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Marker Overview
Name | NAU2914 |
Genbank ID | CO084798 |
Type | SSR |
Species | Gossypium raimondii |
Source Type | EST |
Repeat Motif | (cac)7 |
PCR Condition | Annealing temperature: 57 |
Primer 1 | NAU2914_F: GAACACCATGATGAAGACCA |
Primer 2 | NAU2914_R: TCCTCTGTCTCATCCCTTTC |
Restriction Enzyme | NotI; EcoRV |
Publication | [view all] |
Contact | Zhang, Tian-Zhen
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Comment | Primer data obtained in 2007-05 |
Cross References
External references for this genetic_marker
Alignments
The following features are aligned
Publications
Year | Publication |
2007 | Guo W, Cai C, Wang C, Han Z, Song X, Wang K, Niu X, Wang C, Lu K, Shi B. A microsatellite-based, gene-rich linkage map reveals genome structure, function and evolution in Gossypium. Genetics. 2007; 176(1):527-541. |
Map Positions
# | Map Name | Linkage Group | Bin | Position | Locus | MapViewer |
1 | Emian-22 x 3-79, BC1 (2011) | AD_ch08_At.08 | N/A | 103.92 | NAU2914b | View |
2 | Emian-22 x 3-79, BC1 (2011) | AD_ch24_Dt.08 | N/A | 32.81 | NAU2914a | View |
3 | AD-genome wide Reference Map (2009) | AD_ch24_Dt.08 | N/A | 83 | nau2914 | View |
4 | AD-genome wide Reference Map (2009) | AD_ch08_At.08 | N/A | 112 | nau2914 | View |
5 | Yumian-1 x T586, RIL (2006) | AD_ch08_At.08 | N/A | 16.1 | nau2914 | View |
6 | Yumian-1 x T586, RIL (2015) | AD_ch08_At.08 | N/A | 50.5 | nau2914 | View |
7 | DH962 X Ji Mian 5, F2 (2015) | AD_ch08_At.08 | N/A | 59.18 | nau2914 | View |
8 | W10 x TM-1, F2:3 (2015) | AD_ch08_At.08 | N/A | 33 | nau2914 | View |
9 | 0-153 x sGK9708, RIL (2016) | AD_ch24_Dt.08 | N/A | 54.4 | nau2914 | View |
10 | (86-1 x G. anomalum) x Su8289, BC2F1 (2015) | ABD_Bh.08 | N/A | 106.1 | nau2914 | View |
11 | DH962 x Ji Mian 5, RIL (2015) | AD_ch08_At.08 | N/A | 29.9 | nau2914 | View |
12 | TM-1 x Hai-7124, BC1 (2007) | AD_ch08_At.08 | N/A | 58.2 | NAU2914-125 | View |
13 | TM-1 x Hai-7124, BC1 (2008) | AD_ch08_At.08 | N/A | 70.27 | NAU2914-125 | View |
14 | TM-1 x Hai-7124, BC1 (2012) | AD_ch08_At.08 | N/A | 63.2 | NAU2914-125 | View |
15 | TM-1 x Hai-7124, BC1 (2007) | AD_ch24_Dt.08 | N/A | 22.2 | NAU2914-225 | View |
16 | TM-1 x Hai-7124, BC1 (2008) | AD_ch24_Dt.08 | N/A | 88.32 | NAU2914-225 | View |
17 | TM-1 x Hai-7124, BC1 (2012) | AD_ch24_Dt.08 | N/A | 78.6 | NAU2914-225 | View |
18 | Yumian-1 x T586, RIL (2009) | AD_ch08_At.08 | N/A | 10.8 | NAU2914/140t(C8,C24) | View |
19 | PD 94042 x (AD)4-08, F2 (2016) | AD_ch08_At.08 | N/A | 144.7 | NAU2914 | View |
20 | MGG-293-793, MAGIC (2018) | AD_ch08_At.08 | N/A | 72.3 | NAU2914b | View |
Sequence
>NAU2914 ID=NAU2914; Name=NAU2914; organism=Gossypium raimondii; type=genetic_marker; length=221bp GAACACCATGATGAAGACCATGACCACGAGCACCATGATGAAGACCATGA CCAGGAGCACCATGATGAAGACCATGACCACGAGCACCATGATGAAGACC ATGACCACGAACACCATGATGAAGAGGATCATGAGGAAGAGCATCACCAC CACCACCACCACCACCATCATCACCACCGCCATCATCACCATGGAGAGGA AGAAAGGGATGAGACAGAGGA
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