g.arboreum_cottongen_reftransV1_0005846, g.arboreum_cottongen_reftransV1_0005846 (contig) Gossypium arboreum

Overview
Nameg.arboreum_cottongen_reftransV1_0005846
Unique Nameg.arboreum_cottongen_reftransV1_0005846
Typecontig
OrganismGossypium arboreum (Tree cotton)
Sequence length2091
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Chr4chromosomeg.arboreum_cottongen_reftransV1_0005846:1..2091 .
Chr4:64486991..64490876 +
Homology
BLAST of g.arboreum_cottongen_reftransV1_0005846 vs. ExPASy TrEMBL
Match: V7AN32_PHAVU (Uncharacterized protein OS=Phaseolus vulgaris GN=PHAVU_010G098800g PE=4 SV=1)

HSP 1 Score: 449.129 bits (1154), Expect = 1.627e-145
Identity = 326/618 (52.75%), Postives = 407/618 (65.86%), Query Frame = 1
Query:  112 ASSLKEYLXXXXXXXXXXXXXXXXXXXXXXXXXSSGVLVVDEDPVWQKPVNLEEDEGNDSPDE-KPLVDEDIEVKRMKRLEQIRLRRGYNAIAEDGSGWVSLSPKHANTVDPNSDISPPRR----------QRTRNDTPSPEPGLRHSNSEIEAKDLSPPRKPRSPGLKSDLSPPRRS-------RAHNET------TLTXXXXXXXXXXXXXXXXXXXXXXLKASRGGTDLSPPWKRRVRNGTPSPEPLVNRADGTDLSPPRKHRVRNDTPSPEPLVNRTDGTDLSPPRKRRVRNDTPSPEPLANR-AGADLSPPRKRRARNDTPSPKRRVKPLREGADSDMSPPQ--QRSRRRHTQSPEPDMSPPRQSHAQTSELVHDSDLSPPRKSRRESTGPASLKQQSKTGLISGSDIREEISKTKKDDWLRFKEMDPSVSGRGAEPVFRDKTKGERISKEEYLXXXXXXXXXXXXXXXXXXXXXLAQKREAETRLQELELEKSKPFARTRDDPELDNMLKDRLRWGDPMAHLVKKKQPELVLKDLGDAERMKESGFVVPQDIPPHSWIVRKLDAAPNRYGIRPGRHWDGVDRSNGFEKKMFTKLNEKRATEREAYLWSVSDM 1884
            ++SLK+YLKRYET   EE++K K+K+KKK++P+++G+LVVDEDP WQKP++LEE+  ++S DE KP VDEDI+VKRMKRLEQ+R RR Y+AI+EDGSGWVSLS    N +D N+DISPPR+          Q  RNDTPSP+    +  S+++  D+SPPR+ R        SPPRR        R H+++        +               A +    +   R   D SPP  RR ++   +       +D  D+SPPR  R R+D+PS + ++  +   DLSPPRK + +N   S    +NR +  DLSPPR    R+D+PS       L     SD+SPP+  Q++  R   S       P  S    S    D DL+PPRK+ +ES+ PAS     KTGLISG DIR+EI K K DD LRF +MDPS+SGRGAEPV+RDK KG RISKEEYLKSK+K  E+  + +       LAQKREAE RL+ELELEK KPFARTRDDPELD MLK+RLRWGDPMAHLVKKK PE VL +LG+ E+MKESGFVVPQDIP HSW+ R LDAA NRYGIRPGRHWDGVDRSNGFEK MF + NE++A +REAYLWSVSDM
Sbjct:    3 SNSLKDYLKRYETNTVEEKKKTKKKQKKKSQPQTTGLLVVDEDPTWQKPIDLEEENNDNSSDEEKPQVDEDIDVKRMKRLEQLRARRPYHAISEDGSGWVSLSSNPENYIDSNNDISPPRKRKGADLSPGQQLKRNDTPSPD----YRTSDLQ--DISPPRRGRHD------SPPRRGHHDSPPRRGHHDSPPQDALHGSVASDLSPRRKILKNAARTGLRDISHGRSPKDFSPP--RRDQHDYET-------SDLQDISPPR--RSRHDSPS-QDVMRGSVAPDLSPPRKIQ-KNVARSGFSYSNRRSPQDLSPPR--HGRHDSPS----QDALHGSVVSDLSPPRKIQKNVGRLGSSDLSRHHSPSISVKVGSHPSLDPDLAPPRKNTKESSNPAS-----KTGLISGKDIRDEIDKKKSDDMLRFNKMDPSISGRGAEPVYRDKIKGVRISKEEYLKSKQKVEEKPKEIEIEWGKG-LAQKREAEARLKELELEKEKPFARTRDDPELDKMLKERLRWGDPMAHLVKKKYPEPVLPNLGENEKMKESGFVVPQDIPNHSWLKRGLDAASNRYGIRPGRHWDGVDRSNGFEKDMFKRTNERQARDREAYLWSVSDM 583          
BLAST of g.arboreum_cottongen_reftransV1_0005846 vs. ExPASy TrEMBL
Match: M4EYH8_BRARP (Uncharacterized protein OS=Brassica rapa subsp. pekinensis GN=Bra033870 PE=4 SV=1)

HSP 1 Score: 447.973 bits (1151), Expect = 1.731e-145
Identity = 308/580 (53.10%), Postives = 375/580 (64.66%), Query Frame = 1
Query:  214 SGVLVVDEDPVWQKPVN-LEEDEGNDSPDEKPLVDEDIEVKRMKRLEQIRLRRGYNAIAEDGSGWVSLSPKHANTVDP--NSDISPPRRQRTRNDTPSPEPGLRHSNSEIEAKDLSPPRKPR-----SP----------GLKSDLSPPRRSRAHNETTLTXXXXXXXXXXXXXXXXXXXXXXLKASRGGTDLSPPWKRRVRNGTPSPEPLVNRADGTDLSPPRKHRVRNDTPSPEPLVNRTDGT----DLSPPRKRRVRNDTPSPEPLANRAGADLSPPRKRRARNDTPSPKRR-VKPLREGADSDMSPPQQRSRRRHTQSPEPDMSPPRQSHAQTSELVHDSDLSPPRKSRRESTGPASLKQQSKTGLISGSDIREEISKTKKDDWLRFKEMDPSVSGRGAEPVFRDKTKGERISKEEYLXXXXXXXXXXXXXXXXXXXXXLAQKREAETRLQELELEKSKPFARTRDDPELDNMLKDRLRWGDPMAHLVKKKQPELVLKDLGDAERMKESGFVVPQDIPPHSWIVRKLDAAPNRYGIRPGRHWDGVDRSNGFEKKMFTKLNEKRATEREAYLWSVSDM 1884
            +GVLVVDEDPVWQK V+  EED  N S +E+P+VDEDIEVKRM+RLE+I+ RR  NAIAEDGSGWVSLS       DP  + DISPPRR RTRND+PSPEPG   S   +   D+SPPR+ +     SP           L SDL+PPR+ RA N++                                              +P PE    ++ G DLSPPRK RV     SPE    R+D      DLSPPR+++      S     N+   DLSPPR+RR  + +P P RR  K L  G++SD+SPP++    + ++  + D+SP R+  +++S      D SPPR+ RRES  P + K+Q KTGLISG DI  E  K K+D+ LRFK MD  ++G+ AE VFRDK  G+RISKEEYL+SK+K   EKPKE +LEWG+GLAQKR+AE RLQELELEK KPFARTRDDPELD M+K+R+RWGDPMAHLVKKKQ E  L DLGD E MK+SGFV+PQ IP HSWI R L+AAPNRYGI+PGRHWDGVDRS G EK  F K +EK+ATE EAYLWSV+DM
Sbjct:   37 TGVLVVDEDPVWQKQVDPHEEDNENYSAEERPVVDEDIEVKRMRRLEEIKARRAQNAIAEDGSGWVSLS------SDPQRSDDISPPRRHRTRNDSPSPEPG--GSRGSLPETDMSPPRRRKRHYTPSPEPNRLHAKPVSLDSDLTPPRKRRARNDSP---------------------------------------------SPEPEDPAPKSLGEDLSPPRKRRVH--PVSPERSRKRSDSLELDGDLSPPRRKK-----DSLVSDVNKRSNDLSPPRRRRYHSPSPEPGRRPSKSL--GSNSDLSPPRRSVSVKGSR--DSDLSPQRKPVSRSSNF----DSSPPRRPRRESPPPQTSKEQRKTGLISGKDIGSEYRKKKQDEQLRFKNMDSELTGQNAEAVFRDKITGKRISKEEYLQSKQKKVIEKPKEIKLEWGQGLAQKRDAEARLQELELEKDKPFARTRDDPELDQMMKERVRWGDPMAHLVKKKQYEAPLMDLGDNEEMKKSGFVIPQSIPKHSWITRGLEAAPNRYGIKPGRHWDGVDRSTGHEKDRFKKTSEKKATESEAYLWSVADM 548          
BLAST of g.arboreum_cottongen_reftransV1_0005846 vs. ExPASy TrEMBL
Match: A0A0A0LTH5_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G428990 PE=4 SV=1)

HSP 1 Score: 441.81 bits (1135), Expect = 5.225e-143
Identity = 291/563 (51.69%), Postives = 361/563 (64.12%), Query Frame = 1
Query:  217 GVLVVDEDPVWQKPVNLEEDEGNDSPDEKPLVDEDIEVKRMKRLEQIRLRRGYNAIAEDGSGWVSLSPKHANTVDPNSDISPPRRQRTRNDTPSPEPGLRHSNSEIEAKDL---SPPRKPRSPGLKSDLSPPRRSRAHNETTLTXXXXXXXXXXXXXXXXXXXXXXLKASRGGTDLSPPWKRRVRNGTPSPEPLVNRADGT----DLSPPRKHRVRNDTPSPEPLVNRTDGTDLSPPRKRRVRNDTPSPEPLANRAGADLSPPRKRRARNDTPSPKRRVKPLREGADSDMSPPQQRSRRRHTQSPEPDMSPPRQSHAQTSELVHDSDLSPPRKSRRESTGPASLKQQSKTGLISGSDIREEISKTKKDDWLRFKEMDPSVSGRGAEPVFRDKTKGERISKEEYLXXXXXXXXXXXXXXXXXXXXXLAQKREAETRLQELELEKSKPFARTRDDPELDNMLKDRLRWGDPMAHLVKKKQPELVLKDLGDAERMKESGFVVPQDIPPHSWIVRKLDAAPNRYGIRPGRHWDGVDRSNGFEKKMFTKLNEKRATEREAYLWSVSDM 1884
            GVLVVDEDPVWQKP+ +EED  ++S DE+P VDED+EVKRM+RLE+++ +R YN+I+EDGSGWVSLSP  AN+   NSD+SPPRR R RNDTPSP   L+      E +D        +     L+ D  P       N T  +   +      R     G+    +  ++   DLSPP +RR R  TPSPEP            D+SPPR    R+D  + +  +      DLSPPR+R   +D    E ++   G+DLSPPRK+R            K +R     D S   ++SR                +H   +     +DLSPPRK ++E     S KQ  KTGL++  +  EE+SKT K+DW RFKEM+PS S   A+PV+RDK KG+RISKEE+L   R   EEK KE +LEWGKGLAQKREAE  L ELELEK +PFAR+R+D ELD ML+DRLRWGDPMAHLVKK+Q E+ L DLGD E+MKESGF++PQDIPPHSW+ R LDAAPNRYGIRPGRHWDGVDRSNGFEK+MF ++NEK+ATEREAYLWSVSDM
Sbjct:   42 GVLVVDEDPVWQKPIIIEEDNADNSTDEEPQVDEDVEVKRMRRLEELKAKRPYNSISEDGSGWVSLSPNRANSSMVNSDMSPPRRTRVRNDTPSPSNELKPPVPGEEGEDFSPPRRRPRKPPSSLEHDEKPT------NSTYPSSSPTQKDKVYRDAHLQGANSWHIDYAQEDIDLSPPRQRRKRYHTPSPEPDATCTRSVSPQFDISPPR----RSDRKASKTSLGGNHKVDLSPPRRR--ASDYVGDERISR--GSDLSPPRKQR------------KDVR----GDRSLLDKQSR----------------NHVTDASQESPTDLSPPRKKQKELPVSVSFKQTRKTGLLTQQEFGEEMSKTNKEDWTRFKEMNPSASS-NADPVYRDKIKGDRISKEEFL-KARGKIEEKAKEIKLEWGKGLAQKREAEAELMELELEKDRPFARSRNDAELDTMLRDRLRWGDPMAHLVKKRQSEMALPDLGDNEKMKESGFMIPQDIPPHSWLKRGLDAAPNRYGIRPGRHWDGVDRSNGFEKQMFKRMNEKQATEREAYLWSVSDM 556          
BLAST of g.arboreum_cottongen_reftransV1_0005846 vs. ExPASy TrEMBL
Match: M0U661_MUSAM (Uncharacterized protein OS=Musa acuminata subsp. malaccensis PE=4 SV=1)

HSP 1 Score: 423.705 bits (1088), Expect = 3.374e-136
Identity = 285/567 (50.26%), Postives = 361/567 (63.67%), Query Frame = 1
Query:  217 GVLVVDEDPVWQKPVNLEEDEGNDSPDEKPLVDEDIEVKRMKRLEQIRLRRGYNAIAEDGSGWVSLS--PKHANTVDPNSDISPPRRQRTRNDTPSPEPGLRHSNSEIEAKDLSPPRKPRSPGLKSDLSPPRRSRAHNETTLTXXXXXXXXXXXXXXXXXXXXXXLKASRGGTDLSPPWKRRVRNGTPSPEPLVNRADGTDLSPPRKHRVRNDTPSPEPLVNRTDGTDLSPPRKRRVRNDTPSPEPLANRAGADLSPPRKRRARNDTPSPKRRVKPL----REGADSDMSPPQQRSRRRHTQSPEPDMSPPRQSHAQTSELVHD-----SDLSPPRKSRRESTGPASLKQQSKTGLISGSDIREEISKTKKDDWLRFKEMDPSVSGRGAEPVFRDKTKGERISKEEYLXXXXXXXXXXXXXXXXXXXXXLAQKREAETRLQELELEKSKPFARTRDDPELDNMLKDRLRWGDPMAHLVKKKQPELVLKDLGDAERMKESGFVVPQDIPPHSWIVRKLDAAPNRYGIRPGRHWDGVDRSNGFEKKMFTKLNEKRATEREAYLWSVSDM 1884
            G+LVVDEDPVWQKPV +E++E   S DEKP ++EDIEVKRMKRL+ IR R+ Y+AI+EDGSGWVS+S   K + +     DI PPR+ R R DTPSPEP  + S S+                  SDLSPPR+ RA   +                        +  A  G  D+SPPW+R   + +P        +   DLSPPR+ + ++ +  P+    + D  DLSPPR RR R  +P           D+S PR+           RR+ P     R   D+D+SPP     R+ ++    D+SPPR+ H Q+ E +       +DLSPPRKSR+E+    S K+  + GL S  +I+EEI K KK+D  RF  MDP +SGRGAEPVFRDK +G+RISKEE L   +   +EKPKEK+LEWGKGLAQKREAE   +ELELE+ KPFARTRDDPELD MLK+R+RWGDPMAH+VK+K  +L+L+DLGD E+MKESGF++PQ IP HSW+ R +D  PNRYG +PGRHWDGVDRSNGFEK++F + NEKRATEREAYLWSVSDM
Sbjct:   47 GILVVDEDPVWQKPVQIEQEESEPSGDEKPQIEEDIEVKRMKRLDAIRARKPYHAISEDGSGWVSISDPSKTSKSAAIGRDICPPRQGRARFDTPSPEPKEKPSGSQ-----------------NSDLSPPRQRRADTPSP--------------------EPEKAVAGDGTADISPPWRRSRDDNSPPRRTRRAHSPVPDLSPPRRSQ-KDLSDDPKVSSRQQDPVDLSPPR-RRQRVSSP-----------DISLPRR----------TRRLSPGAGGPRASDDADLSPP-----RKSSKCLSDDLSPPRRIHPQSPEAIRRQSSPVADLSPPRKSRKEA---PSAKESRRAGLFSAKEIKEEIEKKKKEDTSRFASMDPFLSGRGAEPVFRDK-EGKRISKEEML---KTQEKEKPKEKKLEWGKGLAQKREAEANAKELELEREKPFARTRDDPELDKMLKERIRWGDPMAHVVKRKSSDLILEDLGDNEKMKESGFIIPQTIPSHSWLKRGIDFPPNRYGTKPGRHWDGVDRSNGFEKELFKRQNEKRATEREAYLWSVSDM 541          
BLAST of g.arboreum_cottongen_reftransV1_0005846 vs. ExPASy TrEMBL
Match: J3MQV4_ORYBR (Uncharacterized protein OS=Oryza brachyantha GN=OB08G14830 PE=4 SV=1)

HSP 1 Score: 423.705 bits (1088), Expect = 9.333e-136
Identity = 296/589 (50.25%), Postives = 366/589 (62.14%), Query Frame = 1
Query:  220 VLVVDEDPVWQKPVNLEEDEGNDSPDEKPLVDEDIEVKRMKRLEQIRLRRGYNAIAEDGSGWVSLSPKHANTVDPNS------------------DISPPRRQRTRNDTPSPEPGLRHSNSEIEAKDLSPPRKPR------SP-----GLKSDLSPPRRSRAHNETTLTXXXXXXXXXXXXXXXXXXXXXXLKASRGGTDLSPPWKRRVRNGTPSPEPLVNRADGTDLSPPRKHRVRNDTPSPEPLVNRTDGTDLSPPRKRRVRNDTPSPEPLANRAGADLSPPRKRRARNDTPSPKRRVKPLREG-ADS----DMSPPQQRSRRRHTQSPEPDMSPPRQSHAQTSELVHDSDLSPPRKSRRESTGPASLKQQSKTGLISGSDIREEISKTKKDDWLRFKEMDPSVSGRGAEPVFRDKTKGERISKEEYLXXXXXXXXXXXXXXXXXXXXXLAQKREAETRLQELELEKSKPFARTRDDPELDNMLKDRLRWGDPMAHLVKKKQPELVLKDLGDAERMKESGFVVPQDIPPHSWIVRKLDAAPNRYGIRPGRHWDGVDRSNGFEKKMFTKLNEKRATEREAYLWSVSDM 1884
            VL+VDEDP WQKPV +EE E   S DEKPLVDEDIEVKRM+RLE IR  R YNAIAEDGSGWV+++       +PN                   D+SPPRR R R DTPSP+P       +   KDLSPPR+ R      SP       + DLSPPR+SR   +++  R  +                     S    DLSPP +RR R+ +  P+         DLSPPR+ RVR+D+  P+         DLSPPR RRVR+D+  P+        DLSPPR RR R+D+  PK    P R    DS    D+SPP    RR    S EP    PRQ      + + D D+SPPRKS++E       K   + GL++  +++E+I K K+D+ L+F   DPS+ G+GA+ VFRDK +G+RIS+E+    K+   + KPKE  +EWGKGL QKREAE RL ELE EKSKPFARTRDDPELD MLK+R+RWGDPMAHLVK+   +L+L+DLGD E+MKESGF+VPQ+IP HSW+ R +D  PNRYGI+PGRHWDGVDRSNGFEK MF   NEK+ATE+EAYLWSVSDM
Sbjct:   53 VLIVDEDPTWQKPVQIEE-EPPSSGDEKPLVDEDIEVKRMRRLEAIRAARPYNAIAEDGSGWVTVAAPEEPNEEPNGCRRRNDTPSPERGGAGRKDLSPPRR-RQRQDTPSPDP------RDAVGKDLSPPRQRRKRQDTPSPKGNEIAAQDDLSPPRKSRQQQDSSPPRRLARHD------------------SEDPQDLSPP-RRRTRHDSEEPQ---------DLSPPRR-RVRHDSEEPK---------DLSPPR-RRVRHDSEEPK--------DLSPPR-RRTRHDSEEPKDLSPPRRRTRHDSEEPKDLSPP---CRRMRHGSHEPKDKLPRQKRQSLDKSLDDGDISPPRKSKKE----VPPKDVRRAGLMTAEEVKEDIRKIKEDERLKFAAQDPSMIGKGAKAVFRDK-QGKRISEEDM---KKAKEDTKPKEIHIEWGKGLVQKREAEARLHELEAEKSKPFARTRDDPELDTMLKNRIRWGDPMAHLVKRNDTDLLLEDLGDNEKMKESGFIVPQNIPSHSWLKRGVDPPPNRYGIKPGRHWDGVDRSNGFEKDMFKLKNEKQATEQEAYLWSVSDM 574          
BLAST of g.arboreum_cottongen_reftransV1_0005846 vs. ExPASy Swiss-Prot
Match: BUD13_HUMAN (BUD13 homolog OS=Homo sapiens GN=BUD13 PE=1 SV=1)

HSP 1 Score: 152.14 bits (383), Expect = 1.486e-37
Identity = 177/541 (32.72%), Postives = 250/541 (46.21%), Query Frame = 1
Query:  451 DISPPRRQRTRNDTPSPEP--GLRHSNSEIEAKDLSPPRKPRSPGLKSDLSPPRRSRAHNETTLTXXXXXXXXXXXXXXXXXXXXXXLKASRGGTDLSPPWKRRVRNGTPSPEP-LVNRADGTDLSPPRKHRVRNDTPSPEPLVNRTDGTDLSPPRKRRVRNDTP-----------------SPE-------PLANRAGA---------------DLSPPRKRRARN--------------------DTPSPKRRVKPLREGADSDMSPPQQRSRRRHTQSPEPDMSPPRQSHAQTSELVHDSDLSPPRKSRRESTGPASLKQQSKTGLISGSDIREEISKTKKDDWLRFKEMDPSVSGRGAEPVFRDKTKGERISKEEYLXXXXXXXXXXXXXXXXXX-XXXLAQKREAETRLQELELEKSKPFARTRDDPELDNMLKDRLRWGDPMAHLVKKKQPELVLKDLGDAERMKESGFVVPQDIPPHSWIVRKLDAAPNRYGIRPGRHWDGVDRSNGFEKKMFTKLNEKRATEREAYLWSVSDM 1884
            D   P  +R R+DTP P P  G RH +      D SPPR+ R     SD SPPRR+R  +                            +     +  SP   RRVR+ +P P P    R   +D+S PR  RV N++P       RT G+  +  + RR R+D+P                 +PE       P    +GA               D+SPPRK++A++                    D  SP+ +  P  + +DSD+SPP+ R R R + S   D+SPPR+     S    DSDLSPPR+S+      A +   +KTGL+  +DI+ E  + K+ D    + M      + AE VFRDK+  +R  K E L+ +RK  ++  +++     GKGLAQ R+ +  +++   E  KP AR  DD +LD ML+++ R GDPMA+ +KK + +          R + SG   P                PNR+ I PG  WDGVDRSNGFE+K F +L  K+A E  AY WSV DM
Sbjct:  146 DTPDPSPRRARHDTPDPSPLRGARHDS------DTSPPRRIRHDS--SDTSPPRRARHDSPDPSPPR---------------------RPQHNSSGASP---RRVRHDSPDPSPPRRARHGSSDISSPR--RVHNNSPD---TSRRTLGSSDTQ-QLRRARHDSPDLAPNVTYSLPRTKSGKAPERASSKTSPHWKESGASHLSFPKNSKYEYDPDISPPRKKQAKSHFGDKKQLDSKGDCQKATDSDLSSPRHKQSPGHQDSDSDLSPPRNRPRHRSSDS---DLSPPRRRQRTKSS---DSDLSPPRRSQPPGKKAAHMYSGAKTGLVL-TDIQREQQELKEQDQ---ETMAFEAEFQYAETVFRDKSGRKRNLKLERLEQRRKAEKDSERDELYAQWGKGLAQSRQQQQNVEDAMKEMQKPLARYIDDEDLDRMLREQEREGDPMANFIKKNKAKENKNK---KVRPRYSGPAPP----------------PNRFNIWPGYRWDGVDRSNGFEQKRFARLASKKAVEELAYKWSVEDM 619          
BLAST of g.arboreum_cottongen_reftransV1_0005846 vs. ExPASy Swiss-Prot
Match: BUD13_CAEEL (BUD13 homolog OS=Caenorhabditis elegans GN=R08D7.1 PE=3 SV=1)

HSP 1 Score: 143.665 bits (361), Expect = 2.132e-35
Identity = 144/388 (37.11%), Postives = 201/388 (51.80%), Query Frame = 1
Query:  778 PEPLVNRADGTDLSPPRKHRVRNDTPS--PEPLVNRTDGTDLSPPRKRRVRNDTP---SPEPLANRAGADLSPPR-KRRARNDTPSPKRRVKP---LREGADSDMSPPQQRSRRRHTQSPEPDMSPPRQSHAQTSELVHDSDLSPPRKSRR--------------ESTGPASLKQQSKTGLISGSDIREEISKTKKDDWLRFKEMDPSVSGRGAEPVFRDKT---KGERISKEEYLXXXXXXXXXXXXXXXXXXXXXLAQKREAETRLQELELEKSKPFARTRDDPELDNMLKDRLRWGDPMAHLVKKKQPELVLKDLGDAERMKESGFVVPQDIPPHSWIVRKLDAAPNRYGIRPGRHWDGVDRSNGFEKKMFTKLNEKRATEREAY 1863
            PEPL       D SPPR  R R+D+ +  P P   R D +D SPPR  R R+D+    SP P   R  +D SPPR  R+ R ++PS + R  P    R+  DSD SPP+ RSRR      + D SPPR+  +  +    D DLSPPRKSR+              ++       +  ++GL S  D++EE  K +  +   F+EMD SVSGR A+ V+R K    KG+   +++  K +     E+ KEK   W KG+AQ  +   +L+E+    ++P AR RDD  ++  LK+ L   DPMA++++KK+ +  + D G+         V P     H   V      PNR+GI PG  WDGVDRSNGFE K+    N K A + E Y
Sbjct:   95 PEPL-----SPDNSPPRGKRQRHDSDNSPPRPSRKRND-SDNSPPRPSRNRHDSDKDNSP-PRRRRHDSDNSPPRPSRKIREESPSARNRRSPPRTRRDRHDSDNSPPRNRSRR------DSDNSPPRRRPSSPARRRKDDDLSPPRKSRKIEEPKKIKKEEPDSDTETSGRTLEGKRSGLQSARDLKEESDKLRAKNSKMFEEMDTSVSGRFADTVYRQKQTKKKGKDSEEDQAKKERETKKTEELKEKYKSWNKGVAQIEDRRAQLEEMARVAAEPMARARDDDAMNAHLKEVLHAADPMANMIQKKRRDTAI-DRGE--------LVYPS---YHGHFV------PNRFGIAPGYRWDGVDRSNGFEGKLAKTENTKTANQSEYY 451          
BLAST of g.arboreum_cottongen_reftransV1_0005846 vs. ExPASy Swiss-Prot
Match: BUD13_MOUSE (BUD13 homolog OS=Mus musculus GN=Bud13 PE=1 SV=1)

HSP 1 Score: 144.05 bits (362), Expect = 9.020e-35
Identity = 125/339 (36.87%), Postives = 179/339 (52.80%), Query Frame = 1
Query:  889 TDLSPPRKRRVRNDTPSPEPLANR------AGADLSPPRKRRARNDTPSPKRRVKPLREGADSDMSPPQQRSRRRHTQSPEPDMSPPRQSHAQTSELVHDSDLSPPRKSRRESTGPASLKQQSKTGLISGSDIREEISKTKKDDWLRFKEMDPSVSGRGAEPVFRDKTKGERISKEEYLXXXXXXXXXXXXXXXXXX-XXXLAQKREAETRLQELELEKSKPFARTRDDPELDNMLKDRLRWGDPMAHLVKKKQPELVLKDLGDAERMKESGFVVPQDIPPHSWIVRKLDAAPNRYGIRPGRHWDGVDRSNGFEKKMFTKLNEKRATEREAYLWSVSDM 1884
            +DLSPPRKR+ +    + + L ++      + +DLSPPRK++                + +DSD+SPP+ R RR   QS + D+SPPR+     S    DSDLSPPR+S R     A +   +KTGL++  D++ E  + KK D       D        E VFRDK+  +R  K E L+ +RK  ++  +++     GKGLAQ R+ +  +++   E  KP AR  DD +LD ML+++ R GDPMA+ +KK + +          + + SG   P                PNR+ I PG  WDGVDRSNGFE+K F +L  K+A E  AY WSV DM
Sbjct:  341 SDLSPPRKRQAKAHFEAKKQLDSKGVYQKASDSDLSPPRKKKNSG------------HQDSDSDLSPPRNRPRR---QSSDSDLSPPRRRQRTKSS---DSDLSPPRRSPRPGKKTAHMYSGAKTGLVT--DVQREHQELKKQDQ---DTTDLGAQFEFTETVFRDKSGRKRNLKLERLEQRRKAEKDSERDELYAQWGKGLAQSRQQQQNVEDAMKEMQKPLARYIDDEDLDRMLREQEREGDPMANFIKKNKAKENKNK---KVKPRYSGPAPP----------------PNRFNIWPGYRWDGVDRSNGFEQKRFARLASKKAVEELAYKWSVEDM 637          

HSP 2 Score: 67.3958 bits (163), Expect = 2.731e-10
Identity = 126/399 (31.58%), Postives = 155/399 (38.85%), Query Frame = 1
Query:  220 VLVVDEDPVWQ-----KPVNLEEDEGNDSPDEKPLVDED-IEVKRMKRLEQIRLRRGYNAIAEDGSGWVSLSPKHANTVDPNSDISPPRRQRTRNDTPSPEPGLRHSNSEIEAKDLSPPRKPRSPGLKSDLSPPRRSRAHNETTLTXXXXXXXXXXXXXXXXXXXXXXLKASRGGTDLSPPWKRRVRNGTPSPEPLVN-RADGTDLSPPRKHRVRNDTPSPEPLVNRTDGTDLSPPRKRRVRNDTPSPEPLAN-RAGADLSPPRKRRARNDTPSPKRRVKPLREGADSDMSPPQ--------------------QRSRRRHTQSPEPDMSPPRQSHAQ----------------------TSELVHDSDLSPPRKSRRESTGPASLKQQSKTGLISGSD 1266
            + +VD+D  W      KP   EE++G D P     VDE   EVK+M+        +      EDG         H +  D   D SPPRR   R+DTP                D SPPRK R      D SPPR++R     T                      P  KA     D SPP  R+ R+ TP P P    R D  DLSPPR  RVR+DTP            DLSPPR  RVR+DTP P P    R   D SPPRK    +   SP+R       G+    SP Q                    Q  RR H +SP+ ++   + S A                        S+  HDSDLSPPRK + ++   A  +  SK      SD
Sbjct:   49 MRIVDDDVGWAAISTAKPEKEEEEDG-DLPVVAEFVDERPEEVKQMEAFRSSAKWKLLGGHGEDG---------HFHHDD--QDSSPPRR--VRHDTP----------------DTSPPRKARHD--TPDPSPPRKARHDTPDT---------------------SPPRKARHDTPDPSPP--RKARHDTPDPSPPRRVRHDTPDLSPPR--RVRHDTP------------DLSPPR--RVRHDTPDPSPPRRVRHDLDASPPRKSHRNSSAVSPRR----GHHGSLGTSSPRQTHNHSPTAAQHRRTLDSSGTQHLRRAHHESPDLELHKAKSSKAAERAPSKAASQSGLGPSHPSLSTNSKYEHDSDLSPPRKRQAKAHFEAKKQLDSKGVYQKASD 372          
BLAST of g.arboreum_cottongen_reftransV1_0005846 vs. ExPASy Swiss-Prot
Match: BUD13_CHICK (BUD13 homolog OS=Gallus gallus GN=BUD13 PE=2 SV=1)

HSP 1 Score: 134.806 bits (338), Expect = 6.567e-32
Identity = 181/593 (30.52%), Postives = 277/593 (46.71%), Query Frame = 1
Query:  214 SGVLVVDEDPVWQKPVNLEEDEGNDSPDEKPLVDEDIEVKRMKRLEQIRLRRGYNAIAEDGSGWVSLSPKHANTVDPNSDISPPRRQRTR---NDTP--SPEPGLRHSNSEIEAKDLSPPRKPRSPGLKSDLSPPRRSRAHNETTLTXXXXXXXXXXXXXXXXXXXXXXLKASRGGTDLSPPWKRRVRNGTPSPEPLVNRADGTDLSPPRKHRVRNDTP--SPEPLVNRTDGTDLSPPRKRRVRNDTPSPEPLANRAGADLSPPRKRRARND---TPSPKRR-----------------VKPLREGADSDMSPPQQRSRRRHTQ-SPEPDMSPPRQSH-AQTSELVHDSDLSPPRKSRRE------STGPASLKQQSKTGLISGSDIREEISKTKKDDWLRFKEMDPSVSGRGAEPVFRDKTKGERISKEEYLXXXXXXXXXXXXXXXXXX-XXXLAQKREAETRLQELELEKSKPFARTRDDPELDNMLKDRLRWGDPMAHLVKKKQPELVLKDLGDAERMKESGFVVPQDIPPHSWIVRKLDAAPNRYGIRPGRHWDGVDRSNGFEKKMFTKLNEKRATEREAYLWSVSDM 1884
            +G+ +VD+D  W     + E E  +   + P+V E I+    +R ++++L   +       S W  L  +  ++  P+SD+S P +  TR   +D+P  SP   +RH     ++ DLSPPR+ R+    S    PR+ R H    L+                       +      DLSPP ++R  +      P   R D  DLSPPR  R R+D+P  SP P   R D  D SPPRK+R  +D+P   P   +   DLS  RK+R  +D   +PS ++R                 VK LR   DSD  PP     RR TQ + E D+SP  ++H A  S        SPP  SR        S    ++    + GL+S   +R E  + +K +    K ++     R  E +FRDK+  +R   +E L+ ++K   +  ++++    G+GLAQ R+ +  +++   E  KP AR  DD +LD ML+++ R GDPMA  ++K++ +   +        + SG   P                 NR+ I PG  WDGVDRSNGFE++ F ++  K+A +  AY WS+ DM
Sbjct:   39 AGMRIVDDDVGWSSIAAVPEKEEEEDEGDMPVVAEFID----ERPDEVKLMEEFRT----NSKWKLLGDRDEDS--PSSDVSVPAKATTRQQRHDSPDNSPPRRVRH-----DSPDLSPPRQERN---NSASLLPRKERQHGSPDLSPPR--------------------RKRHDSPDLSPPRRKRHDDSPDLSPPRRKRHDSPDLSPPR--RKRHDSPDLSP-PRRQRHDSPDPSPPRKKR--HDSPDLSPQEQQTTPDLSLQRKKRYDSDPDSSPSLRKRARSPGHKKPSRTKDASPVKKLRR--DSDSPPP-----RRGTQNASEADLSPQGKNHRALPSGKGQHGSKSPPDLSRHHYPDDKGSPKKGNMMSGVRAGLVSADVLRREQQELRKQE-RSSKHLE--EESRHTETIFRDKSGRKRDLVQERLEQQQKDEAKSERDEQYARWGRGLAQGRQQQQNVEDAIKEMQKPLARYIDDEDLDRMLREQEREGDPMAEFIRKRKAKESKEKKEKP---RYSGPAPPL----------------NRFNIWPGHRWDGVDRSNGFEQQFFARMANKKAVQELAYKWSIEDM 559          
BLAST of g.arboreum_cottongen_reftransV1_0005846 vs. ExPASy Swiss-Prot
Match: BUD13_RAT (BUD13 homolog OS=Rattus norvegicus GN=Bud13 PE=2 SV=1)

HSP 1 Score: 127.872 bits (320), Expect = 2.210e-29
Identity = 194/655 (29.62%), Postives = 280/655 (42.75%), Query Frame = 1
Query:  220 VLVVDEDPVWQKPVNLEEDEGNDSPDEKPLVDEDI-----EVKRMKRLEQIRLRRGYNAIAEDGSGWVSLSPKHANTVDPNS---------DISPPRRQRTRNDTPSPEPGLRHSNSEIEAKDLSPPRKPR--SPGLKSDLSPPRRSRAHNETTLTXXXXXXXXXXXXXXXXXXXXXXLKASRGGTDLSPPWKRRVRNGTPSPEPLVN-RADGTDLSPPRKHRVRNDTPSPEPLVNRTDGTDLSPPRKRRVRNDTPSPEPLANRAGADLSPPR---------KRRARNDTPS---PKRRVKPLRE-------------------------GADSDMSPPQQRSRRRH-------------TQSPEPDMSPPRQSHAQTSELVHDSDLSPPR-KSRREST-------------------------GPASLKQQ------SKTGLISGSDIREEISKTKKDDWLRFKEMDPSVSGRGAEPVFRDKTKGERISKEEYLXXXXXXXXXXXXXXXXXX-XXXLAQKREAETRLQELELEKSKPFARTRDDPELDNMLKDRLRWGDPMAHLVKKKQPELVLKDLGDAERMKESGFVVPQDIPPHSWIVRKLDAAPNRYGIRPGRHWDGVDRSNGFEKKMFTKLNEKRATEREAYLWSVSDM 1884
            + +VD+D  W      + ++  +   + P+V E +     EVK+M+        +     +EDG         H +  DP+          D SPPRR R     PSP   +RH     +  D SPPR+ R  SP    D SP RR     + + TR                      +      D SPP  RRVR+ TP P P    R D  D SPPR  RVR+D+ +  P  +  + + +SP R     + T SP    N + A     R          RRAR+D+P    PK +     E                           DSD+SPP++R  + H              ++ + D+SPPR++ +++     DSDLSPPR + RR+S+                          P S K+       +KTGL+  +D++ E  + KK D       D        E VFRDK+  +R  K E L+ +RK  ++  +++     GKGLAQ R+ +  +++   E  KP AR  DD +LD ML+++ R GDPMA+ +KK + +          R + +G   P                PNR+ I PG  WDGVDRSNGFE+K F +L  K+A E  AY WSV DM
Sbjct:   49 MRIVDDDVGWAAISTDKLEKEEEEDGDLPVVAEFVDERPEEVKQMEAFRSSTKWKLLGGYSEDGHF-------HNDDQDPSPPRKARHDTPDASPPRRVRHGTPEPSPPRRVRH-----DTPDPSPPRRVRHDSP----DPSPTRRGHDSPDPSPTR----------------------RVHHDSPDPSPP--RRVRHDTPDPSPPRRVRHDTPDPSPPR--RVRHDSDASPPRRSHRNSSAVSPKRGHHGSSGTSSPRQAHNHSPAAAQHRRTLDSSGAQHHRRARHDSPDLELPKAKSSKAAERPSSKTVSQSGLGPPHPSLSMNSKYEHDSDLSPPRKRQAKAHFGAKKQLDSKGVCQKASDSDLSPPRKN-SKSGHQDSDSDLSPPRNRPRRQSSDSDLSPPRRRQRTKSSDSDLSPSRRSPRSGKKTPHMYSGAKTGLV--ADVQREHQELKKQDQ---DATDLGAQFEFTETVFRDKSGRKRNLKLERLEQRRKAEKDSERDELYAQWGKGLAQSRQQQQNVEDAMKEMQKPLARYIDDEDLDRMLREQEREGDPMANFIKKNKAKENKN---KKVRPRYNGPAPP----------------PNRFNIWPGYRWDGVDRSNGFEQKRFARLASKKAVEELAYKWSVEDM 636          
BLAST of g.arboreum_cottongen_reftransV1_0005846 vs. ExPASy Swiss-Prot
Match: CWC26_SCHPO (Pre-mRNA-splicing factor cwf26 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=cwf26 PE=1 SV=2)

HSP 1 Score: 93.5893 bits (231), Expect = 2.429e-19
Identity = 50/128 (39.06%), Postives = 66/128 (51.56%), Query Frame = 1
Query: 1501 LQELELEKSKPFARTRDDPELDNMLKDRLRWGDPMAHLVKKKQPELVLKDLGDAERMKESGFVVPQDIPPHSWIVRKLDAAPNRYGIRPGRHWDGVDRSNGFEKKMFTKLNEKRATEREAYLWSVSDM 1884
            L+ELE +K+ P AR  DDPE +  LK+R RW DP A  +  K                          P  S    +  A PNR+ IRPG  WDG+ R NGFE K F + NE++A E EA++W++ DM
Sbjct:  205 LKELERQKTVPLARYEDDPEYNKELKERSRWNDPAASFLTNK--------------------------PVSSKATYQGYAPPNRFNIRPGHRWDGIIRGNGFENKWFQRQNERKAQEHEAHMWAIEDM 306          
BLAST of g.arboreum_cottongen_reftransV1_0005846 vs. ExPASy Swiss-Prot
Match: CWC26_EMENI (Pre-mRNA-splicing factor cwc26 OS=Emericella nidulans (strain FGSC A4 / ATCC 38163 / CBS 112.46 / NRRL 194 / M139) GN=cwc26 PE=3 SV=1)

HSP 1 Score: 82.8037 bits (203), Expect = 1.075e-15
Identity = 51/133 (38.35%), Postives = 62/133 (46.62%), Query Frame = 1
Query: 1477 QKREAETRLQELELEKSKPFARTRDDPELDNMLKDRLRWGDPMAHLVKKKQPELVLKDLGDAERMKESGFVVPQDIPPHSWIVRKLDAAPNRYGIRPGRHWDGVDRSNGFEKKMFTKLNEKRATEREAYLWSV 1875
            Q+ E E+R   LE  K  P ART DD EL+  LK + RW DP A  + K                   G       P +    +     PNRYGIRPG  WDGVDRSNGFEK+ F   N+K   +   Y W +
Sbjct:  232 QRAERESRRAALEEAKVMPLARTADDEELNEELKAQTRWNDPAAQFLTKST----------------GGGRSKTGKPLYKGAFQ-----PNRYGIRPGHRWDGVDRSNGFEKEWFAARNKKERMQALEYEWQM 343          
BLAST of g.arboreum_cottongen_reftransV1_0005846 vs. ExPASy Swiss-Prot
Match: CWC26_MAGO7 (Pre-mRNA-splicing factor CWC26 OS=Magnaporthe oryzae (strain 70-15 / ATCC MYA-4617 / FGSC 8958) GN=CWC26 PE=3 SV=1)

HSP 1 Score: 78.9518 bits (193), Expect = 1.735e-14
Identity = 51/133 (38.35%), Postives = 67/133 (50.38%), Query Frame = 1
Query: 1477 QKREAETRLQELELEKSKPFARTRDDPELDNMLKDRLRWGDPMAHLVKKKQPELVLKDLGDAERMKESGFVVPQDIPPHSWIVRKLDAAPNRYGIRPGRHWDGVDRSNGFEKKMFTKLNEKRATEREAYLWSV 1875
            Q  EA  R ++LE     P AR +DD E++N +K   RW DPM   + +        D  +A    ++G    +  P     V K  AAPNRYGIRPG  WDGVDR  GFE + F  LN +  T+   Y W +
Sbjct:  230 QIEEARRRREKLEDAALMPLARGKDDEEMNNAMKSEQRWNDPMMQFMSEN-------DKREAGGTAKTGGRRVKGRP-----VYKGPAAPNRYGIRPGYRWDGVDRGIGFEAERFKALNRRERTKDLEYNWQM 350          
BLAST of g.arboreum_cottongen_reftransV1_0005846 vs. ExPASy Swiss-Prot
Match: CWC26_ASPFU (Pre-mRNA-splicing factor cwc26 OS=Neosartorya fumigata (strain ATCC MYA-4609 / Af293 / CBS 101355 / FGSC A1100) GN=cwc26 PE=3 SV=1)

HSP 1 Score: 78.1814 bits (191), Expect = 2.859e-14
Identity = 49/134 (36.57%), Postives = 66/134 (49.25%), Query Frame = 1
Query: 1477 QKREAETRLQELELEKSKPFARTRDDPELDNMLKDRLRWGDPMA-HLVKKKQPELVLKDLGDAERMKESGFVVPQDIPPHSWIVRKLDAAPNRYGIRPGRHWDGVDRSNGFEKKMFTKLNEKRATEREAYLWSV 1875
            Q+ E E R Q+++  ++ P ART +D  L+  LK + RW DP A  L K K P + +      + + +  F                   PNRYGIRPG  WDGVDR NGFEK+ F   N+K   E   Y W +
Sbjct:  231 QRAEREARRQQIQEARAMPLARTIEDDALNEELKAQQRWNDPAAGFLTKTKGPGVSVT----GKPLYKGAF------------------QPNRYGIRPGHRWDGVDRGNGFEKEWFAARNKKGRLEALDYQWQM 342          
BLAST of g.arboreum_cottongen_reftransV1_0005846 vs. ExPASy Swiss-Prot
Match: CWC26_NEUCR (Pre-mRNA-splicing factor cwc-26 OS=Neurospora crassa (strain ATCC 24698 / 74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC 987) GN=cwc-26 PE=3 SV=1)

HSP 1 Score: 77.411 bits (189), Expect = 9.077e-14
Identity = 45/118 (38.14%), Postives = 62/118 (52.54%), Query Frame = 1
Query: 1522 KSKPFARTRDDPELDNMLKDRLRWGDPMAHLVKKKQPELVLKDLGDAERMKESGFVVPQDIPPHSWIVRKLDAAPNRYGIRPGRHWDGVDRSNGFEKKMFTKLNEKRATEREAYLWSV 1875
            K  P AR++DD +L+  LK + RW DPMA  +  ++ ++  +  G A R            P +     K  A PNRYGI+PG  WDGVDRSNGFE + F  LN +   +   Y W +
Sbjct:  274 KLMPLARSKDDEQLNAELKQQDRWNDPMAQFLAPEEVKVKGRKKGTAGRR-----------PTY-----KGPAPPNRYGIKPGYRWDGVDRSNGFEAERFKALNRRERNKGLEYAWQM 375          
The following BLAST results are available for this feature:
BLAST of g.arboreum_cottongen_reftransV1_0005846 vs. ExPASy TrEMBL
Analysis Date: 2016-11-15 (Homology Analysis for Gossypium arboreum CottonGen RefTrans V1 vs TrEMBL)
Total hits: 25
Match NameE-valueIdentityDescription
V7AN32_PHAVU1.627e-14552.75Uncharacterized protein OS=Phaseolus vulgaris GN=P... [more]
M4EYH8_BRARP1.731e-14553.10Uncharacterized protein OS=Brassica rapa subsp. pe... [more]
A0A0A0LTH5_CUCSA5.225e-14351.69Uncharacterized protein OS=Cucumis sativus GN=Csa_... [more]
M0U661_MUSAM3.374e-13650.26Uncharacterized protein OS=Musa acuminata subsp. m... [more]
J3MQV4_ORYBR9.333e-13650.25Uncharacterized protein OS=Oryza brachyantha GN=OB... [more]

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BLAST of g.arboreum_cottongen_reftransV1_0005846 vs. ExPASy Swiss-Prot
Analysis Date: 2016-11-15 (Homology Analysis for Gossypium arboreum CottonGen RefTrans V1 vs SwissProt)
Total hits: 13
Match NameE-valueIdentityDescription
BUD13_HUMAN1.486e-3732.72BUD13 homolog OS=Homo sapiens GN=BUD13 PE=1 SV=1[more]
BUD13_CAEEL2.132e-3537.11BUD13 homolog OS=Caenorhabditis elegans GN=R08D7.1... [more]
BUD13_MOUSE9.020e-3536.87BUD13 homolog OS=Mus musculus GN=Bud13 PE=1 SV=1[more]
BUD13_CHICK6.567e-3230.52BUD13 homolog OS=Gallus gallus GN=BUD13 PE=2 SV=1[more]
BUD13_RAT2.210e-2929.62BUD13 homolog OS=Rattus norvegicus GN=Bud13 PE=2 S... [more]
CWC26_SCHPO2.429e-1939.06Pre-mRNA-splicing factor cwf26 OS=Schizosaccharomy... [more]
CWC26_EMENI1.075e-1538.35Pre-mRNA-splicing factor cwc26 OS=Emericella nidul... [more]
CWC26_MAGO71.735e-1438.35Pre-mRNA-splicing factor CWC26 OS=Magnaporthe oryz... [more]
CWC26_ASPFU2.859e-1436.57Pre-mRNA-splicing factor cwc26 OS=Neosartorya fumi... [more]
CWC26_NEUCR9.077e-1438.14Pre-mRNA-splicing factor cwc-26 OS=Neurospora cras... [more]

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InterPro
Analysis Name: InterProScan analysis for Gossypium arboreum CottonGen RefTrans V1
Date Performed: 2016-11-14
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 2..29
NoneNo IPR availablePANTHERPTHR31809FAMILY NOT NAMEDcoord: 1..191
coord: 208..592
IPR018609Bud13PFAMPF09736Bud13coord: 416..575
e-value: 4.9E-41
score: 140.4

Sequences
The following sequences are available for this feature:

contig sequence

>g.arboreum_cottongen_reftransV1_0005846 ID=g.arboreum_cottongen_reftransV1_0005846; Name=g.arboreum_cottongen_reftransV1_0005846; organism=Gossypium arboreum; type=contig; length=2091bp
CTTTTCTTCCCCTAATTTATCCCTCTCGTCTTCCTCCGGTTCCCGACCCA
AGTCCTCCCTTGCCTTCCAAGTTTCCGATCGAAGAAGAAATTAAATAAGG
GGCAGCCAATGGCGAGTTCTTTGAAAGAATACCTAAAAAGATACGAGACC
AAAAACGAAGAAGAGGAGCAGAAGAAGAAAAGGAAGAAAAAGAAGAAAAC
TAAACCCGAATCATCAGGTGTTCTAGTGGTGGATGAAGATCCAGTGTGGC
AGAAACCTGTTAATCTCGAAGAAGATGAGGGCAATGATTCACCTGATGAG
AAGCCACTAGTGGATGAAGATATAGAAGTAAAAAGAATGAAAAGGCTAGA
GCAGATTAGGTTGAGGAGGGGCTACAATGCCATTGCCGAAGATGGTAGTG
GTTGGGTCTCGCTTTCTCCTAAACACGCTAATACAGTGGATCCTAATTCT
GATATTTCCCCTCCTCGTAGGCAGCGGACACGAAATGACACACCTTCTCC
AGAACCTGGGTTGAGGCACTCAAACTCTGAAATAGAAGCTAAGGATTTGT
CACCTCCGAGAAAACCACGTTCCCCTGGTTTGAAATCTGATTTGTCACCG
CCAAGGAGAAGTAGGGCTCATAATGAGACAACATTAACAAGAGAAGATTC
TGATTTGTCACCTCCTAGCAGGAGGCCAGCTCGGGCTGGTTCACCAGAAC
CTCGACTTAAGGCTTCTAGAGGTGGTACTGATTTATCTCCTCCTTGGAAG
CGGAGGGTTAGGAATGGCACACCCTCACCAGAACCTTTAGTAAACAGAGC
AGATGGTACTGATTTATCTCCTCCTAGGAAACATAGGGTTCGGAATGACA
CACCTTCACCAGAACCTTTAGTAAACCGAACAGATGGTACTGATTTATCT
CCTCCAAGGAAACGGAGGGTTCGGAATGACACACCTTCACCAGAACCTTT
AGCAAACAGAGCAGGTGCTGATCTGTCACCACCTCGGAAACGAAGGGCGA
GAAATGATACACCTTCACCAAAACGGAGGGTGAAGCCTTTGAGAGAAGGT
GCTGATAGTGATATGTCACCTCCACAGCAAAGGTCAAGACGCCGACATAC
ACAATCACCTGAGCCTGATATGTCCCCACCTAGACAATCTCATGCCCAAA
CATCTGAGCTTGTTCATGATTCGGATCTCTCCCCTCCAAGGAAAAGTAGG
AGGGAATCAACTGGTCCTGCTTCTTTGAAACAGCAATCCAAAACTGGTTT
AATTTCTGGCAGTGATATTCGAGAAGAAATTTCAAAAACGAAGAAGGATG
ATTGGTTAAGGTTTAAGGAGATGGATCCATCTGTAAGCGGACGAGGTGCT
GAGCCTGTATTTCGTGATAAGACAAAAGGGGAGCGCATATCAAAAGAAGA
GTACCTTAAGTCAAAACGAAAAGGAGGAGAAGAAAAGCCCAAGGAGAAAG
AGTTGGAATGGGGCAAAGGCTTAGCGCAAAAACGTGAAGCTGAGACTAGG
TTGCAAGAATTAGAACTCGAGAAGAGTAAACCATTTGCTCGAACAAGGGA
TGACCCAGAGCTCGACAATATGTTGAAGGATCGACTAAGATGGGGTGATC
CTATGGCTCATTTGGTCAAGAAAAAACAACCTGAGCTGGTTCTTAAAGAC
CTAGGGGATGCTGAGAGAATGAAAGAGTCGGGGTTCGTAGTTCCTCAAGA
TATTCCCCCGCATAGTTGGATAGTAAGAAAACTAGATGCTGCACCAAATC
GTTATGGTATAAGACCAGGAAGACATTGGGACGGAGTCGATCGTAGTAAT
GGTTTTGAGAAGAAAATGTTCACCAAATTAAACGAGAAACGGGCAACGGA
AAGGGAGGCGTATCTCTGGTCTGTATCCGACATGTGATTCAACACTCCAC
AGCAGACTTTTTAAGTGAGAAATTAAGTATGCTGAAATTGAGAAATTATT
TGCTTCATGCTTTTGTGCCAATTTTAAATTATAACAAATCAATGGTTTTG
ATCCATGATAATTGACTCAGTGAGTCTTGACTGGTGTATTATCATTTCAA
ATCAATTTTCATCAACTTTTGGGTGTCAATTTTATAGGTTT
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Annotated Terms
The following terms have been associated with this contig:
Vocabulary: INTERPRO
TermDefinition
IPR018609Bud13