TMB1898, TMB1898 (genetic_marker) Gossypium hirsutum

Marker Overview
NameTMB1898
AliasTMH C48-C4
Genbank IDBV679698
TypeSSR
SpeciesGossypium hirsutum
GermplasmTM-1
Source SequenceBV679698.1
Source Typegenomic
Repeat Motif(CA)7
PCR ConditionAnnealing temperature: 55
Primer 1TMB1898_F: TTGGTTCATATTGGTTCGGTTA
Primer 2TMB1898_R: AACCACTGTTCCGACCTCAC
Product Length216
PolymorphismP_ TMB1898
ContactYu, John Z. (Zhi-Hong)
CommentPrimer data obtained in 2005-10
Contact
NameDetails
Yu, John Z. (Zhi-Hong)
Description:Cotton molecular genetics and genomics including integrative genome mapping and QTL identification from the Gossypium germplasm.
First name:John
Last name:Yu
Title:Research Geneticist
Institution:USDA-ARS
Address:2765 F&B Road, College Station, Texas 77845
Country:United States
Email:zyu@qutun.tamu.edu
Phone:1-979-260-9237
Fax:1-979-260-9333
Keywords:Cotton Molecular Genetics
Last update:6-Sep-2007
Cross References
External references for this genetic_marker
DatabaseAccession
DB:genbankBV679698
Germplasm
Stock NameType
TM-1accession
Relationships

The following sequence_feature feature(s) derives from this genetic_marker:

Feature NameUnique NameSpeciesType
BV679698.1BV679698.1Gossypium hirsutumsequence_feature


Map Positions
#Map NameLinkage GroupBinPositionLocusMapViewer
1TM-1 x 3-79, RIL (2012)AD_ch03_At.03N/A73.81TMB1898View
2DH962 x Jinmian-6, F2 (2009)AD_chUN/A32.6TMB1898View
3Yumian-1 x T586, RIL (2015)AD_ch03_At.03N/A68.1TMB1898View
4DH962 X Ji Mian 5, F2 (2015)AD_ch07_At.07N/A7.11TMB1898View
5TM-1 x 3-79, RIL (2014)AD_ch03_At.03N/A42.6TMB1898View
6DH962 x Ji Mian 5, RIL (2015)AD_ch03_At.03N/A0TMB1898View
7TM-1 x 3-79, RIL (2012.v3)AD_ch03_At.03N/A42.56TMB1898View
Sequence
>TMB1898 ID=TMB1898; Name=TMB1898; organism=Gossypium hirsutum; type=genetic_marker; length=216bp
TTGGTTCATATTGGTTCGGTTATAAGTGACATTTAATAGGTGTAACATAT
ATATGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTTTGGTGTTCAAA
TTTATGAATTTGCCCATTTTGTATGTTTATTTAGGTATTGTATTAAAGCA
AGTTTATGGGACTGTTTCGGTAAGTTGATGTAACTGCCCAATTTTTGTGA
GGTCGGAACAGTGGTT