STV0030, STV0030 (genetic_marker) Gossypium hirsutum

Marker Overview
NameSTV0030
AliasSTV030
STV_Contig_1406a
Genbank IDDT545391
TypeSSR
SpeciesGossypium hirsutum
GermplasmTM-1
Source SequenceSTV_Contig_1406
Source TypeEST
Repeat MotifTCT
Primer 1STV030_F: ACGAGGGATTCATGTGGCTTAAA
Primer 2STV030_R: ACACCCTTCACCTTCAAAACTCAA
Restriction EnzymeEcoRI; NotI
PolymorphismP_ STV0030
Publication[view all]
ContactScheffler, Jodi A.
CommentPrimer data obtained in 2006
Contact
NameDetails
Scheffler, Jodi A.
First name:Jodi
Last name:Scheffler
Title:Research Geneticist
Institution:USDA-ARS
Address:141 Experiment Station Road, Stoneville, Mississippi 38776
Country:United States
Email:jodi.Scheffler@usda.gov
Phone:+001 662 686-5219
Keywords:Cotton Geneticist
Last update:20-Feb-2007
Cross References
External references for this genetic_marker
DatabaseAccession
DB:genbankDT545391
Germplasm
Stock NameType
TM-1accession
Relationships

The following sequence_feature feature(s) derives from this genetic_marker:

Feature NameUnique NameSpeciesType
STV_Contig_1406STV_Contig_1406Gossypium hirsutumsequence_feature


Map Positions
#Map NameLinkage GroupBinPositionLocusMapViewer
1(SM3 x SM12) x (X4133 x 8891), 4WC (2008)AD_ch14_Dt.02N/A11.4STV030View
2TM-1 x 3-79, RIL (2012)AD_ch14_Dt.02N/A112.81STV030View
3Emian-22 x 3-79, BC1 (2011)AD_ch14_Dt.02N/A86.25STV030View
4DH962 X Ji Mian 5, F2 (2015)AD_ch14_Dt.02N/A8.28STV030View
5TM-1 x 3-79, RIL (2014)AD_ch14_Dt.02N/A13.6STV030View
6DH962 x Ji Mian 5, RIL (2015)AD_ch14_Dt.02N/A5STV030View
7TM-1 x Hai-7124, BC1 (2008)AD_ch14_Dt.02N/A90.38STV030-125View
8TM-1 x Hai-7124, BC1 (2012)AD_ch14_Dt.02N/A22.3STV030-125View
9DH962 x Jinmian-6, F2 (2009)AD_ch14_Dt.02N/A7.6STV30View
10DH962 x Jinmian-6, F2 (2009)AD_ch14_Dt.02N/A7.6STV30View
11TM-1 x 3-79, RIL (2012.v3)AD_ch14_Dt.02N/A13.61STV030View
12PD 94042 x (AD)4-08, F2 (2016)AD_ch14_Dt.02N/A160.6STV030View
Sequence
>STV0030 ID=STV0030; Name=STV0030; organism=Gossypium hirsutum; type=genetic_marker; length=134bp
ACGAGGGATTCATGTGGCTTAAACTAGATGAGTCTTCTTCTTCTTCTTCT
TCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCAAGTGATATTGTCAAAAG
AGTTGATTTCTTGAGTTTTGAAGGTGAAGGGTGT