g.arboreum_cottongen_reftransV1_0018080, g.arboreum_cottongen_reftransV1_0018080 (contig) Gossypium arboreum

Overview
Nameg.arboreum_cottongen_reftransV1_0018080
Unique Nameg.arboreum_cottongen_reftransV1_0018080
Typecontig
OrganismGossypium arboreum (Tree cotton)
Sequence length569
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Chr1chromosomeg.arboreum_cottongen_reftransV1_0018080:1..569 .
Chr1:2444765..2445569 +
Homology
[Close]
BLAST of g.arboreum_cottongen_reftransV1_0018080 vs. ExPASy TrEMBL
Match: A0A0B0NVS2_GOSAR (Brefeldin A-inhibited guanine nucleotide-exchange 2 OS=Gossypium arboreum GN=F383_00117 PE=4 SV=1)

HSP 1 Score: 393.66 bits (1010), Expect = 1.477e-123
Identity = 189/189 (100.00%), Postives = 189/189 (100.00%), Query Frame = -2 
Query:    2 LNLALPKQKSAVDAKSESESIIKQTQAIIRNQGAKRVFYTAQEIELVKPMVEAVGWSLLATFSVTMEEGENRPRVALCMEGFKAGIHITYVLGMDTMRYAFLTSLVRFTFLHAPKDMRSKNVEALRTLLGLCDSEPDSLQDTWNAVLECVSRLEFITTTPVIAASVMHGSNQISRDAVVQSLKELAGKP 568
            LNLALPKQKSAVDAKSESESIIKQTQAIIRNQGAKRVFYTAQEIELVKPMVEAVGWSLLATFSVTMEEGENRPRVALCMEGFKAGIHITYVLGMDTMRYAFLTSLVRFTFLHAPKDMRSKNVEALRTLLGLCDSEPDSLQDTWNAVLECVSRLEFITTTPVIAASVMHGSNQISRDAVVQSLKELAGKP
Sbjct:  819 LNLALPKQKSAVDAKSESESIIKQTQAIIRNQGAKRVFYTAQEIELVKPMVEAVGWSLLATFSVTMEEGENRPRVALCMEGFKAGIHITYVLGMDTMRYAFLTSLVRFTFLHAPKDMRSKNVEALRTLLGLCDSEPDSLQDTWNAVLECVSRLEFITTTPVIAASVMHGSNQISRDAVVQSLKELAGKP 1007
[Close]
BLAST of g.arboreum_cottongen_reftransV1_0018080 vs. ExPASy TrEMBL
Match: A0A0D2PTI8_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_001G018700 PE=4 SV=1)

HSP 1 Score: 392.119 bits (1006), Expect = 2.018e-123
Identity = 188/189 (99.47%), Postives = 189/189 (100.00%), Query Frame = -2 
Query:    2 LNLALPKQKSAVDAKSESESIIKQTQAIIRNQGAKRVFYTAQEIELVKPMVEAVGWSLLATFSVTMEEGENRPRVALCMEGFKAGIHITYVLGMDTMRYAFLTSLVRFTFLHAPKDMRSKNVEALRTLLGLCDSEPDSLQDTWNAVLECVSRLEFITTTPVIAASVMHGSNQISRDAVVQSLKELAGKP 568
            LNLALPKQKSAVDAKSESE+IIKQTQAIIRNQGAKRVFYTAQEIELVKPMVEAVGWSLLATFSVTMEEGENRPRVALCMEGFKAGIHITYVLGMDTMRYAFLTSLVRFTFLHAPKDMRSKNVEALRTLLGLCDSEPDSLQDTWNAVLECVSRLEFITTTPVIAASVMHGSNQISRDAVVQSLKELAGKP
Sbjct:  807 LNLALPKQKSAVDAKSESEAIIKQTQAIIRNQGAKRVFYTAQEIELVKPMVEAVGWSLLATFSVTMEEGENRPRVALCMEGFKAGIHITYVLGMDTMRYAFLTSLVRFTFLHAPKDMRSKNVEALRTLLGLCDSEPDSLQDTWNAVLECVSRLEFITTTPVIAASVMHGSNQISRDAVVQSLKELAGKP 995
[Close]
BLAST of g.arboreum_cottongen_reftransV1_0018080 vs. ExPASy TrEMBL
Match: A0A0D2PKJ0_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_001G018700 PE=4 SV=1)

HSP 1 Score: 392.119 bits (1006), Expect = 2.789e-123
Identity = 188/189 (99.47%), Postives = 189/189 (100.00%), Query Frame = -2 
Query:    2 LNLALPKQKSAVDAKSESESIIKQTQAIIRNQGAKRVFYTAQEIELVKPMVEAVGWSLLATFSVTMEEGENRPRVALCMEGFKAGIHITYVLGMDTMRYAFLTSLVRFTFLHAPKDMRSKNVEALRTLLGLCDSEPDSLQDTWNAVLECVSRLEFITTTPVIAASVMHGSNQISRDAVVQSLKELAGKP 568
            LNLALPKQKSAVDAKSESE+IIKQTQAIIRNQGAKRVFYTAQEIELVKPMVEAVGWSLLATFSVTMEEGENRPRVALCMEGFKAGIHITYVLGMDTMRYAFLTSLVRFTFLHAPKDMRSKNVEALRTLLGLCDSEPDSLQDTWNAVLECVSRLEFITTTPVIAASVMHGSNQISRDAVVQSLKELAGKP
Sbjct:  807 LNLALPKQKSAVDAKSESEAIIKQTQAIIRNQGAKRVFYTAQEIELVKPMVEAVGWSLLATFSVTMEEGENRPRVALCMEGFKAGIHITYVLGMDTMRYAFLTSLVRFTFLHAPKDMRSKNVEALRTLLGLCDSEPDSLQDTWNAVLECVSRLEFITTTPVIAASVMHGSNQISRDAVVQSLKELAGKP 995
[Close]
BLAST of g.arboreum_cottongen_reftransV1_0018080 vs. ExPASy TrEMBL
Match: A0A0D2QJD9_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_001G018700 PE=4 SV=1)

HSP 1 Score: 392.504 bits (1007), Expect = 3.076e-123
Identity = 188/189 (99.47%), Postives = 189/189 (100.00%), Query Frame = -2 
Query:    2 LNLALPKQKSAVDAKSESESIIKQTQAIIRNQGAKRVFYTAQEIELVKPMVEAVGWSLLATFSVTMEEGENRPRVALCMEGFKAGIHITYVLGMDTMRYAFLTSLVRFTFLHAPKDMRSKNVEALRTLLGLCDSEPDSLQDTWNAVLECVSRLEFITTTPVIAASVMHGSNQISRDAVVQSLKELAGKP 568
            LNLALPKQKSAVDAKSESE+IIKQTQAIIRNQGAKRVFYTAQEIELVKPMVEAVGWSLLATFSVTMEEGENRPRVALCMEGFKAGIHITYVLGMDTMRYAFLTSLVRFTFLHAPKDMRSKNVEALRTLLGLCDSEPDSLQDTWNAVLECVSRLEFITTTPVIAASVMHGSNQISRDAVVQSLKELAGKP
Sbjct:  807 LNLALPKQKSAVDAKSESEAIIKQTQAIIRNQGAKRVFYTAQEIELVKPMVEAVGWSLLATFSVTMEEGENRPRVALCMEGFKAGIHITYVLGMDTMRYAFLTSLVRFTFLHAPKDMRSKNVEALRTLLGLCDSEPDSLQDTWNAVLECVSRLEFITTTPVIAASVMHGSNQISRDAVVQSLKELAGKP 995
[Close]
BLAST of g.arboreum_cottongen_reftransV1_0018080 vs. ExPASy TrEMBL
Match: A0A0D2N4G4_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_001G018700 PE=4 SV=1)

HSP 1 Score: 392.119 bits (1006), Expect = 4.675e-123
Identity = 188/189 (99.47%), Postives = 189/189 (100.00%), Query Frame = -2 
Query:    2 LNLALPKQKSAVDAKSESESIIKQTQAIIRNQGAKRVFYTAQEIELVKPMVEAVGWSLLATFSVTMEEGENRPRVALCMEGFKAGIHITYVLGMDTMRYAFLTSLVRFTFLHAPKDMRSKNVEALRTLLGLCDSEPDSLQDTWNAVLECVSRLEFITTTPVIAASVMHGSNQISRDAVVQSLKELAGKP 568
            LNLALPKQKSAVDAKSESE+IIKQTQAIIRNQGAKRVFYTAQEIELVKPMVEAVGWSLLATFSVTMEEGENRPRVALCMEGFKAGIHITYVLGMDTMRYAFLTSLVRFTFLHAPKDMRSKNVEALRTLLGLCDSEPDSLQDTWNAVLECVSRLEFITTTPVIAASVMHGSNQISRDAVVQSLKELAGKP
Sbjct:  807 LNLALPKQKSAVDAKSESEAIIKQTQAIIRNQGAKRVFYTAQEIELVKPMVEAVGWSLLATFSVTMEEGENRPRVALCMEGFKAGIHITYVLGMDTMRYAFLTSLVRFTFLHAPKDMRSKNVEALRTLLGLCDSEPDSLQDTWNAVLECVSRLEFITTTPVIAASVMHGSNQISRDAVVQSLKELAGKP 995
[Close]
BLAST of g.arboreum_cottongen_reftransV1_0018080 vs. ExPASy TrEMBL
Match: A0A067G2C5_CITSI (Uncharacterized protein (Fragment) OS=Citrus sinensis GN=CISIN_1g0002573mg PE=4 SV=1)

HSP 1 Score: 344.354 bits (882), Expect = 2.590e-113
Identity = 164/190 (86.32%), Postives = 176/190 (92.63%), Query Frame = -2 
Query:    2 LNLALPKQKSAVDAKSESESIIKQTQAIIRNQGAKR-VFYTAQEIELVKPMVEAVGWSLLATFSVTMEEGENRPRVALCMEGFKAGIHITYVLGMDTMRYAFLTSLVRFTFLHAPKDMRSKNVEALRTLLGLCDSEPDSLQDTWNAVLECVSRLEFITTTPVIAASVMHGSNQISRDAVVQSLKELAGKP 568
            LNLALPKQKS+ D KSESE+I+KQTQAI RNQG KR VFYT+  IELV+PMVEAVGW LLA FSVTMEEGEN+PRVALCMEGFKAGIHIT VLGMDTMRYAFLTSLVRFTFLHAPK+MRSKNVEALRTLL LCD+EPDSLQDTWNAVLECVSRLEFI +TP I+A+VM GSNQIS+DAVVQSLKELAGKP
Sbjct:   99 LNLALPKQKSSTDTKSESEAIVKQTQAIFRNQGVKRGVFYTSNRIELVRPMVEAVGWPLLAAFSVTMEEGENKPRVALCMEGFKAGIHITQVLGMDTMRYAFLTSLVRFTFLHAPKEMRSKNVEALRTLLALCDTEPDSLQDTWNAVLECVSRLEFIMSTPAISATVMLGSNQISKDAVVQSLKELAGKP 288
[Close]
BLAST of g.arboreum_cottongen_reftransV1_0018080 vs. ExPASy TrEMBL
Match: A0A061GLV9_THECC (HOPM interactor 7 isoform 3 (Fragment) OS=Theobroma cacao GN=TCM_037433 PE=4 SV=1)

HSP 1 Score: 359.762 bits (922), Expect = 5.296e-112
Identity = 173/190 (91.05%), Postives = 181/190 (95.26%), Query Frame = -2 
Query:    2 LNLALPKQKSAVDAKSESESIIKQTQAIIRNQGAKR-VFYTAQEIELVKPMVEAVGWSLLATFSVTMEEGENRPRVALCMEGFKAGIHITYVLGMDTMRYAFLTSLVRFTFLHAPKDMRSKNVEALRTLLGLCDSEPDSLQDTWNAVLECVSRLEFITTTPVIAASVMHGSNQISRDAVVQSLKELAGKP 568
            LNLALPK KSA DAKSESE+IIKQTQAIIRNQ AKR VFY AQEIELV+PMVEAVGW LLATFSVTMEEGEN+PRV LCMEGF+AGIHITYVLGMDTMRYAFLTSLVRFTFLHAPK+MRSKNVEALRTLLGLCD EPDSLQDTWNAVLECVSRLEFIT+TP IAA+VMHGSNQIS+DAVVQSLKELAGKP
Sbjct:  805 LNLALPKTKSATDAKSESEAIIKQTQAIIRNQEAKRGVFYIAQEIELVRPMVEAVGWPLLATFSVTMEEGENKPRVVLCMEGFRAGIHITYVLGMDTMRYAFLTSLVRFTFLHAPKEMRSKNVEALRTLLGLCDLEPDSLQDTWNAVLECVSRLEFITSTPAIAATVMHGSNQISKDAVVQSLKELAGKP 994
[Close]
BLAST of g.arboreum_cottongen_reftransV1_0018080 vs. ExPASy TrEMBL
Match: A0A061GKQ1_THECC (HOPM interactor 7 isoform 1 OS=Theobroma cacao GN=TCM_037433 PE=4 SV=1)

HSP 1 Score: 359.762 bits (922), Expect = 2.278e-111
Identity = 173/190 (91.05%), Postives = 181/190 (95.26%), Query Frame = -2 
Query:    2 LNLALPKQKSAVDAKSESESIIKQTQAIIRNQGAKR-VFYTAQEIELVKPMVEAVGWSLLATFSVTMEEGENRPRVALCMEGFKAGIHITYVLGMDTMRYAFLTSLVRFTFLHAPKDMRSKNVEALRTLLGLCDSEPDSLQDTWNAVLECVSRLEFITTTPVIAASVMHGSNQISRDAVVQSLKELAGKP 568
            LNLALPK KSA DAKSESE+IIKQTQAIIRNQ AKR VFY AQEIELV+PMVEAVGW LLATFSVTMEEGEN+PRV LCMEGF+AGIHITYVLGMDTMRYAFLTSLVRFTFLHAPK+MRSKNVEALRTLLGLCD EPDSLQDTWNAVLECVSRLEFIT+TP IAA+VMHGSNQIS+DAVVQSLKELAGKP
Sbjct:  805 LNLALPKTKSATDAKSESEAIIKQTQAIIRNQEAKRGVFYIAQEIELVRPMVEAVGWPLLATFSVTMEEGENKPRVVLCMEGFRAGIHITYVLGMDTMRYAFLTSLVRFTFLHAPKEMRSKNVEALRTLLGLCDLEPDSLQDTWNAVLECVSRLEFITSTPAIAATVMHGSNQISKDAVVQSLKELAGKP 994
[Close]
BLAST of g.arboreum_cottongen_reftransV1_0018080 vs. ExPASy TrEMBL
Match: W9SKB4_9ROSA (Brefeldin A-inhibited guanine nucleotide-exchange protein 1 OS=Morus notabilis GN=L484_019576 PE=4 SV=1)

HSP 1 Score: 343.584 bits (880), Expect = 1.122e-105
Identity = 162/190 (85.26%), Postives = 178/190 (93.68%), Query Frame = -2 
Query:    2 LNLALPKQKSAVDAKSESESIIKQTQAIIRNQGAKR-VFYTAQEIELVKPMVEAVGWSLLATFSVTMEEGENRPRVALCMEGFKAGIHITYVLGMDTMRYAFLTSLVRFTFLHAPKDMRSKNVEALRTLLGLCDSEPDSLQDTWNAVLECVSRLEFITTTPVIAASVMHGSNQISRDAVVQSLKELAGKP 568
            LNLALPK++S  D K+ESE+IIKQTQ I RNQG KR VFYT+Q+IELV+PMVEAVGW LLATFSVTMEEG+N+ RVALCMEGF+AGIHIT+VLGMDTMRYAFLTSLVRFTFLHAPK+MRSKNVEALRTLL LCDSE DSLQDTWNA+LECVSRLEFIT+TP IAA+VMHGSNQISRDAV+QSLKELAGKP
Sbjct:  794 LNLALPKRQSTTDTKAESEAIIKQTQTIFRNQGTKRGVFYTSQQIELVRPMVEAVGWPLLATFSVTMEEGDNKARVALCMEGFRAGIHITHVLGMDTMRYAFLTSLVRFTFLHAPKEMRSKNVEALRTLLALCDSETDSLQDTWNAILECVSRLEFITSTPAIAATVMHGSNQISRDAVLQSLKELAGKP 983
[Close]
BLAST of g.arboreum_cottongen_reftransV1_0018080 vs. ExPASy TrEMBL
Match: F6HGY7_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_11s0016g00170 PE=4 SV=1)

HSP 1 Score: 343.584 bits (880), Expect = 1.491e-105
Identity = 162/190 (85.26%), Postives = 180/190 (94.74%), Query Frame = -2 
Query:    2 LNLALPKQKSAVDAKSESESIIKQTQAIIRNQGAKR-VFYTAQEIELVKPMVEAVGWSLLATFSVTMEEGENRPRVALCMEGFKAGIHITYVLGMDTMRYAFLTSLVRFTFLHAPKDMRSKNVEALRTLLGLCDSEPDSLQDTWNAVLECVSRLEFITTTPVIAASVMHGSNQISRDAVVQSLKELAGKP 568
            LNLALPK+KS+VD KSESE+IIKQTQAI RNQGAKR VFYT+Q+IELV+PMVEAVGW LLATFSVTMEEG+N+PRV LCMEGF+AGIHIT+V+GMDTMRYAFLTSLVRFTFLHAPK+MRSKNVEALRTLL LCDSE +SLQDTWNAVLECVSRLEFIT+TP IAA+VM  SNQISRDA++QSL+ELAGKP
Sbjct:  806 LNLALPKRKSSVDTKSESEAIIKQTQAIFRNQGAKRGVFYTSQQIELVRPMVEAVGWPLLATFSVTMEEGDNKPRVLLCMEGFRAGIHITHVIGMDTMRYAFLTSLVRFTFLHAPKEMRSKNVEALRTLLALCDSETNSLQDTWNAVLECVSRLEFITSTPAIAATVMQASNQISRDAILQSLRELAGKP 995
[Close]
BLAST of g.arboreum_cottongen_reftransV1_0018080 vs. ExPASy Swiss-Prot
Match: BIG1_RAT (Brefeldin A-inhibited guanine nucleotide-exchange protein 1 OS=Rattus norvegicus GN=Arfgef1 PE=1 SV=1)

HSP 1 Score: 78.9518 bits (193), Expect = 1.766e-15
Identity = 36/121 (29.75%), Postives = 71/121 (58.68%), Query Frame = -2 
Query:  104 FYTAQEIELVKPMVEAVGWSLLATFSVTMEEGENRPRVALCMEGFKAGIHITYVLGMDTMRYAFLTSLVRFTFLHAPK---DMRSKNVEALRTLLGLCDSEPDSLQDTWNAVLECVSRLEF 457
            F +A  +E V+PM +      LA FSV +++ ++    +LC+EG +  I I  +  +   R A++ +L RFT L       +M+ KN++ ++TL+ +  ++ + L ++W+ +L+C+S+LE 
Sbjct:  933 FTSATHLEHVRPMFKLAWTPFLAAFSVGLQDCDDTDVASLCLEGIRCAIRIACIFSIQLERDAYVQALARFTLLTVSSGITEMKQKNIDTIKTLITVAHTDGNYLGNSWHEILKCISQLEL 1053
[Close]
BLAST of g.arboreum_cottongen_reftransV1_0018080 vs. ExPASy Swiss-Prot
Match: BIG1_MOUSE (Brefeldin A-inhibited guanine nucleotide-exchange protein 1 OS=Mus musculus GN=Arfgef1 PE=2 SV=1)

HSP 1 Score: 78.9518 bits (193), Expect = 1.900e-15
Identity = 36/121 (29.75%), Postives = 71/121 (58.68%), Query Frame = -2 
Query:  104 FYTAQEIELVKPMVEAVGWSLLATFSVTMEEGENRPRVALCMEGFKAGIHITYVLGMDTMRYAFLTSLVRFTFLHAPK---DMRSKNVEALRTLLGLCDSEPDSLQDTWNAVLECVSRLEF 457
            F +A  +E V+PM +      LA FSV +++ ++    +LC+EG +  I I  +  +   R A++ +L RFT L       +M+ KN++ ++TL+ +  ++ + L ++W+ +L+C+S+LE 
Sbjct:  933 FTSATHLEHVRPMFKLAWTPFLAAFSVGLQDCDDTEVASLCLEGIRCAIRIACIFSIQLERDAYVQALARFTLLTVSSGITEMKQKNIDTIKTLITVAHTDGNYLGNSWHEILKCISQLEL 1053
[Close]
BLAST of g.arboreum_cottongen_reftransV1_0018080 vs. ExPASy Swiss-Prot
Match: BIG1_HUMAN (Brefeldin A-inhibited guanine nucleotide-exchange protein 1 OS=Homo sapiens GN=ARFGEF1 PE=1 SV=2)

HSP 1 Score: 78.9518 bits (193), Expect = 1.900e-15
Identity = 36/121 (29.75%), Postives = 71/121 (58.68%), Query Frame = -2 
Query:  104 FYTAQEIELVKPMVEAVGWSLLATFSVTMEEGENRPRVALCMEGFKAGIHITYVLGMDTMRYAFLTSLVRFTFLHAPK---DMRSKNVEALRTLLGLCDSEPDSLQDTWNAVLECVSRLEF 457
            F +A  +E V+PM +      LA FSV +++ ++    +LC+EG +  I I  +  +   R A++ +L RFT L       +M+ KN++ ++TL+ +  ++ + L ++W+ +L+C+S+LE 
Sbjct:  936 FTSATHLEHVRPMFKLAWTPFLAAFSVGLQDCDDTEVASLCLEGIRCAIRIACIFSIQLERDAYVQALARFTLLTVSSGITEMKQKNIDTIKTLITVAHTDGNYLGNSWHEILKCISQLEL 1056
[Close]
BLAST of g.arboreum_cottongen_reftransV1_0018080 vs. ExPASy Swiss-Prot
Match: BIG1_BOVIN (Brefeldin A-inhibited guanine nucleotide-exchange protein 1 OS=Bos taurus GN=ARFGEF1 PE=1 SV=1)

HSP 1 Score: 78.9518 bits (193), Expect = 1.971e-15
Identity = 36/121 (29.75%), Postives = 71/121 (58.68%), Query Frame = -2 
Query:  104 FYTAQEIELVKPMVEAVGWSLLATFSVTMEEGENRPRVALCMEGFKAGIHITYVLGMDTMRYAFLTSLVRFTFLHAPK---DMRSKNVEALRTLLGLCDSEPDSLQDTWNAVLECVSRLEF 457
            F +A  +E V+PM +      LA FSV +++ ++    +LC+EG +  I I  +  +   R A++ +L RFT L       +M+ KN++ ++TL+ +  ++ + L ++W+ +L+C+S+LE 
Sbjct:  936 FTSATHLEHVRPMFKLAWTPFLAAFSVGLQDCDDTEVASLCLEGIRCAIRIACIFSIQLERDAYVQALARFTLLTVSSGITEMKQKNIDTIKTLITVAHTDGNYLGNSWHEILKCISQLEL 1056
[Close]
BLAST of g.arboreum_cottongen_reftransV1_0018080 vs. ExPASy Swiss-Prot
Match: SEC7_YEAST (Protein transport protein SEC7 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=SEC7 PE=1 SV=2)

HSP 1 Score: 70.8626 bits (172), Expect = 7.258e-13
Identity = 38/125 (30.40%), Postives = 68/125 (54.40%), Query Frame = -2 
Query:  107 RNQGAKRVFYTAQEIELVKPMVEAVGWSLLATFSVTMEEGENRPRVALCMEGFKAGIHITYVLGMDTMRYAFLTSLVRFTFLHAPKDMRSKNVEALRTLLGLCDSEPDSLQDTWNAVLECVSRLE 481
            +N+G   V+Y A  +E VK + E +  S LA  +   ++ ++      C+EG K  I I     ++  R +F+ +LV+F  L   ++++ KNV A+  LL +  SE + L+ +W  +L  VS++E
Sbjct: 1068 KNKGGPDVYYAASHVEHVKSIFETLWMSFLAALTPPFKDYDDIDTTNKCLEGLKISIKIASTFRINDARTSFVGALVQFCNLQNLEEIKVKNVNAMVILLEVALSEGNYLEGSWKDILLVVSQME 1192
The following BLAST results are available for this feature:
BLAST of g.arboreum_cottongen_reftransV1_0018080 vs. ExPASy TrEMBL
Analysis Date: 2016-11-15 (Homology Analysis for Gossypium arboreum CottonGen RefTrans V1 vs TrEMBL)
Total hits: 25
Match NameE-valueIdentityDescription
A0A0B0NVS2_GOSAR1.477e-123100.00Brefeldin A-inhibited guanine nucleotide-exchange ... [more]
A0A0D2PTI8_GOSRA2.018e-12399.47Uncharacterized protein OS=Gossypium raimondii GN=... [more]
A0A0D2PKJ0_GOSRA2.789e-12399.47Uncharacterized protein OS=Gossypium raimondii GN=... [more]
A0A0D2QJD9_GOSRA3.076e-12399.47Uncharacterized protein OS=Gossypium raimondii GN=... [more]
A0A0D2N4G4_GOSRA4.675e-12399.47Uncharacterized protein OS=Gossypium raimondii GN=... [more]
A0A067G2C5_CITSI2.590e-11386.32Uncharacterized protein (Fragment) OS=Citrus sinen... [more]
A0A061GLV9_THECC5.296e-11291.05HOPM interactor 7 isoform 3 (Fragment) OS=Theobrom... [more]
A0A061GKQ1_THECC2.278e-11191.05HOPM interactor 7 isoform 1 OS=Theobroma cacao GN=... [more]
W9SKB4_9ROSA1.122e-10585.26Brefeldin A-inhibited guanine nucleotide-exchange ... [more]
F6HGY7_VITVI1.491e-10585.26Putative uncharacterized protein OS=Vitis vinifera... [more]

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BLAST of g.arboreum_cottongen_reftransV1_0018080 vs. ExPASy Swiss-Prot
Analysis Date: 2016-11-15 (Homology Analysis for Gossypium arboreum CottonGen RefTrans V1 vs SwissProt)
Total hits: 15
Match NameE-valueIdentityDescription
BIG1_RAT1.766e-1529.75Brefeldin A-inhibited guanine nucleotide-exchange ... [more]
BIG1_MOUSE1.900e-1529.75Brefeldin A-inhibited guanine nucleotide-exchange ... [more]
BIG1_HUMAN1.900e-1529.75Brefeldin A-inhibited guanine nucleotide-exchange ... [more]
BIG1_BOVIN1.971e-1529.75Brefeldin A-inhibited guanine nucleotide-exchange ... [more]
SEC7_YEAST7.258e-1330.40Protein transport protein SEC7 OS=Saccharomyces ce... [more]

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InterPro
Analysis Name: InterProScan analysis for Gossypium arboreum CottonGen RefTrans V1
Date Performed: 2016-11-14
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR10663:SF189SH3 DOMAIN-CONTAINING PROTEINcoord: 10..56
coord: 138..187
NoneNo IPR availablePANTHERPTHR10663GUANYL-NUCLEOTIDE EXCHANGE FACTORcoord: 10..56
coord: 138..187

Sequences
The following sequences are available for this feature:

contig sequence

>g.arboreum_cottongen_reftransV1_0018080 ID=g.arboreum_cottongen_reftransV1_0018080; Name=g.arboreum_cottongen_reftransV1_0018080; organism=Gossypium arboreum; type=contig; length=569bp
CAGGTTTCCCAGCCAACTCTTTCAGTGACTGCACAACAGCATCCCTGGAG
ATCTGATTTGATCCATGCATGACACTTGCAGCAATAACAGGAGTTGTTGT
TATAAATTCAAGCCGAGAAACACATTCAAGAACAGCATTCCATGTGTCTT
GAAGAGAATCTGGTTCTGAGTCACATAAACCCAATAGAGTCCGCAATGCT
TCCACATTTTTACTACGCATATCCTTTGGGGCATGCAAGAAAGTAAACCT
GACTAGAGATGTTAAAAAGGCATAGCGCATTGTATCCATTCCGAGGACAT
ATGTGATATGTATCCCAGCTTTAAATCCTTCCATACAAAGAGCAACCCTC
GGCCTATTTTCACCTTCCTCCATTGTAACAGAGAAGGTAGCCAGCAATGA
CCATCCTACAGCTTCAACCATGGGTTTAACAAGTTCAATCTCTTGTGCAG
TGTAAAAAACTCTTTTTGCTCCTTGGTTTCGGATGATAGCCTGTGTCTGC
TTAATTATTGATTCACTTTCAGACTTAGCATCAACTGCTGATTTTTGTTT
AGGTAGAGCCAGATTAAGG
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