TMB0327, TMB0327 (genetic_marker) Gossypium hirsutum

Marker Overview
NameTMB0327
AliasTME12
Genbank IDBV679341
TypeSSR
SpeciesGossypium hirsutum
GermplasmTM-1
Source SequenceBV679341.1
Source Typegenomic
Repeat Motif(GAA)8
PCR ConditionAnnealing temperature: 55
Primer 1TMB0327_F: GCAATGTCTTTTTCGATTGC
Primer 2TMB0327_R: CCATGAGTGCAAGAAGGCTTA
Product Length148
ContactYu, John Z. (Zhi-Hong)
CommentPrimer data obtained in 2005-10
Contact
NameDetails
Yu, John Z. (Zhi-Hong)
Description:Cotton molecular genetics and genomics including integrative genome mapping and QTL identification from the Gossypium germplasm.
First name:John
Last name:Yu
Title:Research Geneticist
Institution:USDA-ARS
Address:2765 F&B Road, College Station, Texas 77845
Country:United States
Email:zyu@qutun.tamu.edu
Phone:1-979-260-9237
Fax:1-979-260-9333
Keywords:Cotton Molecular Genetics
Last update:6-Sep-2007
Cross References
External references for this genetic_marker
DatabaseAccession
DB:genbankBV679341
Germplasm
Stock NameType
TM-1accession
Relationships

The following sequence_feature feature(s) derives from this genetic_marker:

Feature NameUnique NameSpeciesType
BV679341.1BV679341.1Gossypium hirsutumsequence_feature


Map Positions
#Map NameLinkage GroupBinPositionLocusMapViewer
1(SM3 x SM12) x (X4133 x 8891), 4WC (2008)AD_ch12_At.12N/A0TME12View
2HS427-10 x TM-1, F2:3 (2005)AD_ch12_At.12N/A0TME12View
3TM-1 x 3-79, RIL (2012)AD_ch12_At.12N/A48.67tmb0327View
4Yumian-1 x T586, F2:7 (2008)AD_ch12_At.12N/A0tmb0327View
5AD-genome wide Reference Map (2009)AD_ch12_At.12N/A192tmb0327View
6Yumian-1 x T586, RIL (2006)AD_ch12_At.12N/A11tmb0327View
7(YM1 x CCRI35) x (YM1 x 7235), 4WC (2012)AD_ch12_At.12N/A120tmb0327View
8Yumian-1 x T586, RIL (2015)AD_ch12_At.12N/A31.9tmb0327View
9Yumian-1 x 7235, RIL (2015)AD_ch12_At.12N/A95.4tmb0327View
10TM-1 x 3-79, RIL (2014)AD_ch12_At.12N/A48.7tmb0327View
11GX1135 x VGX100-2, RIL (2016)AD_ch12_At.12N/A50.7tmb0327View
12TM-1 x Hai-7124, BC1 (2007)AD_ch12_At.12N/A25.8TME12-150View
13TM-1 x Hai-7124, BC1 (2008)AD_ch12_At.12N/A60.03TME12-150View
14Vsg x (TM-1 x Hai-7124), DH (2005)AD_ch12_At.12N/A18.5TME12-150View
15TM-1 x Hai-7124, BC1 (2012)AD_ch12_At.12N/A63.7TME12-150View
16Yumian-1 x T586, RIL (2009)AD_ch12_At.12N/A0TMB0327/170y(C12)View
17TM-1 x 3-79, RIL (2012.v3)AD_ch12_At.12N/A48.67TMB0327View
Sequence
>TMB0327 ID=TMB0327; Name=TMB0327; organism=Gossypium hirsutum; type=genetic_marker; length=148bp
GCAATGTCTTTTTCGATTGCTCCGAAGAAGAAGAAGAAGAAGAAGAAGTT
CAAGAAAGCTTTGCATGAGGTGGTAAATATGAGATTCAATTTTGGAAAGT
AGAGAATTTTATAAGCTGGTAAGCCTTTAAGCCTTCTTGCACTCATGG