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Marker Overview
| Name | TMB0283 |
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| Alias | TMJ24
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| Genbank ID | BV679332 |
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| Type | SSR |
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| Species | Gossypium hirsutum |
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| Germplasm | TM-1 |
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| Source Sequence | BV679332.1
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| Source Type | genomic |
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| Repeat Motif | (CA)20 |
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| PCR Condition | Annealing temperature: 55 |
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| Primer 1 | TMB0283_F: GGCTCCAAAATTGAAACGTG |
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| Primer 2 | TMB0283_R: GTGGACATTGGCATTCATTG |
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| Product Length | 191 |
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| Polymorphism | P_ TMB0283 |
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| Contact | Yu, John Z. (Zhi-Hong)
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| Comment | Primer data obtained in 2005-10 |
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Cross References
External references for this genetic_marker
Alignments
The following features are aligned
Germplasm
| Stock Name | Type |
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| TM-1 | accession |
Relationships
The following sequence_feature feature(s) derives from this genetic_marker:
Map Positions
| # | Map Name | Linkage Group | Bin | Position | Locus | MapViewer |
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| 1 | 7235 x TM-1, RIL (2007) | AD_ch15_Dt.01 | N/A | 41.5 | TMJ24a | View |
| 2 | 7235 x TM-1, RIL (2007) | AD_ch15_Dt.01 | N/A | 41.5 | TMJ24b | View |
| 3 | JLZM x ZJXSLS, F2 (2008) | A_JZ_A01 | N/A | 108.4 | TMJ24 | View |
| 4 | 7235 x TM-1, F2:3 (2005) | AD_ch15_Dt.01 | N/A | 71.5 | TMJ24 | View |
| 5 | AD-genome wide Reference Map (2009) | AD_ch01_At.01 | N/A | 137 | tmb0283 | View |
| 6 | AD-genome wide Reference Map (2009) | AD_ch15_Dt.01 | N/A | 149 | tmb0283 | View |
| 7 | CCRI 12-4 x (AD)5-7, F2 (2015) | AD_ch01_At.01 | N/A | 37.9 | tmb0283 | View |
| 8 | CCRI 12-4 x (AD)5-7, F2 (2015) | AD_ch15_Dt.01 | N/A | 138.7 | tmb0283 | View |
| 9 | TM-1 x 3-79, RIL (2012) | AD_ch01_At.01 | N/A | 38.98 | TMB0283b | View |
| 10 | TM-1 x 3-79, RIL (2014) | AD_ch01_At.01 | N/A | 105.4 | TMB0283b | View |
| 11 | TM-1 x 3-79, RIL (2012) | AD_ch15_Dt.01 | N/A | 44.69 | TMB0283a | View |
| 12 | TM-1 x 3-79, RIL (2014) | AD_ch15_Dt.01 | N/A | 75.2 | TMB0283a | View |
| 13 | TM-1 x Hai-7124, BC1 (2007) | AD_ch01_At.01 | N/A | 55.4 | TMJ24-170 | View |
| 14 | TM-1 x Hai-7124, BC1 (2008) | AD_ch01_At.01 | N/A | 59.98 | TMJ24-170 | View |
| 15 | TM-1 x Hai-7124, BC1 (2012) | AD_ch01_At.01 | N/A | 74.2 | TMJ24-170 | View |
| 16 | Vsg x (TM-1 x Hai-7124), DH (2005) | AD_ch01_At.01 | N/A | 55.2 | TMJ240-170 | View |
| 17 | Vsg x (TM-1 x Hai-7124), DH (2005) | AD_ch01_At.01 | N/A | 61.7 | TMJ240-190 | View |
| 18 | CCRI 12-4 x (AD)5-7, F2 (2015) | AD_ch01_At.01 | N/A | 106 | TMB0283 | View |
| 19 | TM-1 x 3-79, RIL (2012.v3) | AD_ch01_At.01 | N/A | 105.4 | TMB0283b | View |
| 20 | TM-1 x 3-79, RIL (2012.v3) | AD_ch15_Dt.01 | N/A | 75.21 | TMB0283a | View |
Sequence
>TMB0283 ID=TMB0283; Name=TMB0283; organism=Gossypium hirsutum; type=genetic_marker; length=191bp
GGCTCCAAAATTGAAACGTGTTCCAACTCAACTAATATGCGCATACACAC
ACACACACACACACACACACACACACACACACACATCTATATCTATATCT
ATATCTATATCTATATCTATATCTATATTGCGAGACATTTTACAAACTGT
AAGACTTAGAGGCAAAGTCGGCAATGAATGCCAATGTCCAC
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