VD DKGISLRFPR +RVREDK PEQA++S QVA +Y  Q   Q
Sbjct:  272 NYHPVEDACWKPGQKVPYLAVARTFEKIEEVSARLRMVETLSNLLRSVVALSPPDLLPVLYLSLNHLGPPQQGLELGVGDGVLLKAVAQATGRQLESVRAEAAEKGDVGLVAENSRSTQRLMLPPPPLTASGVFSKFRDIARLTGSASTAKKIDIIKGLFVACRHSEARFIARSLSGRLRLGLAEQSVLAALSQAVSLTPPGQEFPPAMVDAGKGKTAEARKTWLEEQGMILKQTFCEVPDLDRIIPVLLEHGLERLPEHCKLSPGIPLKPMLAHPTRGISEVLKRFEEAAFTCEYKYDGQRAQIHALEGGEVKIFSRNQEDNTGKYPDIISRIPKIKLPSVTSFILDTEAVAWDREKKQIQPFQVLTTRKRKEVDASEIQVQVCLYAFDLIYLNGESLVREPLSRRRQLLRENFVETEGEFVFATSLDTKDIEQIAEFLEQSVKDSCEGLMVKTLDVDATYEIAKRSHNWLKLKKDYLDGVGDTLDLVVIGAYLGRGKRAGRYGGFLLASYDEDSEELQAICKLGTGFSDEELEEHHQSLKALVLPSPRPYVRIDGAVIPDHWLDPSAVWEVKCADLSLSPIYPAARGLVDSDKGISLRFPRFIRVREDKQPEQATTSAQVACLYRKQSQIQ 904          
BLAST of g.arboreum_cottongen_reftransV1_0020740 vs. ExPASy Swiss-Prot
Match: DNLI1_MOUSE (DNA ligase 1 OS=Mus musculus GN=Lig1 PE=1 SV=2)

HSP 1 Score: 620.928 bits (1600), Expect = 0.000e+0
Identity = 317/656 (48.32%), Postives = 445/656 (67.84%), Query Frame = 1
Query:  586 STSERNAEMKGKIGLLKKKPA--DFDPNMVACWEKGERVPFLFLSLAFDLISNETGRIVITDIVCNMFRTVIATTPDDLVATVYLAANKVAPAHEGLELGIGDASIIKALAEACGRTESQVKSQYKDKGDLGLVAQASRSSQSMMRKPDPLTVIKVFDTFQLIAKESGKDSQEKKKNRIKSLLVAATDCEPQYLIRLLQTKLRIGFSEQTLLAALGQAAVYNEQHSKPPPNVQSP------------------LEEAAKIVKQVFSILPVYDKIVPALLTGGVWDLPKSCGFTPGVPVGPMLAKPTKGVAEIINKFQDIDFICEYKYDGERAQIHYMENGSVEIYSRNAECNTGKFPDVVAAISRXXXXXXXXXXLDCELVAYDRVQKKILPFQILSTRARKNVVVSEIKVDVCIFAFDILYLDGQPLLHEQLKVRKERLYDSFEEEPGFFQFATALTSNDLEEIQIFLNSAVSSSCEGLIIKTLDRDATYEPSKRSLNWLKLKKDYMESIGDTLDLVPIAAFHGRGKRTGFYGAFLLACYDENNEEFQSICKIGTGFXXXXXXXXXXXXXXKVIPEPKSYYRCSEMMKPDVWFETSEVWEVKAADLTISPVHRAAIGIVDPDKGISLRFPRLVRVREDKTPEQASSSEQVAEMYN 2493
            S + R  E KG +      P+  ++ P   ACW+ G++VPFL ++  F+ I   + R+ + + + N+ R+V+A +P DL+  +YL+ N++ P  +GLELG+GD  ++KA+A+A GR    ++++  +KGD+GLVA+ SRS+Q +M  P PLT+  VF  F  IA+ +G  S  KK + IK L VA    E +Y+ R L  +LR+G +EQ++LAAL QA       S  PP  + P                  LEE   I+KQ F  +P  D+I+P LL  G+  LP+ C  +PGVP+ PMLA PT+GV+E++ +F+++DF CEYKYDG+RAQIH +E G V+I+SRN E NTGK+PD+++ I + K  SV SF+LD E VA+DR +K+I PFQ+L+TR RK V  SEI+V VC++AFD++YL+G+ L+ + L  R++ L ++F E  G F F T+L + D E+I  FL  +V  SCEGL++KTLD DATYE +KRS NWLKLKKDY++ +GDTLDLV I A+ GRGKR G YG FLLA YDE +EE Q+ICK+GTGFS+ ELEE   SL++ V+P P+ Y R    + PD W + S VWEVK ADL++SP++ AA G+VD +KGISLRFPR +RVR+DK PEQA++S QVA +Y 
Sbjct:  247 SGTLRKEETKGTLDPANYNPSKNNYHPIEDACWKHGQKVPFLAVARTFEKIEEVSARLKMVETLSNLLRSVVALSPPDLLPVLYLSLNRLGPPQQGLELGVGDGVLLKAVAQATGRQLESIRAEVAEKGDVGLVAENSRSTQRLMLPPPPLTISGVFTKFCDIARLTGSASMAKKMDIIKGLFVACRHSEARYIARSLSGRLRLGLAEQSVLAALAQAV------SLTPPGQEFPTVVVDAGKGKTAEARKMWLEEQGMILKQTFCEVPDLDRIIPVLLEHGLERLPEHCKLSPGVPLKPMLAHPTRGVSEVLKRFEEVDFTCEYKYDGQRAQIHVLEGGEVKIFSRNQEDNTGKYPDIISRIPKIKHPSVTSFILDTEAVAWDREKKQIQPFQVLTTRKRKEVDASEIQVQVCLYAFDLIYLNGESLVRQPLSRRRQLLRENFVETEGEFVFTTSLDTKDTEQIAEFLEQSVKDSCEGLMVKTLDVDATYEIAKRSHNWLKLKKDYLDGVGDTLDLVVIGAYLGRGKRAGRYGGFLLAAYDEESEELQAICKLGTGFSDEELEEHHQSLQALVLPTPRPYVRIDGAVAPDHWLDPSIVWEVKCADLSLSPIYPAARGLVDKEKGISLRFPRFIRVRKDKQPEQATTSNQVASLYR 896          
BLAST of g.arboreum_cottongen_reftransV1_0020740 vs. ExPASy Swiss-Prot
Match: DNLI1_RAT (DNA ligase 1 OS=Rattus norvegicus GN=Lig1 PE=2 SV=1)

HSP 1 Score: 613.994 bits (1582), Expect = 0.000e+0
Identity = 314/656 (47.87%), Postives = 443/656 (67.53%), Query Frame = 1
Query:  586 STSERNAEMKGKIGLLKKKPA--DFDPNMVACWEKGERVPFLFLSLAFDLISNETGRIVITDIVCNMFRTVIATTPDDLVATVYLAANKVAPAHEGLELGIGDASIIKALAEACGRTESQVKSQYKDKGDLGLVAQASRSSQSMMRKPDPLTVIKVFDTFQLIAKESGKDSQEKKKNRIKSLLVAATDCEPQYLIRLLQTKLRIGFSEQTLLAALGQAAVYNEQHSKPPPNVQSP------------------LEEAAKIVKQVFSILPVYDKIVPALLTGGVWDLPKSCGFTPGVPVGPMLAKPTKGVAEIINKFQDIDFICEYKYDGERAQIHYMENGSVEIYSRNAECNTGKFPDVVAAISRXXXXXXXXXXLDCELVAYDRVQKKILPFQILSTRARKNVVVSEIKVDVCIFAFDILYLDGQPLLHEQLKVRKERLYDSFEEEPGFFQFATALTSNDLEEIQIFLNSAVSSSCEGLIIKTLDRDATYEPSKRSLNWLKLKKDYMESIGDTLDLVPIAAFHGRGKRTGFYGAFLLACYDENNEEFQSICKIGTGFXXXXXXXXXXXXXXKVIPEPKSYYRCSEMMKPDVWFETSEVWEVKAADLTISPVHRAAIGIVDPDKGISLRFPRLVRVREDKTPEQASSSEQVAEMYN 2493
            S + R  E KG        P+  ++ P   ACW+ G++VPFL ++  F+ I   + R+ + + + N+ R+V+A +P DL+  +YL+ N++ P  +GLELG+GD  ++KA+A+A GR    ++++  +KGD+GLVA+ SRS+Q +M    PLTV  VF  F  IA+ +G  S  KK + IK L VA    E +++ R L  +LR+G +EQ++LAAL QA       S  PP  + P                  LEE   I+KQ F  +P  D+I+P LL  G+  LP+ C  +PGVP+ PMLA PT+GV E++ +F+++DF CEYKY G+RAQIH +E G V+I+SRN E N+GK+PD+++ I + K  SV SF+LD E VA+DR +K+I PFQ+L+TR RK V  SEI+V VC++AFD++YL+G+ L  + L  R++ L ++F E  G F FAT+L + D+E+I  FL  +V  SCEGL++KTLD DATYE +KRS NWLKLKKDY+E +GDTLDLV I A+ GRGKR G YG FLLA YDE +EE  +ICK+GTGFS+ ELEE   ++++ ++P P+ Y R    + P+ W + S VWEVK ADLT+SP++RAA G+VD +KGISLRFPR +RVREDK PEQA++S+QVA +Y 
Sbjct:  249 SDTPRKEETKGAPDPTNYNPSKSNYHPIEDACWKHGQKVPFLAVARTFEKIEEVSARLKMVETLSNLLRSVVALSPTDLLPVLYLSLNRLGPPQQGLELGVGDGVLLKAVAQATGRQLESIRAEVAEKGDVGLVAENSRSTQRLMLPSPPLTVSGVFTKFCDIARLTGSASMAKKMDIIKGLFVACRYSEARFIARSLSGRLRLGLAEQSVLAALAQAG------SLTPPGQEFPTVVVDAGKGKTAEARKMWLEEQGMILKQTFCEVPDLDRIIPVLLEHGLESLPEHCKLSPGVPLKPMLAHPTRGVREVLKRFEEVDFTCEYKYYGQRAQIHVLEGGEVKIFSRNQEDNSGKYPDIISRIPKIKHPSVTSFILDTEAVAWDREKKQIQPFQVLTTRKRKEVDASEIQVQVCLYAFDLIYLNGESLARQPLSRRRQLLRENFVETEGEFVFATSLDTKDIEQIAEFLEQSVKDSCEGLMVKTLDVDATYEIAKRSHNWLKLKKDYLEGVGDTLDLVVIGAYLGRGKRPGRYGGFLLAAYDEESEELAAICKLGTGFSDEELEEHHQNMQALLLPTPRPYVRIDGAVAPNHWLDPSIVWEVKCADLTLSPIYRAARGMVDKEKGISLRFPRFIRVREDKQPEQATTSDQVASLYR 898          
BLAST of g.arboreum_cottongen_reftransV1_0020740 vs. ExPASy Swiss-Prot
Match: DNLI1_DROME (DNA ligase 1 OS=Drosophila melanogaster GN=DNA-ligI PE=1 SV=2)

HSP 1 Score: 602.053 bits (1551), Expect = 0.000e+0
Identity = 319/725 (44.00%), Postives = 457/725 (63.03%), Query Frame = 1
Query:  427 TQNPNPPKTV----GSTEVKHDPEVSSDGIG------------------KPINDSPKPDLDEAKKTPDSKKVKVGSTSERNAEMKGKIGLLKKKPADFDPNMVACWEKGERVPFLFLSLAFDLISNETGRIVITDIVCNMFRTVIATTPDDLVATVYLAANKVAPAHEGLELGIGDASIIKALAEACGRTESQVKSQYKDKGDLGLVAQASRSSQSMMRKPDPLTVIKVFDTFQLIAKESGKDSQEKKKNRIKSLLVAATDCEPQYLIRLLQTKLRIGFSEQTLLAALGQAAVYNE-----QHSKPPPNVQSPLEEAAKIVKQVFSILPVYDKIVPALLTGGVWDLPKSCGFTPGVPVGPMLAKPTKGVAEIINKFQDIDFICEYKYDGERAQIHYMENGSVEIYSRNAECNTGKFPDVVAAISRXXXXXXXXXXLDCELVAYDRVQKKILPFQILSTRARKNVVVSEIKVDVCIFAFDILYLDGQPLLHEQLKVRKERLYDSFEEEPGFFQFATALTSNDLEEIQIFLNSAVSSSCEGLIIKTLDRDATYEPSKRSLNWLKLKKDYMESIGDTLDLVPIAAFHGRGKRTGFYGAFLLACYDENNEEFQSICKIGTGFXXXXXXXXXXXXXXKVIPEPKSYYRCSEMMKPDVWFETSEVWEVKAADLTISPVHRAAIGIVDPDKGISLRFPRLVRVREDKTPEQASSSEQVAEMYNAQ---KHNQ 2511
            T +P+PPK V      TE+  +P + S+                      P+ +  K   +   KT D K   +G  S   A  K  +         + P   A W+  +  P+L L+  F +I    GR+ + D + N F +V+  +P+DLV +VYL+ N++APA+EGLELG+ + +++KA+ +A GR  + +KSQ +  GDLG+VA+ SR SQ MM +P PL V  VF   + IAK SG    + K + + ++ VA    E ++ IR L  KLRIG +EQ+LL AL    V        + SK P   +  + +   ++K  +   P YD I+PA+L   + +L + C   PG+P+ PMLA+PTKGV E+  +F  +   CE+KYDGERAQIH  E G + I+SRN+E NT K+PD++A  +   K  VKS+++D E+VA+D  +K+ILPFQ+LSTR RKNV + EIKV VC++ FD+LY++G  L+ + L  R++ L + F+E  G ++FATAL +ND++E+Q FL  ++  +CEGL++KTLD +ATYE +KRS NWLKLKKDY+ ++GD+LDLV I  + G+G+RTG YG FLLACYD  NEE+QSICKIGTGF++ +L+  S  L   V    KSYYR    ++PD WFE  +VWEVK ADL++SP+HRAAIGIVD ++GISLRFPR +R+R+DK  E A+ + QVA MY +Q   K+NQ
Sbjct:   16 TDSPSPPKKVPKIDAKTELPDEPHIKSESASPETKPKVEPMSVDSEEKTSPVKNVKKEPKEVDDKTTDKKVTTIGLNS--TAATKEDVENYDPSADSYHPLKNAYWKDKKVTPYLALARTFQVIEETKGRLKMIDTLSNFFCSVMLVSPEDLVPSVYLSINQLAPAYEGLELGVAETTLMKAICKATGRNLAHIKSQTQLTGDLGIVAEQSRVSQRMMFQPAPLNVRDVFRKLREIAKLSG----QSKMDLVYNMFVACRSSEARFFIRSLIGKLRIGIAEQSLLTALAIGLVKKNHIDDCKASKVPDVYKDEIVDTTLLLKTAYCQCPNYDIIIPAILKYDIKELQERCPMHPGMPLRPMLAQPTKGVHEVFERFGGMQITCEWKYDGERAQIHRNEKGEISIFSRNSENNTAKYPDLIARSTALLKGDVKSYIIDSEIVAWDVERKQILPFQVLSTRKRKNVDIEEIKVQVCVYIFDLLYINGTALVTKNLSERRKLLLEHFQEVEGEWKFATALDTNDIDEVQQFLEESIKGNCEGLMVKTLDEEATYEIAKRSRNWLKLKKDYLSNVGDSLDLVVIGGYKGKGRRTGTYGGFLLACYDTENEEYQSICKIGTGFTDEDLQTHSEFLGKHVTSAAKSYYRYDPSLEPDHWFEPVQVWEVKCADLSLSPIHRAAIGIVDGERGISLRFPRFIRIRDDKNSENATDANQVAHMYQSQDQVKNNQ 734          
BLAST of g.arboreum_cottongen_reftransV1_0020740 vs. ExPASy Swiss-Prot
Match: DNLI1_SCHPO (DNA ligase 1 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=cdc17 PE=3 SV=1)

HSP 1 Score: 571.237 bits (1471), Expect = 0.000e+0
Identity = 293/597 (49.08%), Postives = 400/597 (67.00%), Query Frame = 1
Query:  718 AFDLISNETGRIVITDIVCNMFRTVIATTPDDLVATVYLAANKVAPAHEGLELGIGDASIIKALAEACGRTESQVKSQYKDKGDLGLVAQASRSSQSMMRKPDPLTVIKVFDTFQLIAKESGKDSQEKKKNRIKSLLVAATDCEPQYLIRLLQTKLRIGFSEQTLLAALGQAAVYNEQHSKPPPNVQSPLEEAAKIVKQVFSILPVYDKIVPALLTGGVWDLPKSCGFTPGVPVGPMLAKPTKGVAEIINKFQDIDFICEYKYDGERAQIHYMENGSVEIYSRNAECNTGKFPDVVAAISRXXXXXXXXXXLDCELVAYDRVQKKILPFQILSTRARKNVVVSEIKVDVCIFAFDILYLDGQPLLHEQLKVRKERLYDSFEEEPGFFQFATALTSNDLEEIQIFLNSAVSSSCEGLIIKTLDR-DATYEPSKRSLNWLKLKKDYMESIGDTLDLVPIAAFHGRGKRTGFYGAFLLACYDENNEEFQSICKIGTGFXXXXXXXXXXXXXXKVIPEPKSYYRCSEM--MKPDVWFETSEVWEVKAADLTISPVHRAAIGIVDPDKGISLRFPRLVRVREDKTPEQASSSEQVAEMYNAQ 2499
            AF  I N + R+ I DI+   F  ++   P DL+A VYL+ NK+ P + GLELGIG++ I+KA+ E+ G+T  Q+K  +   GDLGLVAQ SR +Q  M KP  LT+  +FD+ + IA+ SG  SQ +K   IK LL +    EP+YLIR L+ KLR+  +E+T+L AL  A              Q    E  +I++ V+  LP YD IVP L+  G+  L ++C  TPG+P  PMLAKPTK ++E++N F    F CEYKYDGERAQ+H+ E+G   ++SRN+E  + ++PD+  ++S++KK   +SF+LDCE V +DR + KILPFQ L+TR RK+V + +IKV  C+FAFDILYL+GQPLL   L  R++ LY  F+   G F FA       +E I+ FL  +V  SCEGL++K L+  D+ YEPSKRS +WLK+KKDY+  +GD+LDL+ I A++G+GKRT  YGAFLL CYD + E  QSICK+GTGFSE  LE     L+  VI + K +Y  S++   +PDVWFE   +WEV AADL++SPV++AAIG V  DKGISLRFPR +R+REDK+ E A++SEQV+E Y +Q
Sbjct:  155 AFTKIENTSKRLEIIDIMGTYFFGILRDHPSDLLACVYLSINKLGPDYSGLELGIGESIIMKAIGESTGQTLQQIKLSFHKVGDLGLVAQTSRQNQPTMFKPAALTIPFLFDSLKKIAQMSGNQSQNRKIGVIKRLLSSCEGAEPKYLIRALEGKLRLQLAEKTILVALANATAQYHADKNGEKLSQQDRIEGEQILRDVYCQLPSYDLIVPHLIEHGLGTLRETCKLTPGIPTKPMLAKPTKQISEVLNTFDQAAFTCEYKYDGERAQVHFTEDGKFYVFSRNSENMSVRYPDISVSVSKWKKPDARSFILDCEAVGWDRDENKILPFQKLATRKRKDVKIGDIKVRACLFAFDILYLNGQPLLETPLNERRKLLYSMFQPSTGDFTFAKHSDQKSIESIEEFLEESVKDSCEGLMVKMLEGPDSHYEPSKRSRHWLKVKKDYLSGVGDSLDLIVIGAYYGKGKRTSVYGAFLLGCYDPDTETVQSICKLGTGFSEEHLETFYNQLKDIVISKKKDFYAHSDVPAHQPDVWFEPKYLWEVLAADLSLSPVYKAAIGYVQEDKGISLRFPRFIRIREDKSWEDATTSEQVSEFYRSQ 751          
BLAST of g.arboreum_cottongen_reftransV1_0020740 vs. ExPASy Swiss-Prot
Match: DNLI1_CAEEL (DNA ligase 1 OS=Caenorhabditis elegans GN=lig-1 PE=3 SV=2)

HSP 1 Score: 548.895 bits (1413), Expect = 5.305e-179
Identity = 286/611 (46.81%), Postives = 405/611 (66.28%), Query Frame = 1
Query:  676 WEKGERVPFLFLSLAFDLISNETGRIVITDIVCNMFRTVIATTPDDLVATVYLAANKVAPAHEGLELGIGDASIIKALAEACGRTESQVKSQYKDKGDLGLVAQASRSSQSMMRKPDPLTVIKVFDTFQLIAKESGKDSQEKKKNRIKSLLVAATDCEPQYLIRLLQTKLRIGFSEQTLLAALGQAAVYNE-QHSKPPPNVQSPLEEA-AKIVKQVFSILPVYDKIVPALLTGGVWDLPKSCGFTPGVPVGPMLAKPTKGVAEIINKFQDIDFICEYKYDGERAQIHYMENGSVEIYSRNAECNTGKFPDVVAAISRXXXXXXXXXXLDCELVAYDRVQKKILPFQILSTRARKNVVVSEIKVDVCIFAFDILYLDGQPLLHEQLKVRKERLYDSFEEEPGFFQFATALTSNDLEEIQIFLNSAVSSSCEGLIIKTLDRDATYEPSKRSLNWLKLKKDYMESIGDTLDLVPIAAFHGRGKRTGFYGAFLLACYDENNEEFQSICKIGTGFXXXXXXXXXXXXXXKVIPEPKSYYRCSEMMKPDVWFETSEVWEVKAADLTISPVHRAAIGIVDPDKGISLRFPRLVRVREDKTPEQASSSEQVAEMYNAQK 2502
            W KG +VP+   +L  + I   +G+  + D +   F  V+  +PDDL A VY++ N++ P++EGLELG+ + S+IKA+A+A GRTE ++K   + KGDLG VAQ SRS+Q M+  P  LTV  VF+    IAK SG  +  KK + I +LL+A    E ++L+R+L  K+RIG  EQ++L+ALG A   ++    K   +    L++A  K VK  +   P Y++++   LT GV  L + C  +PG+P+ PMLA PTKG+ EI+ +F++    CE+KYDGER QIH  E+G + IYSRN E NT K+PD++  IS      V SF++D E+VA D     ILPFQ+LSTR RKN    +  V V +F FD+LY +G+PL+ + L+ R+E L  +F++  G F FAT++ +ND +EI  F + AV + CEGL+IKTLD +ATYE S+RS +WLK+KKDY++ +GDTLDLV + A+ G GKRTG YG +LL CY+   EE++S+CKIGTGF++ +L E+   L+ K I +  SYY+    +KPD  F    V+EVK AD+TISP H+AA G+ D  KGISLRFPR +R+R+DK  + A+SSEQV EMY  Q+
Sbjct:   13 WAKGSKVPYKEFALTLEKIEELSGKKKV-DELAQFFTKVLDFSPDDLTACVYMSVNQLGPSYEGLELGVAENSLIKAVAKATGRTEGKIKEDLRAKGDLGTVAQQSRSNQKMLAVPKALTVPTVFNKLTEIAKLSGTSAMNKKVDAISALLIACQGIEARFLVRMLAGKMRIGLGEQSVLSALGHAFTLSKITDQKVRGDKLDSLKDANVKRVKTAYCECPNYNRLIEVALTEGVEALVEKCKLSPGIPLKPMLAHPTKGIDEIMRRFRNQTMTCEWKYDGERGQIHKREDGQIFIYSRNQENNTTKYPDIIEKISSCIGDGVTSFIVDAEVVAIDEAGL-ILPFQVLSTRKRKNAT-DDNGVKVVVFLFDLLYFNGEPLVRKPLRKRRELLRTNFKKIDGSFYFATSVDTNDTDEINSFFDEAVQNKCEGLMIKTLDTEATYEISRRSHSWLKMKKDYVDGVGDTLDLVVMGAYSGVGKRTGVYGGYLLGCYNPTTEEYESVCKIGTGFTDEDLAEQYKILQDKKIDKSPSYYQFDHTLKPDDTFSPYLVFEVKCADITISPRHKAASGLTDDGKGISLRFPRFLRIRDDKNSDDATSSEQVLEMYKNQE 620          
BLAST of g.arboreum_cottongen_reftransV1_0020740 vs. ExPASy Swiss-Prot
Match: DNLI1_YEAST (DNA ligase 1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=CDC9 PE=1 SV=2)

HSP 1 Score: 528.865 bits (1361), Expect = 1.438e-171
Identity = 267/611 (43.70%), Postives = 404/611 (66.12%), Query Frame = 1
Query:  694 VPFLFLSLAFDLISNETGRIVITDIVCNMFRTVIATTPDDLVATVYLAANKVAPAHEGLELGIGDASI-IKALAEACGRTESQVKSQYKDKGDLGLVAQASRSSQSMMRKPDPLTVIKVFDTFQLIAKESGKDSQEKKKNRIKSLLVAATDCEPQYLIRLLQTKLRIGFSEQTLLAALGQAAVYNEQHSKPPPNVQSP---LEEAAKIVKQVFSILPVYDKIVPALLTGGVWDLPKSCGFTPGVPVGPMLAKPTKGVAEIINKFQDIDFICEYKYDGERAQIHYMENGSVEIYSRNAECNTGKFPDVVAAISRXXXXXXXXXXLDCELVAYDRVQKKILPFQILSTRARKNVVVSEIKVDVCIFAFDILYLDGQPLLHEQLKVRKERLYDSFEEEPGFFQFATALTSNDLEEIQIFLNSAVSSSCEGLIIKTLDR-DATYEPSKRSLNWLKLKKDYMESIGDTLDLVPIAAFHGRGKRTGFYGAFLLACYDENNEEFQSICKIGTGFXXXXXXXXXXXXXXKVIPEPKSYYRCSEMMKPDVWFETSEVWEVKAADLTISPVHRAAIGIVDPDKGISLRFPRLVRVREDKTPEQASSSEQVAEMYNAQKHNQ 2511
            +P+  +   F+ I   + R+ I  I  + F  ++  +  +L+ T YL  N++ P +E         ++ +K ++E CG++ SQ+K +YKD GDLG +A  +R+ Q  M KP PLTV +VF   + IAK  GKDSQ KK   IK +L A    E ++LIR L++KLRIG +E+T+L +L +A + ++++ +  P+   P   LE A + ++  F  +P Y+ ++ + L  G+ +L K C   PG+P+ PMLAKPTK + E++++FQ   F  EYKYDGERAQ+H + +G++ IYSRN E  T ++P++          + K+ +LDCE VA+D+ Q KILPFQ+LSTR RK+V ++++KV VC+FAFDIL  + + L+++ LK R+E L    +  PG FQ+AT +T+N+L+E+Q FL+ +V+ SCEGL++K L+  ++ YEPSKRS NWLKLKKDY+E +GD+LDL  + A++GRGKRTG YG FLL CY+++  EF++ CKIGTGFS+  L+     L   +I  PK+ +      +PDVWFE + ++EV  ADL++SP+++A  G    DKG+SLRFPR +R+REDK  E A+SS+Q+ E+Y  Q H Q
Sbjct:  146 IPYSEVCEVFNKIEAISSRLEIIRICSDFFIKIMKQSSKNLIPTTYLFINRLGPDYEAGLELGLGENLLMKTISETCGKSMSQIKLKYKDIGDLGEIAMGARNVQPTMFKPKPLTVGEVFKNLRAIAKTQGKDSQLKKMKLIKRMLTACKGIEAKFLIRSLESKLRIGLAEKTVLISLSKALLLHDENREDSPDKDVPMDVLESAQQKIRDAFCQVPNYEIVINSCLEHGIMNLDKYCTLRPGIPLKPMLAKPTKAINEVLDRFQGETFTSEYKYDGERAQVHLLNDGTMRIYSRNGENMTERYPEINITDFIQDLDTTKNLILDCEAVAWDKDQGKILPFQVLSTRKRKDVELNDVKVKVCLFAFDILCYNDERLINKSLKERREYLTKVTKVVPGEFQYATQITTNNLDELQKFLDESVNHSCEGLMVKMLEGPESHYEPSKRSRNWLKLKKDYLEGVGDSLDLCVLGAYYGRGKRTGTYGGFLLGCYNQDTGEFETCCKIGTGFSDEMLQLLHDRLTPTIIDGPKATFVFDSSAEPDVWFEPTTLFEVLTADLSLSPIYKA--GSATFDKGVSLRFPRFLRIREDKGVEDATSSDQIVELYENQSHMQ 754          
The following BLAST results are available for this feature:
BLAST of g.arboreum_cottongen_reftransV1_0020740 vs. ExPASy TrEMBL
Analysis Date: 2016-11-15 (Homology Analysis for Gossypium arboreum CottonGen RefTrans V1 vs TrEMBL)
Total hits: 25
Match NameE-valueIdentityDescription
M4DQ59_BRARP0.000e+071.00DNA ligase OS=Brassica rapa subsp. pekinensis GN=B... [more]
A0A087HLW6_ARAAL0.000e+071.54DNA ligase OS=Arabis alpina GN=AALP_AA1G082300 PE=... [more]
A0A078E250_BRANA0.000e+070.87DNA ligase OS=Brassica napus GN=BnaA06g04600D PE=3... [more]
A0A078EW74_BRANA0.000e+068.01DNA ligase OS=Brassica napus GN=BnaA09g49030D PE=3... [more]
M4ES34_BRARP0.000e+069.66DNA ligase OS=Brassica rapa subsp. pekinensis GN=B... [more]

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BLAST of g.arboreum_cottongen_reftransV1_0020740 vs. ExPASy Swiss-Prot
Analysis Date: 2016-11-15 (Homology Analysis for Gossypium arboreum CottonGen RefTrans V1 vs SwissProt)
Total hits: 25
Match NameE-valueIdentityDescription
DNLI1_ARATH0.000e+068.56DNA ligase 1 OS=Arabidopsis thaliana GN=LIG1 PE=2 ... [more]
DNLI1_XENLA0.000e+050.39DNA ligase 1 OS=Xenopus laevis GN=lig1 PE=2 SV=1[more]
DNLI1_DICDI0.000e+048.05DNA ligase 1 OS=Dictyostelium discoideum GN=lig1 P... [more]
DNLI1_HUMAN0.000e+049.13DNA ligase 1 OS=Homo sapiens GN=LIG1 PE=1 SV=1[more]
DNLI1_MOUSE0.000e+048.32DNA ligase 1 OS=Mus musculus GN=Lig1 PE=1 SV=2[more]
DNLI1_RAT0.000e+047.87DNA ligase 1 OS=Rattus norvegicus GN=Lig1 PE=2 SV=... [more]
DNLI1_DROME0.000e+044.00DNA ligase 1 OS=Drosophila melanogaster GN=DNA-lig... [more]
DNLI1_SCHPO0.000e+049.08DNA ligase 1 OS=Schizosaccharomyces pombe (strain ... [more]
DNLI1_CAEEL5.305e-17946.81DNA ligase 1 OS=Caenorhabditis elegans GN=lig-1 PE... [more]
DNLI1_YEAST1.438e-17143.70DNA ligase 1 OS=Saccharomyces cerevisiae (strain A... [more]

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InterPro
Analysis Name: InterProScan analysis for Gossypium arboreum CottonGen RefTrans V1
Date Performed: 2016-11-14
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR012308DNA ligase, ATP-dependent, N-terminalGENE3D1.10.3260.10coord: 166..429
e-value: 3.3E-95
score: 318.1
IPR012308DNA ligase, ATP-dependent, N-terminalPFAMPF04675DNA_ligase_A_Ncoord: 185..360
e-value: 2.1E-39
score: 135.5
IPR012308DNA ligase, ATP-dependent, N-terminalSUPERFAMILY117018ATP-dependent DNA ligase DNA-binding domaincoord: 168..417
IPR000977DNA ligase, ATP-dependentTIGRFAMTIGR00574TIGR00574coord: 243..782
e-value: 3.9E-153
score: 508.9
IPR012310DNA ligase, ATP-dependent, centralPFAMPF01068DNA_ligase_A_Mcoord: 427..631
e-value: 1.7E-62
score: 210.5
IPR012310DNA ligase, ATP-dependent, centralPROSITEPS50160DNA_LIGASE_A3coord: 533..669
score: 42.615
IPR012309DNA ligase, ATP-dependent, C-terminalPFAMPF04679DNA_ligase_A_Ccoord: 656..767
e-value: 2.1E-24
score: 85.8
NoneNo IPR availableGENE3D3.30.470.30coord: 457..580
e-value: 2.1E-39
score: 133.6
NoneNo IPR availableGENE3D3.30.1490.70coord: 430..456
e-value: 1.5E-29
score: 101.0
coord: 583..638
e-value: 1.5E-29
score: 101.0
NoneNo IPR availablePANTHERPTHR10459DNA LIGASEcoord: 176..795
NoneNo IPR availablePANTHERPTHR10459:SF10DNA LIGASE 1coord: 176..795
NoneNo IPR availableSUPERFAMILY56091DNA ligase/mRNA capping enzyme, catalytic domaincoord: 419..637
IPR012340Nucleic acid-binding, OB-foldGENE3D2.40.50.140coord: 640..785
e-value: 6.8E-58
score: 194.6
IPR012340Nucleic acid-binding, OB-foldSUPERFAMILY50249Nucleic acid-binding proteinscoord: 639..785
IPR016059DNA ligase, ATP-dependent, conserved sitePROSITEPS00697DNA_LIGASE_A1coord: 451..459
IPR016059DNA ligase, ATP-dependent, conserved sitePROSITEPS00333DNA_LIGASE_A2coord: 605..631

Sequences
The following sequences are available for this feature:

contig sequence

>g.arboreum_cottongen_reftransV1_0020740 ID=g.arboreum_cottongen_reftransV1_0020740; Name=g.arboreum_cottongen_reftransV1_0020740; organism=Gossypium arboreum; type=contig; length=3157bp
ATGGAGGGGGAATTCCATTTCCATATAAAAAGTTTGATCACACTTCCCGC
CATTTCTCTAAATCATCTTTCAAAGCTTTCCCAGCACTTTTCTCTATCCG
ATTCTATTGTGCGTGTGTGTTTTGTTTCATTTCATTCCAATTGAATGCTA
ACGTTTCGCCCATCCCATCTTCTCCGCTATACTTGTTGTATTACTCGTCC
TCTCACCCCTCTCCTTCCTCCCTTTTCCTCCCATATCCTTCCTTCCAACT
CGCCTTTCTTTCGCCCCAAACCCCTCTCTCTTTCTTCCTTAAACCCTCAC
TCCAACATGTCCACTCGCCCCTCCGCCTTCGATGCTTTAATGTCTAATGC
TCGCCGTTTAGCCGGTAAGAAGAGCTCTTCCTCTTCTTCGCCCACCAAGA
AACGCAAATCCCCCGATTCGTCGCCCACCCAAAACCCTAATCCCCCCAAA
ACCGTCGGCTCCACTGAAGTCAAGCACGACCCAGAGGTTTCTAGTGATGG
AATCGGAAAGCCCATTAACGATTCCCCAAAACCCGATTTAGATGAGGCGA
AGAAAACCCCGGATTCGAAGAAGGTGAAGGTGGGGAGCACCTCCGAGAGA
AACGCGGAGATGAAAGGGAAAATTGGTTTGTTGAAGAAGAAGCCGGCGGA
TTTTGATCCCAATATGGTGGCGTGTTGGGAGAAAGGAGAGAGGGTGCCGT
TTTTGTTTCTGAGCCTGGCGTTTGATTTGATATCCAATGAGACGGGTCGG
ATTGTGATAACGGATATTGTTTGCAATATGTTTAGGACTGTTATTGCTAC
CACGCCGGATGATTTGGTGGCGACGGTTTACTTGGCAGCAAATAAGGTTG
CTCCGGCGCACGAGGGGTTAGAGCTGGGAATCGGTGATGCATCCATTATC
AAGGCCCTAGCTGAGGCCTGTGGGAGGACTGAATCACAGGTTAAGAGTCA
GTACAAGGATAAAGGGGACCTGGGCCTTGTTGCACAGGCTAGCCGTTCAT
CTCAATCAATGATGCGCAAGCCTGATCCATTGACTGTTATCAAAGTGTTT
GACACGTTTCAGCTAATTGCTAAGGAATCTGGAAAGGATAGTCAGGAGAA
GAAAAAGAATCGTATCAAATCACTTCTTGTTGCTGCAACTGACTGTGAAC
CTCAGTATTTGATTCGTCTGCTTCAGACAAAGCTGCGGATTGGATTTTCA
GAGCAGACTCTGTTAGCTGCATTAGGACAGGCTGCTGTATATAATGAACA
ACATTCTAAACCACCTCCAAATGTTCAGTCTCCTTTAGAGGAGGCTGCTA
AGATTGTCAAACAAGTTTTTTCTATCCTTCCAGTCTATGATAAAATAGTC
CCAGCACTCTTGACTGGTGGTGTATGGGATCTGCCTAAGAGTTGTGGCTT
TACGCCGGGTGTTCCCGTTGGACCTATGCTAGCAAAACCAACCAAAGGTG
TTGCTGAAATCATAAATAAATTCCAGGACATTGACTTCATATGTGAATAT
AAATATGATGGAGAGCGTGCGCAGATACACTATATGGAGAATGGTTCAGT
TGAGATATACAGCCGAAATGCTGAGTGTAACACTGGAAAGTTTCCTGATG
TTGTTGCTGCAATTTCTAGATTTAAGAAGTCCTCTGTAAAATCATTTGTT
TTGGATTGTGAGCTTGTTGCTTATGATCGTGTTCAAAAGAAAATATTACC
CTTTCAGATCCTTAGTACAAGAGCACGGAAAAATGTGGTAGTGAGTGAAA
TAAAAGTTGATGTGTGCATATTCGCTTTTGACATCTTATACCTTGACGGG
CAACCACTTCTTCATGAGCAACTGAAAGTTCGTAAGGAGAGGCTTTATGA
TTCATTTGAGGAAGAACCTGGGTTTTTTCAATTTGCAACAGCCTTAACAT
CAAATGATCTTGAGGAGATTCAAATATTCCTTAATTCTGCTGTTTCTTCA
AGTTGTGAGGGTTTAATTATCAAAACATTGGATAGAGATGCTACATATGA
GCCATCGAAGCGGTCACTCAACTGGCTAAAATTGAAGAAAGACTACATGG
AAAGTATTGGCGACACATTAGATCTAGTACCTATTGCTGCTTTCCATGGC
CGTGGGAAACGAACTGGCTTCTATGGTGCTTTTCTCTTGGCATGTTATGA
TGAAAATAATGAAGAATTCCAGAGTATCTGTAAAATAGGTACTGGATTTT
CTGAAGCAGAGCTTGAGGAACGTTCTGCCAGTCTCCGCTCTAAAGTGATT
CCTGAACCAAAGTCATACTATCGTTGTTCTGAGATGATGAAGCCGGATGT
ATGGTTTGAGACTTCAGAGGTTTGGGAGGTAAAAGCTGCTGACTTGACCA
TTAGCCCTGTTCATCGTGCTGCTATTGGGATTGTGGATCCTGATAAGGGC
ATATCTCTCCGATTTCCACGTTTAGTTCGTGTTCGAGAAGATAAGACACC
AGAGCAAGCTTCATCATCTGAGCAGGTTGCTGAGATGTATAATGCTCAAA
AACACAATCAAACCAATAACGAAGATGATGGTGAGGATGATTGAGGAATT
CTGACAAGCGTCTCAACATTTTTCCTCCCCGAGTAGACCATAATTTCTAC
AAGTGGCGGGACCTAGAAGCCAAGTATCTCTAGTCATATCAGGGTGCCAC
TCATTGGAGGTGGGTTTGAGTCTTCAGTCAAGTAAACCATGCTAGCTTCT
TCATTTCCTAGCCACTGCTGTATGGACTGGACAATTCCATCAGGTTCTTT
TTCGATTTTCTGCCTAATTTTTTCAAGCAAAGTCTTGCATGAACTGCACT
TGGATGCTGCAATCTTTGTTTTTCAGTTAGAAATTTCCTTGAAATTTGAA
AAATCCATGGCTGCTCCTGTTTTTTTTACTGCTTGAATGCTACGATATTT
CCAGTTTCCTTGCGCCTAATCATGGCATAGCTTGGAAGAGCAAAGTTAGC
CCACAATTCGTTATCCATGTTTATACTTAAACCAGTTGGGGATGTCTCAG
AAAAATTTAGGATAAGTAAGAAAATGAAAATGTCATTATCTAGATGCTCT
CTACTTGCACAATGGGCTTGACCTATGTTTGAGGCCTTGCCGAATTTTGA
TGTAACGGGTAAAAGGGGGAGTAGGGTCATGGGAGTATGGATTTTGATAT
TTGCAGG
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Annotated Terms
The following terms have been associated with this contig:
Vocabulary: INTERPRO
TermDefinition
IPR012308DNA_ligase_ATP-dep_N
IPR000977DNA_ligase_ATP-dep
IPR012310DNA_ligase_ATP-dep_cent
IPR012309DNA_ligase_ATP-dep_C
IPR012340NA-bd_OB-fold
IPR016059DNA_ligase_ATP-dep_CS
Vocabulary: Molecular Function
TermDefinition
GO:0003910DNA ligase (ATP) activity
GO:0003677DNA binding
GO:0005524ATP binding
GO:0003909DNA ligase activity
Vocabulary: Biological Process
TermDefinition
GO:0006281DNA repair
GO:0006310DNA recombination
GO:0071897DNA biosynthetic process
GO:0051103DNA ligation involved in DNA repair