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Marker Overview
Name | NAU2931 |
Genbank ID | CO085347 |
Type | SSR |
Species | Gossypium raimondii |
Source Type | EST |
Repeat Motif | (cag)8 |
PCR Condition | Annealing temperature: 57 |
Primer 1 | NAU2931_F: CCGATTGGGAAACTAAGAAA |
Primer 2 | NAU2931_R: CACCTTGTTGATGATGAGGA |
Restriction Enzyme | NotI; EcoRV |
Publication | [view all] |
Contact | Zhang, Tian-Zhen
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Comment | Primer data obtained in 2007-05 |
Cross References
External references for this genetic_marker
Alignments
The following features are aligned
Publications
Year | Publication |
2007 | Guo W, Cai C, Wang C, Han Z, Song X, Wang K, Niu X, Wang C, Lu K, Shi B. A microsatellite-based, gene-rich linkage map reveals genome structure, function and evolution in Gossypium. Genetics. 2007; 176(1):527-541. |
Map Positions
# | Map Name | Linkage Group | Bin | Position | Locus | MapViewer |
1 | AD-genome wide Reference Map (2009) | AD_ch16_Dt.07 | N/A | 14 | NAU2931 | View |
2 | Emian-22 x 3-79, BC1 (2011) | AD_ch16_Dt.07 | N/A | 88.68 | NAU2931 | View |
3 | H16 x T586, F2sel (2009) | AD_ch16_Dt.07 | N/A | 19.8 | NAU2931 | View |
4 | Yumian-1 x 7235, RIL (2015) | AD_ch16_Dt.07 | N/A | 108 | NAU2931 | View |
5 | DH962 X Ji Mian 5, F2 (2015) | AD_ch07_At.07 | N/A | 107.54 | NAU2931 | View |
6 | DH962 X Ji Mian 5, F2 (2015) | AD_ch16_Dt.07 | N/A | 107.54 | NAU2931 | View |
7 | TM-1 x (TX-0256 + TX-1046), CSIL (2016) | AD_ch16_Dt.07 | N/A | 90.3 | NAU2931 | View |
8 | DH962 x Ji Mian 5, RIL (2015) | AD_ch16_Dt.07 | N/A | 0 | NAU2931 | View |
9 | CCRI 12-4 x (AD)5-7, F2 (2015) | AD_ch16_Dt.07 | N/A | 105.2 | NAU2931 | View |
10 | CCRI-35 x Yumian-1, RIL (2015) | AD_ch16_Dt.07 | N/A | 76.2 | NAU2931 | View |
11 | TM-1 x Hai-7124, BC1 (2007) | AD_ch16_Dt.07 | N/A | 47.5 | NAU2931-180 | View |
12 | TM-1 x Hai-7124, BC1 (2008) | AD_ch16_Dt.07 | N/A | 47.65 | NAU2931-180 | View |
13 | H16 x T586, F2 (2009) | AD_ch16_Dt.07 | N/A | 47.6 | NAU2931-180 | View |
14 | TM-1 x Hai-7124, BC1 (2012) | AD_ch16_Dt.07 | N/A | 82.9 | NAU2931-180 | View |
15 | CCRI-35 x Yumian-1, RIL (2017) | AD_ch16_Dt.07 | N/A | 48.85 | NAU2931 | View |
16 | MGG-293-793, MAGIC (2018) | AD_ch16_Dt.07 | N/A | 28 | NAU2931 | View |
Sequence
>NAU2931 ID=NAU2931; Name=NAU2931; organism=Gossypium raimondii; type=genetic_marker; length=180bp CCGATTGGGAAACTAAGAAAGTAAAGAAGAAAAAGAAAACACAGCAACAG CAGCAGCAGCAGCAGCAGCAGGAGCAAGAAAAGAAGAAGAAGAAGAAAAA GAAGAAAAGTAGTAAACTTGTTGTTGGCAATGAGAGCAGCAACAGCCATA AGGTGCATCATCCTCATCATCAACAAGGTG
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