g.arboreum_cottongen_reftransV1_0018080, g.arboreum_cottongen_reftransV1_0018080 (contig) Gossypium arboreum
Overview
Alignments
The following features are aligned
Analyses
This contig is derived from or has results from the following analyses
Homology
BLAST of g.arboreum_cottongen_reftransV1_0018080 vs. ExPASy TrEMBL
Match: A0A0B0NVS2_GOSAR (Brefeldin A-inhibited guanine nucleotide-exchange 2 OS=Gossypium arboreum GN=F383_00117 PE=4 SV=1) HSP 1 Score: 393.66 bits (1010), Expect = 1.477e-123 Identity = 189/189 (100.00%), Postives = 189/189 (100.00%), Query Frame = -2 Query: 2 LNLALPKQKSAVDAKSESESIIKQTQAIIRNQGAKRVFYTAQEIELVKPMVEAVGWSLLATFSVTMEEGENRPRVALCMEGFKAGIHITYVLGMDTMRYAFLTSLVRFTFLHAPKDMRSKNVEALRTLLGLCDSEPDSLQDTWNAVLECVSRLEFITTTPVIAASVMHGSNQISRDAVVQSLKELAGKP 568 LNLALPKQKSAVDAKSESESIIKQTQAIIRNQGAKRVFYTAQEIELVKPMVEAVGWSLLATFSVTMEEGENRPRVALCMEGFKAGIHITYVLGMDTMRYAFLTSLVRFTFLHAPKDMRSKNVEALRTLLGLCDSEPDSLQDTWNAVLECVSRLEFITTTPVIAASVMHGSNQISRDAVVQSLKELAGKP Sbjct: 819 LNLALPKQKSAVDAKSESESIIKQTQAIIRNQGAKRVFYTAQEIELVKPMVEAVGWSLLATFSVTMEEGENRPRVALCMEGFKAGIHITYVLGMDTMRYAFLTSLVRFTFLHAPKDMRSKNVEALRTLLGLCDSEPDSLQDTWNAVLECVSRLEFITTTPVIAASVMHGSNQISRDAVVQSLKELAGKP 1007
BLAST of g.arboreum_cottongen_reftransV1_0018080 vs. ExPASy TrEMBL
Match: A0A0D2PTI8_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_001G018700 PE=4 SV=1) HSP 1 Score: 392.119 bits (1006), Expect = 2.018e-123 Identity = 188/189 (99.47%), Postives = 189/189 (100.00%), Query Frame = -2 Query: 2 LNLALPKQKSAVDAKSESESIIKQTQAIIRNQGAKRVFYTAQEIELVKPMVEAVGWSLLATFSVTMEEGENRPRVALCMEGFKAGIHITYVLGMDTMRYAFLTSLVRFTFLHAPKDMRSKNVEALRTLLGLCDSEPDSLQDTWNAVLECVSRLEFITTTPVIAASVMHGSNQISRDAVVQSLKELAGKP 568 LNLALPKQKSAVDAKSESE+IIKQTQAIIRNQGAKRVFYTAQEIELVKPMVEAVGWSLLATFSVTMEEGENRPRVALCMEGFKAGIHITYVLGMDTMRYAFLTSLVRFTFLHAPKDMRSKNVEALRTLLGLCDSEPDSLQDTWNAVLECVSRLEFITTTPVIAASVMHGSNQISRDAVVQSLKELAGKP Sbjct: 807 LNLALPKQKSAVDAKSESEAIIKQTQAIIRNQGAKRVFYTAQEIELVKPMVEAVGWSLLATFSVTMEEGENRPRVALCMEGFKAGIHITYVLGMDTMRYAFLTSLVRFTFLHAPKDMRSKNVEALRTLLGLCDSEPDSLQDTWNAVLECVSRLEFITTTPVIAASVMHGSNQISRDAVVQSLKELAGKP 995
BLAST of g.arboreum_cottongen_reftransV1_0018080 vs. ExPASy TrEMBL
Match: A0A0D2PKJ0_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_001G018700 PE=4 SV=1) HSP 1 Score: 392.119 bits (1006), Expect = 2.789e-123 Identity = 188/189 (99.47%), Postives = 189/189 (100.00%), Query Frame = -2 Query: 2 LNLALPKQKSAVDAKSESESIIKQTQAIIRNQGAKRVFYTAQEIELVKPMVEAVGWSLLATFSVTMEEGENRPRVALCMEGFKAGIHITYVLGMDTMRYAFLTSLVRFTFLHAPKDMRSKNVEALRTLLGLCDSEPDSLQDTWNAVLECVSRLEFITTTPVIAASVMHGSNQISRDAVVQSLKELAGKP 568 LNLALPKQKSAVDAKSESE+IIKQTQAIIRNQGAKRVFYTAQEIELVKPMVEAVGWSLLATFSVTMEEGENRPRVALCMEGFKAGIHITYVLGMDTMRYAFLTSLVRFTFLHAPKDMRSKNVEALRTLLGLCDSEPDSLQDTWNAVLECVSRLEFITTTPVIAASVMHGSNQISRDAVVQSLKELAGKP Sbjct: 807 LNLALPKQKSAVDAKSESEAIIKQTQAIIRNQGAKRVFYTAQEIELVKPMVEAVGWSLLATFSVTMEEGENRPRVALCMEGFKAGIHITYVLGMDTMRYAFLTSLVRFTFLHAPKDMRSKNVEALRTLLGLCDSEPDSLQDTWNAVLECVSRLEFITTTPVIAASVMHGSNQISRDAVVQSLKELAGKP 995
BLAST of g.arboreum_cottongen_reftransV1_0018080 vs. ExPASy TrEMBL
Match: A0A0D2QJD9_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_001G018700 PE=4 SV=1) HSP 1 Score: 392.504 bits (1007), Expect = 3.076e-123 Identity = 188/189 (99.47%), Postives = 189/189 (100.00%), Query Frame = -2 Query: 2 LNLALPKQKSAVDAKSESESIIKQTQAIIRNQGAKRVFYTAQEIELVKPMVEAVGWSLLATFSVTMEEGENRPRVALCMEGFKAGIHITYVLGMDTMRYAFLTSLVRFTFLHAPKDMRSKNVEALRTLLGLCDSEPDSLQDTWNAVLECVSRLEFITTTPVIAASVMHGSNQISRDAVVQSLKELAGKP 568 LNLALPKQKSAVDAKSESE+IIKQTQAIIRNQGAKRVFYTAQEIELVKPMVEAVGWSLLATFSVTMEEGENRPRVALCMEGFKAGIHITYVLGMDTMRYAFLTSLVRFTFLHAPKDMRSKNVEALRTLLGLCDSEPDSLQDTWNAVLECVSRLEFITTTPVIAASVMHGSNQISRDAVVQSLKELAGKP Sbjct: 807 LNLALPKQKSAVDAKSESEAIIKQTQAIIRNQGAKRVFYTAQEIELVKPMVEAVGWSLLATFSVTMEEGENRPRVALCMEGFKAGIHITYVLGMDTMRYAFLTSLVRFTFLHAPKDMRSKNVEALRTLLGLCDSEPDSLQDTWNAVLECVSRLEFITTTPVIAASVMHGSNQISRDAVVQSLKELAGKP 995
BLAST of g.arboreum_cottongen_reftransV1_0018080 vs. ExPASy TrEMBL
Match: A0A0D2N4G4_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_001G018700 PE=4 SV=1) HSP 1 Score: 392.119 bits (1006), Expect = 4.675e-123 Identity = 188/189 (99.47%), Postives = 189/189 (100.00%), Query Frame = -2 Query: 2 LNLALPKQKSAVDAKSESESIIKQTQAIIRNQGAKRVFYTAQEIELVKPMVEAVGWSLLATFSVTMEEGENRPRVALCMEGFKAGIHITYVLGMDTMRYAFLTSLVRFTFLHAPKDMRSKNVEALRTLLGLCDSEPDSLQDTWNAVLECVSRLEFITTTPVIAASVMHGSNQISRDAVVQSLKELAGKP 568 LNLALPKQKSAVDAKSESE+IIKQTQAIIRNQGAKRVFYTAQEIELVKPMVEAVGWSLLATFSVTMEEGENRPRVALCMEGFKAGIHITYVLGMDTMRYAFLTSLVRFTFLHAPKDMRSKNVEALRTLLGLCDSEPDSLQDTWNAVLECVSRLEFITTTPVIAASVMHGSNQISRDAVVQSLKELAGKP Sbjct: 807 LNLALPKQKSAVDAKSESEAIIKQTQAIIRNQGAKRVFYTAQEIELVKPMVEAVGWSLLATFSVTMEEGENRPRVALCMEGFKAGIHITYVLGMDTMRYAFLTSLVRFTFLHAPKDMRSKNVEALRTLLGLCDSEPDSLQDTWNAVLECVSRLEFITTTPVIAASVMHGSNQISRDAVVQSLKELAGKP 995
BLAST of g.arboreum_cottongen_reftransV1_0018080 vs. ExPASy TrEMBL
Match: A0A067G2C5_CITSI (Uncharacterized protein (Fragment) OS=Citrus sinensis GN=CISIN_1g0002573mg PE=4 SV=1) HSP 1 Score: 344.354 bits (882), Expect = 2.590e-113 Identity = 164/190 (86.32%), Postives = 176/190 (92.63%), Query Frame = -2 Query: 2 LNLALPKQKSAVDAKSESESIIKQTQAIIRNQGAKR-VFYTAQEIELVKPMVEAVGWSLLATFSVTMEEGENRPRVALCMEGFKAGIHITYVLGMDTMRYAFLTSLVRFTFLHAPKDMRSKNVEALRTLLGLCDSEPDSLQDTWNAVLECVSRLEFITTTPVIAASVMHGSNQISRDAVVQSLKELAGKP 568 LNLALPKQKS+ D KSESE+I+KQTQAI RNQG KR VFYT+ IELV+PMVEAVGW LLA FSVTMEEGEN+PRVALCMEGFKAGIHIT VLGMDTMRYAFLTSLVRFTFLHAPK+MRSKNVEALRTLL LCD+EPDSLQDTWNAVLECVSRLEFI +TP I+A+VM GSNQIS+DAVVQSLKELAGKP Sbjct: 99 LNLALPKQKSSTDTKSESEAIVKQTQAIFRNQGVKRGVFYTSNRIELVRPMVEAVGWPLLAAFSVTMEEGENKPRVALCMEGFKAGIHITQVLGMDTMRYAFLTSLVRFTFLHAPKEMRSKNVEALRTLLALCDTEPDSLQDTWNAVLECVSRLEFIMSTPAISATVMLGSNQISKDAVVQSLKELAGKP 288
BLAST of g.arboreum_cottongen_reftransV1_0018080 vs. ExPASy TrEMBL
Match: A0A061GLV9_THECC (HOPM interactor 7 isoform 3 (Fragment) OS=Theobroma cacao GN=TCM_037433 PE=4 SV=1) HSP 1 Score: 359.762 bits (922), Expect = 5.296e-112 Identity = 173/190 (91.05%), Postives = 181/190 (95.26%), Query Frame = -2 Query: 2 LNLALPKQKSAVDAKSESESIIKQTQAIIRNQGAKR-VFYTAQEIELVKPMVEAVGWSLLATFSVTMEEGENRPRVALCMEGFKAGIHITYVLGMDTMRYAFLTSLVRFTFLHAPKDMRSKNVEALRTLLGLCDSEPDSLQDTWNAVLECVSRLEFITTTPVIAASVMHGSNQISRDAVVQSLKELAGKP 568 LNLALPK KSA DAKSESE+IIKQTQAIIRNQ AKR VFY AQEIELV+PMVEAVGW LLATFSVTMEEGEN+PRV LCMEGF+AGIHITYVLGMDTMRYAFLTSLVRFTFLHAPK+MRSKNVEALRTLLGLCD EPDSLQDTWNAVLECVSRLEFIT+TP IAA+VMHGSNQIS+DAVVQSLKELAGKP Sbjct: 805 LNLALPKTKSATDAKSESEAIIKQTQAIIRNQEAKRGVFYIAQEIELVRPMVEAVGWPLLATFSVTMEEGENKPRVVLCMEGFRAGIHITYVLGMDTMRYAFLTSLVRFTFLHAPKEMRSKNVEALRTLLGLCDLEPDSLQDTWNAVLECVSRLEFITSTPAIAATVMHGSNQISKDAVVQSLKELAGKP 994
BLAST of g.arboreum_cottongen_reftransV1_0018080 vs. ExPASy TrEMBL
Match: A0A061GKQ1_THECC (HOPM interactor 7 isoform 1 OS=Theobroma cacao GN=TCM_037433 PE=4 SV=1) HSP 1 Score: 359.762 bits (922), Expect = 2.278e-111 Identity = 173/190 (91.05%), Postives = 181/190 (95.26%), Query Frame = -2 Query: 2 LNLALPKQKSAVDAKSESESIIKQTQAIIRNQGAKR-VFYTAQEIELVKPMVEAVGWSLLATFSVTMEEGENRPRVALCMEGFKAGIHITYVLGMDTMRYAFLTSLVRFTFLHAPKDMRSKNVEALRTLLGLCDSEPDSLQDTWNAVLECVSRLEFITTTPVIAASVMHGSNQISRDAVVQSLKELAGKP 568 LNLALPK KSA DAKSESE+IIKQTQAIIRNQ AKR VFY AQEIELV+PMVEAVGW LLATFSVTMEEGEN+PRV LCMEGF+AGIHITYVLGMDTMRYAFLTSLVRFTFLHAPK+MRSKNVEALRTLLGLCD EPDSLQDTWNAVLECVSRLEFIT+TP IAA+VMHGSNQIS+DAVVQSLKELAGKP Sbjct: 805 LNLALPKTKSATDAKSESEAIIKQTQAIIRNQEAKRGVFYIAQEIELVRPMVEAVGWPLLATFSVTMEEGENKPRVVLCMEGFRAGIHITYVLGMDTMRYAFLTSLVRFTFLHAPKEMRSKNVEALRTLLGLCDLEPDSLQDTWNAVLECVSRLEFITSTPAIAATVMHGSNQISKDAVVQSLKELAGKP 994
BLAST of g.arboreum_cottongen_reftransV1_0018080 vs. ExPASy TrEMBL
Match: W9SKB4_9ROSA (Brefeldin A-inhibited guanine nucleotide-exchange protein 1 OS=Morus notabilis GN=L484_019576 PE=4 SV=1) HSP 1 Score: 343.584 bits (880), Expect = 1.122e-105 Identity = 162/190 (85.26%), Postives = 178/190 (93.68%), Query Frame = -2 Query: 2 LNLALPKQKSAVDAKSESESIIKQTQAIIRNQGAKR-VFYTAQEIELVKPMVEAVGWSLLATFSVTMEEGENRPRVALCMEGFKAGIHITYVLGMDTMRYAFLTSLVRFTFLHAPKDMRSKNVEALRTLLGLCDSEPDSLQDTWNAVLECVSRLEFITTTPVIAASVMHGSNQISRDAVVQSLKELAGKP 568 LNLALPK++S D K+ESE+IIKQTQ I RNQG KR VFYT+Q+IELV+PMVEAVGW LLATFSVTMEEG+N+ RVALCMEGF+AGIHIT+VLGMDTMRYAFLTSLVRFTFLHAPK+MRSKNVEALRTLL LCDSE DSLQDTWNA+LECVSRLEFIT+TP IAA+VMHGSNQISRDAV+QSLKELAGKP Sbjct: 794 LNLALPKRQSTTDTKAESEAIIKQTQTIFRNQGTKRGVFYTSQQIELVRPMVEAVGWPLLATFSVTMEEGDNKARVALCMEGFRAGIHITHVLGMDTMRYAFLTSLVRFTFLHAPKEMRSKNVEALRTLLALCDSETDSLQDTWNAILECVSRLEFITSTPAIAATVMHGSNQISRDAVLQSLKELAGKP 983
BLAST of g.arboreum_cottongen_reftransV1_0018080 vs. ExPASy TrEMBL
Match: F6HGY7_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_11s0016g00170 PE=4 SV=1) HSP 1 Score: 343.584 bits (880), Expect = 1.491e-105 Identity = 162/190 (85.26%), Postives = 180/190 (94.74%), Query Frame = -2 Query: 2 LNLALPKQKSAVDAKSESESIIKQTQAIIRNQGAKR-VFYTAQEIELVKPMVEAVGWSLLATFSVTMEEGENRPRVALCMEGFKAGIHITYVLGMDTMRYAFLTSLVRFTFLHAPKDMRSKNVEALRTLLGLCDSEPDSLQDTWNAVLECVSRLEFITTTPVIAASVMHGSNQISRDAVVQSLKELAGKP 568 LNLALPK+KS+VD KSESE+IIKQTQAI RNQGAKR VFYT+Q+IELV+PMVEAVGW LLATFSVTMEEG+N+PRV LCMEGF+AGIHIT+V+GMDTMRYAFLTSLVRFTFLHAPK+MRSKNVEALRTLL LCDSE +SLQDTWNAVLECVSRLEFIT+TP IAA+VM SNQISRDA++QSL+ELAGKP Sbjct: 806 LNLALPKRKSSVDTKSESEAIIKQTQAIFRNQGAKRGVFYTSQQIELVRPMVEAVGWPLLATFSVTMEEGDNKPRVLLCMEGFRAGIHITHVIGMDTMRYAFLTSLVRFTFLHAPKEMRSKNVEALRTLLALCDSETNSLQDTWNAVLECVSRLEFITSTPAIAATVMQASNQISRDAILQSLRELAGKP 995
BLAST of g.arboreum_cottongen_reftransV1_0018080 vs. ExPASy Swiss-Prot
Match: BIG5_ARATH (Brefeldin A-inhibited guanine nucleotide-exchange protein 5 OS=Arabidopsis thaliana GN=BIG5 PE=1 SV=2) HSP 1 Score: 324.324 bits (830), Expect = 1.091e-100 Identity = 149/190 (78.42%), Postives = 170/190 (89.47%), Query Frame = -2 Query: 2 LNLALPKQKSAVDAKSESESIIKQTQAIIRNQGAKR-VFYTAQEIELVKPMVEAVGWSLLATFSVTMEEGENRPRVALCMEGFKAGIHITYVLGMDTMRYAFLTSLVRFTFLHAPKDMRSKNVEALRTLLGLCDSEPDSLQDTWNAVLECVSRLEFITTTPVIAASVMHGSNQISRDAVVQSLKELAGKP 568 LNL LPK+ SA DAKSE+E I+++TQ I R G KR VF+T +++++++PMVEAVGW LLA FSVTME G+N+PR+ LCMEGFKAGIHI YVLGMDTMRYAFLTSLVRFTFLHAPK+MRSKNVEALR LLGLCDSEPD+LQDTWNAVLECVSRLEFI +TP IAA+VMHGSNQISRD VVQSLKELAG+P Sbjct: 789 LNLGLPKRISAADAKSETEDIVRKTQEIFRKHGVKRGVFHTVEQVDIIRPMVEAVGWPLLAAFSVTMEVGDNKPRILLCMEGFKAGIHIAYVLGMDTMRYAFLTSLVRFTFLHAPKEMRSKNVEALRILLGLCDSEPDTLQDTWNAVLECVSRLEFIISTPGIAATVMHGSNQISRDGVVQSLKELAGRP 978
BLAST of g.arboreum_cottongen_reftransV1_0018080 vs. ExPASy Swiss-Prot
Match: BIG3_ARATH (Brefeldin A-inhibited guanine nucleotide-exchange protein 3 OS=Arabidopsis thaliana GN=BIG3 PE=1 SV=1) HSP 1 Score: 119.398 bits (298), Expect = 4.488e-29 Identity = 56/158 (35.44%), Postives = 99/158 (62.66%), Query Frame = -2 Query: 101 LNLALPKQKSAVDAKSESESIIKQTQAIIRNQGAKR--VFYTAQEIELVKPMVEAVGWSLLATFSVTMEEGENRPRVALCMEGFKAGIHITYVLGMDTMRYAFLTSLVRFTFLHAPKDMRSKNVEALRTLLGLCDSEPDSLQDTWNAVLECVSRLEFI 568 LN+ +P++ ++ ++ S+ +I+ Q + + K V+Y A ++ +++ MVE +LA FSV +++ ++ LC+EGF IH+T V+ + T R AF+TSL +FT LH+P D++ KN+EA++ ++ L + E + LQD W +L CVSR E + Sbjct: 817 LNIVVPRRGDDMNMET-SDDLIRHMQERFKEKARKSESVYYAASDVIILRFMVEVCWAPMLAAFSVPLDQSDDAVITTLCLEGFHHAIHVTSVMSLKTHRDAFVTSLAKFTSLHSPADIKQKNIEAIKAIVKLAEEEGNYLQDAWEHILTCVSRFEHL 973
BLAST of g.arboreum_cottongen_reftransV1_0018080 vs. ExPASy Swiss-Prot
Match: BIG2_ARATH (Brefeldin A-inhibited guanine nucleotide-exchange protein 2 OS=Arabidopsis thaliana GN=BIG2 PE=2 SV=1) HSP 1 Score: 116.316 bits (290), Expect = 5.163e-28 Identity = 57/156 (36.54%), Postives = 96/156 (61.54%), Query Frame = -2 Query: 107 LNLALPKQKSAVDAKSESESIIKQTQAIIRNQGAKR--VFYTAQEIELVKPMVEAVGWSLLATFSVTMEEGENRPRVALCMEGFKAGIHITYVLGMDTMRYAFLTSLVRFTFLHAPKDMRSKNVEALRTLLGLCDSEPDSLQDTWNAVLECVSRLE 568 LN+ + KQ A++ S+ ++K Q + + K +Y A ++ +++ M+EA +LA FSV +++ ++ + +C+EGF IH T ++ M T R AF+TSL +FT LH+P D++ +N+EA++ +L L D E + LQD W +L CVSR E Sbjct: 826 LNIVIRKQWGDSYAET-SDDLMKHMQEQFKEKARKSESTYYAATDVVILRFMIEACWAPMLAAFSVPLDQSDDLIVINICLEGFHHAIHATSLMSMKTHRDAFVTSLAKFTSLHSPADIKQRNIEAIKAILRLADEEGNYLQDAWEHILTCVSRFE 980
BLAST of g.arboreum_cottongen_reftransV1_0018080 vs. ExPASy Swiss-Prot
Match: BIG1_ARATH (Brefeldin A-inhibited guanine nucleotide-exchange protein 1 OS=Arabidopsis thaliana GN=BIG1 PE=2 SV=1) HSP 1 Score: 108.227 bits (269), Expect = 2.454e-25 Identity = 48/138 (34.78%), Postives = 85/138 (61.59%), Query Frame = -2 Query: 101 IIKQTQAIIRNQGAKR--VFYTAQEIELVKPMVEAVGWSLLATFSVTMEEGENRPRVALCMEGFKAGIHITYVLGMDTMRYAFLTSLVRFTFLHAPKDMRSKNVEALRTLLGLCDSEPDSLQDTWNAVLECVSRLEFI 508 +IK Q R++ K ++ ++ +++ MVE +LA FSVT+++ ++R C+ GF+ +H+T V+GM T R AF+TS+ +FT LH DM+ KNV+A++ ++ + + + LQD W +L C+SR+E + Sbjct: 767 LIKDIQEKFRSKSGKSESAYHVVTDVAILRFMVEVSWGPMLAAFSVTLDQSDDRLAAVECLRGFRYAVHVTAVMGMQTQRDAFVTSMAKFTNLHCAGDMKQKNVDAVKAIISIAIEDGNHLQDAWEHILTCLSRIEHL 904
BLAST of g.arboreum_cottongen_reftransV1_0018080 vs. ExPASy Swiss-Prot
Match: BIG4_ARATH (Brefeldin A-inhibited guanine nucleotide-exchange protein 4 OS=Arabidopsis thaliana GN=BIG4 PE=3 SV=1) HSP 1 Score: 106.686 bits (265), Expect = 8.587e-25 Identity = 45/133 (33.83%), Postives = 87/133 (65.41%), Query Frame = -2 Query: 101 QTQAIIRNQGAKRVFYTAQEIELVKPMVEAVGWSLLATFSVTMEEGENRPRVALCMEGFKAGIHITYVLGMDTMRYAFLTSLVRFTFLHAPKDMRSKNVEALRTLLGLCDSEPDSLQDTWNAVLECVSRLEFI 499 Q Q + + ++ V++T +I +++ ++E +LA FSVT+++ ++R +LC++GF+ +H+T V+GM T R AF+TS+ +FT LH DM+ KNV+A++ ++ + + + L +W +L C+SR+E + Sbjct: 795 QEQFQAKPEKSESVYHTVTDISILRFILEVSWGPMLAAFSVTIDQSDDRLATSLCLQGFRYAVHVTAVMGMQTQRDAFVTSMAKFTNLHCAADMKQKNVDAVKAIITIAIEDGNHLHGSWEHILTCLSRIEHL 927
BLAST of g.arboreum_cottongen_reftransV1_0018080 vs. ExPASy Swiss-Prot
Match: SEC7A_SCHPO (Protein transport protein sec71 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=sec71 PE=1 SV=1) HSP 1 Score: 90.1225 bits (222), Expect = 3.348e-19 Identity = 42/118 (35.59%), Postives = 72/118 (61.02%), Query Frame = -2 Query: 107 VFYTAQEIELVKPMVEAVGWSLLATFSVTMEEGENRPRVALCMEGFKAGIHITYVLGMDTMRYAFLTSLVRFTFLHAPKDMRSKNVEALRTLLGLCDSEPDSLQDTWNAVLECVSRLE 460 ++YTA+ E V PM EAV +LA FS ++ + + L ++GF+ +++ + MD R AF+ +L +FT L+ +++ N+ AL+TLL + + D L+D+W VL C+S+LE Sbjct: 958 IYYTARHFEHVCPMFEAVWMPILAAFSEPLQLSSDPALIQLSLDGFRLAMNVIFFFSMDLPRNAFMQTLTKFTHLNNTSELKWTNMHALKTLLEISLAHGDKLRDSWKDVLLCISQLE 1075
BLAST of g.arboreum_cottongen_reftransV1_0018080 vs. ExPASy Swiss-Prot
Match: BIG2_HUMAN (Brefeldin A-inhibited guanine nucleotide-exchange protein 2 OS=Homo sapiens GN=ARFGEF2 PE=1 SV=3) HSP 1 Score: 85.5001 bits (210), Expect = 1.203e-17 Identity = 47/158 (29.75%), Postives = 91/158 (57.59%), Query Frame = -2 Query: 104 NLALPKQKSAVDAKSESESIIKQTQAIIRN-QGAKRVFYTAQEIELVKPMVEAVGWSLLATFSVTMEEGENRPRVALCMEGFKAGIHITYVLGMDTMRYAFLTSLVRFTFLHAPK---DMRSKNVEALRTLLGLCDSEPDSLQDTWNAVLECVSRLEF 565 N+A KQ+ + E E + K +A++ AK F +A ++ V+PM + V LLA +S+ ++ ++ +LC+EG + I I + GM R A++ +L RF+ L A +M+ KN++ ++TL+ + ++ + L ++W+ +L+C+S+LE Sbjct: 845 NVASEKQRRLL-YNLEMEQMAKTAKALMEAVSHAKAPFTSATHLDHVRPMFKLVWTPLLAAYSIGLQNCDDTEVASLCLEGIRCAIRIACIFGMQLERDAYVQALARFSLLTASSSITEMKQKNIDTIKTLITVAHTDGNYLGNSWHEILKCISQLEL 1001
BLAST of g.arboreum_cottongen_reftransV1_0018080 vs. ExPASy Swiss-Prot
Match: BIG2_RAT (Brefeldin A-inhibited guanine nucleotide-exchange protein 2 OS=Rattus norvegicus GN=Arfgef2 PE=1 SV=1) HSP 1 Score: 85.5001 bits (210), Expect = 1.489e-17 Identity = 46/158 (29.11%), Postives = 91/158 (57.59%), Query Frame = -2 Query: 104 NLALPKQKSAVDAKSESESIIKQTQAIIRN-QGAKRVFYTAQEIELVKPMVEAVGWSLLATFSVTMEEGENRPRVALCMEGFKAGIHITYVLGMDTMRYAFLTSLVRFTFLHAPK---DMRSKNVEALRTLLGLCDSEPDSLQDTWNAVLECVSRLEF 565 N+A KQ+ + E E + K +A++ AK F +A ++ V+PM + V LLA +S+ ++ ++ +LC+EG + + I + GM R A++ +L RF+ L A +M+ KN++ ++TL+ + ++ + L ++W+ +L+C+S+LE Sbjct: 852 NVASEKQRRLL-YNVEMEQMAKTAKALMEAVSHAKAPFTSATHLDHVRPMFKLVWTPLLAAYSIGLQNCDDTEVASLCLEGIRCAVRIACIFGMQLERDAYVQALARFSLLTASSSITEMKQKNIDTIKTLITVAHTDGNYLGNSWHEILKCISQLEL 1008
BLAST of g.arboreum_cottongen_reftransV1_0018080 vs. ExPASy Swiss-Prot
Match: BIG2_MOUSE (Brefeldin A-inhibited guanine nucleotide-exchange protein 2 OS=Mus musculus GN=Arfgef2 PE=1 SV=1) HSP 1 Score: 84.3445 bits (207), Expect = 2.762e-17 Identity = 42/143 (29.37%), Postives = 84/143 (58.74%), Query Frame = -2 Query: 104 ESESIIKQTQAIIRN-QGAKRVFYTAQEIELVKPMVEAVGWSLLATFSVTMEEGENRPRVALCMEGFKAGIHITYVLGMDTMRYAFLTSLVRFTFLHAPK---DMRSKNVEALRTLLGLCDSEPDSLQDTWNAVLECVSRLEF 520 E E + K +A++ AK F +A ++ V+PM + V LLA +S+ ++ ++ +LC+EG + + I + GM R A++ +L RF+ L A +M+ KN++ ++TL+ + ++ + L ++W+ +L+C+S+LE Sbjct: 866 EMEQMAKTAKALMEAVSHAKAPFTSATHLDHVRPMFKLVWTPLLAAYSIGLQNCDDTEVASLCLEGIRCAVRIACIFGMQLERDAYVQALARFSLLTASSSITEMKQKNIDTIKTLITVAHTDGNYLGNSWHEILKCISQLEL 1008
BLAST of g.arboreum_cottongen_reftransV1_0018080 vs. ExPASy Swiss-Prot
Match: SEC7B_SCHPO (Protein transport protein sec72 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=sec72 PE=1 SV=1) HSP 1 Score: 82.4185 bits (202), Expect = 1.548e-16 Identity = 37/127 (29.13%), Postives = 75/127 (59.06%), Query Frame = -2 Query: 107 RNQGAKR--VFYTAQEIELVKPMVEAVGWSLLATFSVTMEEGENRPRVALCMEGFKAGIHITYVLGMDTMRYAFLTSLVRFTFLHAPKDMRSKNVEALRTLLGLCDSEPDSLQDTWNAVLECVSRLE 481 + G+++ V+Y A E + PM+EA +LA S ++ + + +C++GF+ + I + +D +R AF+ +L FT LH+ +++ +N ++TLL + +E ++L+D+W +L +S+LE Sbjct: 952 QKHGSQKTNVYYNATHFEHIGPMLEATWMPILAALSNPLQNSDYVNELNMCLDGFQLVVRIACLFDLDLIRDAFIKTLTNFTNLHSTSEIKLRNTMVIKTLLRIASTEGNNLKDSWKDILTIISQLE 1078 The following BLAST results are available for this feature:
BLAST of g.arboreum_cottongen_reftransV1_0018080 vs. ExPASy TrEMBL
Analysis Date: 2016-11-15 (Homology Analysis for Gossypium arboreum CottonGen RefTrans V1 vs TrEMBL) Total hits: 25
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BLAST of g.arboreum_cottongen_reftransV1_0018080 vs. ExPASy Swiss-Prot
Analysis Date: 2016-11-15 (Homology Analysis for Gossypium arboreum CottonGen RefTrans V1 vs SwissProt) Total hits: 15
Pagesback to topInterPro
Analysis Name: InterProScan analysis for Gossypium arboreum CottonGen RefTrans V1
Date Performed: 2016-11-14
Sequences
The
following sequences are available for this feature:
contig sequence >g.arboreum_cottongen_reftransV1_0018080 ID=g.arboreum_cottongen_reftransV1_0018080; Name=g.arboreum_cottongen_reftransV1_0018080; organism=Gossypium arboreum; type=contig; length=569bpback to top |