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Marker Overview
Name | TMB0403 |
Alias | TMP01
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Genbank ID | BV679356 |
Type | SSR |
Species | Gossypium hirsutum |
Germplasm | TM-1 |
Source Sequence | BV679356.1
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Source Type | genomic |
Repeat Motif | (TA)7+(CA)12 |
PCR Condition | Annealing temperature: 55 |
Primer 1 | TMB0403_F: TAGACGTTCCAGTCCGTTCG |
Primer 2 | TMB0403_R: TTGTACCTTGTCCCGGTCTC |
Product Length | 195 |
Contact | Yu, John Z. (Zhi-Hong)
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Comment | Primer data obtained in 2005-10 |
Cross References
External references for this genetic_marker
Alignments
The following features are aligned
Germplasm
Stock Name | Type |
TM-1 | accession |
Relationships
The following sequence_feature feature(s) derives from this genetic_marker:
Map Positions
# | Map Name | Linkage Group | Bin | Position | Locus | MapViewer |
1 | CCRI-36 x Hai-7124, F2 (2007) | AD_ch13_At.13 | N/A | 87.4 | TMP01 | View |
2 | H18 x TM-1, F2 (2005) | AD_ch13_At.13 | N/A | 80.7 | TMP01 | View |
3 | TM-1 x (TX-0256 + TX-1046), CSIL (2016) | AD_ch13_At.13 | N/A | 56.5 | TMP01 | View |
4 | TM-1 x 3-79, RIL (2012) | AD_ch13_At.13 | N/A | 68.26 | tmb0403 | View |
5 | AD-genome wide Reference Map (2009) | AD_ch13_At.13 | N/A | 113 | tmb0403 | View |
6 | Yumian-1 x T586, RIL (2006) | AD_ch13_At.13 | N/A | 47.8 | tmb0403 | View |
7 | DH962 x Jinmian-6, F2 (2009) | AD_ch13_At.13 | N/A | 88.4 | tmb0403 | View |
8 | DH962 x Jinmian-6, F2 (2009) | AD_ch13_At.13 | N/A | 88.4 | tmb0403 | View |
9 | Yumian-1 x T586, RIL (2015) | AD_ch13_At.13 | N/A | 55.9 | tmb0403 | View |
10 | DH962 X Ji Mian 5, F2 (2015) | AD_ch13_At.13 | N/A | 32.26 | tmb0403 | View |
11 | TM-1 x 3-79, RIL (2014) | AD_ch13_At.13 | N/A | 64.9 | tmb0403 | View |
12 | DH962 x Ji Mian 5, RIL (2015) | AD_ch13_At.13 | N/A | 16.4 | tmb0403 | View |
13 | TM-1 x Hai-7124, BC1 (2008) | AD_ch13_At.13 | N/A | 63.3 | TMP01-200 | View |
14 | Vsg x (TM-1 x Hai-7124), DH (2005) | AD_ch13_At.13 | N/A | 36.1 | TMP01-200 | View |
15 | TM-1 x Hai-7124, BC1 (2007) | AD_ch13_At.13 | N/A | 63.2 | TMP01-200 | View |
16 | TM-1 x Hai-7124, BC1 (2012) | AD_ch13_At.13 | N/A | 79.3 | TMP01-200 | View |
17 | Yumian-1 x T586, RIL (2009) | AD_ch13_At.13 | N/A | 34.9 | TMB0403/195y(C13) | View |
18 | TM-1 x 3-79, RIL (2012.v3) | AD_ch13_At.13 | N/A | 64.91 | TMB0403 | View |
Sequence
>TMB0403 ID=TMB0403; Name=TMB0403; organism=Gossypium hirsutum; type=genetic_marker; length=195bp TAGACGTTCCAGTCCGTTCGTGTTAGTACGAGGTAAGTTTATAAGTAAAT AAATGTTGTTAAATTGAAATGTATGTACATTATATGTGCTAAATTGAGTT GTAAAGAAATATATATATATATATGTGTGTGTGTGTGTGTGTGTGTGACT ATTGTAACACCCCTTACCCGTACTCGAGACCGGGACAAGGTACAA
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