TMB1484, TMB1484 (genetic_marker) Gossypium hirsutum

Marker Overview
NameTMB1484
AliasTMH B58-P14
Genbank IDBV679935
TypeSSR
SpeciesGossypium hirsutum
GermplasmTM-1
Source Sequencereverse_complement_BV679935.1
Source Typegenomic
Repeat Motif(CA)18
PCR ConditionAnnealing temperature: 55
Primer 1TMB1484_F: ACCACCCCAATTTGATGATT
Primer 2TMB1484_R: GGGTTTCTCCTTCCCTGTTC
Product Length240
PolymorphismP_ TMB1484
ContactYu, John Z. (Zhi-Hong)
CommentPrimer data obtained in 2005-10
Contact
NameDetails
Yu, John Z. (Zhi-Hong)
Description:Cotton molecular genetics and genomics including integrative genome mapping and QTL identification from the Gossypium germplasm.
First name:John
Last name:Yu
Title:Research Geneticist
Institution:USDA-ARS
Address:2765 F&B Road, College Station, Texas 77845
Country:United States
Email:zyu@qutun.tamu.edu
Phone:1-979-260-9237
Fax:1-979-260-9333
Keywords:Cotton Molecular Genetics
Last update:6-Sep-2007
Cross References
External references for this genetic_marker
DatabaseAccession
DB:genbankBV679935
Germplasm
Stock NameType
TM-1accession
Relationships

The following sequence_feature feature(s) derives from this genetic_marker:

Feature NameUnique NameSpeciesType
reverse_complement_BV679935.1reverse_complement_BV679935.1Gossypium hirsutumsequence_feature


Map Positions
#Map NameLinkage GroupBinPositionLocusMapViewer
1CCRI-36 x Hai-7124, F2 (2007)AD_ch06_At.06N/A75.3TMHB58View
2AD-genome wide Reference Map (2009)AD_ch06_At.06N/A73tmb1484View
3TM-1 x 3-79, RIL (2012)AD_ch06_At.06N/A58.25tmb1484View
4TM-1 x 3-79, RIL (2014)AD_ch06_At.06N/A58.2tmb1484View
5CCRI 12-4 x (AD)5-7, F2 (2015)AD_ch06_At.06N/A77.3tmb1484View
6TM-1 x 3-79, RIL (2012.v3)AD_ch06_At.06N/A58.25TMB1484View
Sequence
>TMB1484 ID=TMB1484; Name=TMB1484; organism=Gossypium hirsutum; type=genetic_marker; length=240bp
ACCACCCCAATTTGATGATTAAAACTATTTTTTTGGATGTGTAAACAATT
AACTTTGATGATTTTTATCTTTATTTTTGTGCAAGAGTAGGATAGTATTA
ACAGATGTATGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTACGT
ATGATTTGTTTTTAAATTTTCTATGCAAGAATCCTACATTGGGAGAGCAC
TATATTTACAAGCTTTAAATGAACAGGGAAGGAGAAACCC