g.arboreum_cottongen_reftransV1_0021360, g.arboreum_cottongen_reftransV1_0021360 (contig) Gossypium arboreum
Overview
Alignments
The following features are aligned
Analyses
This contig is derived from or has results from the following analyses
Homology
BLAST of g.arboreum_cottongen_reftransV1_0021360 vs. ExPASy TrEMBL
Match: A0A0B0NFH0_GOSAR (Methyl-CpG-binding domain-containing protein 8 OS=Gossypium arboreum GN=F383_15700 PE=4 SV=1) HSP 1 Score: 1456.81 bits (3770), Expect = 0.000e+0 Identity = 715/715 (100.00%), Postives = 715/715 (100.00%), Query Frame = -3 Query: 634 VETFTDKYNHEGNLLSRDEQDKVNMNEKVLADRNCDTKIKFCFVTDNKGDITDATAAADLNVCLGSESILFTSDKEGISRPSDKVDVGFAVNSMEEKKREMALNTSFLAPNAKGNMFSDENTEDGHFPSFLKGMEVDLKDKATRDDPKAGCADTSTELSNVRIDNVQGNYSEGCSLIASGNKQRVNLVDHLKGASVTIDSTHERGSGCGLSSSKGDQTCVISNSLILVSGTLDDPESIMVNESANIEPTICFQSHLPMKKPSQEKSETVLLTSHGREQIFPSDNNAFKAFSRTVEVSDLDGAQNYRGLSPGVNSRNSGVDPNILASVKHEKTKDRLFGPSSYKKTHTCTPEYKQDKGSESILXXXXXXXXXXXYETSMNKVSFFSKEEPKHKGGSSIVGNAYARVGTFALTGTVQESCSPHFSGNREKISGKNNVPGISSGAVLEPKQNKGAFEDFFGLSSSEQTHVANNLNMVHAGTAHDGSRLQDFQNARNNEIMIGYTNHARPIEDSMTGLTWKSNEGNVLLSGLADTSSQLLTSSGYYPTFDWMSHKGETEMFDISGKCSSISGFEGLQSGSIEHMEYNFLTAQPSSCSGNPKGQSEMFNISGKCSNESGLSDNLEHMEYSFMTAQPSSRSGNSKVPSYGSEMALKFDSVWLGKDALPLLPKIAGRHQVTTLCSWCGNQFYNEAVDIAAQRSTMVMCANCRARFSRNHDFM 2778 VETFTDKYNHEGNLLSRDEQDKVNMNEKVLADRNCDTKIKFCFVTDNKGDITDATAAADLNVCLGSESILFTSDKEGISRPSDKVDVGFAVNSMEEKKREMALNTSFLAPNAKGNMFSDENTEDGHFPSFLKGMEVDLKDKATRDDPKAGCADTSTELSNVRIDNVQGNYSEGCSLIASGNKQRVNLVDHLKGASVTIDSTHERGSGCGLSSSKGDQTCVISNSLILVSGTLDDPESIMVNESANIEPTICFQSHLPMKKPSQEKSETVLLTSHGREQIFPSDNNAFKAFSRTVEVSDLDGAQNYRGLSPGVNSRNSGVDPNILASVKHEKTKDRLFGPSSYKKTHTCTPEYKQDKGSESILYQQYGNQQNSNYETSMNKVSFFSKEEPKHKGGSSIVGNAYARVGTFALTGTVQESCSPHFSGNREKISGKNNVPGISSGAVLEPKQNKGAFEDFFGLSSSEQTHVANNLNMVHAGTAHDGSRLQDFQNARNNEIMIGYTNHARPIEDSMTGLTWKSNEGNVLLSGLADTSSQLLTSSGYYPTFDWMSHKGETEMFDISGKCSSISGFEGLQSGSIEHMEYNFLTAQPSSCSGNPKGQSEMFNISGKCSNESGLSDNLEHMEYSFMTAQPSSRSGNSKVPSYGSEMALKFDSVWLGKDALPLLPKIAGRHQVTTLCSWCGNQFYNEAVDIAAQRSTMVMCANCRARFSRNHDFM Sbjct: 525 VETFTDKYNHEGNLLSRDEQDKVNMNEKVLADRNCDTKIKFCFVTDNKGDITDATAAADLNVCLGSESILFTSDKEGISRPSDKVDVGFAVNSMEEKKREMALNTSFLAPNAKGNMFSDENTEDGHFPSFLKGMEVDLKDKATRDDPKAGCADTSTELSNVRIDNVQGNYSEGCSLIASGNKQRVNLVDHLKGASVTIDSTHERGSGCGLSSSKGDQTCVISNSLILVSGTLDDPESIMVNESANIEPTICFQSHLPMKKPSQEKSETVLLTSHGREQIFPSDNNAFKAFSRTVEVSDLDGAQNYRGLSPGVNSRNSGVDPNILASVKHEKTKDRLFGPSSYKKTHTCTPEYKQDKGSESILYQQYGNQQNSNYETSMNKVSFFSKEEPKHKGGSSIVGNAYARVGTFALTGTVQESCSPHFSGNREKISGKNNVPGISSGAVLEPKQNKGAFEDFFGLSSSEQTHVANNLNMVHAGTAHDGSRLQDFQNARNNEIMIGYTNHARPIEDSMTGLTWKSNEGNVLLSGLADTSSQLLTSSGYYPTFDWMSHKGETEMFDISGKCSSISGFEGLQSGSIEHMEYNFLTAQPSSCSGNPKGQSEMFNISGKCSNESGLSDNLEHMEYSFMTAQPSSRSGNSKVPSYGSEMALKFDSVWLGKDALPLLPKIAGRHQVTTLCSWCGNQFYNEAVDIAAQRSTMVMCANCRARFSRNHDFM 1239
BLAST of g.arboreum_cottongen_reftransV1_0021360 vs. ExPASy TrEMBL
Match: A0A0B0NKI0_GOSAR (Methyl-CpG-binding domain-containing protein 8 OS=Gossypium arboreum GN=F383_15700 PE=4 SV=1) HSP 1 Score: 1438.71 bits (3723), Expect = 0.000e+0 Identity = 707/707 (100.00%), Postives = 707/707 (100.00%), Query Frame = -3 Query: 658 VETFTDKYNHEGNLLSRDEQDKVNMNEKVLADRNCDTKIKFCFVTDNKGDITDATAAADLNVCLGSESILFTSDKEGISRPSDKVDVGFAVNSMEEKKREMALNTSFLAPNAKGNMFSDENTEDGHFPSFLKGMEVDLKDKATRDDPKAGCADTSTELSNVRIDNVQGNYSEGCSLIASGNKQRVNLVDHLKGASVTIDSTHERGSGCGLSSSKGDQTCVISNSLILVSGTLDDPESIMVNESANIEPTICFQSHLPMKKPSQEKSETVLLTSHGREQIFPSDNNAFKAFSRTVEVSDLDGAQNYRGLSPGVNSRNSGVDPNILASVKHEKTKDRLFGPSSYKKTHTCTPEYKQDKGSESILXXXXXXXXXXXYETSMNKVSFFSKEEPKHKGGSSIVGNAYARVGTFALTGTVQESCSPHFSGNREKISGKNNVPGISSGAVLEPKQNKGAFEDFFGLSSSEQTHVANNLNMVHAGTAHDGSRLQDFQNARNNEIMIGYTNHARPIEDSMTGLTWKSNEGNVLLSGLADTSSQLLTSSGYYPTFDWMSHKGETEMFDISGKCSSISGFEGLQSGSIEHMEYNFLTAQPSSCSGNPKGQSEMFNISGKCSNESGLSDNLEHMEYSFMTAQPSSRSGNSKVPSYGSEMALKFDSVWLGKDALPLLPKIAGRHQVTTLCSWCGNQFYNEAVDIAAQRSTMVMCANCRAR 2778 VETFTDKYNHEGNLLSRDEQDKVNMNEKVLADRNCDTKIKFCFVTDNKGDITDATAAADLNVCLGSESILFTSDKEGISRPSDKVDVGFAVNSMEEKKREMALNTSFLAPNAKGNMFSDENTEDGHFPSFLKGMEVDLKDKATRDDPKAGCADTSTELSNVRIDNVQGNYSEGCSLIASGNKQRVNLVDHLKGASVTIDSTHERGSGCGLSSSKGDQTCVISNSLILVSGTLDDPESIMVNESANIEPTICFQSHLPMKKPSQEKSETVLLTSHGREQIFPSDNNAFKAFSRTVEVSDLDGAQNYRGLSPGVNSRNSGVDPNILASVKHEKTKDRLFGPSSYKKTHTCTPEYKQDKGSESILYQQYGNQQNSNYETSMNKVSFFSKEEPKHKGGSSIVGNAYARVGTFALTGTVQESCSPHFSGNREKISGKNNVPGISSGAVLEPKQNKGAFEDFFGLSSSEQTHVANNLNMVHAGTAHDGSRLQDFQNARNNEIMIGYTNHARPIEDSMTGLTWKSNEGNVLLSGLADTSSQLLTSSGYYPTFDWMSHKGETEMFDISGKCSSISGFEGLQSGSIEHMEYNFLTAQPSSCSGNPKGQSEMFNISGKCSNESGLSDNLEHMEYSFMTAQPSSRSGNSKVPSYGSEMALKFDSVWLGKDALPLLPKIAGRHQVTTLCSWCGNQFYNEAVDIAAQRSTMVMCANCRAR Sbjct: 525 VETFTDKYNHEGNLLSRDEQDKVNMNEKVLADRNCDTKIKFCFVTDNKGDITDATAAADLNVCLGSESILFTSDKEGISRPSDKVDVGFAVNSMEEKKREMALNTSFLAPNAKGNMFSDENTEDGHFPSFLKGMEVDLKDKATRDDPKAGCADTSTELSNVRIDNVQGNYSEGCSLIASGNKQRVNLVDHLKGASVTIDSTHERGSGCGLSSSKGDQTCVISNSLILVSGTLDDPESIMVNESANIEPTICFQSHLPMKKPSQEKSETVLLTSHGREQIFPSDNNAFKAFSRTVEVSDLDGAQNYRGLSPGVNSRNSGVDPNILASVKHEKTKDRLFGPSSYKKTHTCTPEYKQDKGSESILYQQYGNQQNSNYETSMNKVSFFSKEEPKHKGGSSIVGNAYARVGTFALTGTVQESCSPHFSGNREKISGKNNVPGISSGAVLEPKQNKGAFEDFFGLSSSEQTHVANNLNMVHAGTAHDGSRLQDFQNARNNEIMIGYTNHARPIEDSMTGLTWKSNEGNVLLSGLADTSSQLLTSSGYYPTFDWMSHKGETEMFDISGKCSSISGFEGLQSGSIEHMEYNFLTAQPSSCSGNPKGQSEMFNISGKCSNESGLSDNLEHMEYSFMTAQPSSRSGNSKVPSYGSEMALKFDSVWLGKDALPLLPKIAGRHQVTTLCSWCGNQFYNEAVDIAAQRSTMVMCANCRAR 1231
BLAST of g.arboreum_cottongen_reftransV1_0021360 vs. ExPASy TrEMBL
Match: A0A0D2Q638_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_002G140700 PE=4 SV=1) HSP 1 Score: 1408.28 bits (3644), Expect = 0.000e+0 Identity = 690/715 (96.50%), Postives = 703/715 (98.32%), Query Frame = -3 Query: 634 VETFTDKYNHEGNLLSRDEQDKVNMNEKVLADRNCDTKIKFCFVTDNKGDITDATAAADLNVCLGSESILFTSDKEGISRPSDKVDVGFAVNSMEEKKREMALNTSFLAPNAKGNMFSDENTEDGHFPSFLKGMEVDLKDKATRDDPKAGCADTSTELSNVRIDNVQGNYSEGCSLIASGNKQRVNLVDHLKGASVTIDSTHERGSGCGLSSSKGDQTCVISNSLILVSGTLDDPESIMVNESANIEPTICFQSHLPMKKPSQEKSETVLLTSHGREQIFPSDNNAFKAFSRTVEVSDLDGAQNYRGLSPGVNSRNSGVDPNILASVKHEKTKDRLFGPSSYKKTHTCTPEYKQDKGSESILXXXXXXXXXXXYETSMNKVSFFSKEEPKHKGGSSIVGNAYARVGTFALTGTVQESCSPHFSGNREKISGKNNVPGISSGAVLEPKQNKGAFEDFFGLSSSEQTHVANNLNMVHAGTAHDGSRLQDFQNARNNEIMIGYTNHARPIEDSMTGLTWKSNEGNVLLSGLADTSSQLLTSSGYYPTFDWMSHKGETEMFDISGKCSSISGFEGLQSGSIEHMEYNFLTAQPSSCSGNPKGQSEMFNISGKCSNESGLSDNLEHMEYSFMTAQPSSRSGNSKVPSYGSEMALKFDSVWLGKDALPLLPKIAGRHQVTTLCSWCGNQFYNEAVDIAAQRSTMVMCANCRARFSRNHDFM 2778 VETFTDKYNHEG+LLS DEQDKVNM+EKVLADRNCDTK KFCFVTDNKGDITDATAAADLNVCLGSE+ILFTSDKEGISR SDK+DVGFAVNS+EEKKREMA NTSFLAPNAKGNMFSDENTEDGHFPSFLKGMEVDLKDKATRDDPKAGCADTSTELSNVRID VQGNY+EGCSLI SGNKQRVNLVDHLKGASVT DSTHERGSGCGLS SKGDQTCVI+NSLILVSGTLDDPESIMVNESANI+PTICFQSHLPMKKPSQEKSETVLLTSHGREQIFPSDNNAFKAFSRTVEVS+LDGAQNYRGLSPGVNSRNSGVDPNILASVKHEKTKDRLFGP+SYKKTHTCTPEYKQDKGSESILYQQYGNQQNSNYETSMNKVSFF+KEEPKHKGGSSIVGNAYARVG FALTGTVQESCSPHFSGNREKIS KNNVPGISSG VLEPKQNKGAFEDFFGLSSSEQTHVANNLNMVHAGTAHDGSRLQDFQNARNNEIMIGY+NHARPIEDSMTGLTWKSNEGNVLLSGLADTSSQLLTSSGYYPTFDWMSHKGETEMFDISGKCSSI+GFEGLQSGSIEHMEYNFLTAQPSSCSGN KGQSEMFNISGKCSNESGLSDNLEHMEYSFMTAQPSSRSGNSKVPSYGSEMALKFDSVWLGKDALPLLPKIAGRHQVTTLCSWCGNQFYNEAVDIAAQRSTMVMCANCRARFSRNHDFM Sbjct: 568 VETFTDKYNHEGSLLSHDEQDKVNMSEKVLADRNCDTKSKFCFVTDNKGDITDATAAADLNVCLGSENILFTSDKEGISRSSDKIDVGFAVNSVEEKKREMASNTSFLAPNAKGNMFSDENTEDGHFPSFLKGMEVDLKDKATRDDPKAGCADTSTELSNVRIDTVQGNYNEGCSLIPSGNKQRVNLVDHLKGASVTTDSTHERGSGCGLSLSKGDQTCVINNSLILVSGTLDDPESIMVNESANIDPTICFQSHLPMKKPSQEKSETVLLTSHGREQIFPSDNNAFKAFSRTVEVSELDGAQNYRGLSPGVNSRNSGVDPNILASVKHEKTKDRLFGPASYKKTHTCTPEYKQDKGSESILYQQYGNQQNSNYETSMNKVSFFTKEEPKHKGGSSIVGNAYARVGAFALTGTVQESCSPHFSGNREKISVKNNVPGISSGVVLEPKQNKGAFEDFFGLSSSEQTHVANNLNMVHAGTAHDGSRLQDFQNARNNEIMIGYSNHARPIEDSMTGLTWKSNEGNVLLSGLADTSSQLLTSSGYYPTFDWMSHKGETEMFDISGKCSSIAGFEGLQSGSIEHMEYNFLTAQPSSCSGNSKGQSEMFNISGKCSNESGLSDNLEHMEYSFMTAQPSSRSGNSKVPSYGSEMALKFDSVWLGKDALPLLPKIAGRHQVTTLCSWCGNQFYNEAVDIAAQRSTMVMCANCRARFSRNHDFM 1282
BLAST of g.arboreum_cottongen_reftransV1_0021360 vs. ExPASy TrEMBL
Match: A0A061FFY5_THECC (Uncharacterized protein isoform 1 OS=Theobroma cacao GN=TCM_034889 PE=4 SV=1) HSP 1 Score: 858.21 bits (2216), Expect = 0.000e+0 Identity = 463/719 (64.39%), Postives = 538/719 (74.83%), Query Frame = -3 Query: 634 VETFTDKYNHEGNLLSRDEQDKVNMNEKVLADRNCDTKIKFCFVTDNKGDITDATAAADLNVCLGSESILFTSDKEGISRPSDKVDVGFAVNSMEEKKREMALNTSFLAPNAKGNMFSDENTEDGHFPSFLKGMEVDLKDKATRDDPKAGCADTSTELSNVRIDNVQGNYSEGCSLIASGNKQRVNLVDHLKGASVTIDSTHERGSGCGLSSSKGDQTCVISNSLILV-SGTLDDPESIMVNESANIEPTICFQSHLPMKKPSQEKSETVLLTSHGREQIFPSDNNAFKAFSRTVEVSDLDGAQNYRGLSPGVNSRNSGVDPNILASVKHEKTKDRLFGPSSYKKTHTCT-PEYKQDKGSESILXXXXXXXXXXXYETSMNKVSFFSKEEPKHKGGSSIVGNAYARVGTFALTGTVQESCSPHFSGNREKISGKNNVPGISSGAVLEPKQNKGAFEDFFGLSSSEQTHVANNLNMVHAGTAHDGSRLQDFQNARNNEIMIGYTNHARPIEDSMTGLTWKSNEGNVLLSGLADTSSQLLTSSGYYPTFDWMSHKGETEMFDISGKCSSISGFEGLQSGSIEHMEYNFLTAQPSSCSGNPKGQSEMFNISGKCSNESGLSDNLEHMEYSFMTAQPSSRSGNSKVPSYGSEMALKFD-SVWLGKDALPLLPKIAGRHQVTTLCSWCGNQFYNEAVDIAAQRSTM-VMCANCRARFSRNHDFM 2778 VET+TDK+++E N L R EK LAD+ CD + KFC +T+NKG++TD TAA +LNVCLGSE + FT++ G+S+ SDKVDV A++SMEEKKREMA N S LAPNA+GNMFSDEN E HF SFLKGME D ++K DDPKA CA+T T +V ID Q N SE C L S N+QR NLVD++KGASVTIDS E GSGCGL+SSK D++CVI+N+L L +GTLDDPESI+V+ES N + TI FQ++ +KKPSQ+ SE+ LLT HGREQIFPSDNNAFK SR VEVS+ D Q GL S +SG+D NILASV+ KT+D LFGPSSYKKT T T E KQ KGSES L++Q NQQNS+ ETSMNKVSF + EEPKHK SS++GNA+AR+G FALTGT QES SP S N EK +GKNNVP I SG EPKQNKGAFED F LS SEQT VANNL+M+HAGTAHD SRLQDF+NARNNEIMIG+ NHAR E SMTGLTWKS+EG+VLLSGLADTSSQLL SSGYY TFD MSHKGE EMF++SGKCS++SGFEGL+S SIEHMEYN LTAQ SS RSG+SKVPSY SEMAL FD S+WLGK+ALPLLPK+ GRHQVTTLCSWCGN+FY+EAVDI AQR++M VMCA+CRARFSRN DF+ Sbjct: 539 VETYTDKHSYECNFLFR---------EKTLADKTCDKQNKFCIITNNKGEVTD-TAAVELNVCLGSEKVFFTAESSGMSQSSDKVDVRLALHSMEEKKREMASNFSLLAPNAEGNMFSDENLEYRHFASFLKGMEPDCEEKVVGDDPKANCANTCTGPDSVTIDAEQQNCSESCLLTLSSNEQRGNLVDYVKGASVTIDSAREVGSGCGLTSSKDDKSCVINNNLFLAFTGTLDDPESIVVSESGNNDSTIGFQTNHRVKKPSQD-SESALLTLHGREQIFPSDNNAFKVSSRRVEVSEFDEIQKSSGLIQA-GSHDSGLDMNILASVRQAKTRDFLFGPSSYKKTFTSTVEECKQVKGSESSLHEQSANQQNSSKETSMNKVSFITIEEPKHKVESSLIGNAHARLGAFALTGTGQESSSPLSSENWEKFAGKNNVPCIGSGTFHEPKQNKGAFEDLFCLSGSEQTQVANNLSMIHAGTAHDRSRLQDFENARNNEIMIGFGNHARRTESSMTGLTWKSDEGSVLLSGLADTSSQLLQSSGYYSTFDVMSHKGEGEMFNVSGKCSNVSGFEGLRSDSIEHMEYNILTAQTSS------------------------------------------RSGDSKVPSYDSEMALTFDSSIWLGKEALPLLPKVDGRHQVTTLCSWCGNEFYHEAVDIEAQRNSMAVMCASCRARFSRNRDFL 1203
BLAST of g.arboreum_cottongen_reftransV1_0021360 vs. ExPASy TrEMBL
Match: A0A067LA57_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_15797 PE=4 SV=1) HSP 1 Score: 201.445 bits (511), Expect = 9.239e-50 Identity = 217/784 (27.68%), Postives = 353/784 (45.03%), Query Frame = -3 Query: 634 CDTKIKFCFVTDNKGD-ITDA--TAAADLNVCLGSESILFTSDKEGISRPSDKV--------------------------DVGFAVNSMEEK---------KREMALNTSFLAPNAKGNMFSDENTEDGHFPSFLKGMEVDLKDKATRDDPKAGCADTSTELSNVRIDNVQGNYSEGCSLIASGNKQRVNLVD--HLKGASVTIDSTHERGSGCGLSSSKGDQTCVISNSLILV-SGTLDDPE---SIMVNESANIEPTICFQSH--LPMKKPSQEKSETVLLTSHG-----REQIFPSDNNA------------------------FKAFSRTVEVSDLDGAQNYRGLSPGVNSRNSGVDPNILA----SVKHEKTKDRLFGPSSYKKTHT---------CTPEYKQDKGSESILXXXXXXXXXXXYETSMNKVSFFSKEEPKHK--------GGSSIVGNAYARVGTFALTGTVQESCSPH----FSGNREKISGKNNVPGISSGAVLEPKQNKGAFEDFFGLSSSEQT-HVANNLNMVHAGTAHDGSRLQDFQNARNNEIMIGYTNHARPIEDSMTGLTWKSNEGNVLLSGLADTSSQLLTSSGYYPTFDWMSHKGETEMFDISGKCSSISGFEGLQSGSIEHMEYNFLTAQPSSCSGNPKGQSEMFNISGKCSNESGLSDNLEHMEYSFMTAQPSSRSGNSKVPSYGSEMALKFD-SVWLGKDALPLLPKIAGRHQVTTLCSWCGNQFYNEAVDIAAQRSTM-VMCANCRARFSRNHDFM 2676 CD + F + ++K D +T+ A ++NV G+ES ++ + I +PS + D FAV++ E++ +E ++ L+ N+ + T+D S + GM++D K ++ + G ++ +V + + EG +I S Q+ VD HL S +++TH+RGS GL SS G++TCV ++ + V + T++ + S+M SA IC +S+ L M+ P + SH +EQ+ NNA F + + T++VS+ A + P + D +++A + E+T + L SS + T + QD+ SES L++ + + E SMNKVS+ ++ KHK G + N++ + T QESCS SGN++K ++N+ G+ + + E K ++ LS SEQ V NN + G + S L D+ N R E ++G++ +A+ E++++G W+++E N LS ADTSSQL+ SS Y+PT+D MS KGE+E+F K + +GF+G++S +E+MEYNF+T S S SKV SY +E+ D SVWL K+ALPLLPKIA + LC WC N+F+ EA++ AQ +M CA C+A+FS + M Sbjct: 601 CDKQDMFYSMNNDKEDKVTEVNDVIAVEINVFPGAESASLYNENDSIPKPSGETNFFQCATDTINTFGAQEEGSLPAVGRDRTFAVDNNEDQVCTSLKEDHSQERGSDSCSLSLNSVEKEV--DGTKDISVSSTINGMKIDEKVFLGKEKLRTGFSNDCLAKEDVANNIKEQRSCEGSLVIPSRIDQKNGPVDNAHLLSNSTVVENTHDRGSKGGLLSSLGEKTCVSNDKVNQVFTSTVNKSKFDKSVMSRNSAQ---KICLESNNMLAMEDPGILSELENISGSHSVVPSWKEQMCSFGNNASGTSICTRKKHCQENESEVIQLNLFGSENITMKVSNATMAVPNQNKVPLSKNSECCEDVDVVAGHATDIDLERTCNNLPVRSSNELTFASKDGGVLNGTSKNLMQDRISESSLHEPSCDGHAHDNENSMNKVSYIIMDQHKHKQFKSSCDVGPNIAFDNSHTEQHVDVVKSTTQESCSKDSSLVISGNQQKFDVEDNLTGLYTSTLNE---QKSPAKNLLSLSKSEQVWSVENNSSRDLTGRVQEESAL-DYLNPREKESLMGFSTYAQN-ENALSGFMWRTDEQNDPLSSFADTSSQLVHSSSYFPTYDVMSDKGESELF--GEKFNGTTGFDGVRSSGMENMEYNFMT----------------------------------------------SHSVGSKVFSYNAEITQGLDSSVWLEKEALPLLPKIASKRHTPALCVWCRNEFHYEALESEAQIGSMGFTCATCKAKFSGQFNLM 1326
BLAST of g.arboreum_cottongen_reftransV1_0021360 vs. ExPASy TrEMBL
Match: A0A067H079_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g002466mg PE=4 SV=1) HSP 1 Score: 176.407 bits (446), Expect = 1.213e-43 Identity = 116/290 (40.00%), Postives = 156/290 (53.79%), Query Frame = -3 Query: 640 EKISG-KNNVPGISSGAVLEPKQNKGAFEDFFGLSSSEQTHVANNLNMVHAGTAHDGSRLQDFQNARNNEIMIGYTNHARPIEDSMTGLTWKSNEGNVLLSGLADTSSQLLTSSGYYPTFDWMSHKGETEMFDISGKCSSISGFEGLQSGSIEHMEYNFLTAQPSSCSGNPKGQSEMFNISGKCSNESGLSDNLEHMEYSFMTAQPSSRSGNSKVPSYGSEMALKFDS-VWLGKDALPLLPKIAGRHQVTTLCSWCGNQFYNEAVDIAAQRSTM-VMCANCRARFSRNHD 1500 EKI G NN+ +S + PK F++ +SSE N V T GSRL+D NARNNE+M +NH R D +T L W+++E N+LLS L DTSS+LL SS F MS KG +E+FD K SISGFEG++ G+ E H+EY+F+T QP S SKV SY +EM+ FDS VWL K+ALPLLPKI RH+VTT+C+WC N+F++E +D + ++ MC C+A+FS +H+ Sbjct: 262 EKIFGFDNNLTKVSVDKMEVPK-----FDEV--RNSSEHADGLKNNYRVDTCTVQ-GSRLEDSDNARNNELMSDISNHNRSGVDFVTQLLWRTDEENILLSSLTDTSSRLLQSSA----FGTMSDKGVSELFD--EKYDSISGFEGMRMGTTE------------------------------------------HLEYNFLTTQPGRHSEVSKVLSYDAEMSQGFDSSVWLEKEALPLLPKIGSRHRVTTVCAWCRNEFHHEPIDTGGETGSVGFMCPTCKAKFSGSHN 495
BLAST of g.arboreum_cottongen_reftransV1_0021360 vs. ExPASy TrEMBL
Match: A0A067GZT2_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g002466mg PE=4 SV=1) HSP 1 Score: 176.022 bits (445), Expect = 2.298e-43 Identity = 116/290 (40.00%), Postives = 156/290 (53.79%), Query Frame = -3 Query: 640 EKISG-KNNVPGISSGAVLEPKQNKGAFEDFFGLSSSEQTHVANNLNMVHAGTAHDGSRLQDFQNARNNEIMIGYTNHARPIEDSMTGLTWKSNEGNVLLSGLADTSSQLLTSSGYYPTFDWMSHKGETEMFDISGKCSSISGFEGLQSGSIEHMEYNFLTAQPSSCSGNPKGQSEMFNISGKCSNESGLSDNLEHMEYSFMTAQPSSRSGNSKVPSYGSEMALKFDS-VWLGKDALPLLPKIAGRHQVTTLCSWCGNQFYNEAVDIAAQRSTM-VMCANCRARFSRNHD 1500 EKI G NN+ +S + PK F++ +SSE N V T GSRL+D NARNNE+M +NH R D +T L W+++E N+LLS L DTSS+LL SS F MS KG +E+FD K SISGFEG++ G+ E H+EY+F+T QP S SKV SY +EM+ FDS VWL K+ALPLLPKI RH+VTT+C+WC N+F++E +D + ++ MC C+A+FS +H+ Sbjct: 290 EKIFGFDNNLTKVSVDKMEVPK-----FDEV--RNSSEHADGLKNNYRVDTCTVQ-GSRLEDSDNARNNELMSDISNHNRSGVDFVTQLLWRTDEENILLSSLTDTSSRLLQSSA----FGTMSDKGVSELFD--EKYDSISGFEGMRMGTTE------------------------------------------HLEYNFLTTQPGRHSEVSKVLSYDAEMSQGFDSSVWLEKEALPLLPKIGSRHRVTTVCAWCRNEFHHEPIDTGGETGSVGFMCPTCKAKFSGSHN 523
BLAST of g.arboreum_cottongen_reftransV1_0021360 vs. ExPASy TrEMBL
Match: B9H725_POPTR (DNA-binding family protein OS=Populus trichocarpa GN=POPTR_0005s17160g PE=4 SV=2) HSP 1 Score: 179.489 bits (454), Expect = 8.661e-43 Identity = 205/752 (27.26%), Postives = 313/752 (41.62%), Query Frame = -3 Query: 652 DNKGDITDAT--AAADLNVCLGSESILFTSDKEGISRPSDKVDV-GFAVNSM---------------------------EEKKREMALNTSFLAPNAKGNMFSDENTEDGHFPSFLKGMEVDLKDKATRDDPKAG-CADTSTELSNVRIDNVQGNYSEGCSLIASGNKQRVNLVDHLKGASVTIDSTHERGSGCGLSSSKGDQTCVISNSLILVSGTLDDP--------------------------ESIMVNESANIE---PTICF---QSHLP-----------MKKPSQEK-SETVLLTSHGREQIFPSDNNAFKAFSRTVEVSDLDGAQNYRGLSPGVNSRNSGVDPNI--LASVKHEKTKDRLFGPSSYKKTHTCTPEYKQDKGSESILXXXXXXXXXXXYETSMNKVSFFSKEEPK-HKGGSSIVGNAYARVG-------TFALTGTVQESCSPHFSGNREKISGKNNVPGISSGAVLEPKQNKGAFEDFFGLS-SSEQTHVANNLNMVHAGTAHDGSRLQDFQNARNNEIMIGYTNHARPIEDSMTGLTWKSNEGNVLLSGLADTSSQLLTSSGYYPTFDWMSHKGETEMFDISGKCSSISGFEGLQSGSIEHMEYNFLTAQPSSCSGNPKGQSEMFNISGKCSNESGLSDNLEHMEYSFMTAQPSSRSGNSKVPSYGSEMALKFD-SVWLGKDALPLLPKIAGRHQVTTLCSWCGNQFYNEAVDIAAQRSTM-VMCANCRARFS 2643 D G++ + T AA+++VC SE L +++ I R SD+ +V + N + EE + ++ LAPNAK NMF+D+ ED + S + M +D D + +P G CA + NV + + SEGCS V L++ S+ ++ E+ SSKGD T + +N + +G L++ +++++NE P I F Q HL +++P QE+ SE LLT G EQ F N K T+ V + + + N S +D ++ + +++ + F PS+ T E D E SMN++S + E K + +S G G +TGTVQE C F+GN+ ++ K+N G +G + E KQ + E LS + V NL+ G+ + R+++ +N++ +++ ++ H P E + W++ E L ADT Q + +SG++P +D +S KGE+E F ISGFEGL+SG +E+MEYN LT +Q SS S SKV S + + FD SV L K LP LPK A RH V +C WCG + EA + AQ STM MCA C ARFS Sbjct: 590 DEVGEMNEVTDIVAAEISVC--SEPALLSNENNAIHRSSDETNVPKYCTNIIDDLDCSVAGDVRNLACINLNRVPPRLIEELNQGRGSDSGLLAPNAKENMFNDDIIEDRNCSSTIDNMVIDDWDADGKGEPITGSCAAIA---ENVAANLKEQRSSEGCS---------VGLLN-----SIAVEIMQEK-------SSKGDLTGIENNMNSVCTGMLNESKFDDVGKPGTNELTSVCRDNNTALVDDNVVINEQGKNHGGCPVIPFLNEQMHLAENNITGTPKCTIREPCQEEESEGGLLTISGNEQSFDLKGNVIKVSKGTINVVNHNEVLCLKN-----NEFGSEIDQSVQTVTNIQERSSNIFSFFPSTNGLTFASKDEQSHDD------------------ENSMNQLSCTTSAEDKLQEAKTSCNGELCIAFGDNCTEQDADIVTGTVQEICFL-FAGNQHTLTAKDNATGPFNGTMDELKQKMDSVESVLCLSGDAPMRSVEKNLHTAFTGSIQEEPRVKNTENSKKDDLGHDFSGHPGPNESVESEFVWRNEENGGLRCDFADTC-QPVQASGFFPLYDAVSDKGESEHF--GEAYGVISGFEGLKSGGMENMEYNLLT------------------------------------------SQVSSHSDESKVVSCDAVIPQGFDSSVCLEKGDLPFLPKNASRHHVPAVCVWCGREICQEAFESEAQTSTMGFMCAECAARFS 1246
BLAST of g.arboreum_cottongen_reftransV1_0021360 vs. ExPASy TrEMBL
Match: A0A067GMM3_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g002466mg PE=4 SV=1) HSP 1 Score: 176.407 bits (446), Expect = 5.110e-42 Identity = 116/290 (40.00%), Postives = 156/290 (53.79%), Query Frame = -3 Query: 640 EKISG-KNNVPGISSGAVLEPKQNKGAFEDFFGLSSSEQTHVANNLNMVHAGTAHDGSRLQDFQNARNNEIMIGYTNHARPIEDSMTGLTWKSNEGNVLLSGLADTSSQLLTSSGYYPTFDWMSHKGETEMFDISGKCSSISGFEGLQSGSIEHMEYNFLTAQPSSCSGNPKGQSEMFNISGKCSNESGLSDNLEHMEYSFMTAQPSSRSGNSKVPSYGSEMALKFDS-VWLGKDALPLLPKIAGRHQVTTLCSWCGNQFYNEAVDIAAQRSTM-VMCANCRARFSRNHD 1500 EKI G NN+ +S + PK F++ +SSE N V T GSRL+D NARNNE+M +NH R D +T L W+++E N+LLS L DTSS+LL SS F MS KG +E+FD K SISGFEG++ G+ E H+EY+F+T QP S SKV SY +EM+ FDS VWL K+ALPLLPKI RH+VTT+C+WC N+F++E +D + ++ MC C+A+FS +H+ Sbjct: 684 EKIFGFDNNLTKVSVDKMEVPK-----FDEV--RNSSEHADGLKNNYRVDTCTVQ-GSRLEDSDNARNNELMSDISNHNRSGVDFVTQLLWRTDEENILLSSLTDTSSRLLQSSA----FGTMSDKGVSELFD--EKYDSISGFEGMRMGTTE------------------------------------------HLEYNFLTTQPGRHSEVSKVLSYDAEMSQGFDSSVWLEKEALPLLPKIGSRHRVTTVCAWCRNEFHHEPIDTGGETGSVGFMCPTCKAKFSGSHN 917
BLAST of g.arboreum_cottongen_reftransV1_0021360 vs. ExPASy TrEMBL
Match: V4TC46_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10000205mg PE=4 SV=1) HSP 1 Score: 176.022 bits (445), Expect = 5.736e-42 Identity = 116/290 (40.00%), Postives = 156/290 (53.79%), Query Frame = -3 Query: 640 EKISG-KNNVPGISSGAVLEPKQNKGAFEDFFGLSSSEQTHVANNLNMVHAGTAHDGSRLQDFQNARNNEIMIGYTNHARPIEDSMTGLTWKSNEGNVLLSGLADTSSQLLTSSGYYPTFDWMSHKGETEMFDISGKCSSISGFEGLQSGSIEHMEYNFLTAQPSSCSGNPKGQSEMFNISGKCSNESGLSDNLEHMEYSFMTAQPSSRSGNSKVPSYGSEMALKFDS-VWLGKDALPLLPKIAGRHQVTTLCSWCGNQFYNEAVDIAAQRSTM-VMCANCRARFSRNHD 1500 EKI G NN+ +S + PK F++ +SSE N V T GSRL+D NARNNE+M +NH R D +T L W+++E N+LLS L DTSS+LL SS F MS KG +E+FD K SISGFEG++ G+ E H+EY+F+T QP S SKV SY +EM+ FDS VWL K+ALPLLPKI RH+VTT+C+WC N+F++E +D + ++ MC C+A+FS +H+ Sbjct: 684 EKIFGFDNNLTKVSVDKMEVPK-----FDEV--RNSSEHADGLKNNYRVDTCTVQ-GSRLEDSDNARNNELMSDISNHNRSGVDFVTQLLWRTDEENILLSSLTDTSSRLLQSSA----FGTMSDKGVSELFD--EKYDSISGFEGMRMGTTE------------------------------------------HLEYNFLTTQPGRHSEVSKVLSYDAEMSQGFDSSVWLEKEALPLLPKIGSRHRVTTVCAWCRNEFHHEPIDTGGETGSVGFMCPTCKAKFSGSHN 917 The following BLAST results are available for this feature:
BLAST of g.arboreum_cottongen_reftransV1_0021360 vs. ExPASy TrEMBL
Analysis Date: 2016-11-15 (Homology Analysis for Gossypium arboreum CottonGen RefTrans V1 vs TrEMBL) Total hits: 17
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BLAST of g.arboreum_cottongen_reftransV1_0021360 vs. ExPASy Swiss-Prot
Analysis Date: 2016-11-15 (Homology Analysis for Gossypium arboreum CottonGen RefTrans V1 vs SwissProt) Total hits: 0
Sequences
The
following sequences are available for this feature:
contig sequence >g.arboreum_cottongen_reftransV1_0021360 ID=g.arboreum_cottongen_reftransV1_0021360; Name=g.arboreum_cottongen_reftransV1_0021360; organism=Gossypium arboreum; type=contig; length=2780bpback to top |