NAU5433, NAU5433 (genetic_marker) Gossypium hirsutum

Marker Overview
NameNAU5433
Genbank IDDR453064
TypeSSR
SpeciesGossypium hirsutum
GermplasmXuzhou 142
Xuzhou 142
Source SequenceDR453064.1
Source TypeEST
Repeat Motif(ggagca)3
PCR ConditionAnnealing temperature: 57
Primer 1NAU5433_F: CTTAGGATGGCCGAATAAAA
Primer 2NAU5433_R: CAAGTGCTCCACCACAAAT
Restriction EnzymeEcoRI; XhoI
Publication[view all]
ContactZhang, Tian-Zhen
CommentPrimer data obtained in 2007-05
Contact
NameDetails
Zhang, Tian-Zhen
First name:Tian-Zhen
Last name:Zhang
Title:Professor
Institution:Zhejiang University
Address:College of Agriculture and Biotechnology, Zhejiang University, Hangzhou , 310058 , Zhejiang , China
Country:China
Email:cotton@zju.edu.cn
Phone:+86 571 88982971
Fax:+86 571 88982971
Keywords:cotton genetics and genomics, and breeding
Last update:18-Mar-2022
Cross References
External references for this genetic_marker
DatabaseAccession
DB:genbankDR453064
Germplasm
Stock NameType
Xuzhou 142accession
Xuzhou 142accession
Relationships

The following sequence_feature feature(s) derives from this genetic_marker:

Feature NameUnique NameSpeciesType
DR453064.1DR453064.1Gossypium hirsutumsequence_feature


Map Positions
#Map NameLinkage GroupBinPositionLocusMapViewer
1(SM3 x SM12) x (X4133 x 8891), 4WC (2008)AD_ch06_At.06N/A44NAU5433View
2Emian-22 x 3-79, BC1 (2011)AD_ch06_At.06N/A98.81NAU5433View
3AD-genome wide Reference Map (2009)AD_ch06_At.06N/A181NAU5433View
4Yumian-1 x T586, RIL (2015)AD_ch06_At.06N/A63.2NAU5433View
5DH962 X Ji Mian 5, F2 (2015)AD_ch06_At.06N/A34.66NAU5433View
60-153 x sGK9708, RIL (2016)AD_ch06_At.06N/A42NAU5433View
7DH962 x Ji Mian 5, RIL (2015)AD_ch06_At.06N/A30.8NAU5433View
8SG 747 x Giza 75, BIL (2013)AD_ch06_At.06N/A66NAU5433View
9CCRI-36 x G2005, RIL (2016)AD_ch06_At.06N/A57.9NAU5433View
10TM-1 x Hai-7124, BC1 (2007)AD_ch06_At.06N/A99.4NAU5433-260View
11TM-1 x Hai-7124, BC1 (2008)AD_ch06_At.06N/A57.4NAU5433-260View
12TM-1 x Hai-7124, BC1 (2012)AD_ch06_At.06N/A55.2NAU5433-260View
13(SM3 x SM12) x (X4133 x 8891), 4WC (2008)AD_ch06_At.06N/A44NAU5433View
14PD 94042 x (AD)4-08, F2 (2016)AD_ch06_At.06N/A167.3NAU5433View
Sequence
>NAU5433 ID=NAU5433; Name=NAU5433; organism=Gossypium hirsutum; type=genetic_marker; length=223bp
CTTAGGATGGCCGAATAAAACAAAAATCTCTAGCAAGTCATTCAAGTCTA
TGAAAACTACAAACTAACCTGTGTCAAAATCACAGATACCATCACAATAA
CAAATTTTTTAAATAGGAAAAACATTTGCAAAAATAAGAAAACCTCACTC
CCAGNCCAGTGGGAGCAGGAGCAGGAGCAGATACATCGATTCCAGGGGCC
AGGGATTTGTGGTGGAGCACTTG