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Marker Overview
| Name | NBRI_gC111 |
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| Genbank ID | HQ524367 |
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| Type | SSR |
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| Species | Gossypium herbaceum |
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| Germplasm | Vagad |
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| Source Type | genomic |
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| Repeat Motif | (TTC)5…(TTC)25 |
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| PCR Condition | Annealing temperature: 50 |
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| Primer 1 | NBRI_gC111_F: TTGCAGTAAAATTGGGCTTTC |
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| Primer 2 | NBRI_gC111_R: GCTCGTGAAGTGTTCTTTCTG |
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| Product Length | 284 |
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| Publication | [view all] |
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| Comment | Compound Imperfect; Primer data obtained in 2012 |
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Cross References
External references for this genetic_marker
Alignments
The following features are aligned
Publications
| Year | Publication |
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| 2012 | Jena SN, Srivastava A, Rai KM, Ranjan A, Singh SK, Nisar T, Srivastava M, Bag SK, Mantri S, Asif MH, Yadav HK, Tuli R, Sawant SV. Development and characterization of genomic and expressed SSRs for levant cotton (Gossypium herbaceum L.). TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik. 2012 Feb; 124(3):565-76 |
Germplasm
| Stock Name | Type |
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| Vagad | accession |
Sequence
>NBRI_gC111 ID=NBRI_gC111; Name=NBRI_gC111; organism=Gossypium herbaceum; type=genetic_marker; length=284bp
TTGCAGTAAAATTGGGCTTTCAAATTTGTTATATAAATTCGTTGTTTTAA
TGCGCACGCGCGCAACTGGTCAATTGGCTTCTTTTTCTTCTTCTTCTTCT
TTTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTC
TTCTTCTTCTTCTTCTTCTTCTTCTTCTTATGTCTCTTAAATATCTCTAT
GTGATATGCCAAATATGTTAATACTTCAATCTTTTGCATTGGGAAAAGTT
CAACAAAAAGGTGCAGAAAGAACACTTCACGAGC
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