g.arboreum_cottongen_reftransV1_0013641, g.arboreum_cottongen_reftransV1_0013641 (contig) Gossypium arboreum
Overview
Alignments
The following features are aligned
Analyses
This contig is derived from or has results from the following analyses
Homology
BLAST of g.arboreum_cottongen_reftransV1_0013641 vs. ExPASy TrEMBL
Match: A0A0D2R8W0_GOSRA (Uncharacterized protein (Fragment) OS=Gossypium raimondii GN=B456_002G188300 PE=4 SV=1) HSP 1 Score: 1176.77 bits (3043), Expect = 0.000e+0 Identity = 623/654 (95.26%), Postives = 640/654 (97.86%), Query Frame = 3 Query: 3 ETKRRPNNKVHLWVFFKFPQTSKMETARLRLVFEDPNILSKSQKQQGLKRSWFILKPQHQTIFDLSSDLLHIFDLQKSCPNGLILSMDGFVLPPFEPTCILKDKDIVSVKMKGGKSTEIIKAGNGMNYLEELETMERLPVNTGVKHLANEEFDKETGGYKSELEEDEQELAPLEDRAQVESTPIENMVSKKRKARDKLPXXXXXXXXXXXXXXYPVSGDDGIDVRPRXXXXXXXXXXXTNDKVVGKDKPADIQGEPENSSSPEIDETGDNKTNLGRSSQLQNTGKGSADELITTTEVXXXXXXXXXXXXXXXXXXXEQAKLVKEKLQSKELLGKDDEKSPAKENLKFSEECLQAISNNDVEDNVVPIVVRPGHIRFEPLEEENAEQANQYSQISVKTFQWNGITSKKKGQKWGMEKT-FLKRNDNSFSHVSSEMVDVNDKATVTNDMDFDKLMPYSSLPKEGDLVAYRLVELSSTWTPELCSFRVGEISHYNAESNRIMLTPVPGYPNAFEKKTDEEASELPDTSLYGEDGSLEIDYSSLIDVRLVKLGILNATIAIADDNNEKYAQNQDVLTRQPNGSKEANSVSAASPAQANGAVNVWEEINQALSAKKAELSKEDGWSRADSSGRSAWSFRALRRSALGPTMAFLRAQNGI 1961 ETKRRPN+K HLWVFFKFPQTSKMETARLRLVFEDPNILSKSQK+QGLKRSWFILKPQHQTIFDLSSDLLHIFDL+KSCPNGLILSMDGFVLPPFEPTCILKDKDIVSVKMKGGKS EIIKAGNGMNYLEELETMERLPV TGVKHLANEEFDKETGGYKSELEEDEQELAPLED+AQVESTPIENMVSKKRKARDKLPSSRKKKSKLA+A+KYPVSGDDGIDVRP+KSKSSHKKKVS NDKVVGKDKPADIQGEPENSS+PEIDETGD+KTNLGRS+QLQNTGKGSADELITTTEVKKLPSRSARRKKAKRRWLREQAKLVKEK QSKELLGKDD++SPAKENLKFSEECLQAISNNDVEDNVVPIVVRPGHIRFEPLEEE+AEQA Q+SQISVKTFQWNGITSKKKGQKWGMEKT FL+RNDN+FSHVSSEMVDVNDKATVTNDMDFDKLMPYSSLPKEGDLVAYRLVELSSTWTPELCSFRVGEISHY+AESNRIMLTPVPGYPNA KKTDEEASELPDTSLYGEDGSLE YSSLIDVRLVKLG NATIAIADDNNE YAQNQDVLTRQPNGSKEANSVSAASPAQANGAVNVWEEINQALSAKKAELSKEDGWSRADSSGRSAWSFRALRRSALGPTMAFLRAQNGI Sbjct: 14 ETKRRPNSKGHLWVFFKFPQTSKMETARLRLVFEDPNILSKSQKKQGLKRSWFILKPQHQTIFDLSSDLLHIFDLRKSCPNGLILSMDGFVLPPFEPTCILKDKDIVSVKMKGGKSAEIIKAGNGMNYLEELETMERLPVKTGVKHLANEEFDKETGGYKSELEEDEQELAPLEDQAQVESTPIENMVSKKRKARDKLPSSRKKKSKLASAEKYPVSGDDGIDVRPKKSKSSHKKKVSINDKVVGKDKPADIQGEPENSSTPEIDETGDDKTNLGRSAQLQNTGKGSADELITTTEVKKLPSRSARRKKAKRRWLREQAKLVKEKPQSKELLGKDDQQSPAKENLKFSEECLQAISNNDVEDNVVPIVVRPGHIRFEPLEEEDAEQAIQHSQISVKTFQWNGITSKKKGQKWGMEKTPFLRRNDNNFSHVSSEMVDVNDKATVTNDMDFDKLMPYSSLPKEGDLVAYRLVELSSTWTPELCSFRVGEISHYDAESNRIMLTPVPGYPNASGKKTDEEASELPDTSLYGEDGSLEAYYSSLIDVRLVKLGNSNATIAIADDNNENYAQNQDVLTRQPNGSKEANSVSAASPAQANGAVNVWEEINQALSAKKAELSKEDGWSRADSSGRSAWSFRALRRSALGPTMAFLRAQNGI 667
BLAST of g.arboreum_cottongen_reftransV1_0013641 vs. ExPASy TrEMBL
Match: A0A0B0P2W2_GOSAR (Coilin OS=Gossypium arboreum GN=F383_24878 PE=4 SV=1) HSP 1 Score: 1176.77 bits (3043), Expect = 0.000e+0 Identity = 630/655 (96.18%), Postives = 630/655 (96.18%), Query Frame = 3 Query: 72 METARLRLVFEDPNILSKSQKQQGLKRSWFILKPQHQTIFDLSSDLLHIFDLQKSCPNGLILSMDGFVLPPFEPTCILKDKDIVSVKMKGGKSTEIIKAGNGMNYLEELETMERLPVNTGVKHLANEEFDKETGGYKSELEEDEQELAPLEDRAQVESTPIENMVSKKRKARDKLPXXXXXXXXXXXXXXYPVSGDDGIDVRPRXXXXXXXXXXXTNDKVVGKDKPADIQGEPENSSSPEIDETGDNKTNLGRSSQLQNTGKGSADELITTTEVXXXXXXXXXXXXXXXXXXXEQAKLVKEKLQSKELLGKDDEKSPAKENLKFSEECLQAISNNDVEDNVVPIVVRPGHIRFEPLEEENAEQANQYSQISVKTFQWNGITSKKKGQKWGMEKTFLKRNDNSFSHVSSEMVDVNDKATVTNDMDFDKLMPYSSLPKEGDLVAYRLVELSSTWTPELCSFRVGEISHYNAESNRIMLTPVPGYPNAFEKKTDEEASELPDTSLYGEDGSLE-------------------------IDYSSLIDVRLVKLGILNATIAIADDNNEKYAQNQDVLTRQPNGSKEANSVSAASPAQANGAVNVWEEINQALSAKKAELSKEDGWSRADSSGRSAWSFRALRRSALGPTMAFLRAQNGI 1961 METARLRLVFEDPNILSKSQKQQGLKRSWFILKPQHQTIFDLSSDLLHIFDLQKSCPNGLILSMDGFVLPPFEPTCILKDKDIVSVKMKGGKSTEIIKAGNGMNYLEELETMERLPVNTGVKHLANEEFDKETGGYKSELEEDEQELAPLEDRAQVESTPIENMVSKKRKARDKLPSSRKKKSKLATAKKYPVSGDDGIDVRPRKSKSSHKKKVSTNDKVVGKDKPADIQGEPENSSSPEIDETGDNKTNLGRSSQLQNTGKGSADELITTTEVKKLPSRSARRKKAKRRWLREQAKLVKEKLQSKELLGKDDEKSPAKENLKFSEECLQAISNNDVEDNVVPIVVRPGHIRFEPLEEENAEQANQYSQISVKTFQWNGITSKKKGQKWGMEKTFLKRNDNSFSHVSSEMVDVNDKATVTNDMDFDKLMPYSSLPKEGDLVAYRLVELSSTWTPELCSFRVGEISHYNAESNRIMLTPVPGYPNAFEKKTDEEASELPDTSLYGEDGSLE IDYSSLIDVRLVKLGILNATIAIADDNNEKYAQNQDVLTRQPNGSKEANSVSAASPAQANGAVNVWEEINQALSAKKAELSKEDGWSRADSSGRSAWSFRALRRSALGPTMAFLRAQNGI Sbjct: 1 METARLRLVFEDPNILSKSQKQQGLKRSWFILKPQHQTIFDLSSDLLHIFDLQKSCPNGLILSMDGFVLPPFEPTCILKDKDIVSVKMKGGKSTEIIKAGNGMNYLEELETMERLPVNTGVKHLANEEFDKETGGYKSELEEDEQELAPLEDRAQVESTPIENMVSKKRKARDKLPSSRKKKSKLATAKKYPVSGDDGIDVRPRKSKSSHKKKVSTNDKVVGKDKPADIQGEPENSSSPEIDETGDNKTNLGRSSQLQNTGKGSADELITTTEVKKLPSRSARRKKAKRRWLREQAKLVKEKLQSKELLGKDDEKSPAKENLKFSEECLQAISNNDVEDNVVPIVVRPGHIRFEPLEEENAEQANQYSQISVKTFQWNGITSKKKGQKWGMEKTFLKRNDNSFSHVSSEMVDVNDKATVTNDMDFDKLMPYSSLPKEGDLVAYRLVELSSTWTPELCSFRVGEISHYNAESNRIMLTPVPGYPNAFEKKTDEEASELPDTSLYGEDGSLEAYIEACEVGSQLRLVQSFNIHLCHMIDYSSLIDVRLVKLGILNATIAIADDNNEKYAQNQDVLTRQPNGSKEANSVSAASPAQANGAVNVWEEINQALSAKKAELSKEDGWSRADSSGRSAWSFRALRRSALGPTMAFLRAQNGI 655
BLAST of g.arboreum_cottongen_reftransV1_0013641 vs. ExPASy TrEMBL
Match: A0A0D2QFC4_GOSRA (Uncharacterized protein (Fragment) OS=Gossypium raimondii GN=B456_002G188300 PE=4 SV=1) HSP 1 Score: 1163.67 bits (3009), Expect = 0.000e+0 Identity = 625/687 (90.98%), Postives = 642/687 (93.45%), Query Frame = 3 Query: 3 ETKRRPNNKVHLWVFFKFPQTSKMETARLRLVFEDPNILSKSQKQQGLKRSWFILKPQHQTIFDLSSDLLHIFDLQKSCPNGLILS---------------------------------MDGFVLPPFEPTCILKDKDIVSVKMKGGKSTEIIKAGNGMNYLEELETMERLPVNTGVKHLANEEFDKETGGYKSELEEDEQELAPLEDRAQVESTPIENMVSKKRKARDKLPXXXXXXXXXXXXXXYPVSGDDGIDVRPRXXXXXXXXXXXTNDKVVGKDKPADIQGEPENSSSPEIDETGDNKTNLGRSSQLQNTGKGSADELITTTEVXXXXXXXXXXXXXXXXXXXEQAKLVKEKLQSKELLGKDDEKSPAKENLKFSEECLQAISNNDVEDNVVPIVVRPGHIRFEPLEEENAEQANQYSQISVKTFQWNGITSKKKGQKWGMEKT-FLKRNDNSFSHVSSEMVDVNDKATVTNDMDFDKLMPYSSLPKEGDLVAYRLVELSSTWTPELCSFRVGEISHYNAESNRIMLTPVPGYPNAFEKKTDEEASELPDTSLYGEDGSLEIDYSSLIDVRLVKLGILNATIAIADDNNEKYAQNQDVLTRQPNGSKEANSVSAASPAQANGAVNVWEEINQALSAKKAELSKEDGWSRADSSGRSAWSFRALRRSALGPTMAFLRAQNGI 1961 ETKRRPN+K HLWVFFKFPQTSKMETARLRLVFEDPNILSKSQK+QGLKRSWFILKPQHQTIFDLSSDLLHIFDL+KSCPNGLILS MDGFVLPPFEPTCILKDKDIVSVKMKGGKS EIIKAGNGMNYLEELETMERLPV TGVKHLANEEFDKETGGYKSELEEDEQELAPLED+AQVESTPIENMVSKKRKARDKLPSSRKKKSKLA+A+KYPVSGDDGIDVRP+KSKSSHKKKVS NDKVVGKDKPADIQGEPENSS+PEIDETGD+KTNLGRS+QLQNTGKGSADELITTTEVKKLPSRSARRKKAKRRWLREQAKLVKEK QSKELLGKDD++SPAKENLKFSEECLQAISNNDVEDNVVPIVVRPGHIRFEPLEEE+AEQA Q+SQISVKTFQWNGITSKKKGQKWGMEKT FL+RNDN+FSHVSSEMVDVNDKATVTNDMDFDKLMPYSSLPKEGDLVAYRLVELSSTWTPELCSFRVGEISHY+AESNRIMLTPVPGYPNA KKTDEEASELPDTSLYGEDGSLEIDYSSLIDVRLVKLG NATIAIADDNNE YAQNQDVLTRQPNGSKEANSVSAASPAQANGAVNVWEEINQALSAKKAELSKEDGWSRADSSGRSAWSFRALRRSALGPTMAFLRAQNGI Sbjct: 14 ETKRRPNSKGHLWVFFKFPQTSKMETARLRLVFEDPNILSKSQKKQGLKRSWFILKPQHQTIFDLSSDLLHIFDLRKSCPNGLILSVCLSTSLFPSRTRHALIYIYILLPCYAIDFSLQMDGFVLPPFEPTCILKDKDIVSVKMKGGKSAEIIKAGNGMNYLEELETMERLPVKTGVKHLANEEFDKETGGYKSELEEDEQELAPLEDQAQVESTPIENMVSKKRKARDKLPSSRKKKSKLASAEKYPVSGDDGIDVRPKKSKSSHKKKVSINDKVVGKDKPADIQGEPENSSTPEIDETGDDKTNLGRSAQLQNTGKGSADELITTTEVKKLPSRSARRKKAKRRWLREQAKLVKEKPQSKELLGKDDQQSPAKENLKFSEECLQAISNNDVEDNVVPIVVRPGHIRFEPLEEEDAEQAIQHSQISVKTFQWNGITSKKKGQKWGMEKTPFLRRNDNNFSHVSSEMVDVNDKATVTNDMDFDKLMPYSSLPKEGDLVAYRLVELSSTWTPELCSFRVGEISHYDAESNRIMLTPVPGYPNASGKKTDEEASELPDTSLYGEDGSLEIDYSSLIDVRLVKLGNSNATIAIADDNNENYAQNQDVLTRQPNGSKEANSVSAASPAQANGAVNVWEEINQALSAKKAELSKEDGWSRADSSGRSAWSFRALRRSALGPTMAFLRAQNGI 700
BLAST of g.arboreum_cottongen_reftransV1_0013641 vs. ExPASy TrEMBL
Match: A0A0D2NQ02_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_002G188300 PE=4 SV=1) HSP 1 Score: 1135.17 bits (2935), Expect = 0.000e+0 Identity = 604/631 (95.72%), Postives = 620/631 (98.26%), Query Frame = 3 Query: 72 METARLRLVFEDPNILSKSQKQQGLKRSWFILKPQHQTIFDLSSDLLHIFDLQKSCPNGLILSMDGFVLPPFEPTCILKDKDIVSVKMKGGKSTEIIKAGNGMNYLEELETMERLPVNTGVKHLANEEFDKETGGYKSELEEDEQELAPLEDRAQVESTPIENMVSKKRKARDKLPXXXXXXXXXXXXXXYPVSGDDGIDVRPRXXXXXXXXXXXTNDKVVGKDKPADIQGEPENSSSPEIDETGDNKTNLGRSSQLQNTGKGSADELITTTEVXXXXXXXXXXXXXXXXXXXEQAKLVKEKLQSKELLGKDDEKSPAKENLKFSEECLQAISNNDVEDNVVPIVVRPGHIRFEPLEEENAEQANQYSQISVKTFQWNGITSKKKGQKWGMEKT-FLKRNDNSFSHVSSEMVDVNDKATVTNDMDFDKLMPYSSLPKEGDLVAYRLVELSSTWTPELCSFRVGEISHYNAESNRIMLTPVPGYPNAFEKKTDEEASELPDTSLYGEDGSLEIDYSSLIDVRLVKLGILNATIAIADDNNEKYAQNQDVLTRQPNGSKEANSVSAASPAQANGAVNVWEEINQALSAKKAELSKEDGWSRADSSGRSAWSFRALRRSALGPTMAFLRAQNGI 1961 METARLRLVFEDPNILSKSQK+QGLKRSWFILKPQHQTIFDLSSDLLHIFDL+KSCPNGLILSMDGFVLPPFEPTCILKDKDIVSVKMKGGKS EIIKAGNGMNYLEELETMERLPV TGVKHLANEEFDKETGGYKSELEEDEQELAPLED+AQVESTPIENMVSKKRKARDKLPSSRKKKSKLA+A+KYPVSGDDGIDVRP+KSKSSHKKKVS NDKVVGKDKPADIQGEPENSS+PEIDETGD+KTNLGRS+QLQNTGKGSADELITTTEVKKLPSRSARRKKAKRRWLREQAKLVKEK QSKELLGKDD++SPAKENLKFSEECLQAISNNDVEDNVVPIVVRPGHIRFEPLEEE+AEQA Q+SQISVKTFQWNGITSKKKGQKWGMEKT FL+RNDN+FSHVSSEMVDVNDKATVTNDMDFDKLMPYSSLPKEGDLVAYRLVELSSTWTPELCSFRVGEISHY+AESNRIMLTPVPGYPNA KKTDEEASELPDTSLYGEDGSLEIDYSSLIDVRLVKLG NATIAIADDNNE YAQNQDVLTRQPNGSKEANSVSAASPAQANGAVNVWEEINQALSAKKAELSKEDGWSRADSSGRSAWSFRALRRSALGPTMAFLRAQNGI Sbjct: 1 METARLRLVFEDPNILSKSQKKQGLKRSWFILKPQHQTIFDLSSDLLHIFDLRKSCPNGLILSMDGFVLPPFEPTCILKDKDIVSVKMKGGKSAEIIKAGNGMNYLEELETMERLPVKTGVKHLANEEFDKETGGYKSELEEDEQELAPLEDQAQVESTPIENMVSKKRKARDKLPSSRKKKSKLASAEKYPVSGDDGIDVRPKKSKSSHKKKVSINDKVVGKDKPADIQGEPENSSTPEIDETGDDKTNLGRSAQLQNTGKGSADELITTTEVKKLPSRSARRKKAKRRWLREQAKLVKEKPQSKELLGKDDQQSPAKENLKFSEECLQAISNNDVEDNVVPIVVRPGHIRFEPLEEEDAEQAIQHSQISVKTFQWNGITSKKKGQKWGMEKTPFLRRNDNNFSHVSSEMVDVNDKATVTNDMDFDKLMPYSSLPKEGDLVAYRLVELSSTWTPELCSFRVGEISHYDAESNRIMLTPVPGYPNASGKKTDEEASELPDTSLYGEDGSLEIDYSSLIDVRLVKLGNSNATIAIADDNNENYAQNQDVLTRQPNGSKEANSVSAASPAQANGAVNVWEEINQALSAKKAELSKEDGWSRADSSGRSAWSFRALRRSALGPTMAFLRAQNGI 631
BLAST of g.arboreum_cottongen_reftransV1_0013641 vs. ExPASy TrEMBL
Match: A0A0D2Q8P4_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_002G188300 PE=4 SV=1) HSP 1 Score: 1129.39 bits (2920), Expect = 0.000e+0 Identity = 603/631 (95.56%), Postives = 619/631 (98.10%), Query Frame = 3 Query: 72 METARLRLVFEDPNILSKSQKQQGLKRSWFILKPQHQTIFDLSSDLLHIFDLQKSCPNGLILSMDGFVLPPFEPTCILKDKDIVSVKMKGGKSTEIIKAGNGMNYLEELETMERLPVNTGVKHLANEEFDKETGGYKSELEEDEQELAPLEDRAQVESTPIENMVSKKRKARDKLPXXXXXXXXXXXXXXYPVSGDDGIDVRPRXXXXXXXXXXXTNDKVVGKDKPADIQGEPENSSSPEIDETGDNKTNLGRSSQLQNTGKGSADELITTTEVXXXXXXXXXXXXXXXXXXXEQAKLVKEKLQSKELLGKDDEKSPAKENLKFSEECLQAISNNDVEDNVVPIVVRPGHIRFEPLEEENAEQANQYSQISVKTFQWNGITSKKKGQKWGMEKT-FLKRNDNSFSHVSSEMVDVNDKATVTNDMDFDKLMPYSSLPKEGDLVAYRLVELSSTWTPELCSFRVGEISHYNAESNRIMLTPVPGYPNAFEKKTDEEASELPDTSLYGEDGSLEIDYSSLIDVRLVKLGILNATIAIADDNNEKYAQNQDVLTRQPNGSKEANSVSAASPAQANGAVNVWEEINQALSAKKAELSKEDGWSRADSSGRSAWSFRALRRSALGPTMAFLRAQNGI 1961 METARLRLVFEDPNILSKSQK+QGLKRSWFILKPQHQTIFDLSSDLLHIFDL+KSCPNGLILSMDGFVLPPFEPTCILKDKDIVSVKMKGGKS EIIKAGNGMNYLEELETMERLPV TGVKHLANEEFDKETGGYKSELEEDEQELAPLED+AQVESTPIENMVSKKRKARDKLPSSRKKKSKLA+A+KYPVSGDDGIDVRP+KSKSSHKKKVS NDKVVGKDKPADIQGEPENSS+PEIDETGD+KTNLGRS+QLQNTGKGSADELITTTEVKKLPSRSARRKKAKRRWLREQAKLVKEK QSKELLGKDD++SPAKENLKFSEECLQAISNNDVEDNVVPIVVRPGHIRFEPL EE+AEQA Q+SQISVKTFQWNGITSKKKGQKWGMEKT FL+RNDN+FSHVSSEMVDVNDKATVTNDMDFDKLMPYSSLPKEGDLVAYRLVELSSTWTPELCSFRVGEISHY+AESNRIMLTPVPGYPNA KKTDEEASELPDTSLYGEDGSLEIDYSSLIDVRLVKLG NATIAIADDNNE YAQNQDVLTRQPNGSKEANSVSAASPAQANGAVNVWEEINQALSAKKAELSKEDGWSRADSSGRSAWSFRALRRSALGPTMAFLRAQNGI Sbjct: 1 METARLRLVFEDPNILSKSQKKQGLKRSWFILKPQHQTIFDLSSDLLHIFDLRKSCPNGLILSMDGFVLPPFEPTCILKDKDIVSVKMKGGKSAEIIKAGNGMNYLEELETMERLPVKTGVKHLANEEFDKETGGYKSELEEDEQELAPLEDQAQVESTPIENMVSKKRKARDKLPSSRKKKSKLASAEKYPVSGDDGIDVRPKKSKSSHKKKVSINDKVVGKDKPADIQGEPENSSTPEIDETGDDKTNLGRSAQLQNTGKGSADELITTTEVKKLPSRSARRKKAKRRWLREQAKLVKEKPQSKELLGKDDQQSPAKENLKFSEECLQAISNNDVEDNVVPIVVRPGHIRFEPL-EEDAEQAIQHSQISVKTFQWNGITSKKKGQKWGMEKTPFLRRNDNNFSHVSSEMVDVNDKATVTNDMDFDKLMPYSSLPKEGDLVAYRLVELSSTWTPELCSFRVGEISHYDAESNRIMLTPVPGYPNASGKKTDEEASELPDTSLYGEDGSLEIDYSSLIDVRLVKLGNSNATIAIADDNNENYAQNQDVLTRQPNGSKEANSVSAASPAQANGAVNVWEEINQALSAKKAELSKEDGWSRADSSGRSAWSFRALRRSALGPTMAFLRAQNGI 630
BLAST of g.arboreum_cottongen_reftransV1_0013641 vs. ExPASy TrEMBL
Match: A0A0D2MCX0_GOSRA (Uncharacterized protein (Fragment) OS=Gossypium raimondii GN=B456_002G188300 PE=4 SV=1) HSP 1 Score: 852.432 bits (2201), Expect = 0.000e+0 Identity = 462/485 (95.26%), Postives = 478/485 (98.56%), Query Frame = 3 Query: 3 ETKRRPNNKVHLWVFFKFPQTSKMETARLRLVFEDPNILSKSQKQQGLKRSWFILKPQHQTIFDLSSDLLHIFDLQKSCPNGLILSMDGFVLPPFEPTCILKDKDIVSVKMKGGKSTEIIKAGNGMNYLEELETMERLPVNTGVKHLANEEFDKETGGYKSELEEDEQELAPLEDRAQVESTPIENMVSKKRKARDKLPXXXXXXXXXXXXXXYPVSGDDGIDVRPRXXXXXXXXXXXTNDKVVGKDKPADIQGEPENSSSPEIDETGDNKTNLGRSSQLQNTGKGSADELITTTEVXXXXXXXXXXXXXXXXXXXEQAKLVKEKLQSKELLGKDDEKSPAKENLKFSEECLQAISNNDVEDNVVPIVVRPGHIRFEPLEEENAEQANQYSQISVKTFQWNGITSKKKGQKWGMEKT-FLKRNDNSFSHVSSEMVDVNDKATVTNDMDFDKLMPYSSLPKEGDLVAYRLVELSSTWTPELCSFRV 1454 ETKRRPN+K HLWVFFKFPQTSKMETARLRLVFEDPNILSKSQK+QGLKRSWFILKPQHQTIFDLSSDLLHIFDL+KSCPNGLILSMDGFVLPPFEPTCILKDKDIVSVKMKGGKS EIIKAGNGMNYLEELETMERLPV TGVKHLANEEFDKETGGYKSELEEDEQELAPLED+AQVESTPIENMVSKKRKARDKLPSSRKKKSKLA+A+KYPVSGDDGIDVRP+KSKSSHKKKVS NDKVVGKDKPADIQGEPENSS+PEIDETGD+KTNLGRS+QLQNTGKGSADELITTTEVKKLPSRSARRKKAKRRWLREQAKLVKEK QSKELLGKDD++SPAKENLKFSEECLQAISNNDVEDNVVPIVVRPGHIRFEPLEEE+AEQA Q+SQISVKTFQWNGITSKKKGQKWGMEKT FL+RNDN+FSHVSSEMVDVNDKATVTNDMDFDKLMPYSSLPKEGDLVAYRLVELSSTWTPELCSFRV Sbjct: 14 ETKRRPNSKGHLWVFFKFPQTSKMETARLRLVFEDPNILSKSQKKQGLKRSWFILKPQHQTIFDLSSDLLHIFDLRKSCPNGLILSMDGFVLPPFEPTCILKDKDIVSVKMKGGKSAEIIKAGNGMNYLEELETMERLPVKTGVKHLANEEFDKETGGYKSELEEDEQELAPLEDQAQVESTPIENMVSKKRKARDKLPSSRKKKSKLASAEKYPVSGDDGIDVRPKKSKSSHKKKVSINDKVVGKDKPADIQGEPENSSTPEIDETGDDKTNLGRSAQLQNTGKGSADELITTTEVKKLPSRSARRKKAKRRWLREQAKLVKEKPQSKELLGKDDQQSPAKENLKFSEECLQAISNNDVEDNVVPIVVRPGHIRFEPLEEEDAEQAIQHSQISVKTFQWNGITSKKKGQKWGMEKTPFLRRNDNNFSHVSSEMVDVNDKATVTNDMDFDKLMPYSSLPKEGDLVAYRLVELSSTWTPELCSFRV 498
BLAST of g.arboreum_cottongen_reftransV1_0013641 vs. ExPASy TrEMBL
Match: A0A061E6T2_THECC (Sphere organelles protein-related, putative isoform 1 OS=Theobroma cacao GN=TCM_010599 PE=4 SV=1) HSP 1 Score: 815.839 bits (2106), Expect = 0.000e+0 Identity = 464/640 (72.50%), Postives = 537/640 (83.91%), Query Frame = 3 Query: 72 METARLRLVFEDPNILSKSQKQQGLKRSWFILKPQHQTIFDLSSDLLHIFDLQKSCPNGLILSMDGFVLPPFEPTCILKDKDIVSVKMKGGKSTEIIKAGNGMNYLEELETMERLPVNTGVKHLANEEFDKETGGYKSELEEDEQELAPLEDRAQVESTPIENMVSKKRKARDKLPXXXXXXXXXXXXXXYPVSGDDGIDVRPRXXXXXXXXXXXTNDKVVGKDKPADIQGEPENSSSPEIDETGDNKTNLGRSSQLQNTGKGSADELITTTEVXXXXXXXXXXXXXXXXXXXEQAKLVKEKLQSKELLGKDDEKSPAKENLKFSEECLQAISNNDVEDNVVPIVVRPGHIRFEPLEEENAEQANQYSQISVKTFQWNGITSKKKGQKWGMEKT-FLKRNDN-SFSHVSSEMVDVNDKATVTNDMDFDKLMPYSSLPKEGDLVAYRLVELSSTWTPELCSFRVGEISHYNAESNRIMLTPVPGYPNAFEKKTDEEASEL-PDTSLYGEDGSLEIDYSSLIDVRLVKLGILNATIAIADDNNEKYAQNQDVL-TRQPNGSKEANSVSAASPAQANGAVNVWEEINQALSAKKAELSKEDGWSRADSSGRSAWSFRALRRSALGPTMAFLRAQNGI*GMAPA 1979 MET RLRL+FED NIL+KSQK+QGLKRSW +LKPQHQTI DLSS LL++F L +SCP+GLILSMD FVLPPFE TCI KDKDI+SVK KGGK TEIIK G+G+N LEELE +E+ PVNTGVK LA++EFDK+TGGY+SE EEDEQEL PLE+ VESTPI+N+VSKKRKA +KLP ++KKSKL+ A K PVS D+G DV +KSKSSH++ V +KV+GKD P DIQGEPE S+PE DE+ D+ TN+GR QLQ TGKGS TT+E KK PSRSARRKKAKRRWLREQA + KEKL SK+LLGKD+++SPAKENL+ SEE LQ + N+ V+D VVP+V+RPGHIRFEPLE E+AE+A Q SQISV+TFQWNGITSKKKGQKWG EKT FLKRND+ SFS VS+EMV + +KAT+T+DMDFDKLMPYSSLPKEGD VAYRLVELSS+WTPELCSFRVG+IS Y+AESNRI+LTPVP YPNA EKK DE+ SEL DTSLYGEDGSLEIDY+SLIDVRL+K G NA I++A +E A++ +VL RQPNGSKEA VSA AQANG VN WEEI+QALSAKK ELSKEDGWS+ DSSGRS+WS+RALRRSALGPTMAFLRAQNGI G +P Sbjct: 1 METTRLRLLFEDRNILNKSQKKQGLKRSWILLKPQHQTILDLSSHLLYVFHLHRSCPHGLILSMDSFVLPPFESTCIFKDKDIISVKKKGGKRTEIIKVGDGLNSLEELEIVEQPPVNTGVKLLASKEFDKQTGGYESEPEEDEQELEPLENEEHVESTPIQNIVSKKRKASEKLPRPKRKKSKLSRAGKSPVSVDNGNDVHHKKSKSSHQRTVLPEEKVIGKDNPVDIQGEPEKLSNPETDESSDDDTNVGRFPQLQETGKGSVVVSQTTSEAKKPPSRSARRKKAKRRWLREQAIIEKEKLPSKQLLGKDNQQSPAKENLEVSEEHLQPVGNSSVKDYVVPVVIRPGHIRFEPLETEDAERAVQQSQISVETFQWNGITSKKKGQKWGKEKTPFLKRNDDKSFSQVSTEMVAIEEKATITDDMDFDKLMPYSSLPKEGDFVAYRLVELSSSWTPELCSFRVGKISDYDAESNRIILTPVPEYPNASEKKIDEDESELQSDTSLYGEDGSLEIDYTSLIDVRLIKHGNSNAIISVAGGISENCAEDPNVLKNRQPNGSKEAVLVSAPPLAQANGVVNGWEEISQALSAKKVELSKEDGWSQTDSSGRSSWSYRALRRSALGPTMAFLRAQNGILGASPT 640
BLAST of g.arboreum_cottongen_reftransV1_0013641 vs. ExPASy TrEMBL
Match: A0A061E6X3_THECC (Sphere organelles protein-related, putative isoform 2 OS=Theobroma cacao GN=TCM_010599 PE=4 SV=1) HSP 1 Score: 518.079 bits (1333), Expect = 4.863e-174 Identity = 314/448 (70.09%), Postives = 369/448 (82.37%), Query Frame = 3 Query: 72 METARLRLVFEDPNILSKSQKQQGLKRSWFILKPQHQTIFDLSSDLLHIFDLQKSCPNGLILSMDGFVLPPFEPTCILKDKDIVSVKMKGGKSTEIIKAGNGMNYLEELETMERLPVNTGVKHLANEEFDKETGGYKSELEEDEQELAPLEDRAQVESTPIENMVSKKRKARDKLPXXXXXXXXXXXXXXYPVSGDDGIDVRPRXXXXXXXXXXXTNDKVVGKDKPADIQGEPENSSSPEIDETGDNKTNLGRSSQLQNTGKGSADELITTTEVXXXXXXXXXXXXXXXXXXXEQAKLVKEKLQSKELLGKDDEKSPAKENLKFSEECLQAISNNDVEDNVVPIVVRPGHIRFEPLE-EENAEQANQYSQISVKTFQWNGITSKKKGQKWGMEKT-FLKRNDN-SFSHVSSEMVDVNDKATVTNDMDFDKLMPYSSLPKEGDLVAYRL 1406 MET RLRL+FED NIL+KSQK+QGLKRSW +LKPQHQTI DLSS LL++F L +SCP+GLILSMD FVLPPFE TCI KDKDI+SVK KGGK TEIIK G+G+N LEELE +E+ PVNTGVK LA++EFDK+TGGY+SE EEDEQEL PLE+ VESTPI+N+VSKKRKA +KLP ++KKSKL+ A K PVS D+G DV +KSKSSH++ V +KV+GKD P DIQGEPE S+PE DE+ D+ TN+GR QLQ TGKGS TT+E KK PSRSARRKKAKRRWLREQA + KEKL SK+LLGKD+++SPAKENL+ SEE LQ + N+ V+D VVP+V+RPGHIRFEPLE E+AE+A Q SQISV+TFQWNGITSKKKGQKWG EKT FLKRND+ SFS VS+EMV + +KAT+T+DMDFDKLMPYSSLPK G L Sbjct: 1 METTRLRLLFEDRNILNKSQKKQGLKRSWILLKPQHQTILDLSSHLLYVFHLHRSCPHGLILSMDSFVLPPFESTCIFKDKDIISVKKKGGKRTEIIKVGDGLNSLEELEIVEQPPVNTGVKLLASKEFDKQTGGYESEPEEDEQELEPLENEEHVESTPIQNIVSKKRKASEKLPRPKRKKSKLSRAGKSPVSVDNGNDVHHKKSKSSHQRTVLPEEKVIGKDNPVDIQGEPEKLSNPETDESSDDDTNVGRFPQLQETGKGSVVVSQTTSEAKKPPSRSARRKKAKRRWLREQAIIEKEKLPSKQLLGKDNQQSPAKENLEVSEEHLQPVGNSSVKDYVVPVVIRPGHIRFEPLETAEDAERAVQQSQISVETFQWNGITSKKKGQKWGKEKTPFLKRNDDKSFSQVSTEMVAIEEKATITDDMDFDKLMPYSSLPKGGRFCCISL 448
BLAST of g.arboreum_cottongen_reftransV1_0013641 vs. ExPASy TrEMBL
Match: D7SMC6_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_01s0137g00610 PE=4 SV=1) HSP 1 Score: 479.559 bits (1233), Expect = 4.298e-156 Identity = 309/663 (46.61%), Postives = 409/663 (61.69%), Query Frame = 3 Query: 72 METARLRLVFEDPNILSKSQKQQGLKRSWFILKPQHQTIFDLSSDLLHIFDLQKSCPNGLILSMDGFVLPPFEPTCILKDKDIVSVKMKGGKSTEIIKAGNGMNYLEELETMERLPVNTGVKHLANEEFDKETGGYKSELEEDEQELAPLEDRAQVESTPIENMVSKKRKARDKLPXXXXXXXXXXXXXXYPVSGDDGID-VRPRXXXXXXXXXXXTNDKVVGKDKPADIQGEPENSSSPEIDETGDN----KTNLGRSSQLQNTGKGSADELITTTEVXXXXXXXXXXXXXXXXXXXEQAKLVKE--KLQSKELLGKDDEKSPAKENLKFSEECLQAISNNDVEDNV-VPIVVRPGHIRFEPLEEENAEQANQYSQISVKTFQWNGITSKKKGQKWGMEKTFLKRND-NSFSHVSSEMVDVNDKATVTNDMDFDKLMPYSSLPKEGDLVAYRLVELSSTWTPELCSFRVGEISHYNAESNRIMLTPVPGYPNAFEKKTDEEASEL---PDTSLYGEDGSLEIDYSSLIDVRLVKLG------ILNATIAIADDNNEKYA------QNQDVLTRQPNGSKEANSVSAA-----------SPAQANGAVNVWEEINQALSAKKAELSKEDGWSRADSSGRSAWSFRALRRSALGPTMAFLRAQN 1955 MET R+R+V EDP++L+K+Q +GL+RSW +LKPQH+TI DLSS LL IF+L CPNGL+LSMDGFVLP FE TCILKDK+I+SVK KGG ++++ G+ N E+ +E ++ GVK LANEEFDKETGGY+SE EEDE + E+ QVE+ N SKKRKA KL S ++KK+K +K PV +D + V ++KS + K K +++ G+P+ + + IDE ++ N R +LQ G EV P + + R + + K ++E K++ KE+ + +SP KE K S E Q N+D +D V VPIV+RPGHIRFEPL +Q Q + +SV+TFQWNG TSKKKGQKWG EK +RND F+ SE V + + MDFDKL +S PKEGD++AYRL+ELSSTWTPEL +FRVG+IS Y+ ESN+++L VP P E + DE+AS L PDTSLY EDGSLEID+SSLIDVR++K G + A + D + + +N + T P G VS A +P NG VN W+EI++ LSAKKA+LS+EDG S+ +S GRS WS++ALR SALGPTM+FLRAQN Sbjct: 3 METVRVRVVLEDPDLLNKTQNSEGLRRSWLLLKPQHKTISDLSSYLLRIFNLHDFCPNGLLLSMDGFVLPSFESTCILKDKEIISVKRKGGAVIDLLEVGDETNCSEDEAIVENQHIHRGVKLLANEEFDKETGGYESESEEDEPDQP--EETVQVETASAGNAGSKKRKASRKLKSPKRKKNKYTRLEKCPVVLEDVENGVCEEQTKSCDDCTALPKKGSLKKHKSSNVNGKPDKARTLNIDERSNDVDESSPNAKRCGELQENGSQGV-------EVANPPDGTQKYPSRSARRKKAKRKWLRELAKVEKKEMHQR---QSPEKEVQKNSLEHQQPDQNSDTDDAVIVPIVIRPGHIRFEPL---GKDQTIQQNPVSVETFQWNGTTSKKKGQKWGKEKMSCRRNDYKDFNQQHSETFAVEEGTPPKDPMDFDKLPSLTSSPKEGDMIAYRLIELSSTWTPELSTFRVGKISSYDPESNKLILISVPESPIVAETRIDEDASALEPDPDTSLYREDGSLEIDFSSLIDVRIIKSGNSHLEKAVTARVEAPVDTQDAVSGVKPNNKNSGMSTSLPGGELNITQVSVAGVEHNINREMTAPPPENGKVNAWDEIDKVLSAKKAQLSQEDGSSKKESPGRSPWSYKALRGSALGPTMSFLRAQN 650
BLAST of g.arboreum_cottongen_reftransV1_0013641 vs. ExPASy TrEMBL
Match: B9SVN1_RICCO (Putative uncharacterized protein OS=Ricinus communis GN=RCOM_0794230 PE=4 SV=1) HSP 1 Score: 457.603 bits (1176), Expect = 3.094e-148 Identity = 305/647 (47.14%), Postives = 417/647 (64.45%), Query Frame = 3 Query: 72 METARLRLVFEDPNILSKSQKQQGLKRSWFILKPQHQTIFDLSSDLLHIFDLQKSCPNGLILSMDGFVLPPFEPTCILKDKDIVSVKMKGGKSTEIIKAGNGMN-YLEELETMERLP-VNTGVKHLANEEFDKETGGYKSELEED-----EQELAPLEDRAQVESTPIENMVSKKRKARDKLPXXXXXXXXXXXXXXYPVSGDDGIDVRPRXXXXXXXXXXXTNDKVVGKDKPADIQGEPENSS-SPEIDETGDNKTNLG---RSSQLQNTGKGSADELITTTEVXXXXXXXXXXXXXXXXXXXEQAKLVKEKLQSKELLGKDD----EKSPAKENLKFSEECLQAISNNDVEDNVVPIVVRPGHIRFEPLEEENAEQANQYSQISVKTFQWNGITSKKKGQKWGMEK-TFLKRNDNSFSHVSSEMVDVNDKAT--VTNDMDFDKLMPYSSLPKEGDLVAYRLVELSSTWTPELCSFRVGEISHYNAESNRIMLTPVPGYPNAFEKKTDEEASELPDTSL-YGEDGSLEIDYSSLIDVRLVKLGILNATIAIADDNNEKYAQNQDVLTRQPNGSKEANSVSAASPAQANGAVNVWEEINQALSAKKAELSKEDGWSRADSSGRSAWSFRALRRSALGPTMAFLRAQN 1955 MET RLRLVF+ ILSK Q QGLKR W +LKPQHQTI DLSS LL++F+LQ CP+GL+L M+GF LP FE T ILKDKDI+ V+ GG S+EI+ G+ +N LE +E +E P V TG+ LANEEF+KE+GGY+S+ EED E+ + +E+ ++V++ +SKKRKA L S ++KK+K A A+K+ V +D ++ GE +S +P+ DE ++ L R SQ Q G S D +T+ KKLPSRSARRK+AKRRWLRE+ + +++ S+ L K + E+ P + E+ Q ++D+ED++VPIV+RPGHIRFEPL + A QA Q + I V+ F WNGITSKKKGQKWG EK T KRND+ +VS E +V V + +DF+KL Y++LPKEGD++AYRL+ELS +WTPE+ S+RVG+IS Y+ +SNR+ L PVPGYP K+T ++AS P ++ Y +DGSL I+++SLI+VRLV G N+ ++A + ++ ++QD T G + N + AQ NG N WEEI++AL+AKKAEL++ED W++ SSGR WS++ALR SALGPTMA LRAQN Sbjct: 1 METVRLRLVFD--QILSKVQNTQGLKRCWILLKPQHQTISDLSSYLLNVFNLQNHCPHGLLLLMEGFALPGFECTSILKDKDIIRVEKNGGVSSEIVMVGDDVNNALEVVEIVETQPLVTTGMNLLANEEFEKESGGYQSDEEEDVPKQEEEAVHVVENASEVKT------ISKKRKAMKDLKSPKRKKTKSARAEKHAA---------------------------VLEDMGNNVTGEQNGTSCTPKFDERSESSKALSKAKRISQPQENGDASVDASPSTSGTKKLPSRSARRKQAKRRWLREKLRAERKEQSSQTLAEKGNNGVFEELPESGGEEPQEDDQQPDKDSDLEDDIVPIVIRPGHIRFEPLSKAGANQAEQQTHIPVEIFHWNGITSKKKGQKWGKEKATSYKRNDHR--NVSQECSEVRKDGGRPVYDRVDFEKLEFYTTLPKEGDVIAYRLIELSPSWTPEISSYRVGKISRYDMQSNRVRLVPVPGYP-VTHKETGDDASAAPSETIPYAKDGSLWIEFASLIEVRLVTRGNSNSVKSVAGEIDKVPVRDQDNRT----GCRSNNGNESHVSAQENGKGNAWEEISEALNAKKAELAQEDNWNKPGSSGRRPWSYKALRGSALGPTMALLRAQN 605 The following BLAST results are available for this feature:
BLAST of g.arboreum_cottongen_reftransV1_0013641 vs. ExPASy TrEMBL
Analysis Date: 2016-11-15 (Homology Analysis for Gossypium arboreum CottonGen RefTrans V1 vs TrEMBL) Total hits: 25
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BLAST of g.arboreum_cottongen_reftransV1_0013641 vs. ExPASy Swiss-Prot
Analysis Date: 2016-11-15 (Homology Analysis for Gossypium arboreum CottonGen RefTrans V1 vs SwissProt) Total hits: 0
InterPro
Analysis Name: InterProScan analysis for Gossypium arboreum CottonGen RefTrans V1
Date Performed: 2016-11-14
Sequences
The
following sequences are available for this feature:
contig sequence >g.arboreum_cottongen_reftransV1_0013641 ID=g.arboreum_cottongen_reftransV1_0013641; Name=g.arboreum_cottongen_reftransV1_0013641; organism=Gossypium arboreum; type=contig; length=2146bpback to top |