TMB0403, TMB0403 (genetic_marker) Gossypium hirsutum

Marker Overview
NameTMB0403
AliasTMP01
Genbank IDBV679356
TypeSSR
SpeciesGossypium hirsutum
GermplasmTM-1
Source SequenceBV679356.1
Source Typegenomic
Repeat Motif(TA)7+(CA)12
PCR ConditionAnnealing temperature: 55
Primer 1TMB0403_F: TAGACGTTCCAGTCCGTTCG
Primer 2TMB0403_R: TTGTACCTTGTCCCGGTCTC
Product Length195
ContactYu, John Z. (Zhi-Hong)
CommentPrimer data obtained in 2005-10
Contact
NameDetails
Yu, John Z. (Zhi-Hong)
Description:Cotton molecular genetics and genomics including integrative genome mapping and QTL identification from the Gossypium germplasm.
First name:John
Last name:Yu
Title:Research Geneticist
Institution:USDA-ARS
Address:2765 F&B Road, College Station, Texas 77845
Country:United States
Email:zyu@qutun.tamu.edu
Phone:1-979-260-9237
Fax:1-979-260-9333
Keywords:Cotton Molecular Genetics
Last update:6-Sep-2007
Cross References
External references for this genetic_marker
DatabaseAccession
DB:genbankBV679356
Germplasm
Stock NameType
TM-1accession
Relationships

The following sequence_feature feature(s) derives from this genetic_marker:

Feature NameUnique NameSpeciesType
BV679356.1BV679356.1Gossypium hirsutumsequence_feature


Map Positions
#Map NameLinkage GroupBinPositionLocusMapViewer
1CCRI-36 x Hai-7124, F2 (2007)AD_ch13_At.13N/A87.4TMP01View
2H18 x TM-1, F2 (2005)AD_ch13_At.13N/A80.7TMP01View
3TM-1 x (TX-0256 + TX-1046), CSIL (2016)AD_ch13_At.13N/A56.5TMP01View
4TM-1 x 3-79, RIL (2012)AD_ch13_At.13N/A68.26tmb0403View
5AD-genome wide Reference Map (2009)AD_ch13_At.13N/A113tmb0403View
6Yumian-1 x T586, RIL (2006)AD_ch13_At.13N/A47.8tmb0403View
7DH962 x Jinmian-6, F2 (2009)AD_ch13_At.13N/A88.4tmb0403View
8DH962 x Jinmian-6, F2 (2009)AD_ch13_At.13N/A88.4tmb0403View
9Yumian-1 x T586, RIL (2015)AD_ch13_At.13N/A55.9tmb0403View
10DH962 X Ji Mian 5, F2 (2015)AD_ch13_At.13N/A32.26tmb0403View
11TM-1 x 3-79, RIL (2014)AD_ch13_At.13N/A64.9tmb0403View
12DH962 x Ji Mian 5, RIL (2015)AD_ch13_At.13N/A16.4tmb0403View
13TM-1 x Hai-7124, BC1 (2008)AD_ch13_At.13N/A63.3TMP01-200View
14Vsg x (TM-1 x Hai-7124), DH (2005)AD_ch13_At.13N/A36.1TMP01-200View
15TM-1 x Hai-7124, BC1 (2007)AD_ch13_At.13N/A63.2TMP01-200View
16TM-1 x Hai-7124, BC1 (2012)AD_ch13_At.13N/A79.3TMP01-200View
17Yumian-1 x T586, RIL (2009)AD_ch13_At.13N/A34.9TMB0403/195y(C13)View
18TM-1 x 3-79, RIL (2012.v3)AD_ch13_At.13N/A64.91TMB0403View
Sequence
>TMB0403 ID=TMB0403; Name=TMB0403; organism=Gossypium hirsutum; type=genetic_marker; length=195bp
TAGACGTTCCAGTCCGTTCGTGTTAGTACGAGGTAAGTTTATAAGTAAAT
AAATGTTGTTAAATTGAAATGTATGTACATTATATGTGCTAAATTGAGTT
GTAAAGAAATATATATATATATATGTGTGTGTGTGTGTGTGTGTGTGACT
ATTGTAACACCCCTTACCCGTACTCGAGACCGGGACAAGGTACAA