g.arboreum_cottongen_reftransV1_0001675, g.arboreum_cottongen_reftransV1_0001675 (contig) Gossypium arboreum

Overview
Nameg.arboreum_cottongen_reftransV1_0001675
Unique Nameg.arboreum_cottongen_reftransV1_0001675
Typecontig
OrganismGossypium arboreum (Tree cotton)
Sequence length1896
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Chr1chromosomeg.arboreum_cottongen_reftransV1_0001675:1..1896 .
Chr1:110649042..110652546 -
Homology
BLAST of g.arboreum_cottongen_reftransV1_0001675 vs. ExPASy TrEMBL
Match: A0A061EE08_THECC (TPX2 family protein, putative isoform 5 OS=Theobroma cacao GN=TCM_017060 PE=4 SV=1)

HSP 1 Score: 462.996 bits (1190), Expect = 5.220e-154
Identity = 261/417 (62.59%), Postives = 290/417 (69.54%), Query Frame = -3
Query:  674 MGDSTCLMQPFSYTAGLPNEAKEGNPIHGLGQSISFGRYMSESLAWEKWSTFSHNKYVEEAERYARPGSVAQKKAFFEAHY-------------KXXXXXXXXXXXXXXXXXXXXXXXXXXXXNPNPRM-----------AETGSIYDCKENNSEFVKVQSS------SVDEPQVLLENNMKNEAFEKNGVVVDKAEITDLEVKETTQVKNNCVKANQSRLLGDDKELELSEGTQMEKPLLKGGKTNEDEFEVTSKMKPSQSSSKVFANARTSKMPSSPAKFKAPLRPNNGNNLTPMTKKSAMDISERKRSTPKSSHKSINFTHAKEFSKFTSTIIRKIDGSRIDSNSKASKECPTPLRTPNQVSISGKPKQSSATPWSENQSARTPVNSSASVSKTARGKWNFLPTDCSKILSACR 1834
            MG+S CLMQPFSYTAG+PNEAKEGNP+HGLGQSISFGR+MSESLAWEKWSTFSHNKYVEEAERY+RPGSVAQKKAFFEAHY             +  AA  +A   E            SE  N N ++            + GSI+D KENNS+FVK +S       SV E  VLLEN MKNE+ E+   V DK  I D+E++ETTQV+  CVK +Q R L +  E ELSEGTQMEKPLLK   T++DEFEVTSK KP+ SSSKV A ARTSK+PSSPAKF AP RPN GNNLTPM KKSAMDIS+RKRSTPK SHKSINFT A EFSK TSTII+KIDGSRI SNSKASKEC TPLRTPN  S SG+PKQ SATPWSEN+S                         CSK LSACR
Sbjct:    1 MGESACLMQPFSYTAGIPNEAKEGNPVHGLGQSISFGRFMSESLAWEKWSTFSHNKYVEEAERYSRPGSVAQKKAFFEAHYKSLAARKAAALLEQANAAANSAKESEVEGGVHDITTQGSEMTNSNSQIPVLDQEVKAPSTKAGSIHDGKENNSDFVKFESGKVEGDDSVAEHHVLLENCMKNESIERKASV-DKVVIRDVELRETTQVEK-CVKVDQPRQLREIIESELSEGTQMEKPLLKSFNTSQDEFEVTSKKKPTHSSSKVSAYARTSKVPSSPAKFTAPTRPNKGNNLTPMAKKSAMDISDRKRSTPKPSHKSINFTPATEFSKITSTIIQKIDGSRIASNSKASKECATPLRTPNTASTSGRPKQPSATPWSENRS-------------------------CSKFLSACR 390          
BLAST of g.arboreum_cottongen_reftransV1_0001675 vs. ExPASy TrEMBL
Match: A0A067EMB1_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g009164mg PE=4 SV=1)

HSP 1 Score: 466.848 bits (1200), Expect = 6.382e-154
Identity = 297/554 (53.61%), Postives = 361/554 (65.16%), Query Frame = -3
Query:  203 MGDSTCLMQ-----PFSYTAGLPNEAKE-GNPIHGLGQSISFGRYMSESLAWEKWSTFS-HNKYVEEAERYARPGSVAQKKAFFEAHYKXXXXXXXXXXXXXXXXXXXXXXXXXXXXNPNPRMAETGSIYDCKENNSEFVKVQSSSVDEPQVLLENNMKNEAFEKNGVVVDKAEITDLEVKETTQVKNNCVKANQSRLLGDDKELELSEGTQMEKPLLK-GGKTNEDEFEVTSKMKPSQSSSKVFANARTSKMPSSPAKFKAPLRPNNGNNLTPMTKKSAMDISERKRSTPKSSHKSINFTHAKEFSKFTSTIIRKIDGSRI-DSNSKASKECPTPLRTPNQVSISGKPKQSSATPWSENQSARTPVNSSASVSKTARGKWNFLPTDCSKILSACRNKSQSPGIFASFNLRTEERAARRKQRLEEKFNVIQEQKVQQQTTLKEKAGTEFKKLRQSFCFKARPLPDFYKERT-PKDQIQKVPLTKPESPGIGRKSTPCKASIVESKSSVPPHRKSSIKNNCFMHVSEKKNRTSARSLASRIAMSAHENTSPNIQH 1834
            MG+STCLMQ     PFSY +G PNEAKE GNPIH LGQS+SFGR+MSESLAWEKWS+FS HNKYVEEAERY+RPGSVAQKKAFFEAHYK LAARK AA L +    A+ N    E+Q         G + +    +S+ + V+    +   +L+  +  N    +  V  +K E  + E  ++T      V  +  R   D K   LS   QM+KP LK    +N+D+    SK KPS SSSK     R +K PS+PAK  APL+     N TP+ KKSA+D ++ KRSTPKS HKSI  T A+E ++ TSTI+RKIDGS++  SNSKASK+C TPL TP   S++G PK   ATPWSEN+   TP +S+   SKT R +WNFLPTDCSK LSACRNK QSP  F  F LRTEERAARRK++LEEKFN  Q QK+Q+Q TLKEKA TE +KLRQ+ CFKARPLP FYKER  PK Q+ K P T+P+SP +        AS  ++K S P  R  + K+    HV EKK+  S RSLASR     HEN SPNIQH
Sbjct:    1 MGESTCLMQMQVQQPFSYVSGFPNEAKEEGNPIHALGQSVSFGRFMSESLAWEKWSSFSSHNKYVEEAERYSRPGSVAQKKAFFEAHYKELAARKKAAALLEQAQDASNNNLAGESQP-------EGEVENVTAQDSQTIAVEEQ--EAATILVHESESNSVLGQRSVDGEK-ETENCEKTKSTNQLERVVVVDSKREAKDSK---LSGANQMQKPRLKQSSNSNQDDRASMSKKKPSFSSSKSLNFGRATKTPSTPAKPTAPLQSTKEINATPIKKKSAIDFADNKRSTPKSIHKSIYLTPAREINRLTSTIVRKIDGSKVMGSNSKASKDCSTPLMTPTAASVNGAPKHPLATPWSENRRDGTPHDSNMG-SKTVRARWNFLPTDCSKFLSACRNKLQSPNSFTPFRLRTEERAARRKEKLEEKFNANQIQKLQKQVTLKEKAETEIRKLRQTLCFKARPLPHFYKERAIPKSQMNKDPPTRPQSPKLT-------ASTFQTKPSTPRQRPPT-KHIGSDHVLEKKSHASTRSLASRPTKITHENKSPNIQH 532          
BLAST of g.arboreum_cottongen_reftransV1_0001675 vs. ExPASy TrEMBL
Match: B9SLR7_RICCO (Putative uncharacterized protein OS=Ricinus communis GN=RCOM_0530870 PE=4 SV=1)

HSP 1 Score: 458.759 bits (1179), Expect = 9.172e-151
Identity = 294/570 (51.58%), Postives = 367/570 (64.39%), Query Frame = -3
Query:  203 MGDSTCLMQ--PFSYTAGLPNEAKEGNPIHGLGQSISFGRYMSESLAWEKWSTFSHNKYVEEAERYARPGSVAQKKAFFEAHYKXXXXXXXXXXXXXXXXXXXXXXXXXXXXNPNPRMAETGSIYDCKENNSEFVKVQSSSVDEPQ--VLLENNMKNEAFEKNGVVVDKAEITDLEVKETTQVKNNCVKANQSRLLG------DDKELELSEGTQMEKPLLKGGK--------------TNEDEFEVTSKMKPSQSSSKVFANARTSKMPSSPAKFKA-PLRPNNGNNLTPMTKKSAMDISERKRSTPKSSHKSINFTHAKEFSKFTSTIIRKIDGSRIDSNSKASKECPTPLRTPNQVSISGKPKQSSATPWSENQSARTPVNSSASVSKTARGKWNFLPTDCSKILSACRNKSQSPGIFASFNLRTEERAARRKQRLEEKFNVIQEQKVQQQTTLKEKAGTEFKKLRQSFCFKARPLPDFYKER-TPKDQIQKVPLTKPESPGIGRKSTPCKASIVESKSSVPPHRKSSIKNNCFMHVSEKKNRTSARSLASRIAMSAHENTSPNIQH 1834
            MG+ TCLMQ  PFSY AG+PN++ E NPIH LGQSISFGR+MSESLAWEKWS+FSHN+YVEEAER++RPGSVAQKKAFFEAHYK LAARKAAALLEQAN  A             P+  +   + D    +++        +D+P+  ++  +N  N   E       K E  D   ++   V++ C+K      +G      + KE ELS    MEKPLLK                 + ED     SK K + SSS +  + R SK+P SPAK  A P      NN TP++KK  ++  +RK++TP+S+HKS+NFT  +E +K TS IIRKID SR+ S+ K SK+C TPLRTP   S+  + K   ATP SEN+ A TP++ SAS +KT R KW+FLPTDCSK +SACRNKSQSP +   FNLRTEERAARRK+RLEEKFN  Q++KVQ Q TLKEKA TE KKLRQ+ CFKARPLP FYK+R T K  I+KVPLT+PESP  G  STP + S+V++ ++ P H     KNN    +  KK   + RSLASR+    HENTSPNIQ 
Sbjct:    1 MGEPTCLMQQQPFSYAAGIPNQSNEDNPIHTLGQSISFGRFMSESLAWEKWSSFSHNRYVEEAERFSRPGSVAQKKAFFEAHYKNLAARKAAALLEQANVTANNQV---------PQPEQKSEVQDSVTQDAKL------DLDKPEAGLVANDNGPNLHAEIEISQSRKVEEVDPSTEKQAAVED-CLKVELLTQIGVADKEEEVKETELSGTKLMEKPLLKNSNDIPPLTLPLSQDFISKEDNPVPMSKKKAAVSSSLI--SGRASKLPCSPAKPAASPFHARKENNATPISKKYPIESKDRKKATPRSTHKSMNFTPVREINKITSRIIRKIDNSRVSSSYKVSKDCSTPLRTPTTASMLKESKHPLATPQSENRRATTPLHPSASANKTVRSKWHFLPTDCSKFVSACRNKSQSPNLSTPFNLRTEERAARRKERLEEKFNANQKEKVQLQATLKEKAETEIKKLRQTLCFKARPLPKFYKDRTTTKHHIEKVPLTQPESPNKG--STPIR-SMVQT-TAQPSH-----KNNGTKQIIGKK-IDNPRSLASRLKSITHENTSPNIQQ 542          
BLAST of g.arboreum_cottongen_reftransV1_0001675 vs. ExPASy TrEMBL
Match: A0A067LGA1_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_10193 PE=4 SV=1)

HSP 1 Score: 444.891 bits (1143), Expect = 2.677e-145
Identity = 281/555 (50.63%), Postives = 363/555 (65.41%), Query Frame = -3
Query:  203 MGDSTCLMQ--PFSYTAGLPNEAKEGNPIHGLGQSISFGRYMSESLAWEKWSTFSHNKYVEEAERYARPGSVAQKKAFFEAHYKXXXXXXXXXXXXXXXXXXXXXXXXXXXXNPNPRMAETGSIYDCKENNSEF--VKVQSSSVDEPQVLLENNMKNEAFEKNGVVVDKAEITDLEVKETTQVKNNCVKANQSRLLG------DDKELELSEGTQMEKPLLKGGKTNEDEFEVTSKMKPSQSSSKVFANARTSKMPSSPAKFKAPLRPNNGNNLTPMTKKSAMDISERKRSTPKSSHKSINFTHAKEFSKFTSTIIRKIDGSRIDSNSKASKECPTPLRTPNQVSISGKPKQSSATPWSENQSARTPVNSSASVSKTARGKWNFLPTDCSKILSACRNKSQSPGIFAS-FNLRTEERAARRKQRLEEKFNVIQEQKVQQQTTLKEKAGTEFKKLRQSFCFKARPLPDFYKERTPKDQIQKVPLTKPESPGIGRKSTPCKASIVESKSSVPPHRKSSIKNNCFMHVSEKKNRTSARSLASRIAMSAHENTSPNIQH 1834
            MG+ TCLMQ  PFSY AG+PNE+ EGNP+H LGQS+SFGR+MSESLAWEKWS+FS+N+YVEEAER++RPGSVAQKKAFFEAHYK LAARKAAALLEQAN+AA  N TE +  N   ++ ++G +    +   ++  V V+ +   E  VL  +++ N   E       K E  D  + E   V  + V        G      + KE E++    MEKPLLK   +  D+  +  K        K+    + S+MPS+PAK  A +R    NN TP++KK  +D  ++K+STPKS+HKS+NFT  +  +K TS++IRKID S + SN KASK+C TPL+TP  V +  +PK + ATP SE++ ARTP++  AS SKT R +W+FLPTDCS  +SA +NKSQSP +  + F+ RTEERAARRK++LEEKFN  Q QKVQ Q TLKEKA TE KKLRQ+ CFKARPLPDFY+ER  K+ I+KVPLT  +SP + R  +P   SI++  S   P    S KN    H    KN  + RSL SR+     ENTSPNIQ+
Sbjct:    1 MGEPTCLMQQQPFSYVAGIPNESNEGNPLHVLGQSVSFGRFMSESLAWEKWSSFSNNRYVEEAERFSRPGSVAQKKAFFEAHYKNLAARKAAALLEQANSAAEKNETEVQDDNA-VQVQDSGEVNTNSQLGLDYKQVDVKETINAEASVLPNDDVHNLLVEMPICESRKLEEVDT-LTENPAVGKDSVNFETLTQFGVADSEEEVKEREITGSKLMEKPLLKDFISTRDDLTLMGK-------KKLQICGKASRMPSTPAKPAASVRAKKENNSTPISKKCTIDALDKKKSTPKSTHKSMNFTPVRGINKITSSVIRKIDNSIMGSNYKASKDCTTPLKTPTMVPVLREPKHTLATPQSEDRRARTPLHPLASGSKTVRSRWHFLPTDCSNFMSARKNKSQSPNLSTTPFSFRTEERAARRKEKLEEKFNANQAQKVQLQATLKEKAETEIKKLRQTLCFKARPLPDFYRERAKKNPIEKVPLTHSQSPNLARTPSP---SIIQRTSQ--PSLSYSFKNGGPKH-GMGKNGGNLRSLTSRLRSITRENTSPNIQY 540          
BLAST of g.arboreum_cottongen_reftransV1_0001675 vs. ExPASy TrEMBL
Match: A0A067EA45_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g009164mg PE=4 SV=1)

HSP 1 Score: 444.121 bits (1141), Expect = 3.046e-145
Identity = 288/553 (52.08%), Postives = 353/553 (63.83%), Query Frame = -3
Query:  203 MGDSTCLMQ-----PFSYTAGLPNEAKE-GNPIHGLGQSISFGRYMSESLAWEKWSTFS-HNKYVEEAERYARPGSVAQKKAFFEAHYKXXXXXXXXXXXXXXXXXXXXXXXXXXXXNPNPRMAETGSIYDCKENNSEFVKVQSSSVDEPQVLLENNMKNEAFEKNGVVVDKAEITDLEVKETTQVKNNCVKANQSRLLGDDKELELSEGTQMEKPLLKGGKTNEDEFEVTSKMKPSQSSSKVFANARTSKMPSSPAKFKAPLRPNNGNNLTPMTKKSAMDISERKRSTPKSSHKSINFTHAKEFSKFTSTIIRKIDGSRI-DSNSKASKECPTPLRTPNQVSISGKPKQSSATPWSENQSARTPVNSSASVSKTARGKWNFLPTDCSKILSACRNKSQSPGIFASFNLRTEERAARRKQRLEEKFNVIQEQKVQQQTTLKEKAGTEFKKLRQSFCFKARPLPDFYKERT-PKDQIQKVPLTKPESPGIGRKSTPCKASIVESKSSVPPHRKSSIKNNCFMHVSEKKNRTSARSLASRIAMSAHENTSPNIQH 1834
            MG+STCLMQ     PFSY +G PNEAKE GNPIH LGQS+SFGR+MSESLAWEKWS+FS HNKYVEEAERY+RPGSVAQKKAFFEAHYK LAARK AA L +    A+ N    E+Q         G + +    +S+ + V+    +   +L+  +  N    +  V  +K E  + E  ++T      V  +  R   D K   LS   QM+KP LK   +N+D+    SK KPS SSSK     R +K PS+PAK  APL+     N TP+ KKSA+D ++ KRSTPKS HKSI  T A+E ++ TSTI+RKIDGS++  SNSKASK+C TPL TP   S++G PK   ATPWSEN+   TP +S+   SKT R +WNFLPT+         NK QSP  F  F LRTEERAARRK++LEEKFN  Q QK+Q+Q TLKEKA TE +KLRQ+ CFKARPLP FYKER  PK Q+ K P T+P+SP +        AS  ++K S P  R  + K+    HV EKK+  S RSLASR     HEN SPNIQH
Sbjct:    1 MGESTCLMQMQVQQPFSYVSGFPNEAKEEGNPIHALGQSVSFGRFMSESLAWEKWSSFSSHNKYVEEAERYSRPGSVAQKKAFFEAHYKELAARKKAAALLEQAQDASNNNLAGESQP-------EGEVENVTAQDSQTIAVEEQ--EAATILVHESESNSVLGQRSVDGEK-ETENCEKTKSTNQLERVVVVDSKREAKDSK---LSGANQMQKPRLKSSNSNQDDRASMSKKKPSFSSSKSLNFGRATKTPSTPAKPTAPLQSTKEINATPIKKKSAIDFADNKRSTPKSIHKSIYLTPAREINRLTSTIVRKIDGSKVMGSNSKASKDCSTPLMTPTAASVNGAPKHPLATPWSENRRDGTPHDSNMG-SKTVRARWNFLPTE---------NKLQSPNSFTPFRLRTEERAARRKEKLEEKFNANQIQKLQKQVTLKEKAETEIRKLRQTLCFKARPLPHFYKERAIPKSQMNKDPPTRPQSPKLT-------ASTFQTKPSTPRQRPPT-KHIGSDHVLEKKSHASTRSLASRPTKITHENKSPNIQH 522          
BLAST of g.arboreum_cottongen_reftransV1_0001675 vs. ExPASy TrEMBL
Match: D7SPX1_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_14s0219g00090 PE=4 SV=1)

HSP 1 Score: 416.001 bits (1068), Expect = 7.941e-134
Identity = 275/572 (48.08%), Postives = 356/572 (62.24%), Query Frame = -3
Query:  203 MGDSTCLMQPFSYTAGLPNEAKEGNPIHGLGQSISFGRYMSESLAWEKWSTFSHNKYVEEAERYARPGSVAQKKAFFEAHYKXXXXXXXXXXXXXXXXXXXXXXXXXXXXNPNPRMAETGSIYDCKENNSEFVKVQSSSVD-EPQVLLENNMKNEAFEKNGVVVDKAEI-----TDLEVKETTQVKNNCVKANQSRLLGDDK------ELELSEGTQMEKPLLKGG-KTNEDEFEVTSKMKPSQSSSKVFANARTSKMPSSPAKFKAPLRPNNGNNLTPMTKKSAMDISERKRSTPKSSHKSINFTHAKEFSKFTSTIIRKIDGSRIDSN-SKASKECPTPLRTPNQVSISGKPKQSSATPWSENQSARTPVNSSASVSKTARGKWNFLPTDCSKILSACRNKSQSPGIFASFNLRTEERAARRKQRLEEKFNVIQEQKVQQQTTLKEKAGTEFKKLRQSFCFKARPLPDFYKER-TPKDQIQKVPLTKPESPGIGRKSTP-------------CKASIVESKSSVPPHRKSSIKNNCFMHVSEKKNRTSARSLASRIAMSAHENTSPNIQH 1834
            M +S CLM  FSY +G+ +EAKEGNP+H LG+SISFGR+MSESL+WEKWS+FS+N+YVEEAERYARPGSVAQKKAFFEAHYK +AA+KAAALLEQANAA             +   A+         N +   + +  ++D E    +++N  N   E N  V++ +++      D   K+   V+N   K   S  +GD +      ELEL+  TQMEKPLLK     N++     +K KP+  S+K    +R  K+PSSP K  AP  P   N  TP+++K A + S++KRSTP S H SIN   A+E +K ++ ++RKI+ SR  ++ SKASK+C TPLRTP +  I+G  K  SATP SEN+  RTP +  AS S+T   K  FLPT C+  LSA RNKSQSP    SFNLRTEERAARRK +LEE+FN  + +KVQ QT +KEKA +E +KLRQ+ CFKARPLPDFYKER T K Q +K+P T  ESP  GRK T                 S V+    +PP +   IK++   HV+EK N+     L S   ++ HEN SPNIQH
Sbjct:    1 MEESACLMHAFSYVSGICHEAKEGNPMHSLGESISFGRFMSESLSWEKWSSFSNNRYVEEAERYARPGSVAQKKAFFEAHYKRIAAKKAAALLEQANAAENNAPEAEYEGCVDNAAAKFSQTPISDSNVAVEEQQEVKAIDSEADFRVDSNGYNPNVEVN--VLESSKVMAGLGADPVTKDQVLVENP-TKIESSDKVGDAENHNKGTELELTRTTQMEKPLLKKNPDPNQEVLASVTKKKPTTPSTKPSVYSRAHKLPSSPTKPTAPFHPRKENIATPISRKPATESSDKKRSTPLSHHLSINIASAREPTKLSNPVVRKIETSRGGTSFSKASKDCSTPLRTPTRAPINGASKHPSATPSSENRRVRTPGDPLASGSRTTGSKCRFLPTYCTDPLSALRNKSQSPNFSTSFNLRTEERAARRK-KLEERFNAKETEKVQLQTKIKEKAESELRKLRQTLCFKARPLPDFYKERETLKGQTKKIPATHHESPKPGRKPTTSAVHPQSPKPGRKLTTSTVQGPKPLPP-QWPCIKSSGSKHVAEKINQAPNTPLISVRVITTHENRSPNIQH 567          
BLAST of g.arboreum_cottongen_reftransV1_0001675 vs. ExPASy TrEMBL
Match: V4TJ11_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10014952mg PE=4 SV=1)

HSP 1 Score: 376.326 bits (965), Expect = 3.418e-119
Identity = 269/554 (48.56%), Postives = 331/554 (59.75%), Query Frame = -3
Query:  203 MGDSTCLMQ-----PFSYTAGLPNEAKE-GNPIHGLGQSISFGRYMSESLAWEKWSTFS-HNKYVEEAERYARPGSVAQKKAFFEAHYKXXXXXXXXXXXXXXXXXXXXXXXXXXXXNPNPRMAETGSIYDCKENNSEFVKVQSSSVDEPQVLLENNMKNEAFEKNGVVVDKAEITDLEVKETTQVKNNCVKANQSRLLGDDKELELSEGTQMEKPLLK-GGKTNEDEFEVTSKMKPSQSSSKVFANARTSKMPSSPAKFKAPLRPNNGNNLTPMTKKSAMDISERKRSTPKSSHKSINFTHAKEFSKFTSTIIRKIDGSRI-DSNSKASKECPTPLRTPNQVSISGKPKQSSATPWSENQSARTPVNSSASVSKTARGKWNFLPTDCSKILSACRNKSQSPGIFASFNLRTEERAARRKQRLEEKFNVIQEQKVQQQTTLKEKAGTEFKKLRQSFCFKARPLPDFYKERT-PKDQIQKVPLTKPESPGIGRKSTPCKASIVESKSSVPPHRKSSIKNNCFMHVSEKKNRTSARSLASRIAMSAHENTSPNIQH 1834
            MG+STCLMQ     PFSY +G PNEAKE GNPIH LGQS+SFGR+MSESLAWEKWS+FS HNKYVEEAERY+RPGSVAQKKAFFEAHYK LAARK AA L +    A+ N    E+Q         G + +    +S+ + V+        V  E+   N   +++  VV + E  + E  E+       V  +  R   D K   LS   QM+KP LK    +N+D+    SK KPS SSSK     R +K PS+PAK  APL+     N TP+ KKSA+D ++ KRSTPKS HKSI  T A+E ++ TSTI+RKIDGS++  SNSKASK+C TPL TP   S++G PK   ATPWSEN+S   PV+S          KW+ +P                    AS  L + +       +LEEKFN  Q QK+Q+Q TLKEKA TE +KLRQ+ CFKARPLPDFYKER  PK Q  K P T+P+SP +        AS  ++K S P  R  + K+    HV EKK+  S RSLASR     HEN SPNIQH
Sbjct:    1 MGESTCLMQMQVQQPFSYVSGFPNEAKEEGNPIHALGQSVSFGRFMSESLAWEKWSSFSSHNKYVEEAERYSRPGSVAQKKAFFEAHYKELAARKKAAALLEQAQDASNNNLAGESQP-------EGEVQNVTAQDSQLIAVEEQEAATISVH-ESESNNVLGQRSADVVKETE--NCEKTESINQLERVVVVDSKREAKDSK---LSGTNQMQKPRLKQSSNSNQDDRASMSKKKPSFSSSKSLNFGRATKTPSTPAKPTAPLQSTKEINATPIKKKSAIDFADNKRSTPKSIHKSIYLTPAREINRLTSTIVRKIDGSKVMGSNSKASKDCSTPLMTPTAASVNGAPKHPLATPWSENRS-NCPVSSK---------KWH-MP-------------------LASKGLPSPDYCFFMPVKLEEKFNANQIQKLQKQVTLKEKAETEIRKLRQTLCFKARPLPDFYKERAIPKSQTNKDPPTRPQSPKLT-------ASTFQTKPSTPRQRPPT-KHIGSDHVLEKKSHASTRSLASRPTKITHENKSPNIQH 503          
BLAST of g.arboreum_cottongen_reftransV1_0001675 vs. ExPASy TrEMBL
Match: A0A0D2S8R5_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_007G074700 PE=4 SV=1)

HSP 1 Score: 359.762 bits (922), Expect = 3.562e-115
Identity = 222/371 (59.84%), Postives = 252/371 (67.92%), Query Frame = -3
Query:  701 EGNPIHGLGQSISFGRYMSE-SLAWEKWSTFSHNKYVEEAERYARPGSVAQKKAFFEAHYKXXXXXXXXXXXXXXXXXXXXXXXXXXXXNPNP--RMA-----ETGSIYDCKENN-SEFVKVQSS------SVDEPQVLLENNMKNEAFEKNGVVVDKAEITDLEVKETTQVKNNCVKANQSRLLGDDKELELSEGTQMEKPLLKGGKTNEDEFEVTSKMKPSQSSSKVFANARTSKMPSSPAKFKAPLRPNNGNNLTPMTKKSAMDISERKRSTPKSSHKSINFTHAKEFSKFTSTIIRKIDGSRIDSNSKASKECPTPLRTPNQVSISGKPKQSSATPWSENQSARTPVNSSASVSKTARGKWNFLPTD 1768
            +GNP+  LGQSISFGR+MS+ SLAWEK STFSH KYVEEA+RYARPGSVAQKKAFFEAHYKTLAARKA     +AN     +     ++  N   +MA     ETGSIYD KENN S+FV+ +SS      SV E  VL+E N+KNEA           EI DLE+ E T V+N   K NQSR L +  ELELSE TQMEKPLLK                       V +  R +K+PSS A     +RPN GNN+TPM+ KSAM IS+RKRSTPKSSHK IN T AKE S+ TSTIIRKIDGSRI SN K SKECPTPLRT N  S SG+PKQS ATPW EN+SARTP NSSASVSKT+RGKWN LPT+
Sbjct:    2 QGNPVAVLGQSISFGRFMSDQSLAWEKQSTFSHKKYVEEAQRYARPGSVAQKKAFFEAHYKTLAARKALLEQAKANEGMVQDIGTQVSEIMNSSSQMAALGHEETGSIYDGKENNNSDFVEFESSLVEGADSVGEHNVLVEINLKNEA-----------EIKDLELSEATHVENLEKKVNQSRKLEEGMELELSEETQMEKPLLK-----------------------VSSYGRRTKVPSSSA-----IRPNKGNNVTPMSNKSAMKISDRKRSTPKSSHKFINSTPAKEISRLTSTIIRKIDGSRIASNFKPSKECPTPLRTSNMASTSGRPKQSLATPWLENRSARTPFNSSASVSKTSRGKWNLLPTE 333          
BLAST of g.arboreum_cottongen_reftransV1_0001675 vs. ExPASy TrEMBL
Match: M1AYB5_SOLTU (Uncharacterized protein OS=Solanum tuberosum GN=PGSC0003DMG400012646 PE=4 SV=1)

HSP 1 Score: 353.599 bits (906), Expect = 1.922e-110
Identity = 247/542 (45.57%), Postives = 320/542 (59.04%), Query Frame = -3
Query:  320 MGDSTCLMQPFSYTAGLPNEAKEGNPIHGLGQSISFGRYMSESLAWEKWSTFSHNKYVEEAERYARPGSVAQKKAFFEAHYKXXXXXXXXXXXXXXXXXXXXXXXXXXXXNPNPRMAETGSIYDCKENNSEFVK---VQSSSVDEPQVLLENNMKNE---AFEKNGVVVDKAEITDLEVKE-------------TTQVKNNCVKANQSRLLGDDKELELSEGTQMEKPLLK----GGKTNEDEFEVTSKMKPSQSSSKVFANARTSKMPSSPAKFKAPLRPNNGNNLTPMTKKSAMDISERKRSTPKSSHKSINFTHAKEFSKF--TSTIIRKIDGSRIDSNSK-ASKECPTPLRTPNQVSISGKPKQSSATPWSENQSARTPVNSSASVSKTARGKWNFLPTDCSKILSACRNKSQSPGIFASFNLRTEERAARRKQRLEEKFNVIQEQKVQQQTTLKEKAGTEFKKLRQSFCFKARPLPDFYKE-RTPKDQIQKVPLTKPESPGIGRK----------STPCKASIVESKSSVPPHRKSS 1834
            M DS CL+  FSY + +PNE K+GNP+H LG+SISFGR++SESL WEKWSTFSH +YVEEAERYA+PGSVAQKKAFFEAHYK +AA+KAAALLEQAN               NP              NSE  K     S+S+ +P+V       +E   A   + +V D   + D E  E             T +  +N ++  +++      E  +SE +  EKPLLK      K  +D   VTSK K + SS K    ++ SK P SP++    L  +  NN TP+T  S +D+    RSTPKS +K INFT AKE  K       ++K       + SK ASK+C TPL+TP   S +G   +   TP SE++  +TP++ SAS S+TA  KWN L +  SK  +A RNK QSP +   F+LRTEERA RRKQ+LEEKFN  +E+KVQQQTTLKEKAGTE ++LRQSFCFKARPLPDFYKE  T KD  +K+P+T+ + P  GR           S P  +S+ ++ S   P +K+S
Sbjct:    1 MEDSACLIHAFSYASAIPNEIKQGNPVHALGESISFGRFVSESLDWEKWSTFSHKRYVEEAERYAKPGSVAQKKAFFEAHYKKIAAQKAAALLEQANQE-------------NP--------------NSEITKNSAPDSTSLVKPRVEANQEEVHENPDAVTTDSMVKDSVSVADAEEIESESPVEGPGTPEATEKEPSNQIENGETQETVSGSE--ISETSHTEKPLLKIKSSSSKLEDDPASVTSKKKSAFSSFKSAVYSKKSKFPFSPSRHNILLDVDKENNFTPITTNSNLDLMNEVRSTPKSLNKLINFTPAKEAHKIPPPPPFLKKESSKVAPTTSKAASKQCATPLKTPMATS-NGASNRPMTTPSSESRRIKTPIHPSASGSRTAGPKWNIL-SSVSKSFTAYRNKLQSPTLSTPFSLRTEERATRRKQKLEEKFNANEEKKVQQQTTLKEKAGTELRRLRQSFCFKARPLPDFYKETETAKDHAKKIPVTQTQLPKRGRMPFPSSKQGLVSKPASSSLAKNDSCKNPRKKTS 511          
BLAST of g.arboreum_cottongen_reftransV1_0001675 vs. ExPASy TrEMBL
Match: A0A0B0PE13_GOSAR (Dihydroorotate dehydrogenase (Quinone) OS=Gossypium arboreum GN=F383_03531 PE=4 SV=1)

HSP 1 Score: 341.273 bits (874), Expect = 1.169e-106
Identity = 237/482 (49.17%), Postives = 274/482 (56.85%), Query Frame = -3
Query:  368 EGNPIHGLGQSISFGRYMSE-SLAWEKWSTFSHNKYVEEAERYARPGSVAQKKAFFEAHYKXXXXXXXXXXXXXXXXXXXXXXXXXXXXNPN--PRMA-----ETGSIYDCKENN-SEFVKVQSS------SVDEPQVLLENNMKNEAFEKNGVVVDKAEITDLEVKETTQVKNNCVKANQSRLLGDDKELELSEGTQMEKPLLKGGKTNEDEFEVTSKMKPSQSSSKVFANARTSKMPSSPAKFKAPLRPNNGNNLTPMTKKSAMDISERKRSTPKSSHKSINFTHAKEFSKFTSTIIRKIDGSRIDSNSKASKECPTPLRTPNQVSISGKPKQSSATPWSENQSARTPVNSSASVSKTARGKWNFLPTDCSKILSACRNKSQSPGIFASFNLRTEERAARRKQRLEEKFNVIQEQKVQQQTTLKEKAGTEFKKLRQSFCFKARPLPDFYKERTPKDQIQKVPLTKPESPGIGRKSTPCKA 1768
            +GNP+  LGQSISFGR+MS+ SLAWEKWSTFSH KYVEEA+RYARPGSVAQKKAFFEAHYKTLAARKA     +AN     +     ++  N   +MA     ETGSIYD KENN S+FV+ +SS      SV E  VLLE N+KNEA           EI DLE+ E T V+N   K NQSR L +  ELELSE TQ+ KPLLK                       + +  R +K+PSSPA     +RPN GNN+TPM+ KSAM+IS+RKRSTPKSSHK IN T AKE S+ TSTIIRKI GSRI SNSK SKE PTPLRT N  S SG+PKQS ATPW EN+S         ++S      W   P+                                  +RLEEKFN  QEQKV+QQTTL                                    KVPLT+PES G+GRKSTP KA
Sbjct:    2 QGNPVAVLGQSISFGRFMSDQSLAWEKWSTFSHKKYVEEAQRYARPGSVAQKKAFFEAHYKTLAARKALLEQAKANEGMVQDIGTEVSEIMNLSSQMAALGHEETGSIYDGKENNNSDFVEFESSIVEGGDSVGEHNVLLEINLKNEA-----------EIKDLELSEATHVENLEKKVNQSRKLEEVMELELSEETQIGKPLLK-----------------------MSSYGRRTKVPSSPA-----IRPNKGNNVTPMSNKSAMEISDRKRSTPKSSHKFINSTPAKEISRLTSTIIRKIGGSRIASNSKPSKEFPTPLRTSNMASTSGRPKQSLATPWLENRS-----QCEQNIS------WKMEPSS--------------------------------NRRLEEKFNASQEQKVEQQTTL------------------------------------KVPLTRPESAGVGRKSTPRKA 365          
BLAST of g.arboreum_cottongen_reftransV1_0001675 vs. ExPASy Swiss-Prot
Match: WVD2_ARATH (Protein WAVE-DAMPENED 2 OS=Arabidopsis thaliana GN=WVD2 PE=2 SV=1)

HSP 1 Score: 65.855 bits (159), Expect = 8.080e-11
Identity = 44/124 (35.48%), Postives = 72/124 (58.06%), Query Frame = -3
Query:  353 DCSKILSACRNKSQSPGIFASFNLRTEERAARRK---QRLEEKFNVIQEQKVQQQTTLKEKAGTEFKKLRQSFCFKARPLPDFYKERTP-KDQIQKVPLTKPESPGIG---RKSTPCKASIVES 703
            DCS + S+ +N         +   R+ +RA +RK   Q+LEEK   ++ ++++ +   KE+     K+LR++  FKA P+PDFY +R P K +++K PLT+P+SP +    RKS  C  +I  S
Sbjct:   67 DCS-VASSMKNAKSKVTHGTAPRFRSAQRAEKRKEYYQKLEEKHQALEAERIELEQRQKEEQEAAIKQLRKNLKFKANPVPDFYYQRPPVKPELKKFPLTRPKSPKLNLSRRKS--CSDAITSS 187          
BLAST of g.arboreum_cottongen_reftransV1_0001675 vs. ExPASy Swiss-Prot
Match: WDL1_ARATH (Protein WVD2-like 1 OS=Arabidopsis thaliana GN=WDL1 PE=1 SV=1)

HSP 1 Score: 58.151 bits (139), Expect = 6.700e-8
Identity = 31/84 (36.90%), Postives = 56/84 (66.67%), Query Frame = -3
Query:  395 LRTEERAARRK---QRLEEKFNVIQEQKVQQQTTLKEKAGTEFKKLRQSFCFKARPLPDFYKERTP-KDQIQKVPLTKPESPGI 634
             R+ +RA +RK   Q+LEEK   ++ ++ + +   K++     K+LR++  FKA+P+P+FY E  P K +++K+PLT+P+SP +
Sbjct:  128 FRSAQRAEKRKEYYQKLEEKNQALEAERNELEQRQKDEQEAALKQLRKNLKFKAKPVPNFYYEAPPAKPELKKLPLTRPKSPKL 211          
The following BLAST results are available for this feature:
BLAST of g.arboreum_cottongen_reftransV1_0001675 vs. ExPASy TrEMBL
Analysis Date: 2016-11-15 (Homology Analysis for Gossypium arboreum CottonGen RefTrans V1 vs TrEMBL)
Total hits: 25
Match NameE-valueIdentityDescription
A0A061EE08_THECC5.220e-15462.59TPX2 family protein, putative isoform 5 OS=Theobro... [more]
A0A067EMB1_CITSI6.382e-15453.61Uncharacterized protein OS=Citrus sinensis GN=CISI... [more]
B9SLR7_RICCO9.172e-15151.58Putative uncharacterized protein OS=Ricinus commun... [more]
A0A067LGA1_JATCU2.677e-14550.63Uncharacterized protein OS=Jatropha curcas GN=JCGZ... [more]
A0A067EA45_CITSI3.046e-14552.08Uncharacterized protein OS=Citrus sinensis GN=CISI... [more]
D7SPX1_VITVI7.941e-13448.08Putative uncharacterized protein OS=Vitis vinifera... [more]
V4TJ11_9ROSI3.418e-11948.56Uncharacterized protein OS=Citrus clementina GN=CI... [more]
A0A0D2S8R5_GOSRA3.562e-11559.84Uncharacterized protein OS=Gossypium raimondii GN=... [more]
M1AYB5_SOLTU1.922e-11045.57Uncharacterized protein OS=Solanum tuberosum GN=PG... [more]
A0A0B0PE13_GOSAR1.169e-10649.17Dihydroorotate dehydrogenase (Quinone) OS=Gossypiu... [more]

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BLAST of g.arboreum_cottongen_reftransV1_0001675 vs. ExPASy Swiss-Prot
Analysis Date: 2016-11-15 (Homology Analysis for Gossypium arboreum CottonGen RefTrans V1 vs SwissProt)
Total hits: 2
Match NameE-valueIdentityDescription
WVD2_ARATH8.080e-1135.48Protein WAVE-DAMPENED 2 OS=Arabidopsis thaliana GN... [more]
WDL1_ARATH6.700e-836.90Protein WVD2-like 1 OS=Arabidopsis thaliana GN=WDL... [more]
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InterPro
Analysis Name: InterProScan analysis for Gossypium arboreum CottonGen RefTrans V1
Date Performed: 2016-11-14
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 404..431
NoneNo IPR availablePANTHERPTHR31358FAMILY NOT NAMEDcoord: 206..532
coord: 1..177
NoneNo IPR availablePANTHERPTHR31358:SF12TPX2 (TARGETING PROTEIN FOR XKLP2) PROTEIN FAMILYcoord: 206..532
coord: 1..177
IPR027329TPX2, C-terminalPFAMPF06886TPX2coord: 401..454
e-value: 2.5E-10
score: 40.3

Sequences
The following sequences are available for this feature:

contig sequence

>g.arboreum_cottongen_reftransV1_0001675 ID=g.arboreum_cottongen_reftransV1_0001675; Name=g.arboreum_cottongen_reftransV1_0001675; organism=Gossypium arboreum; type=contig; length=1896bp
ATCAACATTCGAATATGTTCGAAGGAACAAGTTTTGACAATATGTAACTA
AATGGTACTCTACTAATATGAATTTGCTAAGCTTTAGGAGGAGTTTTTTT
GTTGTACAGCCTCTCCATTTCATCCAATTCCAGGCATTGAGTAGTATTGT
GGGATTCATACAATGGACATGCCAAATTCTACAATTTAGTCAAACCTTAT
GCATGCTGGATATTTGGAGATGTGTTCTCATGAGCAGACATTGCAATTCG
TGAAGCAAGAGAACGAGCTGAAGTTCGGTTTTTCTTTTCCGAGACATGCA
TGAAGCAATTGTTCTTAATCGAAGACTTCCGATGAGGAGGAACAGAGCTT
TTGCTTTCAACAATGCTTGCTTTGCAGGGAGTAGATTTTCTTCCTATGCC
AGGTGATTCAGGTTTTGTCAATGGAACCTTTTGAATCTGATCTTTAGGTG
TTCTTTCTTTATAAAAATCCGGCAATGGTCTTGCCTTGAAGCAAAAGCTT
TGTCGTAGTTTCTTGAATTCGGTCCCTGCTTTTTCCTTGAGTGTTGTTTG
CTGTTGTACTTTTTGTTCCTGAATAACATTGAATTTCTCTTCAAGCCTCT
GTTTTCTTCTAGCAGCTCTTTCTTCAGTTCTCAAGTTGAAAGATGCAAAT
ATACCAGGTGACTGTGATTTGTTTCTGCAGGCACTCAAAATCTTTGAACA
ATCTGTAGGAAGAAAGTTCCATTTTCCACGAGCTGTTTTGCTGACACTGG
CTGAGGAATTAACTGGTGTTCTAGCACTTTGGTTTTCAGACCAAGGGGTG
GCCGAGGATTGTTTCGGTTTTCCACTTATAGACACCTGGTTCGGAGTCCT
TAAAGGTGTAGGACATTCTTTAGATGCTTTAGAATTCGAATCAATTCTTG
AACCATCAATCTTTCTGATGATAGTGGAAGTAAATTTACTGAATTCTTTT
GCATGGGTGAAGTTGATTGACTTGTGACTTGATTTTGGTGTTGATCTCTT
TCTTTCAGATATGTCCATTGCAGACTTCTTGGTCATTGGCGTGAGATTGT
TTCCATTGTTGGGTCGAAGTGGAGCTTTGAATTTTGCAGGTGAAGATGGC
ATCTTGGATGTTCTTGCATTAGCAAACACCTTTGAAGAAGATTGGGAAGG
TTTCATCTTGCTTGTTACCTCAAATTCATCTTCATTGGTTTTGCCACCCT
TAAGTAGAGGTTTCTCCATTTGAGTCCCTTCACTAAGCTCCAATTCTTTA
TCATCTCCAAGTAGTCTTGACTGGTTAGCTTTAACACAATTGTTCTTCAC
TTGGGTTGTTTCTTTAACCTCCAAATCTGTAATTTCAGCCTTATCAACAA
CCACACCATTCTTTTCAAAAGCTTCATTTTTCATATTATTCTCCAAAAGA
ACTTGGGGTTCATCAACTGAGCTGCTTTGAACCTTCACAAATTCTGAATT
ATTCTCTTTACAATCATAAATGGAGCCAGTTTCTGCCATTCGAGGGTTTG
GGTTTTGAGCTTCACTTTCAGTAGCATTAGTGGCAGCAGCAGCATTAGCT
TGTTCAAGCAAGGCAGCTGCTTTCCTAGCAGCAAGGGTCTTATAATGAGC
TTCAAAGAAAGCTTTTTTTTGAGCTACTGAACCTGGCCTAGCATATCTCT
CAGCTTCTTCAACATATTTGTTATGAGAAAAGGTTGACCATTTTTCCCAA
GCTAAAGATTCAGACATGTATCTGCCAAATGAAATTGACTGTCCAAGACC
ATGAATTGGGTTTCCCTCTTTGGCTTCATTGGGAAGGCCTGCAGTGTAAG
AAAATGGTTGCATGAGACAAGTTGAGTCCCCCATGTTTGCAAAAATGTTT
CTTTGGCAAAAGCCCTTTCTCTAAACTACTAAAAAAAGGGGAAATA
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Annotated Terms
The following terms have been associated with this contig:
Vocabulary: INTERPRO
TermDefinition
IPR027329TPX2_C