g.arboreum_cottongen_reftransV1_0013834, g.arboreum_cottongen_reftransV1_0013834 (contig) Gossypium arboreum

Overview


Name	g.arboreum_cottongen_reftransV1_0013834
Unique Name	g.arboreum_cottongen_reftransV1_0013834
Type	contig
Organism	Gossypium arboreum (Tree cotton)
Sequence length	1987

Analyses

This contig is derived from or has results from the following analyses


Analysis Name	Date Performed
Gossypium arboreum CottonGen RefTrans V1	2016-11-14
InterProScan analysis for Gossypium arboreum CottonGen RefTrans V1	2016-11-14
Homology Analysis for Gossypium arboreum CottonGen RefTrans V1 vs TrEMBL	2016-11-15
Homology Analysis for Gossypium arboreum CottonGen RefTrans V1 vs SwissProt	2016-11-15

Homology

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BLAST of g.arboreum_cottongen_reftransV1_0013834 vs. ExPASy TrEMBL
Match: A0A0D2UPY7_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_011G066000 PE=3 SV=1)

HSP 1 Score: 929.858 bits (2402), Expect = 0.000e+0
Identity = 494/505 (97.82%), Postives = 498/505 (98.61%), Query Frame = 1

Query:  205 MSRYDSRSGDPASYRDRRXXXXXXXXXXXXXXXXXXXXRKDYDAGEPPRKLDLDGLTPFEKNFYVESPSVAAMSEMEVEEYRQKREITVEGRDVPKPVKSFADVRFPDYVLQEVMKAGFVEPTAIQAQGWPMALKGRDLIGIAETGSGKTLAYLLPAIVHVNAQPILAPGDGPIVLVLAPTRELAVQIQQEAAKFGASSRIKNTCIYGGVPKGPQVRDLQKGVEIVIATPGRLIDMLDSHHTNLRRVTYLVLDEADRMLDMGFEPQIRKIVSQIRPDRQTLYWSATWPKEVEQLARQFLYNPYKVIIGSADLKANHAIRQHVNIVSESQKYNKLVKLLEDIMDGSRILIFMDTKKGCDQITRQLRMDGWPALSIHGDKSQAERDWVLSEFKAGKSPIMTATDVAARGLDVKDVKYVINYDFPGSLEDYVHXXXXXXXXXXXXXXXXFFTAANARFAKELIAILEEAGQKVSPELAAMGRGAPPPPSGHGGFRDRGKGYSGGRTWS 1719
            MSRYDSRSGDP SYRDRRSDSGFGGASAYGGSGRSLSSRKDYDA EPPRKLDLDGLTPFEKNFYVESPSVAAMSEMEVEEYRQ+REITVEGRDVPKPVKSFADV FPDYVLQEV KAGFVEPTAIQAQGWPMALKGRDLIGIAETGSGKTLAYLLPAIVHVNAQPILAPGDGPIVLVLAPTRELAVQIQQEAAKFGASSRIKNTCIYGGVPKGPQVRDLQKGVEIVIATPGRLIDMLDSHHTNLRRVTYLVLDEADRMLDMGFEPQIRKIVSQIRPDRQTLYWSATWPKEVEQLARQFLYNPYKVIIGSADLKANHAIRQHV+IVSESQKYNKLVKLLEDIMDGSRILIFMDTKKGCDQITRQLRMDGWPALSIHGDKSQAERDWVLSEFKAGKSPIMTATDVAARGLDVKDVKYVINYDFPGSLEDYVHRIGRTGRAGAKGTAYTFFTAANARFAKELIAIL+EAGQKVSPELAAMGRGAPPPPSGHGGFRDRGKGY G R W+
Sbjct:    1 MSRYDSRSGDPTSYRDRRSDSGFGGASAYGGSGRSLSSRKDYDAAEPPRKLDLDGLTPFEKNFYVESPSVAAMSEMEVEEYRQRREITVEGRDVPKPVKSFADVGFPDYVLQEVSKAGFVEPTAIQAQGWPMALKGRDLIGIAETGSGKTLAYLLPAIVHVNAQPILAPGDGPIVLVLAPTRELAVQIQQEAAKFGASSRIKNTCIYGGVPKGPQVRDLQKGVEIVIATPGRLIDMLDSHHTNLRRVTYLVLDEADRMLDMGFEPQIRKIVSQIRPDRQTLYWSATWPKEVEQLARQFLYNPYKVIIGSADLKANHAIRQHVDIVSESQKYNKLVKLLEDIMDGSRILIFMDTKKGCDQITRQLRMDGWPALSIHGDKSQAERDWVLSEFKAGKSPIMTATDVAARGLDVKDVKYVINYDFPGSLEDYVHRIGRTGRAGAKGTAYTFFTAANARFAKELIAILKEAGQKVSPELAAMGRGAPPPPSGHGGFRDRGKGYGGSRPWN 505

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BLAST of g.arboreum_cottongen_reftransV1_0013834 vs. ExPASy TrEMBL
Match: A0A0B0MHH3_GOSAR (DEAD-box ATP-dependent RNA helicase 20-like protein OS=Gossypium arboreum GN=F383_19398 PE=3 SV=1)

HSP 1 Score: 926.006 bits (2392), Expect = 0.000e+0
Identity = 499/519 (96.15%), Postives = 502/519 (96.72%), Query Frame = 1

Query:  205 MSRYDSRSGDPASYRDRRXXXXXXXXXXXXXXXXXXXXRKDYDAGEPPRKLDLDGLTPFEKNFYVESPSVAAMSEMEVEEYRQKREITVEGRDVPKPVKSFADVRFPDYVLQEVMKAGFVEPTAIQAQGWPMALKGRDLIGIAETGSGKTLAYLLPAIVHVNAQPILAPGDGPIVLVLAPTRELAVQIQQEAAKFGASSRIKNTCIYGGVPKGPQVRDLQKGVEIVIATPGRLIDMLDSHHTNLRRVTYLVLDEADRMLDMGFEPQIRKIVSQIRPDRQTLYWSATWPKEVEQLARQFLYNPYKVIIGSADLKANHAIRQHVNIVSESQKYNKLVKLLEDIMDGSRILIFMDTKKGCDQITRQLRMDGWPALSIHGDKSQAERDWVLSEFKAGKSPIMTATDVAARGLDVKDVKYVINYDFPGSLEDYVHXXXXXXXXXXXXXXXXFFTAANARFAKELIAILEEAGQKVSPELAAMGRGAPPPPSGHGGFR--------------DRGKGYSGGRTWS 1719
            MSRYDSRSGDPASYRDRRSDSGFGGASAYGGSGRSLSSRKDYDAGEPPRKLDLDGLTPFEKNFYVESPSVAAMSEMEVEEYRQKREITVEGRDVPKPVKSFADVRFPDYVLQEVMKAGFVEPTAIQAQGWPMALKGRDLIGIAETGSGKTLAYLLPAIVHVNAQPILAPGDGPIVLVLAPTRELAVQIQQEAAKFGASSRIKNTCIYGGVPKGPQVRDLQKGVEIVIATPGRLIDMLDSHHTNLRRVTYLVLDEADRMLDMGFEPQIRKIVSQIRPDRQTLYWSATWPKEVEQLARQFLYNPYKVIIGSADLKANHAIRQHV+IVSESQKYNKLVKLLEDIMDGSRILIFMDTKKGCDQITRQLRMDGWPALSIHGDKSQAERDWVLSEFKAGKSPIMTATDVAARGLDVKDVKYVINYDFPGSLEDYVHRIGRTGRAGAKGTAYTFFTAANARFAKELIAIL+EAGQKVSPELAAMGRGAPPPPSGHGGFR              DRGKGY G R W+
Sbjct:    1 MSRYDSRSGDPASYRDRRSDSGFGGASAYGGSGRSLSSRKDYDAGEPPRKLDLDGLTPFEKNFYVESPSVAAMSEMEVEEYRQKREITVEGRDVPKPVKSFADVRFPDYVLQEVMKAGFVEPTAIQAQGWPMALKGRDLIGIAETGSGKTLAYLLPAIVHVNAQPILAPGDGPIVLVLAPTRELAVQIQQEAAKFGASSRIKNTCIYGGVPKGPQVRDLQKGVEIVIATPGRLIDMLDSHHTNLRRVTYLVLDEADRMLDMGFEPQIRKIVSQIRPDRQTLYWSATWPKEVEQLARQFLYNPYKVIIGSADLKANHAIRQHVDIVSESQKYNKLVKLLEDIMDGSRILIFMDTKKGCDQITRQLRMDGWPALSIHGDKSQAERDWVLSEFKAGKSPIMTATDVAARGLDVKDVKYVINYDFPGSLEDYVHRIGRTGRAGAKGTAYTFFTAANARFAKELIAILKEAGQKVSPELAAMGRGAPPPPSGHGGFRVRDRDRDRDRDRDRDRGKGYGGSRPWN 519

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BLAST of g.arboreum_cottongen_reftransV1_0013834 vs. ExPASy TrEMBL
Match: A0A0B0PIE4_GOSAR (DEAD-box ATP-dependent RNA helicase 20-like protein OS=Gossypium arboreum GN=F383_00152 PE=3 SV=1)

HSP 1 Score: 917.531 bits (2370), Expect = 0.000e+0
Identity = 484/505 (95.84%), Postives = 495/505 (98.02%), Query Frame = 1

Query:  205 MSRYDSRSGDPASYRDRRXXXXXXXXXXXXXXXXXXXXRKDYDAGEPPRKLDLDGLTPFEKNFYVESPSVAAMSEMEVEEYRQKREITVEGRDVPKPVKSFADVRFPDYVLQEVMKAGFVEPTAIQAQGWPMALKGRDLIGIAETGSGKTLAYLLPAIVHVNAQPILAPGDGPIVLVLAPTRELAVQIQQEAAKFGASSRIKNTCIYGGVPKGPQVRDLQKGVEIVIATPGRLIDMLDSHHTNLRRVTYLVLDEADRMLDMGFEPQIRKIVSQIRPDRQTLYWSATWPKEVEQLARQFLYNPYKVIIGSADLKANHAIRQHVNIVSESQKYNKLVKLLEDIMDGSRILIFMDTKKGCDQITRQLRMDGWPALSIHGDKSQAERDWVLSEFKAGKSPIMTATDVAARGLDVKDVKYVINYDFPGSLEDYVHXXXXXXXXXXXXXXXXFFTAANARFAKELIAILEEAGQKVSPELAAMGRGAPPPPSGHGGFRDRGKGYSGGRTWS 1719
            MSRYDSRSGDP SYRDRRSDSGFGGASAYGGS RS SSR+DYD  EPPRKLDLDGLTPFEKNFY+ESPSVAAMS+ EVE+YR++REITVEGRDVPKPV SF D+ FPDYVLQE+ KAGFVEPTAIQAQGWPMALKGRDLIGIAETGSGKTLAYLLPAIVHVNAQPILAPGDGPIVLVLAPTRELAVQIQQEAAKFGASSRIKNTCIYGGVPKGPQVRDLQKGVEIVIATPGRLIDML+S+HTNLRRVTYLVLDEADRMLDMGFEPQIRKIVSQIRPDRQTLYWSATWPKEVEQLARQFLYNPYKV+IGSADLKANHAIRQHVNIVSESQKYNKLVKLLEDIMDGSRILIFMDTKKGCDQITRQLRMDGWPALSIHGDKSQAERDWVLSEFKAGKSPIMTATDVAARGLDVKDVKYVINYDFPGSLEDYVHRIGRTGRAGAKGTAYTFFTAANARFAKELIAILEEAGQKVSPELAAMGRGAPPPPSGHGGFRDRGKGYSGGRTWS
Sbjct:    1 MSRYDSRSGDPTSYRDRRSDSGFGGASAYGGSVRSSSSRRDYDGAEPPRKLDLDGLTPFEKNFYIESPSVAAMSDAEVEDYRRRREITVEGRDVPKPVNSFRDIGFPDYVLQEITKAGFVEPTAIQAQGWPMALKGRDLIGIAETGSGKTLAYLLPAIVHVNAQPILAPGDGPIVLVLAPTRELAVQIQQEAAKFGASSRIKNTCIYGGVPKGPQVRDLQKGVEIVIATPGRLIDMLESNHTNLRRVTYLVLDEADRMLDMGFEPQIRKIVSQIRPDRQTLYWSATWPKEVEQLARQFLYNPYKVVIGSADLKANHAIRQHVNIVSESQKYNKLVKLLEDIMDGSRILIFMDTKKGCDQITRQLRMDGWPALSIHGDKSQAERDWVLSEFKAGKSPIMTATDVAARGLDVKDVKYVINYDFPGSLEDYVHRIGRTGRAGAKGTAYTFFTAANARFAKELIAILEEAGQKVSPELAAMGRGAPPPPSGHGGFRDRGKGYSGGRTWS 505

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BLAST of g.arboreum_cottongen_reftransV1_0013834 vs. ExPASy TrEMBL
Match: A0A0D2TPW0_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_009G140700 PE=3 SV=1)

HSP 1 Score: 909.827 bits (2350), Expect = 0.000e+0
Identity = 480/505 (95.05%), Postives = 491/505 (97.23%), Query Frame = 1

Query:  205 MSRYDSRSGDPASYRDRRXXXXXXXXXXXXXXXXXXXXRKDYDAGEPPRKLDLDGLTPFEKNFYVESPSVAAMSEMEVEEYRQKREITVEGRDVPKPVKSFADVRFPDYVLQEVMKAGFVEPTAIQAQGWPMALKGRDLIGIAETGSGKTLAYLLPAIVHVNAQPILAPGDGPIVLVLAPTRELAVQIQQEAAKFGASSRIKNTCIYGGVPKGPQVRDLQKGVEIVIATPGRLIDMLDSHHTNLRRVTYLVLDEADRMLDMGFEPQIRKIVSQIRPDRQTLYWSATWPKEVEQLARQFLYNPYKVIIGSADLKANHAIRQHVNIVSESQKYNKLVKLLEDIMDGSRILIFMDTKKGCDQITRQLRMDGWPALSIHGDKSQAERDWVLSEFKAGKSPIMTATDVAARGLDVKDVKYVINYDFPGSLEDYVHXXXXXXXXXXXXXXXXFFTAANARFAKELIAILEEAGQKVSPELAAMGRGAPPPPSGHGGFRDRGKGYSGGRTWS 1719
            MSRYDSRSGDP SYRDRRSDSGFGGASAY GS RS SSR+DYD  EPPRKLDLDGLTPFEKNFY+ESP VAAMS+ EVE+YR++REITVEGRDVPKPV SF D+ FPDYVLQE+ KAGFVEPTAIQAQGWPMALKGRDLIGIAETGSGKTLAYLLPAIVHVNAQPILAPGDGPIVLVLAPTRELAVQIQQEAAKFGASSRIKNTCIYGGVPKGPQVRDLQKGVEIVIATPGRLIDML+S+HTNLRRVTYLVLDEADRMLDMGFEPQIRKIVSQIRPDRQTLYWSATWPKEVEQLARQFLYNPYKV+IGSADLKANHAIRQHVNIVSESQKYNKLVKLLEDIMDGSRILIFMDTKKGCDQITRQLRMDGWP LSIHGDKSQAERDWVLSEFKAGKSPIMTATDVAARGLDVKDVKYVINYDFPGSLEDYVHRIGRTGRAGAKGTAYTFFTAANARFAKELIAILEEAGQKVSPELAAMGRGAPPPPSGHGGFRDRGKGYSGGR WS
Sbjct:    1 MSRYDSRSGDPTSYRDRRSDSGFGGASAYDGSVRSSSSRRDYDGAEPPRKLDLDGLTPFEKNFYIESPLVAAMSDAEVEDYRRRREITVEGRDVPKPVNSFRDIGFPDYVLQEITKAGFVEPTAIQAQGWPMALKGRDLIGIAETGSGKTLAYLLPAIVHVNAQPILAPGDGPIVLVLAPTRELAVQIQQEAAKFGASSRIKNTCIYGGVPKGPQVRDLQKGVEIVIATPGRLIDMLESNHTNLRRVTYLVLDEADRMLDMGFEPQIRKIVSQIRPDRQTLYWSATWPKEVEQLARQFLYNPYKVVIGSADLKANHAIRQHVNIVSESQKYNKLVKLLEDIMDGSRILIFMDTKKGCDQITRQLRMDGWPTLSIHGDKSQAERDWVLSEFKAGKSPIMTATDVAARGLDVKDVKYVINYDFPGSLEDYVHRIGRTGRAGAKGTAYTFFTAANARFAKELIAILEEAGQKVSPELAAMGRGAPPPPSGHGGFRDRGKGYSGGRPWS 505

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BLAST of g.arboreum_cottongen_reftransV1_0013834 vs. ExPASy TrEMBL
Match: A0A061GD47_THECC (DEA(D/H)-box RNA helicase family protein OS=Theobroma cacao GN=TCM_029008 PE=3 SV=1)

HSP 1 Score: 893.264 bits (2307), Expect = 0.000e+0
Identity = 475/502 (94.62%), Postives = 485/502 (96.61%), Query Frame = 1

Query:  205 MSRYDSRSGDPASYRDRRXXXXXXXXXXXXXXXXXXXXRKDYDAGEPPRKLDLDGLTPFEKNFYVESPSVAAMSEMEVEEYRQKREITVEGRDVPKPVKSFADVRFPDYVLQEVMKAGFVEPTAIQAQGWPMALKGRDLIGIAETGSGKTLAYLLPAIVHVNAQPILAPGDGPIVLVLAPTRELAVQIQQEAAKFGASSRIKNTCIYGGVPKGPQVRDLQKGVEIVIATPGRLIDMLDSHHTNLRRVTYLVLDEADRMLDMGFEPQIRKIVSQIRPDRQTLYWSATWPKEVEQLARQFLYNPYKVIIGSADLKANHAIRQHVNIVSESQKYNKLVKLLEDIMDGSRILIFMDTKKGCDQITRQLRMDGWPALSIHGDKSQAERDWVLSEFKAGKSPIMTATDVAARGLDVKDVKYVINYDFPGSLEDYVHXXXXXXXXXXXXXXXXFFTAANARFAKELIAILEEAGQKVSPELAAMGRGAPPPPSGHGGFRDRGKGYSGGR 1710
            MSRYDSRSGDP SYRDRRSDSGFGGASAYGGS RS SSR+DYD  EPPRKLDLDGLTPFEKNFYVESP VAAMS  EVEEYRQ+REITVEGRDVPKPVKSF D+ FP+YVLQE+ KAGFVEPT IQAQGWPMALKGRDLIGIAETGSGKTLAYLLPAIVHVNAQPILAPGDGPIVLVLAPTRELAVQIQQEAAKFGASSRIKNTCIYGGVPKGPQVRDLQKGVEIVIATPGRLIDML+SHHTNLRRVTYLVLDEADRMLDMGFEPQIRKIVSQIRPDRQTLYWSATWPKEVEQLARQFLYNPYKVIIGSADLKANHAIRQHV+IV ESQKY+KLVKLLEDIMDGSRILIFMDTKKGCDQITR+LRMDGWPALSIHGDKSQAERDWVLSEFKAGKSPIMTATDVAARGLDVKDVKYVINYDFPGSLEDYVHRIGRTGRAGAKGTAYTFFTAANARFAKELI ILEEAGQKVSPELAAMGRGAPPPPSGHGGFRDRG+GY   R
Sbjct:    1 MSRYDSRSGDPTSYRDRRSDSGFGGASAYGGSMRSSSSRRDYDGAEPPRKLDLDGLTPFEKNFYVESPLVAAMSATEVEEYRQRREITVEGRDVPKPVKSFRDMGFPEYVLQEITKAGFVEPTPIQAQGWPMALKGRDLIGIAETGSGKTLAYLLPAIVHVNAQPILAPGDGPIVLVLAPTRELAVQIQQEAAKFGASSRIKNTCIYGGVPKGPQVRDLQKGVEIVIATPGRLIDMLESHHTNLRRVTYLVLDEADRMLDMGFEPQIRKIVSQIRPDRQTLYWSATWPKEVEQLARQFLYNPYKVIIGSADLKANHAIRQHVDIVPESQKYSKLVKLLEDIMDGSRILIFMDTKKGCDQITRRLRMDGWPALSIHGDKSQAERDWVLSEFKAGKSPIMTATDVAARGLDVKDVKYVINYDFPGSLEDYVHRIGRTGRAGAKGTAYTFFTAANARFAKELIVILEEAGQKVSPELAAMGRGAPPPPSGHGGFRDRGRGYGSSR 502

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BLAST of g.arboreum_cottongen_reftransV1_0013834 vs. ExPASy TrEMBL
Match: A0A0D2ULQ3_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_009G140700 PE=3 SV=1)

HSP 1 Score: 875.159 bits (2260), Expect = 0.000e+0
Identity = 463/487 (95.07%), Postives = 474/487 (97.33%), Query Frame = 1

Query:  205 MSRYDSRSGDPASYRDRRXXXXXXXXXXXXXXXXXXXXRKDYDAGEPPRKLDLDGLTPFEKNFYVESPSVAAMSEMEVEEYRQKREITVEGRDVPKPVKSFADVRFPDYVLQEVMKAGFVEPTAIQAQGWPMALKGRDLIGIAETGSGKTLAYLLPAIVHVNAQPILAPGDGPIVLVLAPTRELAVQIQQEAAKFGASSRIKNTCIYGGVPKGPQVRDLQKGVEIVIATPGRLIDMLDSHHTNLRRVTYLVLDEADRMLDMGFEPQIRKIVSQIRPDRQTLYWSATWPKEVEQLARQFLYNPYKVIIGSADLKANHAIRQHVNIVSESQKYNKLVKLLEDIMDGSRILIFMDTKKGCDQITRQLRMDGWPALSIHGDKSQAERDWVLSEFKAGKSPIMTATDVAARGLDVKDVKYVINYDFPGSLEDYVHXXXXXXXXXXXXXXXXFFTAANARFAKELIAILEEAGQKVSPELAAMGRGAPPPPSG 1665
            MSRYDSRSGDP SYRDRRSDSGFGGASAY GS RS SSR+DYD  EPPRKLDLDGLTPFEKNFY+ESP VAAMS+ EVE+YR++REITVEGRDVPKPV SF D+ FPDYVLQE+ KAGFVEPTAIQAQGWPMALKGRDLIGIAETGSGKTLAYLLPAIVHVNAQPILAPGDGPIVLVLAPTRELAVQIQQEAAKFGASSRIKNTCIYGGVPKGPQVRDLQKGVEIVIATPGRLIDML+S+HTNLRRVTYLVLDEADRMLDMGFEPQIRKIVSQIRPDRQTLYWSATWPKEVEQLARQFLYNPYKV+IGSADLKANHAIRQHVNIVSESQKYNKLVKLLEDIMDGSRILIFMDTKKGCDQITRQLRMDGWP LSIHGDKSQAERDWVLSEFKAGKSPIMTATDVAARGLDVKDVKYVINYDFPGSLEDYVHRIGRTGRAGAKGTAYTFFTAANARFAKELIAILEEAGQKVSPELAAMGRGAPPPPSG
Sbjct:    1 MSRYDSRSGDPTSYRDRRSDSGFGGASAYDGSVRSSSSRRDYDGAEPPRKLDLDGLTPFEKNFYIESPLVAAMSDAEVEDYRRRREITVEGRDVPKPVNSFRDIGFPDYVLQEITKAGFVEPTAIQAQGWPMALKGRDLIGIAETGSGKTLAYLLPAIVHVNAQPILAPGDGPIVLVLAPTRELAVQIQQEAAKFGASSRIKNTCIYGGVPKGPQVRDLQKGVEIVIATPGRLIDMLESNHTNLRRVTYLVLDEADRMLDMGFEPQIRKIVSQIRPDRQTLYWSATWPKEVEQLARQFLYNPYKVVIGSADLKANHAIRQHVNIVSESQKYNKLVKLLEDIMDGSRILIFMDTKKGCDQITRQLRMDGWPTLSIHGDKSQAERDWVLSEFKAGKSPIMTATDVAARGLDVKDVKYVINYDFPGSLEDYVHRIGRTGRAGAKGTAYTFFTAANARFAKELIAILEEAGQKVSPELAAMGRGAPPPPSG 487

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BLAST of g.arboreum_cottongen_reftransV1_0013834 vs. ExPASy TrEMBL
Match: B9MWR8_POPTR (DEAD box RNA helicase family protein OS=Populus trichocarpa GN=POPTR_0003s03040g PE=3 SV=1)

HSP 1 Score: 873.233 bits (2255), Expect = 0.000e+0
Identity = 448/505 (88.71%), Postives = 466/505 (92.28%), Query Frame = 1

Query:  205 MSRYDSRSGDPASYRDRRXXXXXXXXXXXXXXXXXXXXRKDYDAGEPPRKLDLDGLTPFEKNFYVESPSVAAMSEMEVEEYRQKREITVEGRDVPKPVKSFADVRFPDYVLQEVMKAGFVEPTAIQAQGWPMALKGRDLIGIAETGSGKTLAYLLPAIVHVNAQPILAPGDGPIVLVLAPTRELAVQIQQEAAKFGASSRIKNTCIYGGVPKGPQVRDLQKGVEIVIATPGRLIDMLDSHHTNLRRVTYLVLDEADRMLDMGFEPQIRKIVSQIRPDRQTLYWSATWPKEVEQLARQFLYNPYKVIIGSADLKANHAIRQHVNIVSESQKYNKLVKLLEDIMDGSRILIFMDTKKGCDQITRQLRMDGWPALSIHGDKSQAERDWVLSEFKAGKSPIMTATDVAARGLDVKDVKYVINYDFPGSLEDYVHXXXXXXXXXXXXXXXXFFTAANARFAKELIAILEEAGQKVSPELAAMGRGAPPPPSGHGGFRDRGKGYSGGRTWS 1719
            MSRYDSRSGDP SYRDRRS  G     +          R+++  G+ P K DLDGLTPFEKNF+VESPSVAAMSE +VEEYR +REITVEGRDVPKPVKSF DV FPDYVLQE+ KAGF EPT IQAQGWPMALKGRDLIGIAETGSGKTLAYLLPAI+HVNAQP LAPGDGPIVLVLAPTRELAVQIQQEAAKFGASSRIKNTCIYGGVPKGPQVRDLQKGVEIVIATPGRLIDM++SHHTNLRRVTYLVLDEADRMLDMGFEPQIRKIVSQIRPDRQTLYWSATWPKEVEQLARQ LYNPYKVIIGS DLKANHAIRQHV+IVSE+QKYNKLVKLLEDIMDGSRILIFMDTKKGCDQITRQLRMDGWPALSIHGDKSQAERDWVLSEFKAGKSPIMTATDVAARGLDVKDVKYVINYDFPGSLEDYVHRIGRTGRAGAKGTAYTFFTA NARFAKEL+ ILEEAGQKVSPEL AM RGAPP  SGHGGFRDRG+GYSGGR+W+
Sbjct:    1 MSRYDSRSGDPTSYRDRRSYGGGSTRPSSE--------RREHGRGDSPAKSDLDGLTPFEKNFHVESPSVAAMSERDVEEYRLRREITVEGRDVPKPVKSFHDVGFPDYVLQEISKAGFTEPTPIQAQGWPMALKGRDLIGIAETGSGKTLAYLLPAIIHVNAQPFLAPGDGPIVLVLAPTRELAVQIQQEAAKFGASSRIKNTCIYGGVPKGPQVRDLQKGVEIVIATPGRLIDMMESHHTNLRRVTYLVLDEADRMLDMGFEPQIRKIVSQIRPDRQTLYWSATWPKEVEQLARQSLYNPYKVIIGSPDLKANHAIRQHVDIVSENQKYNKLVKLLEDIMDGSRILIFMDTKKGCDQITRQLRMDGWPALSIHGDKSQAERDWVLSEFKAGKSPIMTATDVAARGLDVKDVKYVINYDFPGSLEDYVHRIGRTGRAGAKGTAYTFFTAGNARFAKELVTILEEAGQKVSPELTAMARGAPPLLSGHGGFRDRGRGYSGGRSWN 497

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BLAST of g.arboreum_cottongen_reftransV1_0013834 vs. ExPASy TrEMBL
Match: B9SN43_RICCO (Dead box ATP-dependent RNA helicase, putative OS=Ricinus communis GN=RCOM_0312580 PE=3 SV=1)

HSP 1 Score: 864.374 bits (2232), Expect = 0.000e+0
Identity = 458/486 (94.24%), Postives = 471/486 (96.91%), Query Frame = 1

Query:  205 MSRYDSRSGDPASYRDRRXXXXXXXXXXXXXXXXXXXXRKDYDAGEPPRKLDLDGLTPFEKNFYVESPSVAAMSEMEVEEYRQKREITVEGRDVPKPVKSFADVRFPDYVLQEVMKAGFVEPTAIQAQGWPMALKGRDLIGIAETGSGKTLAYLLPAIVHVNAQPILAPGDGPIVLVLAPTRELAVQIQQEAAKFGASSRIKNTCIYGGVPKGPQVRDLQKGVEIVIATPGRLIDMLDSHHTNLRRVTYLVLDEADRMLDMGFEPQIRKIVSQIRPDRQTLYWSATWPKEVEQLARQFLYNPYKVIIGSADLKANHAIRQHVNIVSESQKYNKLVKLLEDIMDGSRILIFMDTKKGCDQITRQLRMDGWPALSIHGDKSQAERDWVLSEFKAGKSPIMTATDVAARGLDVKDVKYVINYDFPGSLEDYVHXXXXXXXXXXXXXXXXFFTAANARFAKELIAILEEAGQKVSPELAAMGRGAPPPPS 1662
            MSRYDSRSGDP SYRDRRSDSGFGGA AYGGSGRS S R++YD    PRK DLDGLTPFEKNFYVESPSVAAMSE EVEEYRQ+REITVEGRDVPKPVKSF DV FPDYVL+EV +AGFVEPT IQAQGWPMALKGRDLIGIAETGSGKTLAYLLPAIVHVNAQPILAPGDGPIVLVLAPTRELAVQIQQEA KFGASSRIKNTCIYGGVPKGPQVRDLQKGVEIVIATPGRLIDML+SHHTNLRRVTYLVLDEADRMLDMGF+PQIRKIVSQIRPDRQTLYWSATWPKEVEQLARQFLYNPYKV+IGSADLKANHAIRQHV+IVSE+QKYNKLVKLLEDIMDGSRILIFMDTKKGCDQITRQLRMDGWPALSIHGDKSQAERDWVLSEFKAGKSPIMTATDVAARGLDVKDVK+VINYDFPGSLEDYVHRIGRTGRAGAKGTAYTFFTA+NARFAKELI+ILEEAGQKVSPELAAMGRGAPPPPS
Sbjct:    1 MSRYDSRSGDPTSYRDRRSDSGFGGALAYGGSGRSSSERREYDRAISPRKSDLDGLTPFEKNFYVESPSVAAMSEREVEEYRQRREITVEGRDVPKPVKSFRDVGFPDYVLEEVTRAGFVEPTPIQAQGWPMALKGRDLIGIAETGSGKTLAYLLPAIVHVNAQPILAPGDGPIVLVLAPTRELAVQIQQEATKFGASSRIKNTCIYGGVPKGPQVRDLQKGVEIVIATPGRLIDMLESHHTNLRRVTYLVLDEADRMLDMGFDPQIRKIVSQIRPDRQTLYWSATWPKEVEQLARQFLYNPYKVVIGSADLKANHAIRQHVDIVSENQKYNKLVKLLEDIMDGSRILIFMDTKKGCDQITRQLRMDGWPALSIHGDKSQAERDWVLSEFKAGKSPIMTATDVAARGLDVKDVKFVINYDFPGSLEDYVHRIGRTGRAGAKGTAYTFFTASNARFAKELISILEEAGQKVSPELAAMGRGAPPPPS 486

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BLAST of g.arboreum_cottongen_reftransV1_0013834 vs. ExPASy TrEMBL
Match: A0A067L0P3_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_24777 PE=3 SV=1)

HSP 1 Score: 860.907 bits (2223), Expect = 0.000e+0
Identity = 466/505 (92.28%), Postives = 483/505 (95.64%), Query Frame = 1

Query:  205 MSRYDSRSGDPASYRDRRXXXXXXXXXXXXXXXXXXXXRKDYDAGEPPRKLDLDGLTPFEKNFYVESPSVAAMSEMEVEEYRQKREITVEGRDVPKPVKSFADVRFPDYVLQEVMKAGFVEPTAIQAQGWPMALKGRDLIGIAETGSGKTLAYLLPAIVHVNAQPILAPGDGPIVLVLAPTRELAVQIQQEAAKFGASSRIKNTCIYGGVPKGPQVRDLQKGVEIVIATPGRLIDMLDSHHTNLRRVTYLVLDEADRMLDMGFEPQIRKIVSQIRPDRQTLYWSATWPKEVEQLARQFLYNPYKVIIGSADLKANHAIRQHVNIVSESQKYNKLVKLLEDIMDGSRILIFMDTKKGCDQITRQLRMDGWPALSIHGDKSQAERDWVLSEFKAGKSPIMTATDVAARGLDVKDVKYVINYDFPGSLEDYVHXXXXXXXXXXXXXXXXFFTAANARFAKELIAILEEAGQKVSPELAAMGRGAPPPPSGHGGFRDRGKGYSGGRTWS 1719
            MSRYDSRSGDP SYRDRRSDSGFGG S Y GS RS S R+DY A + PRK DLDGLTPFEKNFY+ESPSVAAMSE EV+EYRQ+REITVEGRDVPKPVKSF D+ FP+YVLQE+ KAGFVEPT IQAQGWPMALKGRDLIGIAETGSGKTLAYLLPAIVHVNAQPILAPGDGPIVLVLAPTRE AVQIQQEAAKFGASSRIKNTCIYGGVPKGPQVRDLQKGVEIVIATPGRLIDML+SHHTNLRRVTYLVLDEADRMLDMGFEPQIRKIVSQIRPDRQTLYWSATWPKEVEQLARQFLYNPYKVIIGS DLKANHAIRQHV+IVSE+QKYNKLVKLLEDIMDGSRILIFMDTKKGCDQITRQLRMDGWPALS+HGDKSQAERDWVLSEFKAGKSPIMTATDVAARGLDVKDVKYVINYDFPGSLEDYVHRIGRTGRAGAKGTAYTFFTA+NARFAKELI ILEEAGQKVSPELAAMGRGAPPPP G+G FR+RG+GY GGR+WS
Sbjct:    1 MSRYDSRSGDPTSYRDRRSDSGFGGGSVYSGSARSSSERRDYGA-DSPRKSDLDGLTPFEKNFYIESPSVAAMSEREVDEYRQRREITVEGRDVPKPVKSFRDMGFPEYVLQEITKAGFVEPTPIQAQGWPMALKGRDLIGIAETGSGKTLAYLLPAIVHVNAQPILAPGDGPIVLVLAPTREHAVQIQQEAAKFGASSRIKNTCIYGGVPKGPQVRDLQKGVEIVIATPGRLIDMLESHHTNLRRVTYLVLDEADRMLDMGFEPQIRKIVSQIRPDRQTLYWSATWPKEVEQLARQFLYNPYKVIIGSPDLKANHAIRQHVDIVSENQKYNKLVKLLEDIMDGSRILIFMDTKKGCDQITRQLRMDGWPALSLHGDKSQAERDWVLSEFKAGKSPIMTATDVAARGLDVKDVKYVINYDFPGSLEDYVHRIGRTGRAGAKGTAYTFFTASNARFAKELITILEEAGQKVSPELAAMGRGAPPPP-GYGSFRERGRGYGGGRSWS 503

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BLAST of g.arboreum_cottongen_reftransV1_0013834 vs. ExPASy TrEMBL
Match: F6HY13_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_09s0002g02100 PE=3 SV=1)

HSP 1 Score: 857.055 bits (2213), Expect = 0.000e+0
Identity = 451/514 (87.74%), Postives = 476/514 (92.61%), Query Frame = 1

Query:  205 MSRYDSRSGDPASYRDRRXXXXXXXXXXXXXXXXXXXX-RKDYDAGEPPRKLDLDGLTPFEKNFYVESPSVAAMSEMEVEEYRQKREITVEGRDVPKPVKSFADVRFPDYVLQEVMKAGFVEPTAIQAQGWPMALKGRDLIGIAETGSGKTLAYLLPAIVHVNAQPILAPGDGPIVLVLAPTRELAVQIQQEAAKFGASSRIKNTCIYGGVPKGPQVRDLQKGVEIVIATPGRLIDMLDSHHTNLRRVTYLVLDEADRMLDMGFEPQIRKIVSQIRPDRQTLYWSATWPKEVEQLARQFLYNPYKVIIGSADLKANHAIRQHVNIVSESQKYNKLVKLLEDIMDGSRILIFMDTKKGCDQITRQLRMDGWPALSIHGDKSQAERDWVLSEFKAGKSPIMTATDVAARGLDVKDVKYVINYDFPGSLEDYVHXXXXXXXXXXXXXXXXFFTAANARFAKELIAILEEAGQKVSPELAAMGRGAPPPPSG---------HGGFRDRGKGYSGGRTW 1716
            MSRYD RSGDP SYRDRRS+SGFGGAS YG  G   SS ++D D  E PRK DLDGLTPFEKNFYVESP+VAAMSE EVE+YR++REITVEGRDVPKPV +F DV  P+YV+QE+ KAGF EPT IQAQGWPMALKGRD+IGIAETGSGKTLAYLLPAI+HVNAQPILAPGDGPIVLVLAPTRELAVQIQQEAAKFGASSRIKNTCI+GGVPKGPQ+RDLQKGVEIVIATPGRLIDML+SHHTNLRRVTYLVLDEADRMLDMGFEPQIRKIVSQIRPDRQTLYWSATWPKEVEQLAR+FLYNP KV+IGSADLKANHAIRQHV IVSE+QKYN+LVKLLEDIMDG RILIFMDTKKGCDQITRQLRMDGWPALSIHGDKSQAERDWVLSEFKAGKSPIMTATDVAARGLDVKDVK+VINYDFPGSLEDYVHRIGRTGRAGAKGTAYTFFTAANARFAKELI ILEEAGQ+V+PELAAMGRGAPPPPSG         HGGFRDRG+G+  GR W
Sbjct:    1 MSRYDGRSGDPGSYRDRRSESGFGGASGYGSGGVRSSSSKRDLDGVESPRKPDLDGLTPFEKNFYVESPAVAAMSEKEVEQYRERREITVEGRDVPKPVMNFRDVGLPEYVMQEITKAGFAEPTPIQAQGWPMALKGRDVIGIAETGSGKTLAYLLPAIIHVNAQPILAPGDGPIVLVLAPTRELAVQIQQEAAKFGASSRIKNTCIHGGVPKGPQIRDLQKGVEIVIATPGRLIDMLESHHTNLRRVTYLVLDEADRMLDMGFEPQIRKIVSQIRPDRQTLYWSATWPKEVEQLARKFLYNPCKVVIGSADLKANHAIRQHVEIVSENQKYNRLVKLLEDIMDGGRILIFMDTKKGCDQITRQLRMDGWPALSIHGDKSQAERDWVLSEFKAGKSPIMTATDVAARGLDVKDVKFVINYDFPGSLEDYVHRIGRTGRAGAKGTAYTFFTAANARFAKELITILEEAGQRVAPELAAMGRGAPPPPSGQLDSPPAQRHGGFRDRGRGHGSGRAW 514

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BLAST of g.arboreum_cottongen_reftransV1_0013834 vs. ExPASy Swiss-Prot
Match: DBP2_CANGA (ATP-dependent RNA helicase DBP2 OS=Candida glabrata (strain ATCC 2001 / CBS 138 / JCM 3761 / NBRC 0622 / NRRL Y-65) GN=DBP2 PE=3 SV=1)

HSP 1 Score: 567.385 bits (1461), Expect = 0.000e+0
Identity = 298/494 (60.32%), Postives = 363/494 (73.48%), Query Frame = 1

Query:  187 RTAAHKMSRYDSRSGDPASYRDRRXXXXXXXXXXXXXXXXXXXXRKDYDAGEPPRKL-------DLDGLTPFEKNFYVESPSVAAMSEMEVEEYRQKREITVEGRDVPKPVKSFADVRFPDYVLQEVMKAGFVEPTAIQAQGWPMALKGRDLIGIAETGSGKTLAYLLPAIVHVNAQPILAPGDGPIVLVLAPTRELAVQIQQEAAKFGASSRIKNTCIYGGVPKGPQVRDLQKGVEIVIATPGRLIDMLDSHHTNLRRVTYLVLDEADRMLDMGFEPQIRKIVSQIRPDRQTLYWSATWPKEVEQLARQFLYNPYKVIIGSADLKANHAIRQHVNIVSESQKYNKLVKLLEDIMDG--SRILIFMDTKKGCDQITRQLRMDGWPALSIHGDKSQAERDWVLSEFKAGKSPIMTATDVAARGLDVKDVKYVINYDFPGSLEDYVHXXXXXXXXXXXXXXXXFFTAANARFAKELIAILEEAGQKVSPELAAMGR 1641
            R A +  + Y+SR GD   +R  RS                   R  +D G  PR+L       +L  L PFEKNFYVE   V   S+ EV ++R++ E+T+ G D+PKP+ +F +  FPDYVL+EV   GF +PT+IQ QGWPMAL GRD++GIA TGSGKTL+Y LP IVH+NAQP+L+PGDGPIVLVLAPTRELAVQIQ+E +KFG SSRI+NTC+YGGVP+G Q+R+L +G EIVIATPGRLIDML++  TNL+RVTYLVLDEADRMLDMGFEPQIRKIV QIRPDRQTL WSATWPKEV+QLAR +L +P +V IGS +L A+H I Q V +VSE +K ++LVK L+       S+ILIF  TK+ CD+IT  LR DGWPAL+IHGDK Q ERDWVL+EF+ G SPIM ATDVAARG+DVK + +V+NYD PG++EDYVHRIGRTGRAGA GTA +FFT  N      LI+I+ EA Q +  EL    R
Sbjct:    4 RDALYNKTNYNSRGGD---FRGGRSSDRNDYNRDRNQGYSHGGLRGRHDDG--PRELIKPDWESELPNLPPFEKNFYVEHEVVRNRSDQEVAQFRKESEMTITGHDIPKPITTFDEAGFPDYVLKEVKAEGFDKPTSIQCQGWPMALSGRDMVGIAATGSGKTLSYCLPGIVHINAQPLLSPGDGPIVLVLAPTRELAVQIQKECSKFGKSSRIRNTCVYGGVPRGQQIRELIRGAEIVIATPGRLIDMLEAGKTNLKRVTYLVLDEADRMLDMGFEPQIRKIVDQIRPDRQTLMWSATWPKEVQQLARDYLNDPIQVQIGSLELAASHNITQLVEVVSEFEKRDRLVKHLDTASQDKESKILIFASTKRTCDEITSYLRQDGWPALAIHGDKDQRERDWVLNEFRTGNSPIMVATDVAARGIDVKGINFVVNYDMPGNIEDYVHRIGRTGRAGATGTAISFFTEDNKSLGASLISIMREAKQNIPEELMKYDR 492

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BLAST of g.arboreum_cottongen_reftransV1_0013834 vs. ExPASy Swiss-Prot
Match: DBP2_CANAL (ATP-dependent RNA helicase DBP2 OS=Candida albicans (strain SC5314 / ATCC MYA-2876) GN=DBP2 PE=3 SV=2)

HSP 1 Score: 567.385 bits (1461), Expect = 0.000e+0
Identity = 282/432 (65.28%), Postives = 340/432 (78.70%), Query Frame = 1

Query:  352 KLDLDGLTPFEKNFYVESPSVAAMSEMEVEEYRQKREITVEGRDVPKPVKSFADVRFPDYVLQEVMKAGFVEPTAIQAQGWPMALKGRDLIGIAETGSGKTLAYLLPAIVHVNAQPILAPGDGPIVLVLAPTRELAVQIQQEAAKFGASSRIKNTCIYGGVPKGPQVRDLQKGVEIVIATPGRLIDMLDSHHTNLRRVTYLVLDEADRMLDMGFEPQIRKIVSQIRPDRQTLYWSATWPKEVEQLARQFLYNPYKVIIGSADLKANHAIRQHVNIVSESQKYNKLVKLLEDIMD--GSRILIFMDTKKGCDQITRQLRMDGWPALSIHGDKSQAERDWVLSEFKAGKSPIMTATDVAARGLDVKDVKYVINYDFPGSLEDYVHXXXXXXXXXXXXXXXXFFTAANARFAKELIAILEEAGQKVSPELAAMGR 1641
            + DL+ L  FEKNFY E P VAA S+ ++E++R++ E+TV+G D+P P+ +F +  FPDYVLQEV   GF +PT IQ QGWPMAL GRD+IGIA TGSGKTL+Y LP+IVH+NAQP L  GDGPIVLVLAPTRELAVQIQ E +KFG SSRI+NTC+YGG PKGPQ+RDL +GVEI IATPGRLIDML++  TNL+RVTYLVLDEADRMLDMGFEPQIRKIV QIRPDRQTL WSATWPKEV+QL R +L +P +V IGS +L A+H I Q V ++ E  K ++LVK LE  ++   ++IL+F  TK+ CD+IT  LR DGWPAL+IHGDK Q ERDWVL EF+ GK+ IM ATDVAARG+DVK + +VINYD PG++EDYVHRIGRTGR GA GTA +FFT  N++   +L  I+ EA Q V PEL    R
Sbjct:   78 QWDLEQLPKFEKNFYSEHPDVAARSDRDIEQFRKENEMTVKGHDIPHPITTFDEAGFPDYVLQEVKDQGFPKPTPIQCQGWPMALSGRDMIGIAATGSGKTLSYCLPSIVHINAQPQLQYGDGPIVLVLAPTRELAVQIQTECSKFGKSSRIRNTCVYGGAPKGPQIRDLARGVEICIATPGRLIDMLEAGKTNLKRVTYLVLDEADRMLDMGFEPQIRKIVDQIRPDRQTLMWSATWPKEVQQLTRDYLNDPIQVTIGSLELAASHTITQLVEVIDEFSKRDRLVKHLESALNEKDNKILVFASTKRTCDEITTYLRSDGWPALAIHGDKEQNERDWVLDEFRKGKTSIMVATDVAARGIDVKGITHVINYDMPGNIEDYVHRIGRTGRGGASGTAISFFTEGNSKLGGDLCKIMREANQTVPPELQRFDR 509

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BLAST of g.arboreum_cottongen_reftransV1_0013834 vs. ExPASy Swiss-Prot
Match: DBP2_CRYNJ (ATP-dependent RNA helicase DBP2-A OS=Cryptococcus neoformans var. neoformans serotype D (strain JEC21 / ATCC MYA-565) GN=DBP2 PE=3 SV=1)

HSP 1 Score: 564.688 bits (1454), Expect = 0.000e+0
Identity = 275/424 (64.86%), Postives = 347/424 (81.84%), Query Frame = 1

Query:  370 LTPFEKNFYVESPSVAAMSEMEVEEYRQKREITVEGRDVPKPVKSFADVRFPDYVLQEVMKAGFVEPTAIQAQGWPMALKGRDLIGIAETGSGKTLAYLLPAIVHVNAQPILAPGDGPIVLVLAPTRELAVQIQQEAAKFGASSRIKNTCIYGGVPKGPQVRDLQKGVEIVIATPGRLIDMLDSHHTNLRRVTYLVLDEADRMLDMGFEPQIRKIVSQIRPDRQTLYWSATWPKEVEQLARQFLYNPYKVIIGSADLKANHAIRQHVNIVSESQKYNKLVKLLEDI-MDGSRILIFMDTKKGCDQITRQLRMDGWPALSIHGDKSQAERDWVLSEFKAGKSPIMTATDVAARGLDVKDVKYVINYDFPGSLEDYVHXXXXXXXXXXXXXXXXFFTAANARFAKELIAILEEAGQKVSPELAAMG 1638
            L  FEKNFYV+ P V A S+ EVE +R ++E+ ++G++VP+P+ +F +  FPDY++ E+ + GF  P++IQ Q WPMAL GRDL+ IAETGSGKT+++ LPA+VH+NAQP+LAPGDGPIVL+LAPTRELAVQIQ EA KFG SSRI+NT IYGG PKGPQ+RDLQ+GVEI +ATPGRLIDML++  TNL+RVTYLV+DEADRMLDMGFEPQIRKIVSQIRPDRQTL +SATWPKEV++LA  FL++  +V IGS DL ANH + QHV + ++  K +KL+  LE I  +  ++LIF+ TK+  D +T+ LRMDGWPAL+IHGDK QAERDWVL+EFK+G+SPIM ATDVA+RGLDV+D+ YVINYDFP + EDY+HRIGRTGRAG KGT+YT+FT  N++ A+EL+ IL E+   + PEL  M 
Sbjct:   67 LAKFEKNFYVQDPRVTARSDAEVEAFRAEKEMKIQGKNVPRPITTFEEAGFPDYIMSEIRRMGFTAPSSIQCQAWPMALSGRDLVAIAETGSGKTISFCLPAMVHINAQPLLAPGDGPIVLILAPTRELAVQIQTEATKFGQSSRIRNTAIYGGAPKGPQIRDLQRGVEICVATPGRLIDMLETGKTNLKRVTYLVMDEADRMLDMGFEPQIRKIVSQIRPDRQTLLFSATWPKEVQRLAMDFLHDFIQVNIGSLDLTANHNVAQHVEVCTDFDKRSKLLSHLEKISQENGKVLIFVATKRVADDLTKFLRMDGWPALAIHGDKQQAERDWVLAEFKSGRSPIMLATDVASRGLDVRDIGYVINYDFPNNCEDYIHRIGRTGRAGRKGTSYTYFTMDNSKAARELVQILRESKADIPPELEEMA 490

[Close]

BLAST of g.arboreum_cottongen_reftransV1_0013834 vs. ExPASy Swiss-Prot
Match: DBP2_CRYNB (ATP-dependent RNA helicase DBP2-A OS=Cryptococcus neoformans var. neoformans serotype D (strain B-3501A) GN=DBP2 PE=3 SV=1)

HSP 1 Score: 564.688 bits (1454), Expect = 0.000e+0
Identity = 275/424 (64.86%), Postives = 347/424 (81.84%), Query Frame = 1

Query:  370 LTPFEKNFYVESPSVAAMSEMEVEEYRQKREITVEGRDVPKPVKSFADVRFPDYVLQEVMKAGFVEPTAIQAQGWPMALKGRDLIGIAETGSGKTLAYLLPAIVHVNAQPILAPGDGPIVLVLAPTRELAVQIQQEAAKFGASSRIKNTCIYGGVPKGPQVRDLQKGVEIVIATPGRLIDMLDSHHTNLRRVTYLVLDEADRMLDMGFEPQIRKIVSQIRPDRQTLYWSATWPKEVEQLARQFLYNPYKVIIGSADLKANHAIRQHVNIVSESQKYNKLVKLLEDI-MDGSRILIFMDTKKGCDQITRQLRMDGWPALSIHGDKSQAERDWVLSEFKAGKSPIMTATDVAARGLDVKDVKYVINYDFPGSLEDYVHXXXXXXXXXXXXXXXXFFTAANARFAKELIAILEEAGQKVSPELAAMG 1638
            L  FEKNFYV+ P V A S+ EVE +R ++E+ ++G++VP+P+ +F +  FPDY++ E+ + GF  P++IQ Q WPMAL GRDL+ IAETGSGKT+++ LPA+VH+NAQP+LAPGDGPIVL+LAPTRELAVQIQ EA KFG SSRI+NT IYGG PKGPQ+RDLQ+GVEI +ATPGRLIDML++  TNL+RVTYLV+DEADRMLDMGFEPQIRKIVSQIRPDRQTL +SATWPKEV++LA  FL++  +V IGS DL ANH + QHV + ++  K +KL+  LE I  +  ++LIF+ TK+  D +T+ LRMDGWPAL+IHGDK QAERDWVL+EFK+G+SPIM ATDVA+RGLDV+D+ YVINYDFP + EDY+HRIGRTGRAG KGT+YT+FT  N++ A+EL+ IL E+   + PEL  M 
Sbjct:   67 LAKFEKNFYVQDPRVTARSDAEVEAFRAEKEMKIQGKNVPRPITTFEEAGFPDYIMSEIRRMGFTAPSSIQCQAWPMALSGRDLVAIAETGSGKTISFCLPAMVHINAQPLLAPGDGPIVLILAPTRELAVQIQTEATKFGQSSRIRNTAIYGGAPKGPQIRDLQRGVEICVATPGRLIDMLETGKTNLKRVTYLVMDEADRMLDMGFEPQIRKIVSQIRPDRQTLLFSATWPKEVQRLAMDFLHDFIQVNIGSLDLTANHNVAQHVEVCTDFDKRSKLLSHLEKISQENGKVLIFVATKRVADDLTKFLRMDGWPALAIHGDKQQAERDWVLAEFKSGRSPIMLATDVASRGLDVRDIGYVINYDFPNNCEDYIHRIGRTGRAGRKGTSYTYFTMDNSKAARELVQILRESKADIPPELEEMA 490

[Close]

BLAST of g.arboreum_cottongen_reftransV1_0013834 vs. ExPASy Swiss-Prot
Match: DBP2_GIBZE (ATP-dependent RNA helicase DBP2 OS=Gibberella zeae (strain PH-1 / ATCC MYA-4620 / FGSC 9075 / NRRL 31084) GN=DBP2 PE=3 SV=1)

HSP 1 Score: 561.992 bits (1447), Expect = 0.000e+0
Identity = 279/436 (63.99%), Postives = 349/436 (80.05%), Query Frame = 1

Query:  334 AGEPPRKLDLDGLTPFEKNFYVESPSVAAMSEMEVEEYRQKREITVEGRDVPKPVKSFADVRFPDYVLQEVMKAGFVEPTAIQAQGWPMALKGRDLIGIAETGSGKTLAYLLPAIVHVNAQPILAPGDGPIVLVLAPTRELAVQIQQEAAKFGASSRIKNTCIYGGVPKGPQVRDLQKGVEIVIATPGRLIDMLDSHHTNLRRVTYLVLDEADRMLDMGFEPQIRKIVSQIRPDRQTLYWSATWPKEVEQLARQFLYNPYKVIIGSADLKANHAIRQHVNIVSESQKYNKLVKLLEDIMDG--SRILIFMDTKKGCDQITRQLRMDGWPALSIHGDKSQAERDWVLSEFKAGKSPIMTATDVAARGLDVKDVKYVINYDFPGSLEDYVHXXXXXXXXXXXXXXXXFFTAANARFAKELIAILEEAGQKVSPELAAM 1635
            +G   ++ D++ L  FEK+FY E P V   S+ +VE +R+K ++T+ G +VPKPV++F +  FP YV+ EV   GF  PTAIQ+QGWPMAL GRD++GIAETGSGKTL Y LP+IVH+NAQP+LAPGDGPIVLVLAPTRELAVQIQ+E  KFG SSRI+NTC+YGGVPKGPQ+RDL +GVE+ IATPGRLIDML++  TNLRRVTYLVLDEADRMLDMGFEPQIRKI+ QIRPDRQTL WSATWPKEV  LA  FL +  +V IGS +L ANH I Q V +V+E +K ++++K +E +M+   ++ILIF+ TK+  D+ITR LR DGWPALSIHGDK Q ERDWVL +FK GKSPIM ATDVA+RG+DV+++ +V+NYD+P + EDY+HRIGRTGRAGA GTA T FT  N + A++L+ +L+EA Q++ P L  M
Sbjct:   79 SGLKNQEWDINSLPKFEKSFYKEHPDVETRSDADVEAFRRKHQMTIAGSNVPKPVETFDEAGFPRYVMDEVKAQGFPAPTAIQSQGWPMALSGRDVVGIAETGSGKTLTYCLPSIVHINAQPLLAPGDGPIVLVLAPTRELAVQIQEEMKKFGRSSRIRNTCVYGGVPKGPQIRDLSRGVEVCIATPGRLIDMLEAGKTNLRRVTYLVLDEADRMLDMGFEPQIRKIIGQIRPDRQTLMWSATWPKEVRALASDFLQDFIQVNIGSMELAANHRITQIVEVVTEMEKRDRMIKHMEKVMENKENKILIFVGTKRVADEITRFLRQDGWPALSIHGDKQQNERDWVLDQFKTGKSPIMVATDVASRGIDVRNITHVLNYDYPNNSEDYIHRIGRTGRAGAMGTAITLFTTDNQKQARDLVNVLQEAKQQIDPRLVEM 514

The following BLAST results are available for this feature:

BLAST of g.arboreum_cottongen_reftransV1_0013834 vs. ExPASy TrEMBL
BLAST of g.arboreum_cottongen_reftransV1_0013834 vs. ExPASy Swiss-Prot

BLAST of g.arboreum_cottongen_reftransV1_0013834 vs. ExPASy TrEMBL
Analysis Date: 2016-11-15 (Homology Analysis for Gossypium arboreum CottonGen RefTrans V1 vs TrEMBL)
Total hits: 25


Match Name	E-value	Identity	Description
A0A0D2UPY7_GOSRA	0.000e+0	97.82	Uncharacterized protein OS=Gossypium raimondii GN=...	[more]
A0A0B0MHH3_GOSAR	0.000e+0	96.15	DEAD-box ATP-dependent RNA helicase 20-like protei...	[more]
A0A0B0PIE4_GOSAR	0.000e+0	95.84	DEAD-box ATP-dependent RNA helicase 20-like protei...	[more]
A0A0D2TPW0_GOSRA	0.000e+0	95.05	Uncharacterized protein OS=Gossypium raimondii GN=...	[more]
A0A061GD47_THECC	0.000e+0	94.62	DEA(D/H)-box RNA helicase family protein OS=Theobr...	[more]
A0A0D2ULQ3_GOSRA	0.000e+0	95.07	Uncharacterized protein OS=Gossypium raimondii GN=...	[more]
B9MWR8_POPTR	0.000e+0	88.71	DEAD box RNA helicase family protein OS=Populus tr...	[more]
B9SN43_RICCO	0.000e+0	94.24	Dead box ATP-dependent RNA helicase, putative OS=R...	[more]
A0A067L0P3_JATCU	0.000e+0	92.28	Uncharacterized protein OS=Jatropha curcas GN=JCGZ...	[more]
F6HY13_VITVI	0.000e+0	87.74	Putative uncharacterized protein OS=Vitis vinifera...	[more]

Pages

BLAST of g.arboreum_cottongen_reftransV1_0013834 vs. ExPASy Swiss-Prot
Analysis Date: 2016-11-15 (Homology Analysis for Gossypium arboreum CottonGen RefTrans V1 vs SwissProt)
Total hits: 25


Match Name	E-value	Identity	Description
DBP2_CANGA	0.000e+0	60.32	ATP-dependent RNA helicase DBP2 OS=Candida glabrat...	[more]
DBP2_CANAL	0.000e+0	65.28	ATP-dependent RNA helicase DBP2 OS=Candida albican...	[more]
DBP2_CRYNJ	0.000e+0	64.86	ATP-dependent RNA helicase DBP2-A OS=Cryptococcus ...	[more]
DBP2_CRYNB	0.000e+0	64.86	ATP-dependent RNA helicase DBP2-A OS=Cryptococcus ...	[more]
DBP2_GIBZE	0.000e+0	63.99	ATP-dependent RNA helicase DBP2 OS=Gibberella zeae...	[more]

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InterPro

Analysis Name: InterProScan analysis for Gossypium arboreum CottonGen RefTrans V1
Date Performed: 2016-11-14


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR014001	Helicase superfamily 1/2, ATP-binding domain	SMART	SM00487	ultradead3	coord: 118..321 e-value: 2.4E-68 score: 243.0
IPR014001	Helicase superfamily 1/2, ATP-binding domain	PROSITE	PS51192	HELICASE_ATP_BIND_1	coord: 130..305 score: 33.408
IPR001650	Helicase, C-terminal	SMART	SM00490	helicmild6	coord: 358..439 e-value: 4.8E-34 score: 129.1
IPR001650	Helicase, C-terminal	PFAM	PF00271	Helicase_C	coord: 330..439 e-value: 1.5E-29 score: 102.4
IPR001650	Helicase, C-terminal	PROSITE	PS51194	HELICASE_CTER	coord: 333..478 score: 23.963
IPR027417	P-loop containing nucleoside triphosphate hydrolase	GENE3D	3.40.50.300		coord: 321..476 e-value: 9.9E-60 score: 200.1
IPR027417	P-loop containing nucleoside triphosphate hydrolase	GENE3D	3.40.50.300		coord: 80..320 e-value: 2.3E-91 score: 304.6
IPR027417	P-loop containing nucleoside triphosphate hydrolase	SUPERFAMILY	52540	P-loop containing nucleoside triphosphate hydrolases	coord: 171..454
IPR011545	DEAD/DEAH box helicase domain	PFAM	PF00270	DEAD	coord: 123..294 e-value: 4.2E-49 score: 166.5
None	No IPR available	PANTHER	PTHR24031	RNA HELICASE	coord: 7..477
None	No IPR available	PANTHER	PTHR24031:SF219	ATP-DEPENDENT RNA HELICASE DDX5-RELATED	coord: 7..477
IPR000629	ATP-dependent RNA helicase DEAD-box, conserved site	PROSITE	PS00039	DEAD_ATP_HELICASE	coord: 251..259
IPR014014	RNA helicase, DEAD-box type, Q motif	PROSITE	PS51195	Q_MOTIF	coord: 99..127 score: 10.209

Sequences

The following sequences are available for this feature:

contig sequence

contig sequence

>g.arboreum_cottongen_reftransV1_0013834 ID=g.arboreum_cottongen_reftransV1_0013834; Name=g.arboreum_cottongen_reftransV1_0013834; organism=Gossypium arboreum; type=contig; length=1987bp
GGAAAATTTTTCCCTTTCTCTTAACTTCTTTTCCTCCCAATTGAAACCAA
AAAGGAGAGGGACAAAGCTCCATCGAGTAAAACCCTGACACATAAAAACC
CTAATTAATTAGAACAAGGCCAAACGATAACACGAATTCTTTTTTTCGGT
TACATTGACATTTATATTAACTTTTGATCATTTCTACGGACAGCAGCACA
TAAAATGAGTAGATATGATAGCCGCTCCGGCGATCCTGCCTCCTACCGTG
ACCGTAGAAGTGACTCAGGGTTTGGTGGGGCTTCAGCATATGGTGGTTCA
GGGCGGTCCTTGTCAAGCAGAAAGGACTATGATGCTGGTGAACCACCTAG
GAAGTTGGATTTGGATGGCTTGACACCATTTGAAAAGAATTTTTATGTTG
AGTCTCCTTCTGTGGCAGCAATGTCTGAGATGGAGGTGGAGGAATATCGA
CAGAAGAGGGAAATTACGGTTGAAGGTCGTGATGTTCCAAAGCCTGTGAA
GAGTTTTGCTGATGTGAGATTTCCAGACTATGTACTGCAAGAAGTCATGA
AAGCAGGGTTTGTTGAACCAACAGCCATACAAGCTCAAGGCTGGCCAATG
GCTTTAAAGGGCCGTGATCTTATTGGTATTGCTGAAACAGGATCAGGGAA
GACCCTTGCCTATTTATTGCCTGCAATTGTTCACGTCAACGCACAACCAA
TTTTAGCTCCTGGAGATGGTCCAATTGTATTAGTATTAGCTCCCACACGT
GAACTTGCAGTTCAAATACAACAGGAGGCTGCTAAGTTTGGTGCGTCATC
AAGGATCAAGAATACATGCATATATGGTGGGGTTCCAAAGGGACCTCAAG
TGCGTGATCTCCAGAAAGGTGTTGAGATTGTTATTGCTACACCAGGAAGG
TTAATAGATATGTTGGATTCACATCACACAAATCTGCGAAGAGTTACTTA
TTTAGTCTTGGATGAGGCAGATCGGATGTTAGACATGGGGTTTGAGCCTC
AGATACGAAAAATTGTTTCTCAGATACGTCCTGATCGTCAAACTTTATAC
TGGAGTGCAACTTGGCCAAAGGAGGTTGAACAATTGGCAAGGCAGTTTCT
TTACAATCCGTACAAAGTGATAATTGGATCTGCGGATTTAAAAGCTAACC
ATGCAATTCGCCAACATGTTAACATTGTTTCAGAGAGTCAGAAATATAAC
AAATTGGTGAAGCTGCTCGAGGATATCATGGATGGCAGCAGAATTTTGAT
TTTCATGGATACCAAGAAGGGTTGTGACCAAATCACTAGGCAACTTCGCA
TGGATGGTTGGCCTGCTCTGTCAATTCATGGAGATAAAAGTCAAGCAGAA
AGGGATTGGGTCCTTTCAGAGTTTAAAGCTGGCAAGAGCCCTATAATGAC
TGCAACAGATGTTGCAGCTCGTGGTTTAGATGTGAAAGATGTGAAGTATG
TAATCAATTATGACTTCCCGGGATCTCTCGAGGATTATGTCCATCGCATT
GGTCGAACAGGGAGGGCTGGGGCAAAAGGAACAGCCTATACTTTCTTCAC
AGCTGCAAATGCAAGATTTGCCAAAGAACTTATTGCCATACTTGAGGAAG
CTGGCCAGAAGGTCAGTCCTGAATTGGCAGCAATGGGACGCGGTGCACCT
CCTCCCCCATCAGGTCATGGTGGTTTTCGAGACCGAGGTAAGGGATACAG
TGGCGGTCGCACATGGAGCTGATTAACAGAAAGATCCCTGTTCCCCAGAA
GAGGAAAATTAGAAAGACTATGAGGGTACAGTGTAGTGTAGACATACTTT
GTTTAACTGTCACTACCCGCAGGAAGGGCAAGTAGATGGGGAACTTGTAA
ATTGACAGTGTATGTACTCCCAGATTAAAAGTCCGATTCCCCCTTAAGCA
ATGAGAACTCAACTCGTGAATGAAAAACAAAACAAAAATGAGTTGCATTT
TTCCACTTCATTCCAAAGCTGATCATGTTTTTTTTTT

Annotated Terms

The following terms have been associated with this contig:

Vocabulary: **INTERPRO**
Term	Definition
IPR014001	Helicase_ATP-bd
IPR001650	Helicase_C-like
IPR027417	P-loop_NTPase
IPR011545	DEAD/DEAH_box_helicase_dom
IPR000629	RNA-helicase_DEAD-box_CS
IPR014014	RNA_helicase_DEAD_Q_motif

Vocabulary: **Molecular Function**
Term	Definition
GO:0003676	nucleic acid binding
GO:0005524	ATP binding

Search form

g.arboreum_cottongen_reftransV1_0013834, g.arboreum_cottongen_reftransV1_0013834 (contig) Gossypium arboreum

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