TMB1288, TMB1288 (genetic_marker) Gossypium hirsutum

Marker Overview
NameTMB1288
AliasTMH B26-C4
Genbank IDBV679929
TypeSSR
SpeciesGossypium hirsutum
GermplasmTM-1
Source Sequencereverse_complement_BV679929.1
Source Typegenomic
Repeat Motif(CA)40
PCR ConditionAnnealing temperature: 55
Primer 1TMB1288_F: TCTTTGGCGGATACCTTCAC
Primer 2TMB1288_R: TAAAGCCAACCAATAAGATAAGT
Product Length165
PolymorphismP_ TMB1288
ContactYu, John Z. (Zhi-Hong)
CommentPrimer data obtained in 2005-10
Contact
NameDetails
Yu, John Z. (Zhi-Hong)
Description:Cotton molecular genetics and genomics including integrative genome mapping and QTL identification from the Gossypium germplasm.
First name:John
Last name:Yu
Title:Research Geneticist
Institution:USDA-ARS
Address:2765 F&B Road, College Station, Texas 77845
Country:United States
Email:zyu@qutun.tamu.edu
Phone:1-979-260-9237
Fax:1-979-260-9333
Keywords:Cotton Molecular Genetics
Last update:6-Sep-2007
Cross References
External references for this genetic_marker
DatabaseAccession
DB:genbankBV679929
Germplasm
Stock NameType
TM-1accession
Relationships

The following sequence_feature feature(s) derives from this genetic_marker:

Feature NameUnique NameSpeciesType
reverse_complement_BV679929.1reverse_complement_BV679929.1Gossypium hirsutumsequence_feature


Map Positions
#Map NameLinkage GroupBinPositionLocusMapViewer
1CCRI-36 x Hai-7124, F2 (2007)AD_ch10_At.10N/A21.8TMHB26View
2Deltapine-61 x Texas-701, F2 (2007)AD_ch10_At.10N/A22.2TMB1288-119View
3AD-genome wide Reference Map (2009)AD_ch10_At.10N/A36tmb1288View
4TM-1 x 3-79, RIL (2012)AD_ch10_At.10N/A75.73tmb1288View
5Yumian-1 x T586, RIL (2006)AD_ch10_At.10N/A78.8tmb1288View
6Yumian-1 x T586, RIL (2015)AD_ch10_At.10N/A62.4tmb1288View
7TM-1 x 3-79, RIL (2014)AD_ch10_At.10N/A80.4tmb1288View
8CCRI 12-4 x (AD)5-7, F2 (2015)AD_ch10_At.10N/A98.5tmb1288View
9Yumian-1 x T586, RIL (2009)AD_ch10_At.10N/A78.8TMB1288/130tView
10TM-1 x 3-79, RIL (2012.v3)AD_ch10_At.10N/A80.35TMB1288View
11901-001 x sGK156, F2 (2019)AD_ch10_At.10N/A13.51TMB1288aView
12901-001 x sGK156, F2 (2019)AD_ch10_At.10N/A16.77TMB1288bView
Sequence
>TMB1288 ID=TMB1288; Name=TMB1288; organism=Gossypium hirsutum; type=genetic_marker; length=165bp
TCTTTGGCGGATACCTTCACATCGTCAGACACACACACACACACACACAC
ACACACACACACACACTACACACACTACTACTACTACACATAGTATAGTA
CTCTATGTGCTACTTACTCTATACTTAATGAATCATCTCTTAACTTATCT
TATTGGTTGGCTTTA